NO20G00820, NO20G00820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00820 vs. NCBI_GenBank
Match: EWM22147.1 (protein tssc1 [Nannochloropsis gaditana]) HSP 1 Score: 280.0 bits (715), Expect = 1.100e-71 Identity = 162/314 (51.59%), Postives = 186/314 (59.24%), Query Frame = 0 Query: 84 MYSGAVVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAALCFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDPHNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHGARDVDFNRSKPYYFVTGG 398 MYSGAVVYGAKNQSRCLAAV GDHE HRF VGAAGLR+ P NELLLLEY E+TN ++EA Y HPGEIWHISPSPRD++LCFTSSTR+G DP CTLWRL LP PSS + GD +S+ SP QAF TS F RVRCVLW G E +VLAVD KA LY+L SS AQE+S+F LG EKGEVQ AAWDPH+ +KVA QG + H D+R + +G + Q + HR G +DVDFN +KPY FVTGG Sbjct: 6 MYSGAVVYGAKNQSRCLAAVKGDHEH-HRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFTSSTRRGADPLCTLWRLSLPEFPHSPPSSPSKDAGDM--PRSTTRHSPTQQAFTTS--FLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRCVLW--GPEQETNGKVLAVDGEKARLYALQGSS-----DAQEMSNFDLGVEEKGEVQAAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETE--QSSGFCHRFGVKDVDFNHAKPYCFVTGG 305
BLAST of NO20G00820 vs. NCBI_GenBank
Match: EWM22141.1 (hypothetical protein Naga_100064g6 [Nannochloropsis gaditana]) HSP 1 Score: 100.1 bits (248), Expect = 1.600e-17 Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0 Query: 34 GGLEGTVTTTWVKCEVDPHCCCAELGTEGPIRVDFVASNGKNAGRLG 81 GGLEG VTTTWVKCEVDPHCCCAELGTEGPIRVDFVA G+NAGRLG Sbjct: 114 GGLEGVVTTTWVKCEVDPHCCCAELGTEGPIRVDFVADQGRNAGRLG 160
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_007257367.2 (protein TSSC1 [Astyanax mexicanus]) HSP 1 Score: 89.4 bits (220), Expect = 2.800e-14 Identity = 79/315 (25.08%), Postives = 125/315 (39.68%), Query Frame = 0 Query: 89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398 V+YG + Q+R L A + + RFLVG L+ N++ ++++ ++ N + + H GEIWHIS SP D + C+ ++ +WR+PL +S H SPD + + T CVLW E G ++V+++ + L+ L SST + S SS L G + + + W P HN ++AT T++ WDLR S+ QI + + HG RD+DFN +K YY + G Sbjct: 7 VIYGLEFQARALTAQTAE-TDAIRFLVGTQSLKFD--NQIHIIDFDDENNIINKNVLLHHAGEIWHISASPADKGVLTTCYNKTSESRVLTCAAVWRMPL-------------------EWESGSHESPDDSSNSPQTL----------------------------------ELLCHLDNTAHGNTACVLW---EPMGDGKRVISLADSHVVLWDLQESSTKATIS----SSATLEGKGQLKFTSGKWSPHHNCTQLATANDTAIRGWDLR----------SMSQIFCIENAHGQLVRDLDFNPNKQYYLASCG 248
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_017287201.1 (PREDICTED: protein TSSC1 [Kryptolebias marmoratus]) HSP 1 Score: 87.4 bits (215), Expect = 1.100e-13 Identity = 79/315 (25.08%), Postives = 126/315 (40.00%), Query Frame = 0 Query: 89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398 V+YG + Q+R L A G+ + RFLVG L+ N++ ++++ ++ N + + GEIWHI+ SP D A+ C+ ++ +WR+P S +S H SPD A T CVLW E G ++V+++ + A L+ L SST + S S+ L G + + + W P HN ++AT T++ WDLRT + QI + + HG RD+DFN ++ YY + G Sbjct: 7 VIYGLEFQARALTAQTGE-TDAIRFLVGTQSLKFD--NQIHIIDFDDENNIINKNVLLHQAGEIWHIAASPADKAVLSTCYNKTSDSRVVSCAAVWRMP-------------------SDWESGSHESPDDSAHNPQTL----------------------------------ELLCHLDDSSHGNAACVLW---EPMGDGKRVISLADNHALLWDLQESSTQATVS----STATLEGKGQLKFTSGKWSPHHNCSQLATANDTAIRGWDLRT----------MSQIYCIENAHGQLVRDLDFNPNRQYYLASCG 248
