NO20G01510, NO20G01510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01510 vs. NCBI_GenBank
Match: EWM22090.1 (BSD domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 151.0 bits (380), Expect = 8.100e-33 Identity = 116/351 (33.05%), Postives = 179/351 (51.00%), Query Frame = 0 Query: 14 MWRILQQDFSEFVAVVAKDSKEVLSAVMQAQDEHDDG---SSSSSRGTITITATDGLSATETDLLRLQHDPRTFTEAVNEVDKEQWVSFVGGLDLSSKATEMACLLKENKDVARMHAKLVRNEGNE---NEEGDKIDTETFWLRYFYRLDRLVRQKRGVTLPSALAGEDDEEEDLSWGXXXXXXXGKE----LKTDKPKTNEQMVDPVVATAAGVLAVVRAEKKHVEEGQQAASTSVYSFPSKIISSPQFNDHDDRTTRPQPVPLQEDVAAGDLNANESTSTNAVEAELARMQNAIRIYKTRTHEVEVDLLGWKKKCAILEGRLEKAQTKKKEITALATDSIAKLRAQQME 355 MWR QQD SEFV+VV D+KE LS+V+Q EHD+ S + + +T LSA + DLL LQ DP+T+TEA+ E DKE+W F+ L L +K E+A LL++ + VAR++ L+ ++ N G++ID ETFW RYF++++ L+R +R P L G DD EEDLSWG GK+ + P T +P A+ + + + AAS+ S +++ N++ T+ V D + + STST A+EA +Q + Y+T + + ++ K KC LE + A K+ + A + ++ L+ Q E Sbjct: 1 MWRTFQQDISEFVSVVTGDAKEALSSVLQTPSEHDNTHVMRKSCDKSNTNLHST--LSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPLNLTGGDD-EEDLSWGDEDEGVSGKKDNSADRVQAPGTEGNNTEPPGASNS-------SSPMEEPDLDHAASS---SHAQNVVADSAVNENG--LTKSNRV-THCDEEREERSDTPSTSTPALEA--PPLQAKVEKYETLINGMRKEISSLKSKCTTLERQCADAIQKEGRVVAQLSGTLTALKQSQDE 333
BLAST of NO20G01510 vs. NCBI_GenBank
Match: XP_006358434.1 (PREDICTED: BSD domain-containing protein 1 [Solanum tuberosum]) HSP 1 Score: 66.6 bits (161), Expect = 2.000e-7 Identity = 46/158 (29.11%), Postives = 81/158 (51.27%), Query Frame = 0 Query: 29 VAKDSKEVLSAVMQAQDEHDDGSSSSSRGTITITATDGLSATETDLLRLQHDPRTFTEAVNEVDKEQWVSFVGGLDLSSKATEMACLLKENKDVARMHAKLVRNEGNENEEGDKIDTETFWLRYFYRLDRLVRQK--RGVTLPSALAGEDDEEEDLSW 185 + K+ L A A+ E D + + + G S E+ L+ +Q DP TF ++ D E++ + +L K+ E+ L++EN+ + ++ ++V NE +D ETFW RYFY++ +L +Q+ R + A+A D+EE+LSW Sbjct: 134 IISQGKDTLLASSDAEPETPDANRTLNSGR--------YSRFESQLMNIQSDPNTF--CMDPEDLEEYKKWKSEFELKEKSKEVEILIEENESLEGIYKRVVPNE---------VDNETFWCRYFYKVYKLKQQESVRANLVKRAIA--IDDEEELSW 270
BLAST of NO20G01510 vs. NCBI_GenBank
Match: XP_015088175.1 (PREDICTED: BSD domain-containing protein 1 [Solanum pennellii]) HSP 1 Score: 65.9 bits (159), Expect = 3.400e-7 Identity = 48/178 (26.97%), Postives = 82/178 (46.07%), Query Frame = 0 Query: 29 VAKDSKEVLSAVMQAQDEHDDGSSSSSRGTITITATDGLSATETDLLRLQHDPRTFTEAVNEVDKEQWVSFVGGLDLSSKATEMACLLKENKDVARMHAKLVRNEGNENEEGDKIDTETFWLRYFYRLDRLVRQKRGVTLPSALAGEDDEEEDLSWGXXXXXXXGKELKTDKPKTNEQ 207 + K+ L A A+ E D + + + G S E+ L+ +Q DP TF V+ D E++ + DL + E+ L++EN + ++ ++V NE +D ETFW RYFY++ +L +Q+ A D+EE+LSW ++ K K +E+ Sbjct: 134 IISQGKDTLLASSDAESETPDANRTLNSGR--------YSRFESQLMNIQSDPNTF--CVDPEDLEEYNKWKSEFDLKENSKEVEILIEENGSLEGIYKRVVPNE---------VDNETFWCRYFYKVYKLKQQESVRANLVKRAISIDDEEELSWDVDDEDDNNEQENIAKSKFDEK 292
