NO20G01040, NO20G01040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01040 vs. NCBI_GenBank
Match: EWM22120.1 (adp-ribosylation factor-like protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 334.0 bits (855), Expect = 3.100e-88 Identity = 164/186 (88.17%), Postives = 172/186 (92.47%), Query Frame = 0 Query: 1 MGLLSILKKVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFML 187 MGLLSILKKVK+KEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLE QGY+LNVWDVGGQQTIRSYWRNYFEATDGL+WVVDSADRRRLE+C+ ELHALL QEKLAGASLL+ ANKQDL GAL GEIA LGLE EAF KGRHWTIVGCSA+TG GLE G+GWMV DIASRIFML Sbjct: 1 MGLLSILKKVKRKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLEYQGYLLNVWDVGGQQTIRSYWRNYFEATDGLIWVVDSADRRRLEVCRQELHALLQQEKLAGASLLVFANKQDLQGALPPGEIALTLGLEDEAFAKGRHWTIVGCSAMTGDGLEHGVGWMVRDIASRIFML 186
BLAST of NO20G01040 vs. NCBI_GenBank
Match: CBN75893.1 (ARL2, ARF-like Ras superfamily GTPase [Ectocarpus siliculosus]) HSP 1 Score: 292.7 bits (748), Expect = 7.900e-76 Identity = 144/187 (77.01%), Postives = 162/187 (86.63%), Query Frame = 0 Query: 1 MGLLSILKKVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFMLA 188 MGLLSILKKVKQKEKE+RLLILGLDNAGKTTI+KKFNG++I+ IEPTLGFNIKT+E +GY LNVWDVGGQQTIRSYWRNYFE TDGL+WVVDSADR RL+ CK ELH LL QEKLAGASLL+ ANKQDL GAL EIA LGLES+ F RHW+IV CSAVTG+GL G+ WMV+DI +RIFM++ Sbjct: 1 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLLVFANKQDLVGALGAAEIAQVLGLESKQFA-NRHWSIVACSAVTGEGLAQGVDWMVSDIGARIFMMS 186
BLAST of NO20G01040 vs. NCBI_GenBank
Match: OWZ19120.1 (ADP-ribosylation factor protein [Phytophthora megakarya]) HSP 1 Score: 278.5 bits (711), Expect = 1.500e-71 Identity = 138/186 (74.19%), Postives = 161/186 (86.56%), Query Frame = 0 Query: 1 MGLLSILKKVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFML 187 MGLLSILKKVK+KEKE+R+L+LGLDNAGKTTILKKF G++I+ I PTLGF+I+TLE + + LNVWDVGGQQTIRSYWRNYFE TDG+VWVVDSADRRRLE CK EL +LL QEKLAGA+LLI ANKQDL GAL+ EIA ALGL S F+ RHW+I+ CSAVTG+GL DGI W+V D+ASRIF++ Sbjct: 1 MGLLSILKKVKEKEKELRVLVLGLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKDFKLNVWDVGGQQTIRSYWRNYFEQTDGIVWVVDSADRRRLEDCKRELTSLLTQEKLAGATLLIFANKQDLPGALSSAEIADALGLHSTQFST-RHWSIISCSAVTGEGLVDGIDWLVGDVASRIFLM 185
BLAST of NO20G01040 vs. NCBI_GenBank
Match: XP_008890348.1 (ADP-ribosylation factor-like protein 2 [Phytophthora parasitica INRA-310] >ETN24267.1 ADP-ribosylation factor-like protein 2 [Phytophthora parasitica INRA-310]) HSP 1 Score: 277.3 bits (708), Expect = 3.400e-71 Identity = 139/186 (74.73%), Postives = 160/186 (86.02%), Query Frame = 0 Query: 1 MGLLSILKKVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFML 187 MGLLSILKKVK+KEKE+R+L+LGLDNAGKTTILKKF G++I+ I PTLGF+I+TLE + + LNVWDVGGQQTIRSYWRNYFE TDGLVWVVDSADRRRLE CK EL +LL QEKLAGA+LLI ANKQDL GAL+ EIA ALGL S F+ RHW+I+ CSAVTG GL DGI W+V D+ASRIF++ Sbjct: 1 MGLLSILKKVKEKEKEIRVLMLGLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKDFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEDCKRELTSLLTQEKLAGATLLIFANKQDLPGALSSAEIADALGLRSAQFST-RHWSIISCSAVTGDGLVDGIDWLVGDVASRIFLM 185
