NO20G01010, NO20G01010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01010 vs. NCBI_GenBank
Match: EWM22134.1 (atp-dependent rna helicase dbp4 [Nannochloropsis gaditana]) HSP 1 Score: 730.7 bits (1885), Expect = 4.800e-207 Identity = 371/486 (76.34%), Postives = 410/486 (84.36%), Query Frame = 0 Query: 65 METLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDAR--------------------------------GDRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDEEGG 519 ME LRKRVV EAPAPG+Q F++ G K F+ LPLS++TL+GL +N F+ MTDIQL AVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGW+LSDGLGALIITPTRELALQIFEVLR+VGKGHMFSAALLTGGKKEFREEQ RVPRMNIIVATPGRLLQHLEETPGFDA RQTLLFSATQTKSV DLARLSL + +YVGVHD + HATPD+LVQNY+++ L +K+D LW+F+KSHMKHK+VVF SSCSQVRYV+ CFR +QPGVPLLALHGKIKQARRT IYF+FVRRPAAVLFATDIAARGLDFPACDWVVQVDAPED AMYIHRVGRTARY+SGGRSLLFL PSEE GML+RL+ AHVP+ R+T+NPSKTTSV+QKTAAVVASN ECKRLA KAF SYLRSVALMP KD+F++S LD+EAFAD+LGL KCPSTKFLK LK+ GG Sbjct: 1 MELLRKRVVAEAPAPGTQLFVEGGGPGKAFRDLPLSRITLQGLDRNKFSAMTDIQLAAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWALSDGLGALIITPTRELALQIFEVLRTVGKGHMFSAALLTGGKKEFREEQARVPRMNIIVATPGRLLQHLEETPGFDASQLQVLVLDEADRILDMGFSRQLNAILAYLPPGAGRQTLLFSATQTKSVKDLARLSLDKNSEYVGVHDTAAHATPDRLVQNYLVAALADKMDTLWAFIKSHMKHKLVVFFSSCSQVRYVHACFRALQPGVPLLALHGKIKQARRTHIYFEFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDTAMYIHRVGRTARYRSGGRSLLFLLPSEEGGMLRRLEAAHVPISRVTVNPSKTTSVRQKTAAVVASNPECKRLAQKAFVSYLRSVALMPLKDVFDISALDVEAFADALGLSKCPSTKFLKALKEGRGG 486
BLAST of NO20G01010 vs. NCBI_GenBank
Match: XP_008901471.1 (hypothetical protein PPTG_08278 [Phytophthora parasitica INRA-310] >ETN13451.1 hypothetical protein PPTG_08278 [Phytophthora parasitica INRA-310] >KUG00952.1 ATP-dependent RNA helicase dbp4 [Phytophthora nicotianae]) HSP 1 Score: 546.6 bits (1407), Expect = 1.300e-151 Identity = 295/535 (55.14%), Postives = 374/535 (69.91%), Query Frame = 0 Query: 50 SAAAEEKRQGMRVKEMETLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDA--------------------------------RGDRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDEE---GGXXXXXXVRAKKNKSRALERLKEKIKMERAVK 550 S A+ K+ E+E L R+ E+ PA GSQ + +F PLS+ + +GL FT T IQ+GA+PHALAGRDVL AAKTGSGKTLAF++P+LEKL+R WS+ DGLGAL+I+PTRELALQIFEVLR+VGK H FSA L+ GG K FREEQ R+ RMN++V TPGRLLQH+E+TP FDA G+RQT+LFSATQTKSV DLA LSL E P+YV VH+ S +ATP L Q+YV++PLE KLD+L SF+KSH+K K +VFLS+C QVR+V+ F +QPG+PL ALHGK KQ +R ++Y++F+ +PAAVLFATDIAARGLDFP DWV+Q+D PEDAA YIHRVGRTARY G++L+ L PSE +GM+KRL+ A VP++ +NP+KTTS +QK A+VVA + E K LA KAF SY+RSV L P +++F+ + L L+AFA+SLGLP P FL +K E G +R KKN +R L++LKEKIK E+ K Sbjct: 26 SDTAKLKQNERERLEIEKLEARIAEQTPARGSQL-----GEAASFDLFPLSEASRRGLRTCGFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVISPTRELALQIFEVLRNVGKAHAFSAGLVIGG-KNFREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLRE-PEYVAVHEHSANATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTTSCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSKMKAEHENGGNEALREELRGKKNVNRKLQQLKEKIKAEKERK 553
