NO20G01050, NO20G01050 (gene) Nannochloropsis oceanica

Overview
NameNO20G01050
Unique NameNO20G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2077
Alignment locationchr20:331663..333739 +

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Properties
Property NameValue
DescriptionUbiquitin fusion degradaton
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:331663..333739 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR001012UBX_dom
IPR004854UFD1
Homology
BLAST of NO20G01050 vs. NCBI_GenBank
Match: EWM22112.1 (ubiquitin fusion degradaton [Nannochloropsis gaditana])

HSP 1 Score: 257.3 bits (656), Expect = 9.700e-65
Identity = 171/364 (46.98%), Postives = 200/364 (54.95%), Query Frame = 0
Query:  142 LPPGARKTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGE-------GLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGLSQVPELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGTELGRTSRGGGHSVGEAMGNEVSPLRMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAITRHMKMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDE-----KSYRLVTRFPRRVFCAVETVGQSVEEVLGPGTGKKEMLMYEAC 494
            LP GAR THAGVLEFSAE+G +GLPLKVRKSL      +      G E K+ +G GGE         W   G  VRVKY+RLEKG YAK QP+TG L  VPELKGMLEMNL  H+TL++GD+LQVWYRG+CFDL+V  LEP +     AVTVIDTDLTVD             R     R S   G   G+ +G      R+                                       ++   G  E E  +S I    ++  L  EP E     I+LVVRKPDGS+ SR F + QPFQDVFRFV+A SVS +      +YRLVTRFPRRVF   ET  QSV EVLG   GK+E LMYEAC
Sbjct:   18 LPAGARVTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGME-KRMEGPGGEEGDSRESSAWG-SGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQ-----AVTVIDTDLTVD----VEVPEEQTERERVEKRLSTDAGGVKGQVVGXXXXXXRV------------------------SQSCESRGQEAGMEESSVNSGAKEEERRKSMIA--AQLSKLAPEPDEGNGDWIALVVRKPDGSMISRRFLRSQPFQDVFRFVEATSVSSDHDRLHMTYRLVTRFPRRVFTVGETAAQSVGEVLGSEAGKRETLMYEAC 344          
BLAST of NO20G01050 vs. NCBI_GenBank
Match: CBJ31340.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 150.6 bits (379), Expect = 1.300e-32
Identity = 147/429 (34.27%), Postives = 188/429 (43.82%), Query Frame = 0
Query:   79 ALLPFEVEGEGDKITLPPSALESLSKQDALAHGPMLFQLFLVSPTSXXXXXXXXXXXXXXXAGLPPGARKTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELK--------KGQGGGGEGLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGLSQVPELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLK--------VTELEP------IEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGT-ELGRTSRG--GGHSV---GEAMGNEVSPL-----RMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAITRH--MKMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSV---------SDEKSYRLVTRFPRRV 464
            +LL    +GEGDKI LPPSALE LS+QDA+  GPMLF+L   +  +                G     R THAGVLEF A+EGT+GLP KV  SLLG          + E +         K +    EGL N+V     V+Y+RL K  +A+  P+T GLSQV EL+ MLE N+  H+TLT GD L VW RGK F LK          E EP      +E      VTVIDTD+ ++             +G  +  +T R   G  ++   G +    +SP        +G                         XXXXXXXXX    ++  G   P+     + +H   K   L  EP   EEGV +  +R  +G    R           FRF DA  V              YRLV  FPRRV