BLAST of NO20G01510 vs. NCBI_GenBank
Match: XP_013637329.1 (PREDICTED: BSD domain-containing protein 1 [Brassica oleracea var. oleracea]) HSP 1 Score: 65.1 bits (157), Expect = 5.800e-7 Identity = 57/196 (29.08%), Postives = 91/196 (46.43%), Query Frame = 0 Query: 20 QDFSEFVAVVAKDSKEVLS----AVMQAQDEHDDGSSSSSRGTITITATDGLSATETDLLRLQHDPRTFTEAVNEVDK-EQWVSFVGGLDLSSKATEMACLLKENKDVARMHAKLVRNEGNENEEGDKIDTETFWLRYFYRLDRL--VRQKRGVTLPSALAGEDDEEEDLSWGXXXXXXXGKELKTDKPKTNEQMV 209 Q + V K + +++S +++ + H D SS RG + S E LL +Q D T+ +++ + E+W G L K +A L+ N+ V M+ KLV E +D ETFW RY+Y++ +L V + R + A++GE EEEDLSW G E + D+ + E +V Sbjct: 144 QAIDDIGGAVWKSTAKIISRGKDSLLSSSSSHPD--SSGDRGYHQALSVKPYSRFEMQLLAIQSDKATYVREPDDLGEFEKWSL---GFKLEEKGDVIADLINGNEGVKEMYVKLVPME---------VDAETFWRRYYYKVHKLEEVEEARVKLVKRAISGE--EEEDLSW-DLDDEGDGTEAEKDRKISEENVV 322
BLAST of NO20G01510 vs. NCBI_GenBank
Match: XP_013732612.1 (BSD domain-containing protein 1-like [Brassica napus]) HSP 1 Score: 65.1 bits (157), Expect = 5.800e-7 Identity = 57/196 (29.08%), Postives = 91/196 (46.43%), Query Frame = 0 Query: 20 QDFSEFVAVVAKDSKEVLS----AVMQAQDEHDDGSSSSSRGTITITATDGLSATETDLLRLQHDPRTFTEAVNEVDK-EQWVSFVGGLDLSSKATEMACLLKENKDVARMHAKLVRNEGNENEEGDKIDTETFWLRYFYRLDRL--VRQKRGVTLPSALAGEDDEEEDLSWGXXXXXXXGKELKTDKPKTNEQMV 209 Q + V K + +++S +++ + H D SS RG + S E LL +Q D T+ +++ + E+W G L K +A L+ N+ V M+ KLV E +D ETFW RY+Y++ +L V + R + A++GE EEEDLSW G E + D+ + E +V Sbjct: 144 QAIDDIGGAVWKSTAKIISRGKDSLLSSSSSHPD--SSGDRGYHQALSVKPYSRFEMQLLAIQSDKATYVREPDDLGEFEKWSL---GFKLEEKGDVIADLINGNEGVKEMYVKLVPME---------VDAETFWRRYYYKVHKLEEVEEARVKLVKRAISGE--EEEDLSW-DLDDEGDGTEAEKDRKISEENVV 322
BLAST of NO20G01510 vs. NCBI_GenBank
Match: XP_004247485.1 (PREDICTED: BSD domain-containing protein 1 [Solanum lycopersicum]) HSP 1 Score: 64.7 bits (156), Expect = 7.600e-7 Identity = 45/156 (28.85%), Postives = 74/156 (47.44%), Query Frame = 0 Query: 29 VAKDSKEVLSAVMQAQDEHDDGSSSSSRGTITITATDGLSATETDLLRLQHDPRTFTEAVNEVDKEQWVSFVGGLDLSSKATEMACLLKENKDVARMHAKLVRNEGNENEEGDKIDTETFWLRYFYRLDRLVRQKRGVTLPSALAGEDDEEEDLSW 185 + K+ L A A+ E D + + + G S E+ L+ +Q DP TF V+ D E++ + DL + E+ L++EN + + ++V NE +D ETFW RYFY++ +L +Q+ A D+EE+LSW Sbjct: 133 IISQGKDTLLASSDAESETPDANQTLNSGR--------YSRFESQLMNIQSDPNTF--CVDPEDLEEYKKWKSEFDLKENSKEVEILIEENGSLEGIFKRVVPNE---------VDNETFWCRYFYKVYKLKQQESVRANLVKRAISIDDEEELSW 269