BLAST of NO20G01010 vs. NCBI_GenBank
Match: ETI52662.1 (hypothetical protein F443_04276 [Phytophthora parasitica P1569]) HSP 1 Score: 546.2 bits (1406), Expect = 1.700e-151 Identity = 295/535 (55.14%), Postives = 373/535 (69.72%), Query Frame = 0 Query: 50 SAAAEEKRQGMRVKEMETLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDA--------------------------------RGDRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDEE---GGXXXXXXVRAKKNKSRALERLKEKIKMERAVK 550 S A+ K+ E+E L R+ E+ PA GSQ + F PLS+ + +GL FT T IQ+GA+PHALAGRDVL AAKTGSGKTLAF++P+LEKL+R WS+ DGLGAL+I+PTRELALQIFEVLR+VGK H FSA L+ GG K FREEQ R+ RMN++V TPGRLLQH+E+TP FDA G+RQT+LFSATQTKSV DLA LSL E P+YV VH+ S +ATP L Q+YV++PLE KLD+L SF+KSH+K K +VFLS+C QVR+V+ F +QPG+PL ALHGK KQ +R ++Y++F+ +PAAVLFATDIAARGLDFP DWV+Q+D PEDAA YIHRVGRTARY G++L+ L PSE +GM+KRL+ A VP++ +NP+KTTS +QK A+VVA + E K LA KAF SY+RSV L P +++F+ + L L+AFA+SLGLP P FL +K E G +R KKN +R L++LKEKIK E+ K Sbjct: 26 SDTAKLKQNERERLEIEKLEARIAEQTPARGSQL-----GEAANFDLFPLSEASRRGLRTCGFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVISPTRELALQIFEVLRNVGKAHAFSAGLVIGG-KNFREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLRE-PEYVAVHEHSANATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTTSCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSKMKAEHENGGNEALREELRGKKNVNRKLQQLKEKIKAEKERK 553
BLAST of NO20G01010 vs. NCBI_GenBank
Match: ETK92536.1 (hypothetical protein L915_04132 [Phytophthora parasitica] >ETL45943.1 hypothetical protein L916_04087 [Phytophthora parasitica] >ETP22368.1 hypothetical protein F441_04223 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 546.2 bits (1406), Expect = 1.700e-151 Identity = 294/535 (54.95%), Postives = 374/535 (69.91%), Query Frame = 0 Query: 50 SAAAEEKRQGMRVKEMETLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDA--------------------------------RGDRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDEE---GGXXXXXXVRAKKNKSRALERLKEKIKMERAVK 550 S A+ K+ E+E L R+ E+ PA GSQ + +F PLS+ + +GL FT T IQ+GA+PHALAGRDVL AAKTGSGKTLAF++P+LEKL+R WS+ DGLGAL+++PTRELALQIFEVLR+VGK H FSA L+ GG K FREEQ R+ RMN++V TPGRLLQH+E+TP FDA G+RQT+LFSATQTKSV DLA LSL E P+YV VH+ S +ATP L Q+YV++PLE KLD+L SF+KSH+K K +VFLS+C QVR+V+ F +QPG+PL ALHGK KQ +R ++Y++F+ +PAAVLFATDIAARGLDFP DWV+Q+D PEDAA YIHRVGRTARY G++L+ L PSE +GM+KRL+ A VP++ +NP+KTTS +QK A+VVA + E K LA KAF SY+RSV L P +++F+ + L L+AFA+SLGLP P FL +K E G +R KKN +R L++LKEKIK E+ K Sbjct: 26 SDTAKLKQNERERLEIEKLEARIAEQTPARGSQL-----GEAASFDLFPLSEASRRGLRTCGFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVVSPTRELALQIFEVLRNVGKAHAFSAGLVIGG-KNFREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLRE-PEYVAVHEHSANATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTTSCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSKMKAEHENGGNEALREELRGKKNVNRKLQQLKEKIKAEKERK 553
BLAST of NO20G01010 vs. NCBI_GenBank
