NO20G00760, NO20G00760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00760 vs. NCBI_GenBank
Match: XP_005854198.1 (phosphoglycerate mutase, partial [Nannochloropsis gaditana CCMP526] >EKU22162.1 phosphoglycerate mutase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 146.7 bits (369), Expect = 1.500e-31 Identity = 84/177 (47.46%), Postives = 103/177 (58.19%), Query Frame = 0 Query: 1 MVPFPQSFLPPPSSRLATPPLVIFYIVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIVQELQGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDKDLREIAGGVREGRSLTLSLKEVTAQAA 178 M+PF P AT PLV+FYI+RHGESTGNR G+LQGQRDYPLT+TG++QA GRRLR++A Q+ DVS FF IY+SDLTRAK+TAE+IV+EL G + TLD DLREI+GG REG+ L LSL+E + A Sbjct: 1 MLPFSPPSHPAKRKHFATSPLVVFYIIRHGESTGNRQGILQGQRDYPLTDTGRQQAQETGRRLRQDASLQDLETGDVSCFFDRIYSSDLTRAKNTAEIIVEELTGGK----RQPSKDPSHHGSNDTSSNTCHNDDNANDIGLESLLTLDTDLREISGGAREGQPLGLSLQEAMRRTA 173
BLAST of NO20G00760 vs. NCBI_GenBank
Match: WP_017870404.1 (histidine phosphatase family protein [Deinococcus wulumuqiensis]) HSP 1 Score: 73.9 bits (180), Expect = 1.300e-9 Identity = 44/103 (42.72%), Postives = 57/103 (55.34%), Query Frame = 0 Query: 11 PPSSRLA----TPP----LVIFYIVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIVQELQG 106 PPS RLA TPP F++VRHGEST N DG QGQ D PL+ G QAA + RL ++ F +Y+SDL RA+ TAE++ + L+G Sbjct: 8 PPSKRLAPTGFTPPDRATAAEFWVVRHGESTWNADGRYQGQTDVPLSALGALQAASLAERLTGQS-------------FDAVYSSDLARARQTAEVVAERLEG 97
BLAST of NO20G00760 vs. NCBI_GenBank
Match: WP_103128788.1 (histidine phosphatase family protein [Deinococcus aerius] >GBF05348.1 phosphoglycerate mutase [Deinococcus aerius]) HSP 1 Score: 72.8 bits (177), Expect = 2.800e-9 Identity = 43/102 (42.16%), Postives = 53/102 (51.96%), Query Frame = 0 Query: 5 PQSFLPPPSSRLATPPLVIFYIVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIVQELQGK 107 P FL PP R AT F++VRHGEST N DG QGQ D PL+ G QAA + RL F +Y+SDL RA TAE++ + L G+ Sbjct: 7 PTGFL-PPERRTATE----FWVVRHGESTWNADGRYQGQTDVPLSHIGILQAATLAERL-------------TGMHFDAVYSSDLARASQTAEMVAERLSGR 90
BLAST of NO20G00760 vs. NCBI_GenBank
Match: XP_011442949.1 (PREDICTED: fructose-2,6-bisphosphatase TIGAR isoform X2 [Crassostrea gigas] >XP_011442950.1 PREDICTED: fructose-2,6-bisphosphatase TIGAR isoform X1 [Crassostrea gigas]) HSP 1 Score: 70.9 bits (172), Expect = 1.100e-8 Identity = 56/180 (31.11%), Postives = 78/180 (43.33%), Query Frame = 0 Query: 26 IVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIVQELQGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDKDLREIAGGVREGRSLTLSLKEVTAQAARELHLSVDQFQAPPFETLNDLLSRAHRF 206 IVRHGE++ NR+G++QGQ D PL++ G QA +V +RL+KE+ F I +SDL+RAK TAE IVQ D+ LRE GV EG+ +E+ A + H S +F P ET+ ++ RA F Sbjct: 8 IVRHGETSYNRNGIIQGQTDIPLSDVGLEQARLVAQRLQKES-------------FTHIISSDLSRAKETAEAIVQTNTASS------------------------------------CPLNFDERLRERRFGVYEGK----PSRELMEAAKQNSHRSWTEFSPPGGETMKEVHERAVTF 134
BLAST of NO20G00760 vs. NCBI_GenBank
Match: WP_019585098.1 (histidine phosphatase family protein [Deinococcus apachensis]) HSP 1 Score: 70.1 bits (170), Expect = 1.800e-8 Identity = 41/101 (40.59%), Postives = 49/101 (48.51%), Query Frame = 0 Query: 5 PQSFLPPPSSRLATPPLVIFYIVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIVQELQG 106 P FLPP R F++VRHGEST N DG QGQ D PL+ G QAA + RL F +Y+SDL RA TAE + + L G Sbjct: 7 PTGFLPPDRRRATE-----FWVVRHGESTWNADGRYQGQTDVPLSHIGILQAATLAERL-------------TGMHFDAVYSSDLARASQTAETVAERLVG 89
