NO20G00700, NO20G00700 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G00700
Unique Name	NO20G00700
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3165
Alignment location	chr20:237670..240834 +

Link to JBrowse

Properties


Property Name	Value
Description	Phosphoribosylaminoimidazole-succinocarboxamide synthase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:237670..240834 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR028923	SAICAR_synt/ADE2_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process
GO:0006139	nucleobase-containing compound metabolic process

Homology

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BLAST of NO20G00700 vs. NCBI_GenBank
Match: XP_012895326.1 (uncharacterized protein [Blastocystis hominis] >CBK21278.2 unnamed protein product [Blastocystis hominis])

HSP 1 Score: 436.0 bits (1120), Expect = 9.900e-119
Identity = 196/310 (63.23%), Postives = 244/310 (78.71%), Query Frame = 0

Query:   12 ISQAQTKTEAYLPRIDSQRAHTVGSTDLEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTEDGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITGD 322
            ++ +  +T++YL +ID  R +T+  T+LEG    +  Y+GKVRD +   D +VLI+TDR S FDR L ++PFKGQVLNLTS WWF+Q++ +VPNH+LA+P  N  +G+KCT FP+EFVMRGYITGST TSLWTNY+ GVR+YCG  LP+GLKKNQKL  NL+TPTTK   HDELIS ++++  G MS+EDWD CA  ++ LFAFGQ+VA E GLILVDTKYEFGK E+G I ++DEIHTPDSSRYW++ TYEAR   G  P+NIDKEFLR W++  CDPYKD  +PEAPADLVNELSRRYI LYE ITG+
Sbjct:  144 VADSDIRTKSYLSKIDQARCNTLSKTNLEG-INVQNLYIGKVRDRFECNDKVVLITTDRMSGFDRQLCTVPFKGQVLNLTSAWWFKQTEHIVPNHVLAIPDANVTIGRKCTPFPIEFVMRGYITGSTSTSLWTNYQNGVRKYCGIDLPEGLKKNQKLWENLITPTTKSDEHDELISPEDVVKRGFMSQEDWDYCAQKARELFAFGQKVADEHGLILVDTKYEFGKDENGMIRLIDEIHTPDSSRYWISSTYEARFAAGENPDNIDKEFLRTWYRTHCDPYKDEVIPEAPADLVNELSRRYIQLYELITGE 452

[Close]

BLAST of NO20G00700 vs. NCBI_GenBank
Match: OWZ08753.1 (Phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora megakarya])

HSP 1 Score: 435.3 bits (1118), Expect = 1.700e-118
Identity = 204/313 (65.18%), Postives = 251/313 (80.19%), Query Frame = 0

Query:    9 SALISQAQTKTEAYLPRIDSQRAHTVGS-TDLEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTEDGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITG 321
            S ++++A+ +T++YLP+I++ +A TV S   L    P  ++  GKVRDVY   D ++L+STDRQSAFDR LAS+PFK +VL LTS WWF Q+K++V NH+L VPHP+A + KKCTVFPVEFV+RGYITGST TS+WTNYK G R +CGH LPDG K++QKL  NL+TPTTKD  HDELIS  EI++SGRM++E WD C   +  LFAFGQ  AA+RGL+LVDTKYEFG  E G+I+++DEIHTPDSSRYW+AE+YE RM +G  PENIDKEFLRLWFKD CDPYKD  LPEAP +LV+ELSRRYIMLYE ITG
Sbjct:    2 SVIVAEAEKRTKSYLPKIENGQALTVTSLAALSKELPAFRQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKNIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITGSTSTSMWTNYKNGNRDFCGHKLPDGYKQHQKLPQNLVTPTTKD-EHDELISGLEIVSSGRMTQEQWDYCEKKTLELFAFGQEQAAKRGLVLVDTKYEFGYDEAGEIMLIDEIHTPDSSRYWLAESYEQRMAEGKSPENIDKEFLRLWFKDHCDPYKDEVLPEAPKELVSELSRRYIMLYELITG 313

[Close]

BLAST of NO20G00700 vs. NCBI_GenBank
Match: XP_009531098.1 (hypothetical protein PHYSODRAFT_513619 [Phytophthora sojae] >EGZ13669.1 hypothetical protein PHYSODRAFT_513619 [Phytophthora sojae])