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_013885079.1 (PREDICTED: protein TSSC1 [Austrofundulus limnaeus]) HSP 1 Score: 86.3 bits (212), Expect = 2.400e-13 Identity = 79/315 (25.08%), Postives = 125/315 (39.68%), Query Frame = 0 Query: 89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398 V+YG + Q+R L A G+ + RFLVG L+ N++ ++++ ++ N + + GEIWHI+ SP D A+ C+ ++ +WR+P S +S H SPD A T CVLW E G ++V+++ + A L+ L SST + S S+ L G + + + W P HN ++AT T++ WDLRT + QI + HG RD+DFN ++ YY + G Sbjct: 7 VIYGLEFQARALTAQTGE-TDAIRFLVGTQSLKFD--NQIHIIDFDDENNIINKNVLLHQAGEIWHIAASPADKAVLSTCYNKTSDSRVVSCAAVWRMP-------------------SDWESGSHESPDDSAHNPQTL----------------------------------ELLCHLDDSSRGNAACVLW---EPMGDGKRVISLADNHALLWDLQESSTRATVS----STATLEGKGQLKFTSGKWSPHHNCSQLATANDTAIRGWDLRT----------MSQIYCIESTHGQLVRDLDFNPNRQYYLASCG 248
BLAST of NO20G00820 vs. NCBI_GenBank
Match: ACO13977.1 (TSSC1 [Esox lucius]) HSP 1 Score: 85.9 bits (211), Expect = 3.100e-13 Identity = 80/317 (25.24%), Postives = 128/317 (40.38%), Query Frame = 0 Query: 87 GAVVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398 G V+YG + Q+R L + + + RFLVG L+ N++ ++++ ++ N + ++ GEIWHIS SP D A+ C+ ++ + +WR+P P E S H S + Q+ CVLW E G ++V+++ + A L+ L+ SST + S SS L G + + + W P HN ++AT T++ WDLRT K QI + + HG RD+DFN +K YY + G Sbjct: 5 GPVIYGLEFQARALTSQTAE-SDAIRFLVGTQSLKFD--NQIHIIDFDDENNIISKSVLQHEAGEIWHISASPADKAVLTTCYNITSESRVVTSGAVWRMP------------PEWESGSHESPDDPHNSHNPQSL---------------------------------------DLLCHLDNSAHGNASCVLW---EPMGDGKRVISLADNHALLWDLTESSTQATIS----SSATLEGKGQLKFTSGKWSPHHNCTQLATANDTAIRGWDLRTMK----------QIYCIENAHGQLVRDLDFNPNKQYYLASCG 250
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_010877439.1 (PREDICTED: protein TSSC1 [Esox lucius]) HSP 1 Score: 85.9 bits (211), Expect = 3.100e-13 Identity = 80/317 (25.24%), Postives = 128/317 (40.38%), Query Frame = 0 Query: 87 GAVVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398 G V+YG + Q+R L + + + RFLVG L+ N++ ++++ ++ N + ++ GEIWHIS SP D A+ C+ ++ + +WR+P P E S H S + Q+ CVLW E G ++V+++ + A L+ L+ SST + S SS L G + + + W P HN ++AT T++ WDLRT K QI + + HG RD+DFN +K YY + G Sbjct: 5 GPVIYGLEFQARALTSQTAE-SDAIRFLVGTQSLKFD--NQIHIIDFDDENNIISKSVLQHEAGEIWHISASPADKAVLTTCYNITSESRVVTSGAVWRMP------------PEWESGSHESPDDPHNSHNPQSL---------------------------------------DLLCHLDNSAHGNASCVLW---EPMGDGKRVISLADNHALLWDLTESSTQATIS----SSATLEGKGQLKFTSGKWSPHHNCTQLATANDTAIRGWDLRTMK----------QIYCIENAHGQLVRDLDFNPNKQYYLASCG 250
BLAST of NO20G00820 vs. NCBI_GenBank