Sbjct:   83 SLLAVTADGEGDKILLPPSALECLSRQDAVGLGPMLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANDDPENAKAERPAVEGLENVV-----VRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSLKSEDSHSPLTPEREPPLTMQVVELRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAATISSRGSSPTQSLSPPPSGRGYAVGGKGSSVAAGGRDTSTTGLSPMDDSEXXXXXXXXXXXERSTPGG---PKKGAFDLEKHRLAKFQQLPEEPPRDEEGVFTCQLRTTEGKFTRR-----------FRFADALGVLLDFCEAQGGVPGQYRLVMPFPRRV 492          
BLAST of NO20G01050 vs. NCBI_GenBank
Match: POM68778.1 (Hypothetical protein PHPALM_15016 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 129.0 bits (323), Expect = 4.000e-26
Identity = 114/414 (27.54%), Postives = 175/414 (42.27%), Query Frame = 0
Query:   80 LLPFEVEGEGDKITLPPSALESLSKQDALAHGPMLFQLFLVSPTSXXXXXXXXXXXXXXXAGLPPGARKTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGEGLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGLSQVP-ELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGTELGRTSRGGGHSVGEAMGNEVSPLRMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAIT-RHMKMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDEKSYRLVTRFPRRVFCAVETVGQSVEEVLGPGTGKKEMLMYE 492
            L P    G+GDKITLP SALE L+ Q+AL  G   F+L     ++                      + THAGVLEF AEEGTVGLP KV  SL               + K+            +   ++V+++RLEKG++A  QP+  G  +   + K M E +L  H+TLT+GD+L V +  + F++ V EL+P       A+ +++TDL VD                           +V EA   +                                                EE V     A+     +  KM +L  EP   E   + +V+R P+G V  R F    P +DVF F++A +  + + ++L   +PRR+F +V+  G+S++++     G++E L  E
Sbjct:   82 LRPVPTTGDGDKITLPVSALEELNPQNALELGVFTFELSFQEQSAMKDGEMVAI------------KKLTHAGVLEFIAEEGTVGLPPKVAASLF-------------SQTKQ------------LPSSIQVRFVRLEKGKFASLQPRGDGFGERQIDFKHMFERSLKTHTTLTEGDVLFVRHGRETFEVLVAELKP-----ERAINILNTDLEVDMIPC----------------------EAVAEAKEAD--------------------------------------------KKLEEEAVHAVALAKEKEQWKADKMASLAPEPPAEERLQVKMVLRMPEGQVMRR-FLHLSPLRDVFDFIEALTGEEAQHFQLAATYPRRIF-SVDVAGKSLQDL--DLNGRQETLFVE 383          
BLAST of NO20G01050 vs. NCBI_GenBank
Match: XP_002897907.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY64707.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 128.6 bits (322), Expect = 5.200e-26
Identity = 122/420 (29.05%), Postives = 178/420 (42.38%), Query Frame = 0
Query:   80 LLPFEVEGEGDKITLPPSALESLSKQDALAHGPMLFQLFLVSPTSXXXXXXXXXXXXXXXAGLPPGAR-KTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGEGLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGL-SQVPELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGTELGRTSRGGGHSVGEAMGNEVSPLRMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAITRHM------KMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDEKSYRLVTRFPRRVFCAVETVGQSVEEVLGPGTGKKEMLMYE 492
            L P    G+GDKITLP SALE L+ Q+AL  G   F+L                       G  P  R +THAGVLEF AEE TVGLP KV  SL                               +   ++V+++RLEKG++A  +PK  G   +  + K MLE +L  H+TLT+GD+L V +  + F++ VTEL+P       A+ +++TDL VD                              EA+                                             T+   +++ V+E     +A+TR        KM  L  EP   E   + +V+R P+G   +R F    P Q VF FV+A +  D + +RLV  +PRR+F  +++  +S++E LG   G++E L  E