HSP 1 Score: 430.3 bits (1105), Expect = 5.400e-117
Identity = 200/314 (63.69%), Postives = 248/314 (78.98%), Query Frame = 0

Query:    9 SALISQAQTKTEAYLPRIDSQRAHTVGS-TDLEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTE-DGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITG 321
            SA++++ + +T+ YLP+I+S RA T  S   L    P  ++  GKVRDVY   D ++L+STDRQSAFDR LAS+PFK +VL LTS WWF Q+K +V NH+L VPHP+A + +KCTVFPVEFV+RGYITGST TS+WTNYK G R +CGH LPDG K++QKL  NL+TPTTKD  HDELIS  E+++SGRM++E WD C   +  LFAFGQ  AA+RGLILVDTKYEFG  E  G+I+++DEIHTPDSSRYW+A++YE R+ +G  PENIDKEFLRLWFK+ CDPY DA LPEAP +LV+ELSRRYI+LYE ITG
Sbjct:    2 SAVVAEVEKRTQTYLPQIESGRALTATSLATLSQELPAFRQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKHIVANHLLGVPHPSAMLCRKCTVFPVEFVVRGYITGSTSTSMWTNYKNGSRDFCGHKLPDGFKQHQKLPENLVTPTTKDDEHDELISGLEVVSSGRMTQEQWDFCEKKTLELFAFGQEQAAKRGLILVDTKYEFGVDEATGEILLIDEIHTPDSSRYWLADSYEQRLAEGKSPENIDKEFLRLWFKEHCDPYNDAVLPEAPKELVSELSRRYILLYELITG 315

[Close]

BLAST of NO20G00700 vs. NCBI_GenBank
Match: XP_002903172.1 (phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora infestans T30-4] >EEY55596.1 phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora infestans T30-4])

HSP 1 Score: 430.3 bits (1105), Expect = 5.400e-117
Identity = 202/314 (64.33%), Postives = 247/314 (78.66%), Query Frame = 0

Query:    9 SALISQAQTKTEAYLPRIDSQRAHTVGS-TDLEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTE-DGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITG 321
            S ++++A+ +T+ YLP+I++ R  T  S   L    P  K+  GKVRDVY   D ++L+STDRQSAFDR LAS+PFK +VL LTS WWF Q+K +V NH+L VPHP+A + KKCTVFPVEFV+RGYITGST TS+WTNYK G R +CGH L DG K++QKL  NL+TPTTKD  HDELIS  EI++SGRM++E WD C   +  LFAFGQ  AA+RGLILVDTKYEFG  E  G+I+++DEIHTPDSSRYW+A++YE RM +G  PENIDKEFLRLWFK+RCDPY DA LPEAP +LV+ELSRRYI+LYE ITG
Sbjct:    2 SVIVAEAEKRTQTYLPKIENGRTLTATSLAALSKELPAFKQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKHIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITGSTSTSMWTNYKNGSRDFCGHKLQDGYKQHQKLPQNLVTPTTKDDEHDELISGVEIVSSGRMTQEQWDYCEKKTLELFAFGQEQAAKRGLILVDTKYEFGYDEATGEILLIDEIHTPDSSRYWLADSYEQRMAEGKSPENIDKEFLRLWFKERCDPYNDAVLPEAPKELVSELSRRYILLYELITG 315

[Close]

BLAST of NO20G00700 vs. NCBI_GenBank
Match: CBJ28207.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 429.9 bits (1104), Expect = 7.100e-117
Identity = 202/322 (62.73%), Postives = 242/322 (75.16%), Query Frame = 0