Match: ETO81304.1 (hypothetical protein F444_04332 [Phytophthora parasitica P1976]) HSP 1 Score: 546.2 bits (1406), Expect = 1.700e-151 Identity = 294/535 (54.95%), Postives = 374/535 (69.91%), Query Frame = 0 Query: 50 SAAAEEKRQGMRVKEMETLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDA--------------------------------RGDRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDEE---GGXXXXXXVRAKKNKSRALERLKEKIKMERAVK 550 S A+ K+ E+E L R+ E+ PA GSQ + +F PLS+ + +GL FT T IQ+GA+PHALAGRDVL AAKTGSGKTLAF++P+LEKL+R WS+ DGLGAL+++PTRELALQIFEVLR+VGK H FSA L+ GG K FREEQ R+ RMN++V TPGRLLQH+E+TP FDA G+RQT+LFSATQTKSV DLA LSL E P+YV VH+ S +ATP L Q+YV++PLE KLD+L SF+KSH+K K +VFLS+C QVR+V+ F +QPG+PL ALHGK KQ +R ++Y++F+ +PAAVLFATDIAARGLDFP DWV+Q+D PEDAA YIHRVGRTARY G++L+ L PSE +GM+KRL+ A VP++ +NP+KTTS +QK A+VVA + E K LA KAF SY+RSV L P +++F+ + L L+AFA+SLGLP P FL +K E G +R KKN +R L++LKEKIK E+ K Sbjct: 26 SDTAKLKQNERERLEIEKLEARIAEQTPARGSQL-----GEAASFDLFPLSEASRRGLRTCGFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVVSPTRELALQIFEVLRNVGKAHAFSAGLVIGG-KNFREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLRE-PEYVAVHEHSANATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTTSCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSKMKAEHENGGNEALREELRGKKNVNRKLQQLKEKIKAEKERK 553
BLAST of NO20G01010 vs. NCBI_GenBank
Match: ETM52267.1 (hypothetical protein L914_04099 [Phytophthora parasitica]) HSP 1 Score: 545.8 bits (1405), Expect = 2.200e-151 Identity = 294/535 (54.95%), Postives = 373/535 (69.72%), Query Frame = 0 Query: 50 SAAAEEKRQGMRVKEMETLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDA--------------------------------RGDRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDEE---GGXXXXXXVRAKKNKSRALERLKEKIKMERAVK 550 S A+ K+ E+E L R+ E+ PA GSQ + F PLS+ + +GL FT T IQ+GA+PHALAGRDVL AAKTGSGKTLAF++P+LEKL+R WS+ DGLGAL+++PTRELALQIFEVLR+VGK H FSA L+ GG K FREEQ R+ RMN++V TPGRLLQH+E+TP FDA G+RQT+LFSATQTKSV DLA LSL E P+YV VH+ S +ATP L Q+YV++PLE KLD+L SF+KSH+K K +VFLS+C QVR+V+ F +QPG+PL ALHGK KQ +R ++Y++F+ +PAAVLFATDIAARGLDFP DWV+Q+D PEDAA YIHRVGRTARY G++L+ L PSE +GM+KRL+ A VP++ +NP+KTTS +QK A+VVA + E K LA KAF SY+RSV L P +++F+ + L L+AFA+SLGLP P FL +K E G +R KKN +R L++LKEKIK E+ K Sbjct: 26 SDTAKLKQNERERLEIEKLEARIAEQTPARGSQL-----GEAANFDLFPLSEASRRGLRTCGFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVVSPTRELALQIFEVLRNVGKAHAFSAGLVIGG-KNFREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLRE-PEYVAVHEHSANATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTTSCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSKMKAEHENGGNEALREELRGKKNVNRKLQQLKEKIKAEKERK 553
BLAST of NO20G01010 vs. NCBI_GenBank
Match: ETL99117.1 (hypothetical protein L917_03988 [Phytophthora parasitica]) HSP 1 Score: 544.3 bits (1401), Expect = 6.400e-151 Identity = 293/535 (54.77%), Postives = 374/535 (69.91%), Query Frame = 0 Query: 50 SAAAEEKRQGMRVKEMETLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDA--------------------------------RGDRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDEE---GGXXXXXXVRAKKNKSRALERLKEKIKMERAVK 550 S A+ K+ E+E L R+ E+ PA GSQ + +F PLS+ + +GL FT T IQ+GA+PHALAGRDVL