Sbjct:   82 LRPVPTTGDGDKITLPVSALEELNPQNALDLGVFTFEL---------------SFDDDQQGGEAPTVRSQTHAGVLEFVAEERTVGLPPKVAASLF-------------------------RYTKQLPASIQVRFVRLEKGKFASLRPKGEGFGDRQIDFKHMLERSLKAHTTLTEGDVLFVRHGRETFEVLVTELKPD-----RAINILNTDLEVDMIPC--------------------------EAV---------------------------------------------TKKKEAKKRVEEEAVRTAALTREKELWKANKMANLVPEPRADERLQVKMVLRLPEGQ-STRRFLHASPLQSVFDFVEALTGEDAQYFRLVATYPRRLFW-IDSADKSLQE-LGL-NGRQEALFVE 381          
BLAST of NO20G01050 vs. NCBI_GenBank
Match: POM80265.1 (Ubiquitin fusion degradation protein UFD1 domain containing hypothetical protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 128.3 bits (321), Expect = 6.800e-26
Identity = 114/414 (27.54%), Postives = 175/414 (42.27%), Query Frame = 0
Query:   80 LLPFEVEGEGDKITLPPSALESLSKQDALAHGPMLFQLFLVSPTSXXXXXXXXXXXXXXXAGLPPGARKTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGEGLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGLSQVP-ELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGTELGRTSRGGGHSVGEAMGNEVSPLRMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAIT-RHMKMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDEKSYRLVTRFPRRVFCAVETVGQSVEEVLGPGTGKKEMLMYE 492
            L P    G+GDKITLP SALE L+ Q+AL  G   F+L     +                       + THAGVLEF AEEGTVGLP KV  SL               + K+            +   ++V+++RLEKG++A  QP+  G  +   + K MLE +L  H+TLT+GD+L V +  + F++ V EL+P       A+++++TDL VD                           +V EA   +                                                EE V     A+     +  KM +L  EP   E   + +V+R P+G    R F    P +DVF F++A +  + + ++L   +PRR+F +V+  G+S++++     G++E L  E
Sbjct:   82 LRPVPTTGDGDKITLPVSALEELNPQNALELGVFTFELSFQGQSEMKDGEMVAI------------MKLTHAGVLEFIAEEGTVGLPPKVAASLF-------------SQTKQ------------LPSSIQVRFVRLEKGKFASLQPRGDGFGERQIDFKHMLERSLKTHTTLTEGDVLFVRHGRETFEVLVAELKP-----ERAISILNTDLEVDMIPC----------------------EAVSEAKEAD--------------------------------------------KKLEEEAVRAVALAKEKEQWKADKMASLAPEPPAEERLQVKVVLRMPEGQAMRR-FLHLSPLRDVFDFIEALTGEEAQHFQLAATYPRRIF-SVDVAGKSLQDL--DLNGRQETLFVE 383          
BLAST of NO20G01050 vs. NCBI_GenBank
Match: XP_008902817.1 (hypothetical protein PPTG_09558 [Phytophthora parasitica INRA-310] >ETI51184.1 hypothetical protein F443_05385 [Phytophthora parasitica P1569] >ETK91101.1 hypothetical protein L915_05242 [Phytophthora parasitica] >ETL44474.1 hypothetical protein L916_05197 [Phytophthora parasitica] >ETL97639.1 hypothetical protein L917_05082 [Phytophthora parasitica] >ETN11891.1 hypothetical protein PPTG_09558 [Phytophthora parasitica INRA-310] >ETP20947.1 hypothetical protein F441_05392 [Phytophthora parasitica CJ01A1] >ETP48901.1 hypothetical protein F442_05435 [Phytophthora parasitica P10297])

HSP 1 Score: 123.6 bits (309), Expect = 1.700e-24
Identity = 117/413 (28.33%), Postives = 173/413 (41.89%), Query Frame = 0
