NO20G00930, NO20G00930 (gene) Nannochloropsis oceanica

Overview
NameNO20G00930
Unique NameNO20G00930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1461
Alignment locationchr20:301861..303321 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:301861..303321 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO20G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00930.1NO20G00930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00930.1NO20G00930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00930 ID=NO20G00930|Name=NO20G00930|organism=Nannochloropsis oceanica|type=gene|length=1461bp
ATGGAAGTGATGCAGGGGGAGACGGGCGAAGGCTGCTATAAgtgcgcatt
caccaagctacctcggcaaagtaggcttgtctcactgtggatgtggtgag
agtgtggtcgaagtggtgatggagtattgtggggtgagtcgctttccggt
taccttggcaggtgtcgatgacgaagctgcaacaacgccttaacaagttc
cttttcgagccccacaagcacacccacgtacaggcaaatttagcatagga
ttttcttctcctatacttcgccaagGCTTGGCGCGGAGCGGGAAGCAGAG
GCCAgtgagtacaattggctttgtagaaaatatataaccgcgtgcatcgt
aaaacacgcatgggccggctgcgcacctgccattatcctctttatggcga
tgcctagcgcagcacagagccagaaatctctccgtaaactggactgttca
caaaggcgaagatgtgcttgccatccatcttcaccagtcattgatctgct
tccacttcccttccactctacctacctacctacctacctcccttcctcct
cctcctcctccctcatccccccttccacagCCACCATGAAAGGCTTTGAA
GACATCGATTGGGGAATATTTGACAATTCACCACCCAATCTTACACTTTC
CTCTGCTGCTGATGTTGCTGCACCATTGCCCTTTCCCTCCCACCCTTCCT
CTTCGTCCTTCTCCTCCTCCCCAGCCAAGGGCAGCCTGGCGCTCTCGCGC
TCGCCGCCTCATCACCACCTGCGGTTGACGCACAGGCAGCTTTCGAGCTC
TCCTGCTCCTCCTTGTTTCAAAACTGTTCTTGGTGTCAAGGAAAGGCTTC
ATTCTACTTTTCTTATCGCCACCACAACTGCTGCTACCGCGGAGATGGCG
GCAGCACCCACTTCTTGGGAGAAGGCGAAGACGAAAGACAAGAATAAGGA
AAATGACGACGAAAGGGAGGAGGAGGAGGAGGAGGAGAAAGAGCAGAAGG
TAGAGAAGGAGGTAGCAGAGGAGATTAAAGAGGAAAAAATATGCCAAGGC
AAGCAAGCAGCTACTACTTCTACCAGTTACCTTCCTCCAACCCCCACTAC
CGCCACCCGTCCCAGGAAGGGAAATGGCACAGGCCCAATCATTCAGACAA
GCATGCCGCTCCTCTTTCCTTCCGCGGTGCAGCGGCAAAAAGATGGCTTG
GGTTTACTCGTGAGCATGAGTGACAAGGCGTTTGAATGTGAGGGTGATAC
AGGAGCACTGGGTCGATGCACTCTCATCCAGAGGGGGAGGGAGGGAGGAC
AGTGGAAAGGGAGGGAGGGAGGGCAGCAGCACTTAGAGACGCTTTTACTG
CTTGATCTTAAGGGTGTAGAGTATGTGGGAAGAGTGGGAAGGCTCGGAGG
GACGGCCTGGTTGGTCGATGTTGCTTCAAAAGCGAGAGCAAAGAAGGGAG
GGGGGGAATGA
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protein sequence of NO20G00930.1

>NO20G00930.1-protein ID=NO20G00930.1-protein|Name=NO20G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MEVMQGETGEGCYKLGAEREAEATTMKGFEDIDWGIFDNSPPNLTLSSAA
DVAAPLPFPSHPSSSSFSSSPAKGSLALSRSPPHHHLRLTHRQLSSSPAP
PCFKTVLGVKERLHSTFLIATTTAATAEMAAAPTSWEKAKTKDKNKENDD
EREEEEEEEKEQKVEKEVAEEIKEEKICQGKQAATTSTSYLPPTPTTATR
PRKGNGTGPIIQTSMPLLFPSAVQRQKDGLGLLVSMSDKAFECEGDTGAL
GRCTLIQRGREGGQWKGREGGQQHLETLLLLDLKGVEYVGRVGRLGGTAW
LVDVASKARAKKGGGE*
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Synonyms
Publications