Query:    5 AAPTSALISQAQTKTEAYLPRI-----DSQRAHTVGSTDLEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKL-AANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTEDGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITG 321
            A   + +++ AQ KT+ YL RI     DS R     S   +    + K+ VGKVRD Y   D++VL++TDRQSAFDR LA +PFKG VLN TS WWFE+++ + PNH+L  PHPN CVGKKC VFP+EFVMRGY+TGST TS+W NY++G R YCGH LP+G+ KNQ L   N+LTPTTKD  HDELISA EI++S RMS++DWD C+  + ALF FGQ  AAERGLILVDTKYE GK  DG II+VDEIHTPDSSRYWV ETYE  ++QG EPENIDKEFLR W+   CDPYKD T+P+AP +LV ELSRRY+MLYE ITG
Sbjct:   14 ALSLAKVVADAQEKTKKYLGRIEAAVDDSARQCIAESRLDQQLVGHSKRTVGKVRDTYICDDAIVLVTTDRQSAFDRQLARVPFKGAVLNQTSAWWFEKTRHIAPNHLLGSPHPNVCVGKKCKVFPIEFVMRGYLTGSTSTSIWKNYEKGTRAYCGHTLPEGMSKNQALPMGNILTPTTKDDLHDELISAQEIVSSNRMSQQDWDECSRLAHALFRFGQEAAAERGLILVDTKYELGKDADGNIILVDEIHTPDSSRYWVKETYEGNISQGREPENIDKEFLRRWYTQHCDPYKDETVPDAPRELVAELSRRYVMLYEIITG 335

[Close]

BLAST of NO20G00700 vs. NCBI_GenBank
Match: GAY06374.1 (phosphoribosylaminoimidazolesuccinocarboxamide synthase [Pythium insidiosum])

HSP 1 Score: 427.6 bits (1098), Expect = 3.500e-116
Identity = 197/319 (61.76%), Postives = 252/319 (79.00%), Query Frame = 0

Query:    4 AAAPTSALISQAQTKTEAYLPRIDSQRAHTVGSTD-LEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTEDGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITGD 322
            +++P+S+ I  AQ +T  Y+ RI+ +   T  S D +    P  ++ VGKVRDVY   D+++L+STDRQSAFDR LASIPFKG+VL LTS WWF  ++ +VPNH+L+ PHP+A + KKCTVFPVEFV+RGY+TGST TS+WTNY +GVR +CGH L DG  ++QKL  N++TPTTKD  HDELIS +E++ SGRM++  WD C++ +  LFAFGQ+ AA+RGLILVDTKYEFG   +G+I+++DEIHTPDSSRYW+A +YE R+ +G  PENIDKEFLRLWFK+ CDPYKDA LPEAP +LV ELSRRYI+LYE ITGD
Sbjct:    2 SSSPSSSPIDDAQQRTRDYVARINPRDVLTATSLDAIAAELPAFRQIVGKVRDVYVFDDAVLLVSTDRQSAFDRALASIPFKGRVLTLTSVWWFRATQHIVPNHLLSTPHPSAMLCKKCTVFPVEFVVRGYLTGSTSTSMWTNYAKGVRDFCGHRLDDGWTQHQKLPRNMVTPTTKDDVHDELISGEEVVRSGRMTQAQWDYCSAKALELFAFGQQEAAKRGLILVDTKYEFGVDANGEILLIDEIHTPDSSRYWLAHSYEERLAKGESPENIDKEFLRLWFKEHCDPYKDAVLPEAPVELVLELSRRYILLYELITGD 320

[Close]

BLAST of NO20G00700 vs. NCBI_GenBank
Match: GAX97013.1 (phosphoribosylaminoimidazolesuccinocarboxamide synthase [Pythium insidiosum])

HSP 1 Score: 427.6 bits (1098), Expect = 3.500e-116
Identity = 197/319 (61.76%), Postives = 252/319 (79.00%), Query Frame = 0

