NO20G01320, NO20G01320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01320 vs. NCBI_GenBank
Match: EWM22086.1 (hypothetical protein Naga_100039g34 [Nannochloropsis gaditana]) HSP 1 Score: 275.0 bits (702), Expect = 8.300e-70 Identity = 168/235 (71.49%), Postives = 177/235 (75.32%), Query Frame = 0 Query: 56 MSPGFPSPPFGHPAASLYGMNFPQGPPGSAPNMHAM----------FGSG-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRPTVGGPMVSSGPLVGGTEKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYPDGE 274 M+PGFPSPPF P ASLYGM P PP + N + G G XXXXXXXXXXXXXXXXXXXXXX RP+ GP+VSSGPLVGGTEKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKK+AW+K+EEDLLLKAH QFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYPDG+ Sbjct: 43 MAPGFPSPPFSLPGASLYGMXXP--PPAHSGNATHLPQNLFAPPPGVGGGVMDPFHPQGGPQQHLHNLHRPGGDMLAAXXXXXXXXXXXXXXXXXXXXXXXARPSEEGPVVSSGPLVGGTEKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKDAWTKDEEDLLLKAHAQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYPDGD 275
BLAST of NO20G01320 vs. NCBI_GenBank
Match: XP_009514218.1 (hypothetical protein PHYSODRAFT_343494 [Phytophthora sojae] >EGZ26943.1 hypothetical protein PHYSODRAFT_343494 [Phytophthora sojae]) HSP 1 Score: 161.4 bits (407), Expect = 1.300e-35 Identity = 73/112 (65.18%), Postives = 88/112 (78.57%), Query Frame = 0 Query: 159 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYP 271 ++R+ V KW +ED L+ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+KE WS EEE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R P Sbjct: 25 KERKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWSPEEERILRELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRGVTP 136
BLAST of NO20G01320 vs. NCBI_GenBank
Match: OWZ13371.1 (Myb-like DNA-binding protein [Phytophthora megakarya]) HSP 1 Score: 161.4 bits (407), Expect = 1.300e-35 Identity = 71/112 (63.39%), Postives = 89/112 (79.46%), Query Frame = 0 Query: 159 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYP 271 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+KE W+ +EE LL + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R + P Sbjct: 23 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTSDEEQLLKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRGNRP 134
BLAST of NO20G01320 vs. NCBI_GenBank
Match: XP_002909519.1 (myb-like DNA-binding protein, putative [Phytophthora infestans T30-4] >EEY58333.1 myb-like DNA-binding protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 160.2 bits (404), Expect = 3.000e-35 Identity = 72/112 (64.29%), Postives = 88/112 (78.57%), Query Frame = 0 Query: 159 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYP 271 ++R+ V KW +ED L+ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+KE W+ EEE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R P Sbjct: 27 KERKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPEEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRGFTP 138
BLAST of NO20G01320 vs. NCBI_GenBank
Match: CBN75476.1 (putative c-myb-like transcription factor [Ectocarpus siliculosus]) HSP 1 Score: 159.5 bits (402), Expect = 5.100e-35 Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 0 Query: 159 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKF----EGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQ 268 +++R VRKW QED + LV E G K WG+I ++ E RTGKQCRERWHNQLDP IKK+ W+K EED L++AH GN+WAEIAK+LPGRTDNAIKN WNSAKRRLSRQ Sbjct: 18 KRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGEDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQ 130
BLAST of NO20G01320 vs. NCBI_GenBank
Match: CCI44816.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 159.5 bits (402), Expect = 5.100e-35 Identity = 69/106 (65.09%), Postives = 84/106 (79.25%), Query Frame = 0 Query: 161 RRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 267 R+ V KW +ED ++ LV YGT+HW II TK GR GKQCRERWHNQLDP I+K+ W+ EEE +L +AH+++GN+WAEIAK LPGRTDNAIKN WNS+KRRL R Sbjct: 27 RKPVSKWTDEEDNMMIKLVERYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPSIRKDPWTDEEERILKEAHEKYGNKWAEIAKKLPGRTDNAIKNHWNSSKRRLKR 132
BLAST of NO20G01320 vs. NCBI_GenBank
Match: GAX94492.1 (myb-like DNA-binding protein, putative, partial [Pythium insidiosum]) HSP 1 Score: 159.5 bits (402), Expect = 5.100e-35 Identity = 68/106 (64.15%), Postives = 89/106 (83.96%), Query Frame = 0 Query: 159 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRL 265 +KR+ V KW +ED+++ LV++YGT+HW II TK GR GKQCRERWHN LDP I+K+ W++EEE +L ++H++FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL Sbjct: 10 KKRKPVCKWTEKEDQMMIKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNXLDPAIRKDPWTEEEERILRESHERFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRL 115
BLAST of NO20G01320 vs. NCBI_GenBank
Match: ETI50638.1 (hypothetical protein F443_05796 [Phytophthora parasitica P1569]) HSP 1 Score: 158.3 bits (399), Expect = 1.100e-34 Identity = 70/112 (62.50%), Postives = 88/112 (78.57%), Query Frame = 0 Query: 159 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYP 271 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+KE W+ +EE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R P Sbjct: 24 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRGFTP 135
BLAST of NO20G01320 vs. NCBI_GenBank
Match: ETM50316.1 (hypothetical protein L914_05605 [Phytophthora parasitica]) HSP 1 Score: 158.3 bits (399), Expect = 1.100e-34 Identity = 70/112 (62.50%), Postives = 88/112 (78.57%), Query Frame = 0 Query: 159 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSRQSYP 271 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+KE W+ +EE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R P Sbjct: 24 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRGFTP 135
BLAST of NO20G01320 vs. NCBI_GenBank
Match: ETK90599.1 (hypothetical protein L915_05663 [Phytophthora parasitica] >ETL44010.1 hypothetical protein L916_05601 [Phytophthora parasitica] >ETO79461.1 hypothetical protein F444_05844 [Phytophthora parasitica P1976] >ETP20412.1 hypothetical protein F441_05801 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 157.9 bits (398), Expect = 1.500e-34 Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = 0 Query: 159 EKRRAVRKWRPQEDELLTALVREYGTKHWGIICTKFEGRTGKQCRERWHNQLDPHIKKEAWSKEEEDLLLKAHQQFGNRWAEIAKVLPGRTDNAIKNRWNSAKRRLSR 267 ++R+ V KW +ED ++ LV++YGT+HW II TK GR GKQCRERWHNQLDP I+KE W+ +EE +L + H +FGN+WAEIAK+LPGRTDNAIKN WNS+KRRL R Sbjct: 24 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 131 The following BLAST results are available for this feature:
BLAST of NO20G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01320 ID=NO20G01320|Name=NO20G01320|organism=Nannochloropsis oceanica|type=gene|length=3252bpback to top protein sequence of NO20G01320.1 >NO20G01320.1-protein ID=NO20G01320.1-protein|Name=NO20G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=918bpback to top Synonyms
Publications
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