Match: EPB83926.1 (hypothetical protein HMPREF1544_09316 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 85.5 bits (210), Expect = 4.100e-13 Identity = 83/319 (26.02%), Postives = 124/319 (38.87%), Query Frame = 0 Query: 84 MYSGAVVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAALCFTSSTRKGTDP---ACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSL--STSSTSSDNSAQEISSFILGGPEKGEVQTAAWDPHNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHGARDVDFNRSKPYYFVTGG 398 M + V+G ++Q+RCL V E+ +FL G G ++ N + LLEY +D + + Y HP E+W I P D L FT + +P TLWR P + +EG R H+ + T +R VLW E+ +Q++A+D + L S+ TS S P ++Q A W+PH ++ TV +V+ WDLR+GK S ++ AH+ R VD+N +KPY VTGG Sbjct: 1 MAENSSVFGLRHQARCLTPVTSSTEQS-KFLAGTVGAKD---NVVCLLEY-DDDDTIITPTMYNHPEEVWDIVSCPTDEHLLFTCHSPVSGNPLNRKATLWRKP----------AITKDEGG---------RDQRHELTSLVTL-------------------------------------------EQEGIRKVLWDPKEQ---NQQIIAIDSNQLYLTSIHDDACQTSLTMDVSPTFSTDSNSPSLRQLQNAVWNPHQ-PEIITVGDRTVSGWDLRSGKSSFSRAN--------AHKSTIRAVDYNPNKPYCVVTGG 240
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_018950649.1 (PREDICTED: protein TSSC1-like [Cyprinus carpio]) HSP 1 Score: 85.5 bits (210), Expect = 4.100e-13 Identity = 79/315 (25.08%), Postives = 126/315 (40.00%), Query Frame = 0 Query: 89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHG--ARDVDFNRSKPYYFVTGG 398 V+YG + Q+R L A + + RFLVG L+ N++ ++++ ++ N + ++ GEIWHIS SP D A+ C++ ++ +WR+P +S H SPD + T V CVLW E G ++++++ E L+ L SST + S S+ L G + + T W P HN ++AT T++ WDLR S+ QI + + HG RD+DFN +K YY + G Sbjct: 9 VIYGLEFQARALTAQTAE-TDAIRFLVGTQSLKFD--NQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVLTTCYSKTSESRVLTCAAVWRMP-------------------PEWESGNHESPDDSSNNPQTL----------------------------------ELLCHLDNTAHGSVACVLW---EPMGDGKRLISLAENHVLLWDLQESSTKAKIS----STATLEGKGQLKFTTGKWSPHHNSTQLATANDTAIRGWDLR----------SMSQIYCIENAHGQLVRDLDFNPNKQYYLASCG 250
BLAST of NO20G00820 vs. NCBI_GenBank
Match: XP_016335934.1 (PREDICTED: protein TSSC1 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 85.1 bits (209), Expect = 5.400e-13 Identity = 79/313 (25.24%), Postives = 122/313 (38.98%), Query Frame = 0 Query: 89 VVYGAKNQSRCLAAVCGDHEEGHRFLVGAAGLREQPHNELLLLEYFEDTNNVKEACTYRHPGEIWHISPSPRDAAL---CFTSSTRKGTDPACTLWRLPLPSSSAFSPSSSPTEEGDQSASQSSVHRSPDHQAFATSTFFPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRCVLWSLGEEAGAQEQVLAVDEGKATLYSLSTSSTSSDNSAQEISSFILGGPEKGEVQTAAWDP-HNLYKVATVQGTSVTHWDLRTGKPSGQASSSLPQIAELAHRHGARDVDFNRSKPYYFVTGG 398 V+YG + Q+R L A + + RF+VG L+ N++ ++++ ++ N + ++ GEIWHIS SP D A+ C++ ++ +WR+P +S H SPD + T V CVLW E G ++V+++ E L+ L SST + S SS L G + + W P HN ++AT T++ WDLR S S E AH RD+DFN +K YY + G Sbjct: 7 VIYGLEFQARALTAQTAE-TDAIRFVVGTQSLKFD--NQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVLTTCYSKTSESRVLTCAAVWRMP-------------------PEWESGSHESPDDSSNNPQTL----------------------------------ELLCHLDNTTHGSVACVLW---EPMGDGKRVISLAENHVLLWDLQESSTKATIS----SSATLEGKGQLKFTAGKWSPHHNSTQLATANDTAIRGWDLR--------SMSQIYCIESAHGQLVRDLDFNPNKQYYLASCG 248 The following BLAST results are available for this feature:
BLAST of NO20G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00820 ID=NO20G00820|Name=NO20G00820|organism=Nannochloropsis oceanica|type=gene|length=2162bpback to top protein sequence of NO20G00820.1 >NO20G00820.1-protein ID=NO20G00820.1-protein|Name=NO20G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=402bpback to top Synonyms
Publications
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