NO20G00820, NO20G00820 (gene) Nannochloropsis oceanica

Overview
NameNO20G00820
Unique NameNO20G00820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2162
Alignment locationchr20:275017..277178 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein tssc1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:275017..277178 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
Homology
BLAST of NO20G00820 vs. NCBI_GenBank
Match: EWM22147.1 (protein tssc1 [Nannochloropsis gaditana])

HSP 1 Score: 280.0 bits (715), Expect = 1.100e-71
Identity = 162/314 (51.59%), Postives = 186/314 (59.24%), Query Frame = 0
Query:   84 MYSGAVVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAALCFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDPHNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHGARDVDFNRSKPYYFVTGG 398
            MYSGAVVYGAKNQSRCLAAV GDHE  HRF VGAAGLR+ P NELLLLEY E+TN ++EA  Y HPGEIWHISPSPRD++LCFTSSTR+G DP CTLWRL LP      PSS   + GD    +S+   SP  QAF TS  F                                             RVRCVLW  G E     +VLAVD  KA LY+L  SS      AQE+S+F LG  EKGEVQ AAWDPH+ +KVA  QG  + H D+R  + +G   +   Q +   HR G +DVDFN +KPY FVTGG
Sbjct:    6 MYSGAVVYGAKNQSRCLAAVKGDHEH-HRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDM--PRSTTRHSPTQQAFTTS--FLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLW--GPEQETNGKVLAVDGEKARLYALQGSS-----DAQEMSNFDLGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETE--QSSGFCHRFGVKDVDFNHAKPYCFVTGG 305          
BLAST of NO20G00820 vs. NCBI_GenBank
Match: EWM22141.1 (hypothetical protein Naga_100064g6 [Nannochloropsis gaditana])

HSP 1 Score: 100.1 bits (248), Expect = 1.600e-17
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0
Query:   34 GGLEGTVTTTWVKCEVDPHCCCAELGTEGPIRVDFVASNGKNAGRLG 81
            GGLEG VTTTWVKCEVDPHCCCAELGTEGPIRVDFVA  G+NAGRLG
Sbjct:  114 GGLEGVVTTTWVKCEVDPHCCCAELGTEGPIRVDFVADQGRNAGRLG 160          
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_007257367.2 (protein TSSC1 [Astyanax mexicanus])

HSP 1 Score: 89.4 bits (220), Expect = 2.800e-14
Identity = 79/315 (25.08%), Postives = 125/315 (39.68%), Query Frame = 0
Query:   89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398
            V+YG + Q+R L A   +  +  RFLVG   L+    N++ ++++ ++ N + +     H GEIWHIS SP D  +   C+  ++         +WR+PL                     +S  H SPD  + +  T                                                  CVLW   E  G  ++V+++ +    L+ L  SST +  S    SS  L G  + +  +  W P HN  ++AT   T++  WDLR          S+ QI  + + HG   RD+DFN +K YY  + G
Sbjct:    7 VIYGLEFQARALTAQTAE-TDAIRFLVGTQSLKFD--NQIHIIDFDDENNIINKNVLLHHAGEIWHISASPADKGVLTTCYNKTSESRVLTCAAVWRMPL-------------------EWESGSHESPDDSSNSPQTL----------------------------------ELLCHLDNTAHGNTACVLW---EPMGDGKRVISLADSHVVLWDLQESSTKATIS----SSATLEGKGQLKFTSGKWSPHHNCTQLATANDTAIRGWDLR----------SMSQIFCIENAHGQLVRDLDFNPNKQYYLASCG 248          
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_017287201.1 (PREDICTED: protein TSSC1 [Kryptolebias marmoratus])