AAKTGSGKTLAF++P+LEKL+R WS+ DGLGAL+++PTRELALQIFEVLR+VGK H FSA L+ GG K FREEQ R+ RMN++V TPGRLLQH+E+TP FDA G+RQT+LFSATQTKSV DLA LSL E P+YV VH+ S +ATP L Q+YV++PLE KLD+L SF+KSH+K K +VFLS+C QVR+V+ F +QPG+PL ALHGK KQ +R ++Y++F+ +PAAVLFATDIAARGLDFP DWV+Q+D PEDAA +IHRVGRTARY G++L+ L PSE +GM+KRL+ A VP++ +NP+KTTS +QK A+VVA + E K LA KAF SY+RSV L P +++F+ + L L+AFA+SLGLP P FL +K E G +R KKN +R L++LKEKIK E+ K Sbjct: 26 SDTAKLKQNERERLEIEKLEARIAEQTPARGSQL-----GEAASFDLFPLSEASRRGLRTCGFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVVSPTRELALQIFEVLRNVGKAHAFSAGLVIGG-KNFREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLRE-PEYVAVHEHSANATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANHIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTTSCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSKMKAEHENGGNEALREELRGKKNVNRKLQQLKEKIKAEKERK 553
BLAST of NO20G01010 vs. NCBI_GenBank
Match: ETP50249.1 (hypothetical protein F442_04243 [Phytophthora parasitica P10297]) HSP 1 Score: 543.9 bits (1400), Expect = 8.400e-151 Identity = 293/535 (54.77%), Postives = 373/535 (69.72%), Query Frame = 0 Query: 50 SAAAEEKRQGMRVKEMETLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDA--------------------------------RGDRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDEE---GGXXXXXXVRAKKNKSRALERLKEKIKMERAVK 550 S A+ K+ E+E L R+ E+ PA GSQ + +F PLS+ + +GL FT T IQ+GA+PHALAGRDVL AAKTGSGKTLAF++P+LEKL+R WS+ DGLGAL+++PTRELALQIFEVLR+VGK H FSA L+ GG K FREEQ R+ RMN++V TPGRLLQH+E+TP FDA G+RQT+LFSATQTKSV DLA LSL E P+YV VH+ S +ATP L Q+YV++PLE KLD+L SF+KSH+K K +VFLS+C QVR+V+ F +QPG+PL ALHGK KQ +R ++Y++F+ +PAAVLFATDIAARGLDFP DWV+Q+D PEDAA YIHRVGRTARY G++L+ L PSE +GM+KRL+ A VP++ +NP+KTTS +QK A+VVA + E K LA KAF SY+R V L P +++F+ + L L+AFA+SLGLP P FL +K E G +R KKN +R L++LKEKIK E+ K Sbjct: 26 SDTAKLKQNERERLEIEKLEARIAEQTPARGSQL-----GEAASFDLFPLSEASRRGLRTCGFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVVSPTRELALQIFEVLRNVGKAHAFSAGLVIGG-KNFREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLRE-PEYVAVHEHSANATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTTSCRQKVASVVAGDKEIKALAQKAFMSYVRYVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSKMKAEHENGGNEALREELRGKKNVNRKLQQLKEKIKAEKERK 553
BLAST of NO20G01010 vs. NCBI_GenBank
Match: GAX97157.1 (Hypothetical protein PINS_005016 [Pythium insidiosum]) HSP 1 Score: 543.1 bits (1398), Expect = 1.400e-150 Identity = 291/511 (56.95%), Postives = 364/511 (71.23%), Query Frame = 0 Query: 64 EMETLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDARG------------------------------DRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDEEGG-XXXXXXVRAKKNKSRALERLKEKIK 544 E+E + +R+ E PA GSQ DA +F PLS+ + +GL + FT+ T IQ+GA+PHALAGRD+LGAAKTGSGKTLAF++PLLEKLYR W + DGLGAL+I+PTRELALQIFEVLRSVGK H FSA L+ GG K F+EEQ R+ RMNI+V TPGR+LQH+E+TP FDA DRQT+LFSATQTKSV DLA+LSL E P+Y+ VH+KS ATP L Q+ V+ PL++KLD+L+SFLKSH+KHK++VFLS+C QVR+V+ F +QPG+PL AL GK KQ +R +IY++F+ +PAAVLFATDIAARGLDFP DWVVQ+D PED A YIHRVGRTARY G++LL