Query:    4 AAAPTSALISQAQTKTEAYLPRIDSQRAHTVGSTD-LEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTEDGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITGD 322
            +++P+S+ I  AQ +T  Y+ RI+ +   T  S D +    P  ++ VGKVRDVY   D+++L+STDRQSAFDR LASIPFKG+VL LTS WWF  ++ +VPNH+L+ PHP+A + KKCTVFPVEFV+RGY+TGST TS+WTNY +GVR +CGH L DG  ++QKL  N++TPTTKD  HDELIS +E++ SGRM++  WD C++ +  LFAFGQ+ AA+RGLILVDTKYEFG   +G+I+++DEIHTPDSSRYW+A +YE R+ +G  PENIDKEFLRLWFK+ CDPYKDA LPEAP +LV ELSRRYI+LYE ITGD
Sbjct:    2 SSSPSSSPIDDAQQRTRDYVARINPRDVLTATSLDAIAAELPAFRQIVGKVRDVYVFDDAVLLVSTDRQSAFDRALASIPFKGRVLTLTSVWWFRATQHIVPNHLLSTPHPSAMLCKKCTVFPVEFVVRGYLTGSTSTSMWTNYAKGVRDFCGHRLDDGWTQHQKLPRNMVTPTTKDDVHDELISGEEVVRSGRMTQAQWDYCSAKALELFAFGQQEAAKRGLILVDTKYEFGVDANGEILLIDEIHTPDSSRYWLAHSYEERLAKGESPENIDKEFLRLWFKEHCDPYKDAVLPEAPVELVLELSRRYILLYELITGD 320

[Close]

BLAST of NO20G00700 vs. NCBI_GenBank
Match: XP_008893322.1 (phosphoribosylaminoimidazolesuccinocarboxamide synthase [Phytophthora parasitica INRA-310] >ETK85087.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase [Phytophthora parasitica] >ETL38511.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase [Phytophthora parasitica] >ETL91612.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase [Phytophthora parasitica] >ETN21539.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase [Phytophthora parasitica INRA-310] >ETP14930.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase [Phytophthora parasitica CJ01A1] >ETP42997.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase [Phytophthora parasitica P10297] >KUF80780.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora nicotianae] >KUF90802.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora nicotianae] >KUF95798.1 Pre-mRNA-splicing factor SYF1 [Phytophthora nicotianae])

HSP 1 Score: 427.2 bits (1097), Expect = 4.600e-116
Identity = 202/314 (64.33%), Postives = 246/314 (78.34%), Query Frame = 0

Query:    9 SALISQAQTKTEAYLPRIDSQRAHTVGS-TDLEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTE-DGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITG 321
            S ++++A+ +T+AYL +I++ +  T  S   L    P  K+  GKVRDVY   D ++L+STDRQSAFDR LAS+PFK +VL LTS WWF Q+K +V NH+L VPHP+A + KKCTVFPVEFV+RGYITGST TS+WTNYK G R +CGH L DG K++QKL  NL+TPTTKD  HDELIS  EI+ SGRM++E WD C   +  LFAFGQ  AA+RGLILVDTKYEFG  E  G+I+++DEIHTPDSSRYW+A++YE RM +G  PENIDKEFLRLWFK+RCDPY DA LPEAP +LV+ELSRRYIMLYE ITG
Sbjct:    2 SVIVAEAEKRTQAYLSKIENGQTLTATSLAALSKELPAFKQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKHIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITGSTSTSMWTNYKNGSRDFCGHKLKDGYKQHQKLPQNLVTPTTKDDEHDELISGVEIVRSGRMTQEQWDYCEKKTLELFAFGQEQAAKRGLILVDTKYEFGFDEATGEILLIDEIHTPDSSRYWLADSYEQRMAEGKSPENIDKEFLRLWFKERCDPYNDAVLPEAPKELVSELSRRYIMLYELITG 315

[Close]

BLAST of NO20G00700 vs. NCBI_GenBank
Match: ETM44925.1 (phosphoribosylaminoimidazolesuccinocarboxamide synthase [Phytophthora parasitica])

HSP 1 Score: 427.2 bits (1097), Expect = 4.600e-116
Identity = 202/314 (64.33%), Postives = 246/314 (78.34%), Query Frame = 0

