NO20G01140, NO20G01140 (gene) Nannochloropsis oceanica

Overview
NameNO20G01140
Unique NameNO20G01140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2120
Alignment locationchr20:355403..357522 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:355403..357522 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR019410Nicotinamide_N-MeTfrase-like
Homology
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: CBN75587.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 110.9 bits (276), Expect = 1.400e-20
Identity = 115/374 (30.75%), Postives = 155/374 (41.44%), Query Frame = 0 
Query:  197 ESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRV--------------------------------AKEVLLTDHNLACVRQMQEHVRLNRDD---GIGGWEEDRVTSNEGEAAAEAGSAGATLG----ATVALVHPSTMKVRWLDWDRLEAVSKFTWQVSEKAEEKGIRGGREE--EEGAKSEVDE-EYDRKENADYHCVS----EEEIESFGRPRWSSGL--------LDVVIGSDCICDEPSAVGVARLLSLTL--KPG------------------TGVGYITAPAPQHRYGVHAL-PRELEACGLSFEQEEVTDEELLEDLQEAAYMRF---HLFTV 493
            + + + VL+ P+  R  SQ D G+ +WPAA IL+R +  N S   G+RV+EIGAGLGL GLVA R+                                A  V L+D N   +R ++ +V LN  D      G     V  +      E GS  A       A  A V   T+ VR LDWD+LE V               + GGR +  E   + + D   +D  E + Y   S    +  +    R    SG+         DV+I SD IC    A G  R+L   L   PG                   G  +     P+ R+GV AL P   EA GL F  EEVTD +L+  L EAAY+ +   H++TV
Sbjct:  239 DGERISVLVRPVKRRQHSQFDVGFVMWPAAIILSRLLCRNPSLVRGRRVLEIGAGLGLAGLVAARIQQAPSSASNTSLAGLPCSSRGTVVGSRSDVAAAASVTLSDFNPLVLRALEANVALNSPDCGMAADGGVSCGVRRDASNCDEENGSVRAKHDRRGEAKEATVEHGTVHVRHLDWDKLEGVPGVGADSCRSCTVVELGGGRTQAAESQPRDDADSGSFDDSEPSSYAAESCFPRDGCVNGVSRGGEDSGVKGIEHGERFDVIIASDHICQASDAEGTIRVLRAMLAEAPGPTATXXXXXXXXXXXXXTRGQAHFVVAHPRTRWGVDALVPLLREAPGLDFTCEEVTDPDLVGGLDEAAYLAWLHVHVWTV 612
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: GAX95550.1 (Hypothetical protein PINS_003442, partial [Pythium insidiosum])

HSP 1 Score: 95.5 bits (236), Expect = 5.900e-16
Identity = 81/304 (26.64%), Postives = 125/304 (41.12%), Query Frame = 0 
Query:  194 KENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNRDDGIGGWEEDRVTSNEGEAAAEAGSAGATLGATVALVHPSTMKVRWLDWDRLEAVSKFTWQVSEKAEEKGIRGGREEEEGAKSEVDEEYDRKENADYHCVSEEEIESFGRPRWSSGLLDVVIGSDCICDEPSAVGVARLLSLTLKPGTGVGYITAPAPQHRYGVHALPRELEACGLSFEQEEVTD----EELLEDLQEAAYMRFHLFTVR 494
            ++ + +   VL+  +  RM+ Q  TGY LW AA +L R+I ++   F GK V+E+G+GLGL G+VA R A    LTD+     R ++ ++ LNR+            ++E +AA                     + V  LDWD LE++   T                                                 G PR    LLDV+IG D IC+  +A G  R+L   L+P  GV Y+       R+GV  L   L A    +   +V        LL+ +Q++  +R+  + +R
Sbjct:  143 RDRDGESRAVLVRQVPTRMTGQPKTGYLLWGAARVLARWIHLHRELFDGKSVLEVGSGLGLGGIVAARYAARTTLTDYQSDTCRALEYNIALNRE-----------FTHELDAA------------------KPDVDVEMLDWDDLESICGPT------------------------------------------------DGEPR---PLLDVIIGCDIICEPSTADGFLRVLRHRLQP-HGVAYLMNADAHSRFGVAYLHETLAASDFVYSITKVDQLPDGHALLDTVQDSKELRYEFYEIR 365
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: OQR88826.1 (hypothetical protein THRCLA_10075, partial [Thraustotheca clavata])

