NO20G01140, NO20G01140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_012205300.1 (hypothetical protein SPRG_10676 [Saprolegnia parasitica CBS 223.65] >KDO23979.1 hypothetical protein SPRG_10676 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 83.6 bits (205), Expect = 2.300e-12 Identity = 84/382 (21.99%), Postives = 146/382 (38.22%), Query Frame = 0 Query: 79 VSELLSIMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCARVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNRDDGIGGWEEDRVTSNEGEAAAEAGSAGATLGATVALVHPSTMKVRWLDWDRLEAVSKFTWQVSEKAEEKGIRGGREEEEGAKSEVDEEYDRKENADYHCVSEEEIESFGRPRWSSGLLDVVIGSDCICDEPSAVGVARLLSLTLKPGTGVGYITAPAPQHRYGVHALPRELEA 461 ++ + I+ L+ D ++ V G+H + ++L ++ E++++ A + C+ + +++F LP+ P R + A P + +D +VLI + RM+ Q TGY LW AA IL R++ +N F + V+E+G+GLGL G+VA ++++ +TD+ + +Q +V LN D AT + V++ H LDWD L+ S+ +D+V+ SD IC+ +A G A ++ LKP GV Y+ R+GV L + L A Sbjct: 68 IARMHEILMLVADVIMDEDNCVHAAQLGMHFVLMKLLMHEH-----------ELIQDGASAVVVNCSSKKAN------TSGVNTSFPFKTLPLEPPT----RAWPLLQA---LPADARDEEDQVVLIRAVKTRMTGQPKTGYLLWGAAVILARWVHLNRELFHERSVLEVGSGLGLSGIVAAAYSQQMTMTDYQQDTLDALQYNVDLNFD--------------------------ATATSHVSMEH--------LDWDHLDL-----------------------------------------------------------SAPKVDIVMASDIICEPSTAEGFANVVRHRLKP-NGVAYLVNATSHSRFGVLHLQKLLLA 331
BLAST of NO20G01140 vs. NCBI_GenBank
Match: OQR93143.1 (hypothetical protein ACHHYP_02848 [Achlya hypogyna]) HSP 1 Score: 83.6 bits (205), Expect = 2.300e-12 Identity = 58/232 (25.00%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 55 FLEAGGVKALVELLKTHGFDRPIPVSELLSIMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCARVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLN 287 FLE +K L K+ + + ++ + ++ ++ +D ++ V G+H + +++ ++ E+++E A + C+ + +++F LP+ P T P + D +VLI + RM+ Q TGY LW AA IL R++ +N F G+ V+E+G+GLGL G+VA ++E LTD+ + +Q +V LN Sbjct: 45 FLEY-AMKELSAFAKSRAQNDEVTIALIHRLLLVVATVIEDEDNCVHAAQLGMHFVLMKLMMHEH-----------ELIQEGAAAVVVNCSSKKAN------TTGINTSFPFKTLPLEPP-------TRAWPLLQVLPVDNRDKDDQVVLIRAVKTRMTGQPKTGYLLWGAAVILARWVHLNRQLFEGRSVLEVGSGLGLSGIVAAAYSQETRLTDYQQDTLDALQYNVDLN 251
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_009515609.1 (hypothetical protein PHYSODRAFT_537041 [Phytophthora sojae] >EGZ28334.1 hypothetical protein PHYSODRAFT_537041 [Phytophthora sojae]) HSP 1 Score: 82.4 bits (202), Expect = 5.200e-12 Identity = 63/222 (28.38%), Postives = 102/222 (45.95%), Query Frame = 0 Query: 80 SELLSIMRLLILCCQDT----ESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCA----------RVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNR 288 SE L+I ++L +T ++A + G HP + R++ ++NE+ ++E A E+ + C RVR ++RL P VP+ N ++ L VLI + RM+ Q TGY LW AA +L R+I + F K V+E+G+GLGL G+VA R A++ LTD+ ++ +V+LN+ Sbjct: 75 SEDLAITHEMLLLLAETVVDEDNATFIARIGAHPLLMRLMENENED-----------IQEAAAEVVTSCTSSPSAITFPHRVRQVGEVERL------------WPRAVPL-------PFDPRDNAPKNEDGSQGTLEVLIRQVPTRMTGQRKTGYLLWGAAFVLARWIHKHRELFEDKSVIEVGSGLGLGGIVAARYARQTTLTDYQSDTCTALEYNVQLNK 266
BLAST of NO20G01140 vs. NCBI_GenBank
Match: POM65787.1 (Hypothetical protein PHPALM_18446 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 82.4 bits (202), Expect = 5.200e-12 Identity = 62/213 (29.11%), Postives = 96/213 (45.07%), Query Frame = 0 Query: 85 IMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCA----------RVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNR 288 I+ LL D ++A V G H + R++ DNE+ ++E A E+ + C RVR ++R+ P VP+ R + +A Q L VLI + RM+ Q TGY LW AA +L R+I + F G+ V+E+G+GLGL G+ A R A+ LTD+ ++ +V+LN+ Sbjct: 84 ILLLLAETVVDEDNATFVARIGAHSLLLRLMEHDNED-----------IQEAAAEVVAACTSSPSAITFPHRVRQVGEVERM------------WPREVPLPFDPRDNALKNADGSQ-------STLSVLIRQVPTRMTGQRKTGYLLWGAAFVLARWIHKHRDLFVGRSVLEVGSGLGLGGVTAARYARHTTLTDYQADTCTALEYNVQLNK 266