Query:    9 SALISQAQTKTEAYLPRIDSQRAHTVGS-TDLEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTE-DGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITG 321
            S ++++A+ +T+AYL +I++ +  T  S   L    P  K+  GKVRDVY   D ++L+STDRQSAFDR LAS+PFK +VL LTS WWF Q+K +V NH+L VPHP+A + KKCTVFPVEFV+RGYITGST TS+WTNYK G R +CGH L DG K++QKL  NL+TPTTKD  HDELIS  EI+ SGRM++E WD C   +  LFAFGQ  AA+RGLILVDTKYEFG  E  G+I+++DEIHTPDSSRYW+A++YE RM +G  PENIDKEFLRLWFK+RCDPY DA LPEAP +LV+ELSRRYIMLYE ITG
Sbjct:    2 SVIVAEAEKRTQAYLSKIENGQTLTATSLAALSKELPAFKQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKHIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITGSTSTSMWTNYKNGSRDFCGHKLEDGYKQHQKLPQNLVTPTTKDDEHDELISGVEIVRSGRMTQEQWDYCEKKTLELFAFGQEQAAKRGLILVDTKYEFGFDEATGEILLIDEIHTPDSSRYWLADSYEQRMAEGKSPENIDKEFLRLWFKERCDPYNDAVLPEAPKELVSELSRRYIMLYELITG 315

[Close]

BLAST of NO20G00700 vs. NCBI_GenBank
Match: ETO73726.1 (phosphoribosylaminoimidazolesuccinocarboxamide synthase [Phytophthora parasitica P1976])

HSP 1 Score: 427.2 bits (1097), Expect = 4.600e-116
Identity = 202/314 (64.33%), Postives = 246/314 (78.34%), Query Frame = 0

Query:    9 SALISQAQTKTEAYLPRIDSQRAHTVGS-TDLEGAFPYEKKYVGKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSKDLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGVRQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKEDWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTE-DGQIIIVDEIHTPDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAPADLVNELSRRYIMLYECITG 321
            S ++++A+ +T+AYL +I++ +  T  S   L    P  K+  GKVRDVY   D ++L+STDRQSAFDR LAS+PFK +VL LTS WWF Q+K +V NH+L VPHP+A + KKCTVFPVEFV+RGYITGST TS+WTNYK G R +CGH L DG K++QKL  NL+TPTTKD  HDELIS  EI+ SGRM++E WD C   +  LFAFGQ  AA+RGLILVDTKYEFG  E  G+I+++DEIHTPDSSRYW+A++YE RM +G  PENIDKEFLRLWFK+RCDPY DA LPEAP +LV+ELSRRYIMLYE ITG
Sbjct:    2 SVIVAEAEKRTQAYLSKIENGQTLTATSLAALSKELPAFKQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKHIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITGSTSTSMWTNYKNGSRDFCGHKLKDGYKQHQKLPQNLVTPTTKDDEHDELISGVEIVRSGRMTQEQWDYCEKKTLELFAFGQEQAAKRGLILVDTKYEFGFDEATGEILLIDEIHTPDSSRYWLADSYEQRMAEGKSPENIDKEFLRLWFKERCDPYNDAVLPEAPKELVSELSRRYIMLYELITG 315

The following BLAST results are available for this feature:

BLAST of NO20G00700 vs. NCBI_GenBank

BLAST of NO20G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_012895326.1	9.900e-119	63.23	uncharacterized protein [Blastocystis hominis] >CB...	[more]
OWZ08753.1	1.700e-118	65.18	Phosphoribosylaminoimidazole-succinocarboxamide sy...	[more]
XP_009531098.1	5.400e-117	63.69	hypothetical protein PHYSODRAFT_513619 [Phytophtho...	[more]
XP_002903172.1	5.400e-117	64.33	phosphoribosylaminoimidazole-succinocarboxamide sy...	[more]
CBJ28207.1	7.100e-117	62.73	conserved unknown protein [Ectocarpus siliculosus]	[more]
GAY06374.1	3.500e-116	61.76	phosphoribosylaminoimidazolesuccinocarboxamide syn...	[more]
GAX97013.1	3.500e-116	61.76	phosphoribosylaminoimidazolesuccinocarboxamide syn...	[more]
XP_008893322.1	4.600e-116	64.33	phosphoribosylaminoimidazolesuccinocarboxamide syn...	[more]
ETM44925.1	4.600e-116	64.33	phosphoribosylaminoimidazolesuccinocarboxamide syn...	[more]
ETO73726.1	4.600e-116	64.33	phosphoribosylaminoimidazolesuccinocarboxamide syn...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL024	nonsL024	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL022	nonsL022	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL021	nonsL021	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR020	ncniR020	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR068	ngnoR068	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR067	ngnoR067	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002563	NSK002563	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO20G00700.1	NO20G00700.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO20G00700.2	NO20G00700.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|594448	gene_6284	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO20G00700.1	NO20G00700.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO20G00700.2	NO20G00700.2	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence
protein sequence