HSP 1 Score: 87.4 bits (215), Expect = 1.100e-13
Identity = 79/315 (25.08%), Postives = 126/315 (40.00%), Query Frame = 0
Query:   89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398
            V+YG + Q+R L A  G+  +  RFLVG   L+    N++ ++++ ++ N + +       GEIWHI+ SP D A+   C+  ++         +WR+P                   S  +S  H SPD  A    T                                                  CVLW   E  G  ++V+++ +  A L+ L  SST +  S    S+  L G  + +  +  W P HN  ++AT   T++  WDLRT          + QI  + + HG   RD+DFN ++ YY  + G
Sbjct:    7 VIYGLEFQARALTAQTGE-TDAIRFLVGTQSLKFD--NQIHIIDFDDENNIINKNVLLHQAGEIWHIAASPADKAVLSTCYNKTSDSRVVSCAAVWRMP-------------------SDWESGSHESPDDSAHNPQTL----------------------------------ELLCHLDDSSHGNAACVLW---EPMGDGKRVISLADNHALLWDLQESSTQATVS----STATLEGKGQLKFTSGKWSPHHNCSQLATANDTAIRGWDLRT----------MSQIYCIENAHGQLVRDLDFNPNRQYYLASCG 248          
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_013885079.1 (PREDICTED: protein TSSC1 [Austrofundulus limnaeus])

HSP 1 Score: 86.3 bits (212), Expect = 2.400e-13
Identity = 79/315 (25.08%), Postives = 125/315 (39.68%), Query Frame = 0
Query:   89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398
            V+YG + Q+R L A  G+  +  RFLVG   L+    N++ ++++ ++ N + +       GEIWHI+ SP D A+   C+  ++         +WR+P                   S  +S  H SPD  A    T                                                  CVLW   E  G  ++V+++ +  A L+ L  SST +  S    S+  L G  + +  +  W P HN  ++AT   T++  WDLRT          + QI  +   HG   RD+DFN ++ YY  + G
Sbjct:    7 VIYGLEFQARALTAQTGE-TDAIRFLVGTQSLKFD--NQIHIIDFDDENNIINKNVLLHQAGEIWHIAASPADKAVLSTCYNKTSDSRVVSCAAVWRMP-------------------SDWESGSHESPDDSAHNPQTL----------------------------------ELLCHLDDSSRGNAACVLW---EPMGDGKRVISLADNHALLWDLQESSTRATVS----STATLEGKGQLKFTSGKWSPHHNCSQLATANDTAIRGWDLRT----------MSQIYCIESTHGQLVRDLDFNPNRQYYLASCG 248          
BLAST of NO20G00820 vs. NCBI_GenBank
Match: ACO13977.1 (TSSC1 [Esox lucius])

HSP 1 Score: 85.9 bits (211), Expect = 3.100e-13
Identity = 80/317 (25.24%), Postives = 128/317 (40.38%), Query Frame = 0
Query:   87 GAVVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398
            G V+YG + Q+R L +   +  +  RFLVG   L+    N++ ++++ ++ N + ++      GEIWHIS SP D A+   C+  ++      +  +WR+P            P  E     S    H S + Q+                                                       CVLW   E  G  ++V+++ +  A L+ L+ SST +  S    SS  L G  + +  +  W P HN  ++AT   T++  WDLRT K          QI  + + HG   RD+DFN +K YY  + G
Sbjct:    5 GPVIYGLEFQARALTSQTAE-SDAIRFLVGTQSLKFD--NQIHIIDFDDENNIISKSVLQHEAGEIWHISASPADKAVLTTCYNITSESRVVTSGAVWRMP------------PEWESGSHESPDDPHNSHNPQSL---------------------------------------DLLCHLDNSAHGNASCVLW---EPMGDGKRVISLADNHALLWDLTESSTQATIS----SSATLEGKGQLKFTSGKWSPHHNCTQLATANDTAIRGWDLRTMK----------QIYCIENAHGQLVRDLDFNPNKQYYLASCG 250          
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_010877439.1 (PREDICTED: protein TSSC1 [Esox lucius])