BLAST of NO20G00760 vs. NCBI_GenBank
Match: WP_034358535.1 (histidine phosphatase family protein [Deinococcus phoenicis] >EYB67519.1 phosphoglycerate mutase [Deinococcus phoenicis]) HSP 1 Score: 69.3 bits (168), Expect = 3.100e-8 Identity = 40/101 (39.60%), Postives = 51/101 (50.50%), Query Frame = 0 Query: 5 PQSFLPPPSSRLATPPLVIFYIVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIVQELQG 106 P + P R AT F++VRHGEST N DG QGQ D PL+ G QA+ + RL F +Y+SDLTRA TAE++ + L G Sbjct: 6 PPTGFVAPDRRTATE----FWVVRHGESTWNADGRYQGQTDVPLSHVGILQASTLAERL-------------TGQHFDAVYSSDLTRASQTAEIVAERLSG 89
BLAST of NO20G00760 vs. NCBI_GenBank
Match: CBN78654.1 (Phosphoglycerate mutase [Ectocarpus siliculosus]) HSP 1 Score: 68.6 bits (166), Expect = 5.400e-8 Identity = 36/85 (42.35%), Postives = 48/85 (56.47%), Query Frame = 0 Query: 21 LVIFYIVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIVQELQG 106 L + VRHGE+T NR+G++QG +DY LT G QA RLR + + Y+SDLTRA HTAE+I++E G Sbjct: 5 LCTLHFVRHGETTANREGIIQGHQDYDLTPIGINQAVATAIRLR-------------GNTYWQTYSSDLTRASHTAEIILEEHAG 76
BLAST of NO20G00760 vs. NCBI_GenBank
Match: WP_084049724.1 (histidine phosphatase family protein [Deinococcus hopiensis] >SMB94609.1 probable phosphoglycerate mutase [Deinococcus hopiensis KR-140]) HSP 1 Score: 68.6 bits (166), Expect = 5.400e-8 Identity = 42/102 (41.18%), Postives = 53/102 (51.96%), Query Frame = 0 Query: 5 PQSFLPPPSSRLATPPLVIFYIVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIVQELQGK 107 P + L P R AT F++VRHGEST N G QGQ D PL+ G QAA + RL + F +Y+SDL RA TAE +V+ LQG+ Sbjct: 6 PPTGLTAPDRRSATE----FWVVRHGESTWNASGRYQGQTDVPLSPVGVLQAAALAERLTGQR-------------FDAVYSSDLARAFQTAEAVVERLQGQ 90
BLAST of NO20G00760 vs. NCBI_GenBank
Match: PPR06427.1 (hypothetical protein CVT26_004839 [Gymnopilus dilepis]) HSP 1 Score: 68.6 bits (166), Expect = 5.400e-8 Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 0 Query: 20 PLVIFYIVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIV 101 PL+ Y+VRHGE+ NRDG++QG ++ L ETG+ QA +VG R R E + D+ +Y SDLTRA+ TAE I+ Sbjct: 16 PLMRVYLVRHGETQENRDGIIQGHKNTVLNETGQEQARIVGERFR-------ETKIDI------LYTSDLTRARSTAEAIL 83
BLAST of NO20G00760 vs. NCBI_GenBank
Match: WP_104991117.1 (histidine phosphatase family protein [Deinococcus sp. NW-56]) HSP 1 Score: 68.6 bits (166), Expect = 5.400e-8 Identity = 39/95 (41.05%), Postives = 48/95 (50.53%), Query Frame = 0 Query: 12 PSSRLATPPLVIFYIVRHGESTGNRDGVLQGQRDYPLTETGKRQAAVVGRRLRKEAGSQEEGEDDVSSFFQGIYASDLTRAKHTAELIVQELQGK 107 P R AT F++VRHGEST N DG QGQ D PL+ G QAA + RL F +Y SDLTRA TA+ + + L G+ Sbjct: 12 PDRRTATE----FWVVRHGESTWNADGRYQGQTDVPLSHIGVLQAAALAERL-------------TGQHFDAVYTSDLTRASQTADAVAERLAGQ 89 The following BLAST results are available for this feature:
BLAST of NO20G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00760 ID=NO20G00760|Name=NO20G00760|organism=Nannochloropsis oceanica|type=gene|length=2426bpback to top protein sequence of NO20G00760.1 >NO20G00760.1-protein ID=NO20G00760.1-protein|Name=NO20G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=415bpback to top Synonyms
Publications
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