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_024572818.1 (Predicted methyltransferase [Plasmopara halstedii] >CEG36449.1 Predicted methyltransferase [Plasmopara halstedii]) HSP 1 Score: 76.6 bits (187), Expect = 2.900e-10 Identity = 60/204 (29.41%), Postives = 88/204 (43.14%), Query Frame = 0 Query: 85 IMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCARVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENES-KDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNR 288 I+ LL L D + A + G HP + R++ E G ED + E A ++ + C + L +P+ ++ P +ES L VLI + RM+ Q TGY LW AA IL R+I + F K V+E+G+GLGL G+ A R A LTD+ + +VRLN+ Sbjct: 83 ILLLLALTVVDEDHATYIARIGAHPLLMRLM-----EHGNED------IEEAAAKVVTACTSSPSAVTFPHRVREIEEVELLWPLAALLPL----------DPRDDVPKSADESTSTLQVLIRQVPTRMTGQNKTGYRLWGAAFILARWIHKHRDMFVNKSVLEVGSGLGLGGITAARYANHTTLTDYQSDTCSALSYNVRLNK 265
BLAST of NO20G01140 vs. NCBI_GenBank
Match: GAX20907.1 (hypothetical protein FisN_1Lh439 [Fistulifera solaris]) HSP 1 Score: 75.5 bits (184), Expect = 6.400e-10 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 0 Query: 198 SKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKE-------VLLTDHNLACVRQMQEHVRLN 287 S+ + VLI + R S+Q D G+ LWP+A IL+R+++ S GKRV+EIGAG GL GLVA + + V+LTD N + +Q ++ LN Sbjct: 41 SQSVQVLIHQVTDRQSAQEDVGFVLWPSALILSRWLVTEPSVLEGKRVLEIGAGCGLTGLVAALLQQRCSNKNSCVVLTDFNATVLNNLQRNINLN 136
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_002286806.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96447.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 75.1 bits (183), Expect = 8.300e-10 Identity = 63/226 (27.88%), Postives = 103/226 (45.58%), Query Frame = 0 Query: 81 ELLSIMRLLILCCQ----DTESAVGVGLFGLHPWIKRVL--------ASDNEEEGQEDDEATEVLREYAEEIASRCARVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKD--LIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKE------VLLTDHNLACVRQMQEHVRLN 287 E+ ++ RLL L + D+ +G G I R+ S+++ +ED +A L++ EI S C R AF+ L R+P+ + +I +NE D VLI+ + R S+Q D G+ +WP+A +L+R++L N K V+EIGAG L G+VA + KE +L+TD N + + +++ LN Sbjct: 122 EIKALQRLLDLLVRVSLLDSTLGEEIGRSGSQSIISRIFEQLKQCISISESDGSCEEDLDALMDLQDAVCEIYSPCIR--------------GMAFTDDELRRRLPLIYNLTPVSI----------DNEEPDEYTTVLINQVTKRQSAQIDVGFVMWPSAIVLSRWLLSNRHVLKDKNVLEIGAGCALTGIVAASLMKEDNTTQQILITDFNDTVLENISQNIHLN 323
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_004353780.1 (hypothetical protein DFA_12143 [Cavenderia fasciculata] >EGG14371.1 hypothetical protein DFA_12143 [Cavenderia fasciculata]) HSP 1 Score: 73.6 bits (179), Expect = 2.400e-9 Identity = 32/75 (42.67%), Postives = 53/75 (70.67%), Query Frame = 0 Query: 212 MSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLN 287 +++Q TG WPAA+IL FI IN++ F K+V+E+G G+G+CGLVA + +L+TD +L+ + Q+ +++ LN Sbjct: 73 INTQPSTGLLPWPAASILFNFIAINNNLFNNKKVLELGTGVGVCGLVASKFCASILMTDGDLSTLGQLSDNLDLN 147
BLAST of NO20G01140 vs. NCBI_GenBank
Match: CBJ33500.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.0 bits (175), Expect = 7.000e-9 Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 197 ESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRV 263 + + + VL+ P+ R SQ D G+ +WPAA IL+R + N S G+RV+EIGAGLGL GLVA R+ Sbjct: 143 DGERISVLVRPVKQRQHSQCDVGFVMWPAAIILSRLLCRNPSLVRGRRVLEIGAGLGLAGLVAARI 208
BLAST of NO20G01140 vs. NCBI_GenBank
Match: GAX14245.1 (hypothetical protein FisN_1Hh439 [Fistulifera solaris]) HSP 1 Score: 71.2 bits (173), Expect = 1.200e-8 Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0 Query: 203 VLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAK-------EVLLTDHNLACVRQMQEHVRLN 287 VLI + R S+Q D G+ LWP+A IL+R+++ GKRV+EIGAG GL GLVA + + V+LTD N + +Q ++ LN Sbjct: 193 VLIHQVTDRQSAQEDVGFVLWPSALILSRWLVTEPFVLEGKRVLEIGAGCGLTGLVAALLQQRYSNKNGSVVLTDFNATVLNNLQRNIDLN 283 The following BLAST results are available for this feature:
BLAST of NO20G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01140 ID=NO20G01140|Name=NO20G01140|organism=Nannochloropsis oceanica|type=gene|length=2120bpback to top protein sequence of NO20G01140.1 >NO20G01140.1-protein ID=NO20G01140.1-protein|Name=NO20G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=602bpback to top Synonyms
Publications
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