HSP 1 Score: 85.9 bits (211), Expect = 3.100e-13
Identity = 80/317 (25.24%), Postives = 128/317 (40.38%), Query Frame = 0
Query:   87 GAVVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398
            G V+YG + Q+R L +   +  +  RFLVG   L+    N++ ++++ ++ N + ++      GEIWHIS SP D A+   C+  ++      +  +WR+P            P  E     S    H S + Q+                                                       CVLW   E  G  ++V+++ +  A L+ L+ SST +  S    SS  L G  + +  +  W P HN  ++AT   T++  WDLRT K          QI  + + HG   RD+DFN +K YY  + G
Sbjct:    5 GPVIYGLEFQARALTSQTAE-SDAIRFLVGTQSLKFD--NQIHIIDFDDENNIISKSVLQHEAGEIWHISASPADKAVLTTCYNITSESRVVTSGAVWRMP------------PEWESGSHESPDDPHNSHNPQSL---------------------------------------DLLCHLDNSAHGNASCVLW---EPMGDGKRVISLADNHALLWDLTESSTQATIS----SSATLEGKGQLKFTSGKWSPHHNCTQLATANDTAIRGWDLRTMK----------QIYCIENAHGQLVRDLDFNPNKQYYLASCG 250          
BLAST of NO20G00820 vs. NCBI_GenBank
Match: EPB83926.1 (hypothetical protein HMPREF1544_09316 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 85.5 bits (210), Expect = 4.100e-13
Identity = 83/319 (26.02%), Postives = 124/319 (38.87%), Query Frame = 0
Query:   84 MYSGAVVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAALCFTSSTRKGTDP---ACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSL--STSSTSSDNSAQEISSFILGGPEKGEVQTAAWDPHNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHGARDVDFNRSKPYYFVTGG 398
            M   + V+G ++Q+RCL  V    E+  +FL G  G ++   N + LLEY +D + +     Y HP E+W I   P D  L FT  +    +P     TLWR P          +   +EG          R   H+  +  T                                                +R VLW   E+    +Q++A+D  +  L S+      TS         S     P   ++Q A W+PH   ++ TV   +V+ WDLR+GK S   ++        AH+   R VD+N +KPY  VTGG
Sbjct:    1 MAENSSVFGLRHQARCLTPVTSSTEQS-KFLAGTVGAKD---NVVCLLEY-DDDDTIITPTMYNHPEEVWDIVSCPTDEHLLFTCHSPVSGNPLNRKATLWRKP----------AITKDEGG---------RDQRHELTSLVTL-------------------------------------------EQEGIRKVLWDPKEQ---NQQIIAIDSNQLYLTSIHDDACQTSLTMDVSPTFSTDSNSPSLRQLQNAVWNPHQ-PEIITVGDRTVSGWDLRSGKSSFSRAN--------AHKSTIRAVDYNPNKPYCVVTGG 240          
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_018950649.1 (PREDICTED: protein TSSC1-like [Cyprinus carpio])

