NO20G00860, NO20G00860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00860 vs. NCBI_GenBank
Match: EWM22145.1 (er lumen protein retaining receptor [Nannochloropsis gaditana]) HSP 1 Score: 412.5 bits (1059), Expect = 8.300e-112 Identity = 206/226 (91.15%), Postives = 215/226 (95.13%), Query Frame = 0 Query: 1 MSMNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSFRLEFALAPCFVLALITNLIRGFGIVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPTSAGGFK 227 MSMNIFR AGDMSHVFSIIILLLRL VAKNANGVSLKTQELFLIVFCTRYLDL IR+ISLYNS MKILYIGSTAAI+HMIRYREPYRSTYD++QDSFRLEFAL PC VLA+IT+LIRGFG +EL WTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHD VVYACGFVQTALYADFFYYY QSKY+GGTFSLPTS+ GFK Sbjct: 1 MSMNIFRFAGDMSHVFSIIILLLRLHVAKNANGVSLKTQELFLIVFCTRYLDLLIRFISLYNSAMKILYIGSTAAIIHMIRYREPYRSTYDRSQDSFRLEFALIPCLVLAMITSLIRGFGFIELFWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDYVVYACGFVQTALYADFFYYYFQSKYYGGTFSLPTSSAGFK 226
BLAST of NO20G00860 vs. NCBI_GenBank
Match: XP_002181703.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46917.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 315.1 bits (806), Expect = 1.800e-82 Identity = 161/225 (71.56%), Postives = 193/225 (85.78%), Query Frame = 0 Query: 1 MSMNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSF-RLEFALAPCFVLALITNLI--RGFGIVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPTSA 223 MSMNIFRLAGDM HVFSII+LLLRL+VAKNA G+SL+T ELFL+VF TRYLDLF + S+YNSVMK+LYI STA+IV+ IR++EP +STY+K+QD+F +FA+APCF +ALIT+LI + F +VELLWTFSIYLE++AILPQLIVLQRY VENLTG+YIFF+GAYR LYI+NWIYRA+TEK Y H VVY CG VQT LYADFFYYY++SK GG F+LPT + Sbjct: 1 MSMNIFRLAGDMCHVFSIIVLLLRLRVAKNAQGISLRTNELFLLVFVTRYLDLFFNFFSIYNSVMKVLYIVSTASIVYTIRFKEPIKSTYEKSQDTFLHWKFAVAPCFAIALITHLIGSKRFDMVELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRALYIVNWIYRAHTEKGYKHHWVVYFCGVVQTLLYADFFYYYLKSKSKGGKFTLPTKS 225
BLAST of NO20G00860 vs. NCBI_GenBank
Match: OEU20987.1 (KDEL receptor A [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 296.6 bits (758), Expect = 6.600e-77 Identity = 151/225 (67.11%), Postives = 182/225 (80.89%), Query Frame = 0 Query: 3 MNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSF-RLEFALAPCFVLALITNL----IRGFGIVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPTSA 223 MNIFR GDMSH+FSII+LLLRL+VAKNA G+S+KT EL+L+VF TRYLDLF + S YNSVMK++YI +TA+IV+ I+++EP +STY+K QDSF +FA PC VLA IT+L I F +ELLWTFSIYLE + I+PQL+VLQRY VENLTG+Y+FF+GAYR LYILNWIYRA TEK+Y H VVY CG +QT LYADFFYYY++SK GG FSLPTSA Sbjct: 1 MNIFRFCGDMSHLFSIIVLLLRLRVAKNAQGISVKTHELYLLVFLTRYLDLFTTFYSAYNSVMKLVYIAATASIVYTIKFQEPIKSTYEKGQDSFLHWQFAAIPCAVLAFITHLIGSGIADFNFMELLWTFSIYLECLTIMPQLVVLQRYREVENLTGNYVFFMGAYRALYILNWIYRANTEKNYRHHWVVYICGTIQTLLYADFFYYYLKSKAKGGKFSLPTSA 225
BLAST of NO20G00860 vs. NCBI_GenBank