BLAST of NO20G01510 vs. NCBI_GenBank
Match: XP_021891371.1 (BSD domain-containing protein 1-A [Carica papaya]) HSP 1 Score: 64.7 bits (156), Expect = 7.600e-7 Identity = 52/169 (30.77%), Postives = 87/169 (51.48%), Query Frame = 0 Query: 24 EFVAVVAKDSKEVLS----AVMQAQDEHD--DGSSSSSRGTITITATDGLSATETDLLRLQHDPRTFTEAVNEVDKEQWVSFVGGLDLSSKATEMACLLKENKDVARMHAKLVRNEGNENEEGDKIDTETFWLRYFYRLDRLVRQK--RGVTLPSALAGEDDEEEDLSW 185 EF + V K + +++S A++ A +E D D +SS + G ++ S E+ + +Q D T+ E +V E++ + G L K EM LL+EN + ++ K+V N +D ETFW RYFY++ +L + + R + A++ E EEE+LSW Sbjct: 109 EFGSTVLKGTAQIISQGKDAILAADNESDSSDTNSSKNHGAHRSLSSKRYSRFESQISAIQGDANTYCEEPEDV--EEYRKWKLGFVLDEKREEMKRLLEENGSMESVYNKVVPN---------TVDQETFWSRYFYKVHKLKQAEDVRANLVKRAISRE--EEEELSW 264
BLAST of NO20G01510 vs. NCBI_GenBank
Match: XP_004148869.1 (PREDICTED: BSD domain-containing protein 1 [Cucumis sativus] >KGN44859.1 hypothetical protein Csa_7G392320 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 9.900e-7 Identity = 53/172 (30.81%), Postives = 90/172 (52.33%), Query Frame = 0 Query: 22 FSEFVAVVAKDSKEVLSA---VMQAQDEHDDGSSSSSRGTITITATDG--LSATETDLLRLQHDPRTFTEAVNEV-DKEQWVS-FVGGLDLSSKATEMACLLKENKDVARMHAKLVRNEGNENEEGDKIDTETFWLRYFYRLDRLVRQK--RGVTLPSALAGEDDEEEDLSW 185 F EF + V K + ++++ +QA D+ D SS+++ +++ S + + LQ D T+ + ++ D E+W S FV L+ K+ E+ L++EN + +H K+V N +D ETFW RYFY++ +L + + R + A+A E EEEDLSW Sbjct: 103 FDEFGSSVLKGTAQIIAQGKNAIQAIDQESDSDSSTNQNLSNQRSSNSKPYSRFDAQVRSLQGDTATYCDEPEDLGDYEKWRSQFV----LNDKSEEIENLIEENGAIDNIHKKVVPN---------VVDNETFWFRYFYKVHKLKQAEDVRANLVKRAIARE--EEEDLSW 259 The following BLAST results are available for this feature:
BLAST of NO20G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01510 ID=NO20G01510|Name=NO20G01510|organism=Nannochloropsis oceanica|type=gene|length=1476bpback to top protein sequence of NO20G01510.1 >NO20G01510.1-protein ID=NO20G01510.1-protein|Name=NO20G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=407bpback to top Synonyms
Publications
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