HSP 1 Score: 91.3 bits (225), Expect = 1.100e-14
Identity = 61/212 (28.77%), Postives = 106/212 (50.00%), Query Frame = 0 
Query:   79 VSELLSIMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEI----ASRCARVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLN 287
            ++ +  I+ ++    +D ++ V     G+H  + R+L  +N           E+++E A  I    +S+ A   G           +++F    LP+  P     R   +  A  H   +++E+ + +VLI  +  RM+ Q  TGY LW AA IL R+I +N   F G+ V+E+G+GLGLCG+VA   + ++ LTD+    +  +Q +V LN
Sbjct:   25 INNVYKILLMVAAVIEDEDNCVHAAQLGMHLVVMRLLMHEN-----------ELIQEGASAIVVNSSSKNANTSG----------INTSFPYKTLPLEPPT----REWPLLQALPHDV-RDDENDEQVVLIRAVKTRMTGQPKTGYLLWGAAVILARWIHLNRQLFHGQTVLEVGSGLGLCGIVAAAYSDQITLTDYQQDTLDALQYNVNLN 210
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_008874452.1 (hypothetical protein H310_09994 [Aphanomyces invadans] >ETV97206.1 hypothetical protein H310_09994 [Aphanomyces invadans])

HSP 1 Score: 88.6 bits (218), Expect = 7.300e-14
Identity = 82/306 (26.80%), Postives = 120/306 (39.22%), Query Frame = 0 
Query:  192 PGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNRDDGIGGWEEDRVTSNEGEAAAEAGSAGATLGATVALVHPSTMKVRWLDWDRLEAVSKFTWQVSEKAEEKGIRGGREEEEGAKSEVDEEYDRKENADYHCVSEEEIESFGRPRWSSGLLDVVIGSDCICDEPSAVGVARLLSLTLKPGTGVGYITAPAPQHRYGVHALPRELEACGLS---FEQEEVTD-EELLEDLQEAAYMRFHLFTVR 494
            P    +  D +VLI  +  RM+ Q  TGY LW AA IL+R+I ++   F GKRV+E+G+GLGL G+VAG  +   +LTD+    +  +  +V LN+                                      P+T+ V  LDWD L+                                                    E  G P+     +D+VI SD ICD  +A G A ++   L  GTGV Y+       R+GV  L   L A          E + D   LL+ + +A  +R+  +T+R
Sbjct:  157 PRDSRDDNDRVVLIRAVTRRMTGQPKTGYLLWGAAVILSRWIHLHRELFHGKRVLEVGSGLGLSGIVAGFHSDLTILTDYQQDTINALAYNVALNQT-------------------------------------PNTI-VTHLDWDHLD----------------------------------------------------EGRGDPK-----VDLVIASDIICDPTTAEGFANVIRSRLS-GTGVAYLVNATSHSRFGVVRLQEILLAPPFDTTIVPVEALPDGARLLDTVWDANELRYEHYTIR 366
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_009832746.1 (hypothetical protein H257_08537 [Aphanomyces astaci] >ETV77636.1 hypothetical protein H257_08537 [Aphanomyces astaci])