Match: XP_009042152.1 (hypothetical protein AURANDRAFT_55650 [Aureococcus anophagefferens] >EGB03147.1 hypothetical protein AURANDRAFT_55650 [Aureococcus anophagefferens]) HSP 1 Score: 291.6 bits (745), Expect = 2.100e-75 Identity = 147/220 (66.82%), Postives = 183/220 (83.18%), Query Frame = 0 Query: 3 MNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSF-RLEFALAPCFVLALITNLI-RGFGIVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPT 221 MN+FR AGDMSHV SII+L+LRL+V+K+A G+S+KTQELFLIVF TRYLDLF + S+YNS MK+ YI +TA+I++MIR++EPY+S YDK+QDSF ++FA+APC VLAL + LI R ++LLWTFSI+LEA+AI+PQL VLQRY VENLTGHY+FFLGAYR LYILNW+YR+Y E Y H+ +VY G +QTALY DFFYYYM SKY+GG +LPT Sbjct: 1 MNLFRFAGDMSHVVSIIVLILRLRVSKSAVGISIKTQELFLIVFVTRYLDLFTTFYSMYNSFMKVAYITATASIIYMIRFKEPYKSKYDKSQDSFLHVKFAVAPCAVLALFSCLIKRELNPIDLLWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRFLYILNWVYRSYYEPFYRHNWLVYVSGAIQTALYVDFFYYYMVSKYYGGKLTLPT 220
BLAST of NO20G00860 vs. NCBI_GenBank
Match: GAX26510.1 (ER lumen protein retaining receptor [Fistulifera solaris]) HSP 1 Score: 290.4 bits (742), Expect = 4.700e-75 Identity = 153/225 (68.00%), Postives = 180/225 (80.00%), Query Frame = 0 Query: 1 MSMNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSFRL-EFALAPCFVLALITNL----IRGFGIVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPT 221 MSMNIFRLAGDMSHVFSI++LLLRL+VAKNA G+S++T ELFLIVF TRYLDLF + SLYNS+MKILYI STA+I++ I+++EP +STYDK+QDSF +FA+APC VLA +T+L I GF +ELLWTFSIYLE++AILPQLIVLQRY VENLTG+YIFF+GAYR LYILNWIYRA E HY H VVY CG +QT LY DF GG F+LPT Sbjct: 1 MSMNIFRLAGDMSHVFSILVLLLRLRVAKNAQGISVRTHELFLIVFLTRYLDLFTTFYSLYNSIMKILYIVSTASIIYTIKFQEPIKSTYDKSQDSFLYWQFAVAPCAVLASVTHLIGSGISGFSFIELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRFLYILNWIYRANFEAHYQHHWVVYICGVLQTLLYVDFXXXXXXXXXSGGRFTLPT 225
BLAST of NO20G00860 vs. NCBI_GenBank
Match: GAX27498.1 (ER lumen protein retaining receptor [Fistulifera solaris]) HSP 1 Score: 290.0 bits (741), Expect = 6.200e-75 Identity = 153/225 (68.00%), Postives = 179/225 (79.56%), Query Frame = 0 Query: 1 MSMNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSFRL-EFALAPCFVLALITNL----IRGFGIVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPT 221 MSMNIFRLAGDMSHVFSI++LLLRL+VAKNA G+S++T ELFLIVF TRYLDLF + SLYNS+MKILYI STA+I++ I+++EP +STYDK+QDSF +FA+APC VLA T+L I GF +ELLWTFSIYLE++AILPQLIVLQRY VENLTG+YIFF+GAYR LYILNWIYRA E HY H VVY CG +QT LY DF GG F+LPT Sbjct: 1 MSMNIFRLAGDMSHVFSILVLLLRLRVAKNAQGISVRTHELFLIVFLTRYLDLFTTFYSLYNSIMKILYIASTASIIYTIKFQEPIKSTYDKSQDSFLYWQFAVAPCAVLASATHLIGSGISGFSFIELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRFLYILNWIYRANFEAHYQHHWVVYICGVLQTLLYVDFXXXXXXXXXSGGRFTLPT 225
BLAST of NO20G00860 vs. NCBI_GenBank
Match: XP_009040119.1 (hypothetical protein AURANDRAFT_54782 [Aureococcus anophagefferens] >EGB05218.1 hypothetical protein AURANDRAFT_54782 [Aureococcus anophagefferens]) HSP 1 Score: 288.1 bits (736), Expect = 2.400e-74 Identity = 146/220 (66.36%), Postives = 182/220 (82.73%), Query Frame = 0 Query: 3 MNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSF-RLEFALAPCFVLALITNLI-RGFGIVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPT 221 MN+FR AGDMSHV SII+L+LRL+V+K+A G+SLKTQELFLIVF TRYLDLF + S+YNS MK+ YI +TA+I++MIR++EPY+S YDK+QDSF +FA+APC +LAL + LI R V++LWTFSI+LEA+AI+PQL VLQRY VENLTGHY+FFLGAYR LYILNW+YR+Y E Y H+ +VY G +QTALY DFFYYY+ SKY+GG +LPT Sbjct: 1 MNLFRFAGDMSHVVSIIVLILRLRVSKSAVGISLKTQELFLIVFMTRYLDLFTTFYSMYNSFMKVAYITATASIIYMIRFKEPYKSKYDKSQDSFLHFKFAVAPCAMLALFSCLIKRELNPVDVLWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRFLYILNWVYRSYYEPFYRHNWLVYISGAIQTALYVDFFYYYIVSKYYGGKLTLPT 220