Query:   80 LLPFEVEGEGDKITLPPSALESLSKQDALAHGPMLFQLFLVSPTSXXXXXXXXXXXXXXXAGLPPGARKTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGEGLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGL-SQVPELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGTELGRTSRGGGHSVGEAMGNEVSPLRMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAITRHMKMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDEKSYRLVTRFPRRVFCAVETVGQSVEEVLGPGTGKKEMLMYE 492
            L P    G+GDKI LP SALE L+ Q+AL  G   F+L                             R+THAGVLEF A+EGTVGLP KV  SL              +EL                  ++V+++RLEKG++A  QP+  G   +  + K MLE +L  H+TLT+GD+L V +  + F++ V EL+P       A+ +++TDL VD                              EA+  +    R L                                      A +     E E  ++      K+  L  EP   E   + LV+R P+G   +R F    P Q VF +++A +  + + +RLV  +PRR+F  V++  +S++E LG   G++E L  E
Sbjct:   82 LRPVPTTGDGDKIALPVSALEELNPQNALELGVFTFELSFDEDQQGGEASI--------------AKRQTHAGVLEFVADEGTVGLPPKVAASLFRHT----------KELPDS---------------IQVRFVRLEKGKFASLQPRGEGFGDRQIDFKHMLERSLKAHTTLTEGDVLFVRHGRETFEVLVAELKP-----ERAINILNTDLEVDMIPC--------------------------EAVAKKKEAERQL----------------------------------EEEAARAVALAQEKEQWKAG-----KLTKLVPEPPLDERLQVKLVLRMPEGQ-STRRFLHSSPLQSVFDYIEALTGEEARYFRLVATYPRRLF-GVDSADKSLQE-LGL-NGRQEALFVE 381          
BLAST of NO20G01050 vs. NCBI_GenBank
Match: ETM50796.1 (hypothetical protein L914_05198 [Phytophthora parasitica] >ETO79926.1 hypothetical protein F444_05430 [Phytophthora parasitica P1976])

HSP 1 Score: 123.6 bits (309), Expect = 1.700e-24
Identity = 117/413 (28.33%), Postives = 173/413 (41.89%), Query Frame = 0
Query:   80 LLPFEVEGEGDKITLPPSALESLSKQDALAHGPMLFQLFLVSPTSXXXXXXXXXXXXXXXAGLPPGARKTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGEGLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGL-SQVPELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGTELGRTSRGGGHSVGEAMGNEVSPLRMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAITRHMKMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDEKSYRLVTRFPRRVFCAVETVGQSVEEVLGPGTGKKEMLMYE 492
            L P    G+GDKI LP SALE L+ Q+AL  G   F+L                             R+THAGVLEF A+EGTVGLP KV  SL              +EL                  ++V+++RLEKG++A  QP+  G   +  + K MLE +L  H+TLT+GD+L V +  + F++ V EL+P       A+ +++TDL VD                              EA+  +    R L                                      A +     E E  ++      K+  L  EP   E   + LV+R P+G   +R F    P Q VF +++A +  + + +RLV  +PRR+F  V++  +S++E LG   G++E L  E
Sbjct:   82 LRPVPTTGDGDKIALPVSALEELNPQNALELGVFTFELSFDEDQQGGEASI--------------AKRQTHAGVLEFVADEGTVGLPPKVAASLFRHT----------KELPDS---------------IQVRFVRLEKGKFASLQPRGEGFGDRQIDFKHMLERSLKAHTTLTEGDVLFVRHGRETFEVLVAELKP-----ERAINILNTDLEVDMIPC--------------------------EAVAKKKEAERQL----------------------------------EEEAARAVALAQEKEQWKAG-----KLTKLVPEPPLDERLQVKLVLRMPEGQ-STRRFLHSSPLQSVFDYIEALTGEEARYFRLVATYPRRLF-GVDSADKSLQE-LGL-NGRQEALFVE 381          
BLAST of NO20G01050 vs. NCBI_GenBank