HSP 1 Score: 85.5 bits (210), Expect = 6.100e-13
Identity = 97/415 (23.37%), Postives = 158/415 (38.07%), Query Frame = 0 
Query:   85 IMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCARVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNRDDGIGGWEEDRVTSNEGEAAAEAGSAGATLGATVALVHPSTMKVRWLDWDRLEAVSKFTWQVSEKAEEKGIRGGREEEEGAKSEVDEEYDRKENADYHCVSEEEIESFGRPRWSSGLLDVVIGSDCICDEPSAVGVARLLSLTLKPGTGVGYITAPAPQHRYGVHALPRELEACGLSFEQEEVTDE------ELLEDLQEAAYMRFHLFTVR 494
            ++ ++    +D ++AV     G H  + ++L  DN           E++ + A E+   CA             C+ +  +       +P+    R      A    P    ++   +VLI  +  RM+ Q  TGY LW AA IL R+I ++   F GK V+E+G+GLGL G+VAG  +   +LTD+    ++ +  +V LN+                            T+G T          V  LDWD L+       + +E+A+                                                  +D+VI SD ICD  +A G A ++   L   +GV Y+       R+GV  L REL      F+   V  E       LL+ + +A  +R+  +T+R
Sbjct:   74 VLSIVAKVMKDEDNAVHAAQLGWHTLLLKLLLHDN-----------ELISDAASEVVVTCATHN----------CNTTGINISFPYTTLPLEPPTRPWPQLQA---LPRDARDADVPVVLIRAVKRRMTGQPKTGYLLWGAAVILARWIHLHRELFDGKSVLEVGSGLGLSGIVAGAYSLRTILTDYQQDTLKALAYNVMLNQ----------------------------TMGTT----------VEHLDWDHLD-------KTNEQAK--------------------------------------------------VDLVIASDIICDPTTAEGFANVIRTRLST-SGVAYLVNATGHSRFGVGRL-REL-LLAPPFDTTIVPVETLPDGLRLLDTVWDAKELRYEHYTIR 366
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_002906564.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY65965.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 85.5 bits (210), Expect = 6.100e-13
Identity = 63/227 (27.75%), Postives = 100/227 (44.05%), Query Frame = 0 
Query:   74 DRPIPVSELLSIMRLLILCCQ---DTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCA----------RVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNR 288
            +R +   +L  +  +L+L  +   D ++A  +   G HP + R++  DNEE           ++E A E+ + C           RVR    ++R+             P  VP+             N     +     L VLI  +  RM+ Q  TGY LW AA +L R+I  +   F GK V+E+G+GLGL G+ A R A    LTD+       ++ +V+LN+
Sbjct:   70 NRDVSEDDLKVVREILLLVAETVVDEDNATFIARIGAHPLLMRLMEHDNEE-----------IQEAAAEVVTACTSSPLAITFPHRVRQIGEVERV------------WPRAVPL-------PFDPRDNAPKSADGSQSTLNVLIRQVPTRMTGQRKTGYLLWGAAFVLARWIHKHRDLFVGKSVLEVGSGLGLGGITASRYATNTTLTDYQSDTCTALEYNVQLNK 266
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_008613139.1 (hypothetical protein SDRG_09008 [Saprolegnia diclina VS20] >EQC33499.1 hypothetical protein SDRG_09008 [Saprolegnia diclina VS20])

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-12
Identity = 91/425 (21.41%), Postives = 158/425 (37.18%), Query Frame = 0 
Query:   74 DRPIPVSELLSIMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCARVRGGFPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNRDDGIGGWEEDRVTSNEGEAAAEAGSAGATLGATVALVHPSTMKVRWLDWDRLEAVSKFTWQVSEKAEEKGIRGGREEEEGAKSEVDEEYDRKENADYHCVSEEEIESFGRPRWSSGLLDVVIGSDCICDEPSAVGVARLLSLTLKPGTGVGYITAPAPQHRYGVHALPRELEA-----CGLSFEQEEVTDEELLEDLQEAAYMRFHLFTVR 494
            D  + ++    I+ L+     D ++ V     GLH  + ++L  ++           E++++ A  +   C+  +            +++F    LP+  P     RT  +  A    P    + ++ +VLI  +  RM+ Q  TGY LW AA IL R++ +N   F  + V+E+G+GLGL G+VA   ++ + LTD+    +  +Q +V LN D                                      S + +  LDWD L+                                                            S+  +D+V+ SD IC+  +A G A ++   LKP  GV Y+       R+GV  L + L A       +  E        LLE + +A  +++  +T+R
Sbjct:   63 DDEVTIARTHKILLLVAAVITDEDNCVHAAQLGLHFVLMKLLMHEH-----------ELIQDGASAVVVNCSSKKAN------TSGVNTSFPFTTLPLEPPT----RTWPLLQA---LPTDARDDENRVVLIRAVKMRMTGQPKTGYLLWGAAVILARWVHLNRERFRERSVLEVGSGLGLSGIVAAAYSQTMTLTDYQQDTLDALQYNVDLNLD-----------------------------------ASTSHVTIEHLDWDHLDL-----------------------------------------------------------SAPKVDIVMASDIICEPSTAEGFANVVRHRLKP-NGVAYLVNATSHSRFGVLHLQKLLLAPPFVTTIVPVESLPEGPSALLETVWDANELKYEHYTIR 368
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: ETI40645.1 (hypothetical protein F443_14011 [Phytophthora parasitica P1569])