L PSE EGM K L+ A +P+K + +NP+KT S +QK + VA++ + K LA KAF SY+RSV LMP KD+F +L LEAFA S GLP P FL+ LK ++ +R KKN +R L +LKEKIK Sbjct: 247 EIEAMEQRIRETTPARGSQ-LADA----DSFDVFPLSEASKRGLAKCGFTKPTRIQIGAIPHALAGRDILGAAKTGSGKTLAFLLPLLEKLYRLRWDVEDGLGALVISPTRELALQIFEVLRSVGKFHSFSAGLVIGG-KNFKEEQYRLVRMNILVCTPGRMLQHMEQTPDFDATNVQLLVLDEADRILDMGFQQQLSAIVSYLPTDRQTMLFSATQTKSVKDLAKLSLKE-PEYIAVHEKSAMATPAGLQQSLVVCPLDQKLDVLFSFLKSHLKHKIIVFLSTCRQVRFVHAAFCKLQPGIPLCALXGKYKQPKRVEIYYEFLNKPAAVLFATDIAARGLDFPQVDWVVQLDCPEDTANYIHRVGRTARYNKQGKALLCLLPSEAEGMKKHLEDAKIPIKEIKLNPAKTQSCRQKVTSSVAADKDLKALAQKAFMSYVRSVFLMPLKDVFRAGELPLEAFAQSYGLPGAPRMPFLEQLKQQDADHEQLREELRGKKNVNRKLAQLKEKIK 750
BLAST of NO20G01010 vs. NCBI_GenBank
Match: XP_024571469.1 (atp-dependent rna helicase [Plasmopara halstedii] >CEG35100.1 atp-dependent rna helicase [Plasmopara halstedii]) HSP 1 Score: 536.2 bits (1380), Expect = 1.700e-148 Identity = 288/536 (53.73%), Postives = 375/536 (69.96%), Query Frame = 0 Query: 50 SAAAEEKRQGMRVK-EMETLRKRVVEEAPAPGSQPFIDAGRKRKTFQSLPLSKVTLKGLGQNSFTEMTDIQLGAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWSLSDGLGALIITPTRELALQIFEVLRSVGKGHMFSAALLTGGKKEFREEQRRVPRMNIIVATPGRLLQHLEETPGFDA--------------------------------RGDRQTLLFSATQTKSVHDLARLSLGEAPQYVGVHDKSEHATPDQLVQNYVISPLEEKLDMLWSFLKSHMKHKVVVFLSSCSQVRYVYECFRCMQPGVPLLALHGKIKQARRTQIYFDFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDAAMYIHRVGRTARYQSGGRSLLFLCPSEEEGMLKRLKLAHVPVKRLTINPSKTTSVKQKTAAVVASNMECKRLAGKAFSSYLRSVALMPHKDMFNVSKLDLEAFADSLGLPKCPSTKFLKILKDE---EGGXXXXXXVRAKKNKSRALERLKEKIKMERAVK 550 + +++ +Q R + E+E L R+ E+ PA GSQ + +F LS+ + +GL F+ T IQ+GA+PHALAGRDVL AAKTGSGKTLAF++P+LEKL+R WS+ DGLGALII+PTRELALQIFEVLR+VGK H FSA L+ GG K FREEQ R+ RMN++V TPGRLLQH+E+TP FD+ G+RQT+LFSATQTKSV DLA LSL + P+YV VH+ S +ATP L Q+YV++PLE KLD+L SF+KSH+K K +VFLS+C QVR+++ F +QPG+PL ALHGK KQ +R ++Y++F+ +PAAVLFATDIAARGLDFP DWV+Q+D PEDAA YIHRVGRTARY G++L+ L PSE +G+ KRL+ A VP++ +NP+K+TS QK A+VVA + E K LA KAF SY+RSV L P +++F+ + L L+A+A+SLGLP P FL +KDE G +R KKN +R L++LKEKIK E+ K Sbjct: 22 NVVSDKLKQNERERLEIERLESRIAEQTPARGSQL-----GEAASFDLFALSEASRRGLRSCGFSAPTKIQIGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALIISPTRELALQIFEVLRNVGKAHTFSAGLVIGG-KNFREEQLRLIRMNLLVCTPGRLLQHMEQTPAFDSSNLQVLVLDEADRILDLGFQKQLTAILEHLPPAGERQTMLFSATQTKSVKDLAALSLRQ-PEYVAVHEHSANATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFIHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGITKRLEDAKVPIRETKLNPAKSTSCHQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALALDAYAESLGLPGAPRMPFLSKMKDEHEKRGNEALREELRGKKNVNRKLQQLKEKIKAEKERK 550 The following BLAST results are available for this feature:
BLAST of NO20G01010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01010 ID=NO20G01010|Name=NO20G01010|organism=Nannochloropsis oceanica|type=gene|length=2586bpback to top protein sequence of NO20G01010.1 >NO20G01010.1-protein ID=NO20G01010.1-protein|Name=NO20G01010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=800bpback to top Synonyms
Publications
|