Match: KUF84806.1 (Ubiquitin fusion degradation protein 1 [Phytophthora nicotianae])

HSP 1 Score: 123.6 bits (309), Expect = 1.700e-24
Identity = 117/413 (28.33%), Postives = 173/413 (41.89%), Query Frame = 0
Query:   80 LLPFEVEGEGDKITLPPSALESLSKQDALAHGPMLFQLFLVSPTSXXXXXXXXXXXXXXXAGLPPGARKTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGEGLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGL-SQVPELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGTELGRTSRGGGHSVGEAMGNEVSPLRMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAITRHMKMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDEKSYRLVTRFPRRVFCAVETVGQSVEEVLGPGTGKKEMLMYE 492
            L P    G+GDKI LP SALE L+ Q+AL  G   F+L                             R+THAGVLEF A+EGTVGLP KV  SL              +EL                  ++V+++RLEKG++A  QP+  G   +  + K MLE +L  H+TLT+GD+L V +  + F++ V EL+P       A+ +++TDL VD                              EA+  +    R L                                      A +     E E  ++      K+  L  EP   E   + LV+R P+G   +R F    P Q VF +++A +  + + +RLV  +PRR+F  V++  +S++E LG   G++E L  E
Sbjct:   82 LRPVPTTGDGDKIALPVSALEELNPQNALELGVFTFELSFDEDQQGGEASI--------------AKRQTHAGVLEFVADEGTVGLPPKVAASLFRHT----------KELPDS---------------IQVRFVRLEKGKFASLQPRGEGFGDRQIDFKHMLERSLKAHTTLTEGDVLFVRHGRETFEVLVAELKP-----ERAINILNTDLEVDMIPC--------------------------EAVAKKKEAERQL----------------------------------EEEAARAVALAQEKEQWKAG-----KLTXLVPEPPLDERLQVKLVLRMPEGQ-STRRFLHSSPLQSVFDYIEALTGEEARYFRLVATYPRRLF-GVDSADKSLQE-LGL-NGRQEALFVE 381          
BLAST of NO20G01050 vs. NCBI_GenBank
Match: XP_009522997.1 (hypothetical protein PHYSODRAFT_497564 [Phytophthora sojae] >EGZ20280.1 hypothetical protein PHYSODRAFT_497564 [Phytophthora sojae])

HSP 1 Score: 122.9 bits (307), Expect = 2.900e-24
Identity = 127/413 (30.75%), Postives = 178/413 (43.10%), Query Frame = 0
Query:   80 LLPFEVEGEGDKITLPPSALESLSKQDALAHGPMLFQLFLVSPTSXXXXXXXXXXXXXXXAGLPPGARKTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGEGLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGLS-QVPELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGTELGRTSRGGGHSVGEAMGNEVSPLRMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAITRHMKMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDEKSYRLVTRFPRRVFCAVETVGQSVEEVLGPGTGKKEMLMYE 492
            L P     +GDKI+LP SALE L+ Q+AL  G   F+L       XXXXXXXX           P  R THAGVLEF AEEGTVGLP KV  SL G             +L                  V+V+++RLEKG++A  QP+  G S +  + K MLE +L  H+TLT+GD+L V +  + F++ V EL P       AV +++TDL VD                           S   A   E   LR                                        A       E E  ++      K  +L  EP   E   + +V+R  +G   +R F    P ++VF F++A +  D + ++L   +PRR+F  V++  +S++E LG   G++E L  E
Sbjct:   82 LRPVPTASDGDKISLPVSALEELNPQNALERGVFTFELSFEXXXXXXXXXXXXGENV-------PLKRLTHAGVLEFVAEEGTVGLPPKVAASLFG----------QSRQLPDS---------------VQVRFVRLEKGQFASLQPRGDGFSDRQIDFKHMLERSLKAHTTLTEGDVLFVRHGRETFEVLVAELRP-----ERAVNILNTDLEVDIIP------------------------SEAVAKAKEADKLR------------------------------------EEEAARVVAMAQEKEKWKAE-----KTTSLSPEPPLEERLQVKIVLRMTEGQ-STRRFLHSSPLRNVFDFIEALTGEDARHFQLAATYPRRLF-GVDSADKSLQE-LGL-NGRQEALFVE 388          