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-12
Identity = 64/205 (31.22%), Postives = 95/205 (46.34%), Query Frame = 0 
Query:   85 IMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCARVRGG--FPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNR 288
            I+ LL     D ++A  +   G HP + R++  DNEE           ++E A E+ + C        FP  R+    +     L  P  VP+    R     +A   Q         L VLI  +  RM+ Q  TGY LW AA +L R+I  +   F GK V+E+G+GLGL G+ A R A+   LTD+       ++ +V+LN+
Sbjct:   84 ILLLLAETVVDEDNATFIARIGAHPLLMRLMEHDNEE-----------IQEAAAEVVTACTSSPSAITFP-HRVRQVGE---VQLLWPRAVPLPFDPRDNVPKNADGTQ-------GTLNVLIRQVPTRMTGQRKTGYLLWGAAFVLARWIHKHRDLFVGKSVLEVGSGLGLGGITAARYAQNTTLTDYQADTCTALEYNVQLNK 266
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: XP_008909463.1 (hypothetical protein PPTG_14715 [Phytophthora parasitica INRA-310] >ETK80744.1 hypothetical protein L915_13655 [Phytophthora parasitica] >ETL34159.1 hypothetical protein L916_13554 [Phytophthora parasitica] >ETL87445.1 hypothetical protein L917_13361 [Phytophthora parasitica] >ETM40675.1 hypothetical protein L914_13449 [Phytophthora parasitica] >ETN04993.1 hypothetical protein PPTG_14715 [Phytophthora parasitica INRA-310] >ETO69332.1 hypothetical protein F444_14043 [Phytophthora parasitica P1976] >ETP10402.1 hypothetical protein F441_13939 [Phytophthora parasitica CJ01A1] >ETP38577.1 hypothetical protein F442_13853 [Phytophthora parasitica P10297])

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-12
Identity = 64/205 (31.22%), Postives = 95/205 (46.34%), Query Frame = 0 
Query:   85 IMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCARVRGG--FPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNR 288
            I+ LL     D ++A  +   G HP + R++  DNEE           ++E A E+ + C        FP  R+    +     L  P  VP+    R     +A   Q         L VLI  +  RM+ Q  TGY LW AA +L R+I  +   F GK V+E+G+GLGL G+ A R A+   LTD+       ++ +V+LN+
Sbjct:   84 ILLLLAETVVDEDNATFIARIGAHPLLMRLMEHDNEE-----------IQEAAAEVVTACTSSPSAITFP-HRVRQVGE---VQLLWPRAVPLPFDPRDNVPKNADGTQ-------GTLNVLIRQVPTRMTGQRKTGYLLWGAAFVLARWIHKHRDLFVGKSVLEVGSGLGLGGITAARYAQNTTLTDYQADTCTALEYNVQLNK 266
[Close]
BLAST of NO20G01140 vs. NCBI_GenBank
Match: KUF86393.1 (Separin [Phytophthora nicotianae] >KUF90366.1 Separin [Phytophthora nicotianae])