HSP 1 Score: 85.5 bits (210), Expect = 4.100e-13
Identity = 79/315 (25.08%), Postives = 126/315 (40.00%), Query Frame = 0
Query:   89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398
            V+YG + Q+R L A   +  +  RFLVG   L+    N++ ++++ ++ N + ++      GEIWHIS SP D A+   C++ ++         +WR+P                      +S  H SPD  +    T                                                V CVLW   E  G  ++++++ E    L+ L  SST +  S    S+  L G  + +  T  W P HN  ++AT   T++  WDLR          S+ QI  + + HG   RD+DFN +K YY  + G
Sbjct:    9 VIYGLEFQARALTAQTAE-TDAIRFLVGTQSLKFD--NQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVLTTCYSKTSESRVLTCAAVWRMP-------------------PEWESGNHESPDDSSNNPQTL----------------------------------ELLCHLDNTAHGSVACVLW---EPMGDGKRLISLAENHVLLWDLQESSTKAKIS----STATLEGKGQLKFTTGKWSPHHNSTQLATANDTAIRGWDLR----------SMSQIYCIENAHGQLVRDLDFNPNKQYYLASCG 250          
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_016335934.1 (PREDICTED: protein TSSC1 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 85.1 bits (209), Expect = 5.400e-13
Identity = 79/313 (25.24%), Postives = 122/313 (38.98%), Query Frame = 0
Query:   89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHGARDVDFNRSKPYYFVTGG 398
            V+YG + Q+R L A   +  +  RF+VG   L+    N++ ++++ ++ N + ++      GEIWHIS SP D A+   C++ ++         +WR+P                      +S  H SPD  +    T                                                V CVLW   E  G  ++V+++ E    L+ L  SST +  S    SS  L G  + +     W P HN  ++AT   T++  WDLR        S S     E AH    RD+DFN +K YY  + G
Sbjct:    7 VIYGLEFQARALTAQTAE-TDAIRFVVGTQSLKFD--NQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVLTTCYSKTSESRVLTCAAVWRMP-------------------PEWESGSHESPDDSSNNPQTL----------------------------------ELLCHLDNTTHGSVACVLW---EPMGDGKRVISLAENHVLLWDLQESSTKATIS----SSATLEGKGQLKFTAGKWSPHHNSTQLATANDTAIRGWDLR--------SMSQIYCIESAHGQLVRDLDFNPNKQYYLASCG 248          
The following BLAST results are available for this feature:
BLAST of NO20G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22147.11.100e-7151.59protein tssc1 [Nannochloropsis gaditana][more]
EWM22141.11.600e-1791.49hypothetical protein Naga_100064g6 [Nannochloropsi... [more]
XP_007257367.22.800e-1425.08protein TSSC1 [Astyanax mexicanus][more]
XP_017287201.11.100e-1325.08PREDICTED: protein TSSC1 [Kryptolebias marmoratus][more]
XP_013885079.12.400e-1325.08PREDICTED: protein TSSC1 [Austrofundulus limnaeus][more]
ACO13977.13.100e-1325.24TSSC1 [Esox lucius][more]
XP_010877439.13.100e-1325.24PREDICTED: protein TSSC1 [Esox lucius][more]
EPB83926.14.100e-1326.02hypothetical protein HMPREF1544_09316 [Mucor circi... [more]
XP_018950649.14.100e-1325.08PREDICTED: protein TSSC1-like [Cyprinus carpio][more]
XP_016335934.15.400e-1325.24PREDICTED: protein TSSC1 [Sinocyclocheilus anshuie... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00820.1NO20G00820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594495gene_6295Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100064g6gene8294Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00820.1NO20G00820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00820 ID=NO20G00820|Name=NO20G00820|organism=Nannochloropsis oceanica|type=gene|length=2162bp