BLAST of NO20G01050 vs. NCBI_GenBank
Match: CCA14777.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA26767.1 conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 121.7 bits (304), Expect = 6.400e-24
Identity = 108/403 (26.80%), Postives = 175/403 (43.42%), Query Frame = 0
Query:   77 SVALLPFEVEGEGDKITLPPSALESLSKQDALAHGPMLFQLFLVSPTSXXXXXXXXXXXXXXXAGLPPGARKTHAGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGEGLWNIVGCMVRVKYIRLEKGRYAKFQPKTGGL-SQVPELKGMLEMNLLKHSTLTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDXXXXXXXXXXXXXRGTELGRTSRGGGHSVGEAMGNEVSPLRMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRNATSEEGVDEPENARSAITRHMKMDALGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDEKSYRLVTRFPRRVF-CAVETVGQSVEEV 478
            S +L P  +  +GD ITLPPSALE L+ Q+A   G   F+L ++ P                   + P  + THA VLEF+AEE T+G+P KV + LL             + + K                ++++++RLE+G +A+FQPK  G  ++  +LK +LE +L +H+TLT GD + V +  K F++ V   EP E     A+ +++TDL VD                              EA+  ++  ++M                                     RN        E +     + +  +++AL  EP  SE+  + +V+R PDG V SR FR       V+ F+++ S     + +LV  FPR+ +    E + +S+EE+
Sbjct:   79 SCSLKPVPISSDGDLITLPPSALEELTAQEAFRVGKFTFELSVMLP------------------NVAPCLQVTHASVLEFTAEEETIGVPPKVARCLL-----------FSQSVPKS---------------IQIRFVRLERGLFARFQPKEEGFGAREIDLKLVLERSLHRHTTLTIGDTVLVRHGRKTFEISVIHAEPEE-----AIDILNTDLEVDIMP--------------------------SEAVVKQLESMKM----------------------------QKETELEAKRNL-------EKQKQEKELLKSERVNALPPEPPLSEKEAVKVVLRHPDG-VYSRRFRSTSLLAHVYEFLESCSGELASNNQLVNTFPRKSYPNEKEWLDKSLEEL 370          
The following BLAST results are available for this feature:
BLAST of NO20G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22112.19.700e-6546.98ubiquitin fusion degradaton [Nannochloropsis gadit... [more]
CBJ31340.11.300e-3234.27conserved unknown protein [Ectocarpus siliculosus][more]
POM68778.14.000e-2627.54Hypothetical protein PHPALM_15016 [Phytophthora pa... [more]
XP_002897907.15.200e-2629.05conserved hypothetical protein [Phytophthora infes... [more]
POM80265.16.800e-2627.54Ubiquitin fusion degradation protein UFD1 domain c... [more]
XP_008902817.11.700e-2428.33hypothetical protein PPTG_09558 [Phytophthora para... [more]
ETM50796.11.700e-2428.33hypothetical protein L914_05198 [Phytophthora para... [more]
KUF84806.11.700e-2428.33Ubiquitin fusion degradation protein 1 [Phytophtho... [more]
XP_009522997.12.900e-2430.75hypothetical protein PHYSODRAFT_497564 [Phytophtho... [more]
CCA14777.16.400e-2426.80conserved hypothetical protein [Albugo laibachii N... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002634NSK002634Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01050.1NO20G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631466gene_6318Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100060g17gene8314Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01050.1NO20G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01050 ID=NO20G01050|Name=NO20G01050|organism=Nannochloropsis oceanica|type=gene|length=2077bp