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-12
Identity = 64/205 (31.22%), Postives = 95/205 (46.34%), Query Frame = 0 
Query:   85 IMRLLILCCQDTESAVGVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCARVRGG--FPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKDLIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGAGLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNR 288
            I+ LL     D ++A  +   G HP + R++  DNEE           ++E A E+ + C        FP  R+    +     L  P  VP+    R     +A   Q         L VLI  +  RM+ Q  TGY LW AA +L R+I  +   F GK V+E+G+GLGL G+ A R A+   LTD+       ++ +V+LN+
Sbjct: 1555 ILLLLAETVVDEDNATFIARIGAHPLLMRLMEHDNEE-----------IQEAAAEVVTACTSSPSAITFP-HRVRQVGE---VQLLWPRAVPLPFDPRDNVPKNADGTQ-------GTLNVLIRQVPTRMTGQRKTGYLLWGAAFVLARWIHKHRDLFVGKSVLEVGSGLGLGGITAARYAQNTTLTDYQADTCTALEYNVQLNK 1737
The following BLAST results are available for this feature:
BLAST of NO20G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN75587.11.400e-2030.75conserved unknown protein [Ectocarpus siliculosus][more]
GAX95550.15.900e-1626.64Hypothetical protein PINS_003442, partial [Pythium... [more]
OQR88826.11.100e-1428.77hypothetical protein THRCLA_10075, partial [Thraus... [more]
XP_008874452.17.300e-1426.80hypothetical protein H310_09994 [Aphanomyces invad... [more]
XP_009832746.16.100e-1323.37hypothetical protein H257_08537 [Aphanomyces astac... [more]
XP_002906564.16.100e-1327.75conserved hypothetical protein [Phytophthora infes... [more]
XP_008613139.11.000e-1221.41hypothetical protein SDRG_09008 [Saprolegnia dicli... [more]
ETI40645.11.000e-1231.22hypothetical protein F443_14011 [Phytophthora para... [more]
XP_008909463.11.000e-1231.22hypothetical protein PPTG_14715 [Phytophthora para... [more]
KUF86393.11.000e-1231.22Separin [Phytophthora nicotianae] >KUF90366.1 Sepa... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002643NSK002643Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01140.1NO20G01140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|90113gene_6327Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01140.1NO20G01140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01140 ID=NO20G01140|Name=NO20G01140|organism=Nannochloropsis oceanica|type=gene|length=2120bp
GCACAGGGCTAGCCAGCGGAAATGGGACAAGGCATCTAAATTGCGCTCCA
AAACCTCCCCACCCCACGATGCTCCGCACGACCTTGGCCCGGGAAGAAGT
GGCAGTCCGCAACGCCGTGGATAAGCTCTTGAGTCGGCAGCTGCAACAAC
AGGAGGATGGTCAATTCATGAGCTACGACAAAGAACAGACGCTCCAAGCT
CTATTGCGAACGCCGCGCCGTCGCTTTCTCTTCTTGGAAGCCGGTGGCGT
GAAAGCATTGGTCGAGCTACTGAAAACACACGGTTTCGACCGTCCTATAC
CTGTATCTGAGCTCCTGAGCATTATGCGTTTACTTATCCTATGCTGTCAG
GACACGGAGAGTGCCGTGGGAGTAGGGCTGTTCGGCCTACATCCGTGGAT
AAAACGGGTGCTGGCCTCGGACAATGAAGAGGAAGGCCAGGAGGATGACG
AGGCAACGGAGGTCCTGCGAGAATATGCTGAGGAGATCGCCAGCCGCTGC
GCTCGCGTTCGTGGGGGTTTCCCCCTTCAAAGATTGGCATTATGCTCAGA
TTCGGCATTCTCGTCGTTACATTTGCCCGTACGTGTGCCTATTTATTCTC
ACTTTCGCACCACCACCATCACCCACGCTCAAAACCATCAGCCAGGGAAA
GAAAATGAAAGCAAGGATCTCATCGTTCTGATTTCACCCATCGCCTATCG
TATGAGCAGTCAAGCGGATACTGGTTATTTTCTATGGCCGGCTGCTACTA
TTCTCACTCGATTCATTTTGATAAATTCTTCTTTTTTTGCTGGGAAGAGG
GTGATGGAGATCGGAGCAGGGTTGGGGTTGTGTGGTTTAGTTGCAGGGAG
GGTTGCCAAAGAGGTGTTGCTGACTGATCATAATTTAGCATGTGTGCGGC
AAATGCAGGAGCATGTGAGATTGAATCGTGATGATGGGATAGGGGGATGG
GAGGAAGATCGAGTGACATCGAATGAAGGAGAGGCAGCGGCAGAGGCAGG
ATCAGCGGGAGCAACTTTAGGAGCAACAGTAGCGCTTGTGCATCCAAGCA
CAATGAAAGTGCGGTGGTTAGATTGGGATCGGCTGGAGGCCGTGTCGAAA
TTCACGTGGCAAGTGTCGGAGAAGGCAGAAGAGAAGGGGATACGAGGGGG
GCGGGAAGAGGAGGAAGGAGCAAAGAGCGAGGTGGACGAAGAGTATGATA
GAAAGGAGAATGCTGATTATCACTGTGTTTCAGAGGAGGAGATCGAAAGC
TTTGGCCGGCCGCGATGGAGCAGTGGCTTGCTCGATGTGGTGATAGGGAG
TGACTGTATTTGCGACGAGCCTAGCGCGGTGGGAGTGGCCCGCCTCCTTA
GCTTGACCTTGAAGCCGGGCACTGGAGTGGGGTATATCACTGCTCCTGCC
CCCCAGCATAGgtaagatatatgatttgttcttagaaatgggatagaaaa
gattaattaatttcttaattaaatgaatcaataaataagataaaataaaa
ggatgatgaatgaaagagaggaagacagggatgaattaatgaattagaat
agatgaataggtcaatgaatgaatgcatgagtaatgaaagcaaaacttac
aaatgcacgcaccgaattaaaaacagGTATGGCGTCCACGCTCTTCCGCG
AGAGCTGGAGGCATGCGGGCTGAGCTTTGAACAGGAGGAGGTTACTGACG
AGGAGCTGTTGGAAGACCTTCAGGAGGCGGCATACATGCGCTTTCACCTC
TTCACGGTGCGGAGGATGAAGGAGGAGGGGCAGCAAGGAAGAGAGGCAGC
AGTAGCAGTAGTAGTAGCAGCTGCAGCTACAGCAACAGCAGCAGTAGCGG
CAACAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAACAGCAACA
GCAGCAACAGCAGCAGGAGTAGTAGCAGCAGCAGCAGCACTAGCAGCAGC
CACAACAGCAGCAACAGCAACAGCAGTAGCAGTAGCAGGAGGAGTTATGG
GAGCAGCACCAACAGCAGTAACAGGAGGAGCTGTCGATGCATGCGCACTG
CCCAGCATAGGTTCAATAGACGTGACAGAGGAAATGTAAATGTACGAAAG
CCAGGTACACATACCCACAC
back to top