BLAST of NO20G01040 vs. NCBI_GenBank
Match: XP_009523297.1 (hypothetical protein PHYSODRAFT_313188 [Phytophthora sojae] >EGZ20580.1 hypothetical protein PHYSODRAFT_313188 [Phytophthora sojae]) HSP 1 Score: 276.9 bits (707), Expect = 4.500e-71 Identity = 138/186 (74.19%), Postives = 160/186 (86.02%), Query Frame = 0 Query: 1 MGLLSILKKVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFML 187 MGLLSILKKVK+KEKE+R+L+LGLDNAGKTTILKKF G++I+ I PTLGF+I+TLE + + LNVWDVGGQQTIRSYWRNYFE TDGLVWVVDSADRRRLE CK EL +LL QEKLAGA+LLI ANKQDL GAL+ EIA ALGL + F+ RHW+I+ CSAVTG GL DGI W+V D+ASRIF++ Sbjct: 1 MGLLSILKKVKEKEKEIRVLMLGLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKDFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEDCKRELASLLTQEKLAGATLLIFANKQDLAGALSSAEIADALGLRAAQFST-RHWSIISCSAVTGDGLVDGIDWLVADVASRIFLM 185
BLAST of NO20G01040 vs. NCBI_GenBank
Match: ETI56799.1 (ADP-ribosylation factor-like protein 2 [Phytophthora parasitica P1569] >ETK96583.1 ADP-ribosylation factor-like protein 2 [Phytophthora parasitica] >ETL49942.1 ADP-ribosylation factor-like protein 2 [Phytophthora parasitica] >ETM03017.1 ADP-ribosylation factor-like protein 2 [Phytophthora parasitica] >ETM56267.1 ADP-ribosylation factor-like protein 2 [Phytophthora parasitica] >ETO85527.1 ADP-ribosylation factor-like protein 2 [Phytophthora parasitica P1976] >ETP26581.1 ADP-ribosylation factor-like protein 2 [Phytophthora parasitica CJ01A1] >ETP54581.1 ADP-ribosylation factor-like protein 2 [Phytophthora parasitica P10297]) HSP 1 Score: 276.9 bits (707), Expect = 4.500e-71 Identity = 139/186 (74.73%), Postives = 159/186 (85.48%), Query Frame = 0 Query: 1 MGLLSILKKVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFML 187 MGLLSILKKVK+KEKE+R+L+LGLDNAGKTTILKKF G++I+ I PTLGF+I+TLE + + LNVWDVGGQQTIRSYWRNYFE TDGLVWVVDSADRRRLE CK EL +LL QEKLAGA+LLI ANKQDL GAL+ EIA ALGL S F+ RHW I+ CSAVTG GL DGI W+V D+ASRIF++ Sbjct: 1 MGLLSILKKVKEKEKEIRVLMLGLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKDFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEDCKRELTSLLTQEKLAGATLLIFANKQDLPGALSSAEIADALGLRSAQFST-RHWNIISCSAVTGDGLVDGIDWLVGDVASRIFLM 185
BLAST of NO20G01040 vs. NCBI_GenBank
Match: OQR91515.1 (ADP-ribosylation factor 2 [Achlya hypogyna]) HSP 1 Score: 275.4 bits (703), Expect = 1.300e-70 Identity = 140/186 (75.27%), Postives = 156/186 (83.87%), Query Frame = 0 Query: 1 MGLLSILKKVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFML 187 MGLL+ILKKVKQKEKE+R+L+LGLDNAGKTTILKKF GE+ISTI PTLGF+I+TLE + + LNVWDVGGQQTIRSYWRNYFE TDGLVWVVDSADRRR+E CK EL +LL QEKL GA+LLI ANKQDL GAL+ EI ALGL F + RHW I CSA TG GL DGI WMVTDIA+RI+ML Sbjct: 1 MGLLTILKKVKQKEKEVRILVLGLDNAGKTTILKKFMGEDISTISPTLGFDIQTLEYKQFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRMEDCKRELASLLTQEKLTGATLLIFANKQDLPGALSPEEIVAALGLHDAQF-ENRHWKIQSCSAFTGDGLVDGIDWMVTDIANRIYML 185
BLAST of NO20G01040 vs. NCBI_GenBank