ATGCCTCCTTCTTCGCCGCATTTACCTgtacggcatcttcctttctccct
atctgccgatataacccaagacatgagcaaggacggcaagtccaccgtcg
tcgttcgtcgtcgtctcttcagatgcgggacgctagCATGACCCGGGATT
TTTCCGTCGGGGACAAAGTGCGCGTCGAGCCAGGGGTAGAACTAGACGGC
ATGGACTGGGGGGGTTGGAGGGAACCGTGACGACGACCTGGGTCAAgtaa
gtcttgttgtggttgtactgtgtcatactcgccatctcctgtccgtcagg
gaccgacaattacttgcccctcagctccctataacattctcttcacctca
gtacatttacgtcgcacctttcacattcaaaaccccctctcctccccact
gccgttgcacctcacacgaatcattatcccttctcttcatcaatctttaa
tctttcctagATGTGAAGTGGACCCTCACTGCTGCTGTGCCGAGCTTGGG
ACCGAAGGCCCTATCCGAGTAGACTTTGTCGCCAGCAATGGGAAGAACGC
TGGAAGACTGGGGCCAGgtaaagacaagaattacaattttttcaatgagg
aagaactggtcaagctgataagcgcggatgttgagattaatggatgaagt
ggagatttagaggggttactgtgtgtagaagagtgtgtgttaaattttgc
gcgtgtggtgattgtagatgacatcaagttttaaaagaaaaaaggtgaat
tcgaatttctgatccgtttaaatgtgaagcctttcccgtatctcgttttg
agatgactaggagctagattagcgcaagaaagcgagagggaaagacggag
ctatgaaccactcctcatggtttgcagtgaaaagcgtgtctgatgacggg
gggaagggaaagagagactgcagcttacgcaagtgacaggctttccaaaa
ctgtatctgcgacaacacgaaatcgaaatactcactttgcttggaacgga
ttatatcatgactctctgtccattgccacgaaacatgaggcgaacgagcg
gtaaatttaaaagggggcaaggtaggaggaggtgatgttgaggcaccgcc
gcaacggtcttctgcaaaaaataactggagcagcatcccatcacaccaca
ccacactaagtcaaccacgcaccacatacccttaaattttgttcgcacag
TCGCCATGTACTCGGGTGCGGTCGTGTATGGGGCCAAAAACCAATCTCGG
TGTCTAGCGGCCGTGTGCGGGGATCACGAGGAGGGTCATCGCTTCCTTGT
CGGAGCTGCGGGCCTGCGTGAGCAACCCCACAATGAACTTTTGCTGCTCG
AGTACTTCGAAGACACCAACAATGTAAAAGAAGCATGCACTTACCGTCAT
CCAGGAGAGATCTGGCACATCAGTCCATCCCCACGCGATGCCGCCTTGTG
TTTCACCAGCTCGACGCGCAAGGGCACCGATCCCGCCTGCACCTTGTGGC
GTCTCCCGTTGCCTTCGTCCTCCGCGTTCTCCCCATCCAGCTCACCCACA
GAAGAAGGAGATCAATCAGCATCACAGTCATCCGTGCATCGCTCCCCAGA
TCACCAGGCCTTTGCGACATCGACGTTTTTTCCAGGTGGAGGAGGAGGGA
TAAGAGGAGATAGCGGCAAGACCCACAACAATCACCAGCAGCATAACCAG
AGCACTCCTATGGAAGCGATAATAAGCCTACCGACGATAACGACAACGAG
CAGCAGTGGAGGAGGACGGGTTCGGTGTGTGTTGTGGAGTTTAGGGGAGG
AGGCGGGGGCACAGGAGCAAGTGCTAGCTGTGGACGAAGGGAAAGCAACA
TTATATTCACTCAGTACCAGCAGCACCAGCAGTGATAACAGTGCGCAGGA
GATCAGTAGCTTTATCTTGGGTGGACCCGAGAAAGGGGAGGTCCAAACGG
CAGCATGGGACCCCCATAACCTGTATAAGGTCGCGACAGTACAAGGCACG
AGTGTCACACACTGGGACCTGCGCACAGGGAAACCGTCTGGCCAAGCCTC
GTCATCCCTCCCTCAGATCGCGGAGCTCGCCCACAGGCACGGTGCTCGTG
ACGTGGACTTTAATCGATCGAAGCCTTACTATTTTGTGACGGGGGGGAGG
ATCGTTTGGTGA
back to top

protein sequence of NO20G00820.1

>NO20G00820.1-protein ID=NO20G00820.1-protein|Name=NO20G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MPPSSPHLPHDPGFFRRGQSARRARGRTRRHGLGGLEGTVTTTWVKCEVD
PHCCCAELGTEGPIRVDFVASNGKNAGRLGPVAMYSGAVVYGAKNQSRCL
AAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPG
EIWHISPSPRDAALCFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEE
GDQSASQSSVHRSPDHQAFATSTFFPGGGGGIRGDSGKTHNNHQQHNQST
PMEAIISLPTITTTSSSGGGRVRCVLWSLGEEAGAQEQVLAVDEGKATLY
SLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDPHNLYKVATVQGTSV
THWDLRTGKPSGQASSSLPQIAELAHRHGARDVDFNRSKPYYFVTGGRIV
W*
back to top
Synonyms
Publications