protein sequence of NO20G01140.1

>NO20G01140.1-protein ID=NO20G01140.1-protein|Name=NO20G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=602bp
MLRTTLAREEVAVRNAVDKLLSRQLQQQEDGQFMSYDKEQTLQALLRTPR
RRFLFLEAGGVKALVELLKTHGFDRPIPVSELLSIMRLLILCCQDTESAV
GVGLFGLHPWIKRVLASDNEEEGQEDDEATEVLREYAEEIASRCARVRGG
FPLQRLALCSDSAFSSLHLPVRVPIYSHFRTTTITHAQNHQPGKENESKD
LIVLISPIAYRMSSQADTGYFLWPAATILTRFILINSSFFAGKRVMEIGA
GLGLCGLVAGRVAKEVLLTDHNLACVRQMQEHVRLNRDDGIGGWEEDRVT
SNEGEAAAEAGSAGATLGATVALVHPSTMKVRWLDWDRLEAVSKFTWQVS
EKAEEKGIRGGREEEEGAKSEVDEEYDRKENADYHCVSEEEIESFGRPRW
SSGLLDVVIGSDCICDEPSAVGVARLLSLTLKPGTGVGYITAPAPQHRYG
VHALPRELEACGLSFEQEEVTDEELLEDLQEAAYMRFHLFTVRRMKEEGQ
QGREAAVAVVVAAAATATAAVAATAAAAAATTTTAATATAATAAGVVAAA
AALAAATTAATATAVAVAGGVMGAAPTAVTGGAVDACALPSIGSIDVTEE
M*
back to top
Synonyms
Publications