BLAST of NO20G00860 vs. NCBI_GenBank
Match: XP_002290173.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91925.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 283.5 bits (724), Expect = 5.800e-73 Identity = 153/225 (68.00%), Postives = 174/225 (77.33%), Query Frame = 0 Query: 3 MNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSFR-LEFALAPCFVLALITNLIRGFG------IVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPT 221 MNIFRL GDMSHVFSII+LLLRL+VA+NA G+SL+T ELFL+VF TRY DLF Y SLYNSVMK+LYI STA+IV+ IR +EP STYDK QD+FR EFA+APC VLA +T+LI G G + ELLWTFSIYLEAVAILPQLIVLQRY VENLTG+YIFF+G YR LYI+NW++RAY E Y H VVY CG +QT LYADF GG FSLPT Sbjct: 1 MNIFRLCGDMSHVFSIIVLLLRLRVARNAQGISLRTHELFLLVFLTRYTDLFTTYYSLYNSVMKVLYIASTASIVYTIRLQEPICSTYDKAQDTFRHWEFAVAPCAVLATLTHLISGGGLFSVVDVQELLWTFSIYLEAVAILPQLIVLQRYRDVENLTGNYIFFMGLYRALYIVNWVFRAYNEPGYRHHYVVYFCGVLQTLLYADFXXXXXXXXXRGGKFSLPT 225
BLAST of NO20G00860 vs. NCBI_GenBank
Match: EJK46859.1 (hypothetical protein THAOC_34459 [Thalassiosira oceanica]) HSP 1 Score: 281.2 bits (718), Expect = 2.900e-72 Identity = 151/231 (65.37%), Postives = 175/231 (75.76%), Query Frame = 0 Query: 1 MSMNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSFR-LEFALAPCFVLALITNLIRGFG--------IVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPTSA 223 MSMN+FRL GDMSHVFSI++LLLRL+VAKNA+G+SL+T ELFL+VF TRY DLF Y SLYNS MKI YI STA+IV+MIR +P +TYDK QD+FR FA+ PC VLA +T+ I G G I ELLWTFSIYLE++AILPQLI+LQRY VENLTG+YIFF+G+YR LYILNWIYR Y E Y H V Y CG +QT LYADFF SK GG FSLPT + Sbjct: 1 MSMNVFRLCGDMSHVFSIVVLLLRLRVAKNASGISLRTHELFLLVFLTRYTDLFTTYYSLYNSCMKIAYILSTASIVYMIRLSDPICTTYDKAQDTFRHWAFAVGPCAVLATLTHFISGEGSGYSLFVNIQELLWTFSIYLESIAILPQLILLQRYREVENLTGNYIFFMGSYRALYILNWIYRTYYEPGYRHHYVAYFCGVLQTLLYADFFXXXXXSKRRGGRFSLPTKS 231
BLAST of NO20G00860 vs. NCBI_GenBank
Match: GAX99345.1 (ER lumen protein retaining receptor [Pythium insidiosum]) HSP 1 Score: 269.2 bits (687), Expect = 1.100e-68 Identity = 135/219 (61.64%), Postives = 174/219 (79.45%), Query Frame = 0 Query: 3 MNIFRLAGDMSHVFSIIILLLRLQVAKNANGVSLKTQELFLIVFCTRYLDLFIRYISLYNSVMKILYIGSTAAIVHMIRYREPYRSTYDKNQDSF-RLEFALAPCFVLALITNLIRGFGIVELLWTFSIYLEAVAILPQLIVLQRYSVVENLTGHYIFFLGAYRGLYILNWIYRAYTEKHYHHDLVVYACGFVQTALYADFFYYYMQSKYHGGTFSLPT 221 MN+FRL GDMSH+ S ++LLL+L +++A G+SLK+QELF +VF TRYLDLF ++S YN+VMKIL++ + AIV++IRYREP+RSTYDK+ D+F ++FA+ PC +LALI N F ++E+LWTFSIYLEAVAI+PQLI+LQR+ VENLT +Y+ LGAYRG YILNWIYRA TEK YH +++ G VQTALY DFFYYY SKYHG +LP+ Sbjct: 1 MNLFRLVGDMSHLASFLVLLLKLLASRSAAGISLKSQELFFLVFVTRYLDLFTHFVSFYNTVMKILFLAFSGAIVYVIRYREPFRSTYDKSHDTFLHVKFAVLPCALLALIFN--ESFEVMEILWTFSIYLEAVAIIPQLILLQRHGEVENLTSNYVVLLGAYRGCYILNWIYRAATEKSYHFIWLMFIAGMVQTALYVDFFYYYAISKYHGKKMTLPS 217 The following BLAST results are available for this feature:
BLAST of NO20G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00860 ID=NO20G00860|Name=NO20G00860|organism=Nannochloropsis oceanica|type=gene|length=4781bpback to top protein sequence of NO20G00860.1 >NO20G00860.1-protein ID=NO20G00860.1-protein|Name=NO20G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=227bpback to top Synonyms
Publications
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