AAAGAGAACTGCAAATATATCTGTGACGGGGGTGATGGTGGGCGTGTGGG
TAGATTTGTGGCTTTGATATGAGCGTAAAAAGAGGACAAAGTTTTGTTCC
ACCGCTGGAGATGGAAGAACGAGAACGATGACGATATGCTACGCAACGTC
TTCGCGTGTTCGAGAATGTCTCTCTCACTCCACACAACACATTCACTGAC
AGGTTCACCGCCAGCAGCGGCAATATAGACGACGTCTTGGTCTGTCTGCC
ATTTCGTGATTTCCCACCCCTTCTGGTCTAGTCGTCGGCCTCTTCTCCGT
CTCCACACCCCAGCAAGCCTCACCTCACTCGTTCAAAGTACGCCCCACTC
GTCCAACCCGCCGAAACTGAAAACCATGGACTTCGACCGCAGCGTTTCCA
AGCTCAAAAAGGAGCAGGAGAAGCGACGGGCTGAAGCATTGCGCAAGGCG
GAACGgtacgtcgctatgtgtgtatgtacgtccttccttctcaagcctcc
ctaactgtgacctcaagctctgtgctggttccgtgaacgcaccgcattaa
ctatcctcattccttataccccggtcccacatttcattagTGAACGCAAA
GCTCAAGAAGAGGCCCAAAGGCAGCACGCCCTCATCCAACAAGCCGTTGA
AACCCGGCGTCGGGAACAACTTGAAAAGGAAGAGCACGACAGGCTCGCCG
TAGAAGAAGAACGGAGGATCACTGCGGGCATTAACTATAGCGTGGCTCTA
CTTCCCTTTGAAGTTGAGGGAGAGGGTGACAAGATCACTCTCCCACCAAG
CGCCCTGGAAAGTTTGAGCAAGCAAGACGCCCTGGCCCACGGACCGATGT
TGTTTCAGCTTTTCCTGGTCTCTCCTACATCAGCAACAACAACAGCAGGA
GCCAGAGGGGGCGGAGGAGGAGAAAAGGCAGGGCTGCCGCCAGGGGCGAG
GAAGACACATGCAGGGGTGTTGGAATTCTCGGCAGAGGAGGGAACGGTGG
GCTTACCACTCAAAGTTCGCAAGAGCCTTTTAGGGGGCGTTGGTGGTAGT
GGTGGTGGTACTGTTGCTGGGGAAGAATTGAAGAAAGGACAGGGGGGAGG
AGGAGAGGGTTTGTGGAATATAGTTGGGTGTATGGTCCGTGTCAAATACA
TTCGGTTGGAGAAAGGCAGGTATGCCAAGTTTCAGCCCAAGACGGGGGGG
CTATCGCAAGTCCCTGAACTGAAGGGAATGCTGGAAATGAATTTACTGAA
GCACTCCACTTTGACCAAAGGCGATCTATTGCAGGTCTGGTACAGGGGCA
AGTGCTTCGATTTAAAGGTAACTGAGTTGGAGCCTATAGAGGCAATGGGC
TTGCATGCAGTGACGGTGATCGATACGGATCTAACGGTTGATGTGGACGT
GCCGGAGGAGCAGGTGGAGAAGGAAAAGGAGCGAGGGACGGAGTTGGGGA
GGACTTCAAGAGGCGGAGGCCACTCTGTGGGTGAAGCGATGGGGAATGAG
GTCTCACCACTACGGATGTTGGGGGGGAGTAGCAGCATAAGTGGTCGTGG
AGGAGGCGGAGGAGGCGGAGGAGGTGGAGGAGGCGGGGGCGGAGGGAAGA
AGCTGGGGGGCAGTGGGACAACCCCGACGAGGAATGCGACTTCAGAAGAA
GGCGTGGACGAACCAGAAAATGCCCGTAGCGCGATAACGAGACACATGAA
AATGGATGCCCTTGGGTTGGAACCGACCGAGAGTGAAGAGGGGGTGATTA
GCTTGGTGGTGCGAAAGCCAGATGGGTCTGTGAAGAGCAGACTCTTCCGA
AAGCACCAGCCTTTCCAGGACGTGTTTCGTTTTGTTGATGCCTTTTCTGT
GTCCGACGAAAAGAGTTACCGCTTGGTCACTCGCTTTCCACGGCGGGTGT
TTTGTGCGGTTGAGACGGTGGGCCAGAGCGTCGAGGAGGTTTTGGGGCCA
GGGACGGGGAAGAAGGAGATGCTCATGTACGAGGCGTGTTGAGCGGGGAA
GGAGGGAAAGAGGGCATAGCAATGTAGTGTGCATAGAGCGACGAAGGGGT
AGCAGTACATATTTATTGCGGCAAAGT
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protein sequence of NO20G01050.1

>NO20G01050.1-protein ID=NO20G01050.1-protein|Name=NO20G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=494bp
MDFDRSVSKLKKEQEKRRAEALRKAERERKAQEEAQRQHALIQQAVETRR
REQLEKEEHDRLAVEEERRITAGINYSVALLPFEVEGEGDKITLPPSALE
SLSKQDALAHGPMLFQLFLVSPTSATTTAGARGGGGGEKAGLPPGARKTH
AGVLEFSAEEGTVGLPLKVRKSLLGGVGGSGGGTVAGEELKKGQGGGGEG
LWNIVGCMVRVKYIRLEKGRYAKFQPKTGGLSQVPELKGMLEMNLLKHST
LTKGDLLQVWYRGKCFDLKVTELEPIEAMGLHAVTVIDTDLTVDVDVPEE
QVEKEKERGTELGRTSRGGGHSVGEAMGNEVSPLRMLGGSSSISGRGGGG
GGGGGGGGGGGGKKLGGSGTTPTRNATSEEGVDEPENARSAITRHMKMDA
LGLEPTESEEGVISLVVRKPDGSVKSRLFRKHQPFQDVFRFVDAFSVSDE
KSYRLVTRFPRRVFCAVETVGQSVEEVLGPGTGKKEMLMYEAC*
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Synonyms
Publications