Match: XP_008866365.1 (hypothetical protein H310_04027 [Aphanomyces invadans] >ETW04927.1 hypothetical protein H310_04027 [Aphanomyces invadans]) HSP 1 Score: 273.9 bits (699), Expect = 3.800e-70 Identity = 139/186 (74.73%), Postives = 155/186 (83.33%), Query Frame = 0 Query: 1 MGLLSILKKVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFML 187 MGLL+ILKKVKQKEKE+R+L+LGLDNAGKTTILKKF G++I++I PTLGF+I+TLE + Y LNVWDVGGQQTIRSYWRNYFE TDGLVWVVDSADRRRLE CK EL ALL QEKLAGA+LLI ANKQDL GAL+ +I ALGL F RHW I CSA TG GL DGI WMV DI++RIFML Sbjct: 22 MGLLTILKKVKQKEKELRILMLGLDNAGKTTILKKFMGQDITSISPTLGFDIQTLEYKQYKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEACKRELMALLTQEKLAGATLLIFANKQDLPGALSPEDIVLALGLHERQFA-NRHWKIQSCSAFTGDGLADGIDWMVNDISNRIFML 206
BLAST of NO20G01040 vs. NCBI_GenBank
Match: XP_002288797.1 (ADP ribosylation factor-like protein 2, partial [Thalassiosira pseudonana CCMP1335] >EED94233.1 ADP ribosylation factor-like protein 2, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 272.7 bits (696), Expect = 8.500e-70 Identity = 133/179 (74.30%), Postives = 153/179 (85.47%), Query Frame = 0 Query: 9 KVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFMLA 188 KVK+KEKE+R+LILGLDNAGKTTIL+KF GE I TIEPTLGFNIKTLE + Y LNVWDVGGQ+TIR+YWRNYFE TDGL+WVVDSAD+ RLEICK EL LL QEKLAGASLLILANKQD+ GAL +IA+ LGL+ + + RHW+I GCSAVTG+GL +G+ WMV DIASRIFML+ Sbjct: 1 KVKEKEKEVRILILGLDNAGKTTILRKFCGESIDTIEPTLGFNIKTLEHKNYQLNVWDVGGQKTIRAYWRNYFERTDGLIWVVDSADQARLEICKKELTNLLSQEKLAGASLLILANKQDVRGALCADDIANTLGLKEDVSFENRHWSIRGCSAVTGEGLVEGMDWMVDDIASRIFMLS 179
BLAST of NO20G01040 vs. NCBI_GenBank
Match: XP_008606146.1 (ADP-ribosylation factor-like protein 2 [Saprolegnia diclina VS20] >EQC40447.1 ADP-ribosylation factor-like protein 2 [Saprolegnia diclina VS20]) HSP 1 Score: 271.2 bits (692), Expect = 2.500e-69 Identity = 137/186 (73.66%), Postives = 157/186 (84.41%), Query Frame = 0 Query: 1 MGLLSILKKVKQKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLECQGYVLNVWDVGGQQTIRSYWRNYFEATDGLVWVVDSADRRRLEICKMELHALLHQEKLAGASLLILANKQDLHGALAVGEIAHALGLESEAFTKGRHWTIVGCSAVTGQGLEDGIGWMVTDIASRIFML 187 MGLL+ILKKVKQKEKE+R+L+LGLDNAGKTTI+KKF G++I+TI PTLGF+I+TLE + + LNVWDVGGQQTIRSYWRNYFE TDGLVWVVDSADRRR++ CK EL ALL QEKL GA+LLI ANKQDL GAL+ EI ALGL EA + RHW I CSA TG GL DGI WMVTDIA+RI++L Sbjct: 1 MGLLTILKKVKQKEKEVRILVLGLDNAGKTTIIKKFMGQDITTISPTLGFDIQTLEYKQFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRMDDCKRELAALLTQEKLTGATLLIFANKQDLPGALSPDEIVVALGLH-EAQFENRHWKIQSCSAFTGDGLVDGIDWMVTDIANRIYLL 185 The following BLAST results are available for this feature:
BLAST of NO20G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01040 ID=NO20G01040|Name=NO20G01040|organism=Nannochloropsis oceanica|type=gene|length=3594bpback to top protein sequence of NO20G01040.1 >NO20G01040.1-protein ID=NO20G01040.1-protein|Name=NO20G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=188bpback to top Synonyms
Publications
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