gene sequence

>NO20G00700 ID=NO20G00700|Name=NO20G00700|organism=Nannochloropsis oceanica|type=gene|length=3165bp
AACCATTCCTCTGACAGACCACGGGTGCAGGTGCTGGGCGGTGCGTCATC
CTTTGTATCCGCTTGTGTCGTCATCCTAGTATTAAACCTCCTCTCCTCCC
CCCGGCTGCACTTTACTGATTCATGTCTACTGCCGCCGCCCCTACCAGCG
CGCTGATTTCTCAAGCACAAACCAAGACTGAGGCATACCTGCCAAGGATT
GACAGCCAACGAGCCCACACTGTGGGCTCCACGGATTTGGAGGGCGCGTT
TCCTTACGAAAAGAAATACGTCGgtacgtcaaattttaggcaaggagagg
aggcggagagggcaaaaagggtggggggcatggcccggatggattgacag
gaaaagaagtgtggagttgaacgaggtcttcaagtggaaatttcagcagc
accaccaccatcacaccaccagcagcagtgacaccagcagcaatagcact
gtcattccataactttctgctgctccttcgcccctcctcttcgtgcacac
gccacagcacaccttgctcccagtcacccactggacacgctcttccgtct
ccttcctccctccctccccctcacccacacatcgctcacagGCAAAGTTC
GCGATGTGTACACCACCACGGACTCCCTTGTCCTCATCTCCACGGACCGC
CAAAGCGCCTTTGACCGCAATCTGGCTTCCATTCCCTTCAAGGGGCAGGT
GCTTAATCTCACTTCCCAATGgtacattcacattagaggatggcttcttc
ttttccttccctccctctgctccatctttcctccttccgttccttcacct
ctctctcctgctctgccgtgtgacgtctctccacagcttccgtcatcgca
ctccctccttccttccttcccttcttccctcattctcccccaccctcctt
ctttcagGTGGTTTGAGCAAAGCAAGGACTTGGTGCCCAACCACATCTTA
GCCGTGCCGCACCCCAACGCCTGTGTGGGCAAGAAGTGCACCGTCTTCCC
TGTCGAATTTGTCATGCGCGGgtaagccctccctccctccctccctccca
tctttgtggcgattgcttgtctcaactgccacctcttatccatcgggaag
atggaaatctccgtatcccttacgccccctccctccctccctcccgcact
ccctccctccctcagCTACATTACCGGGTCCACGGACACCTCCCTATGGA
CGAACTACAAGAGGGGTGTGCGGCAATACTGCGGCCACGCCCTCCCCGAC
GGCCTTAAGAAGAACCAGAAGCTCGgtaaggagatacccggaggagagag
agggagagggagggagggagggagggaggatacgggtgtgtggagagtct
tcgtcagggaatggtttcggccctctctccgtctatccccctctccctcc
ctcccgccctccctctctccaattttcctctttctccttctccgcgcgtt
tccggccgccatgcctcctctctcttccctgccccctccccctcctttct
tcccccgactcatcttccctccccccctccctccctccctccctccctcc
ctcccttcccccgcagCTGCCAACCTCCTGACCCCCACAACCAAGGACGC
CACTCACGACGAGCTCATCTCCGCCGATGAAATCCTCGCCTCTGGCCGCA
TGTCCAAAGAGGACTGGGACgtaagccctctctctctccccctccctccc
ttcctccacttcaccgttgccttcctcccctccctccctccctccctccc
tagCTCTGTGCCTCCTATTCCCAAGCGCTCTTTGCCTTTGGTCAGCGAGT
GGCGGCCGAGCGTGGACTCATTCTGGTCGACACCAAATACGAATTCGGAA
AGgtacgtcttccccaccctccctccctccctccctccctccctcctctc
ggctttttctcaacagaagctgtccaatttctttcgtaccctccctccct
ccctccctccctccctccctccctccctctttccccccctttcgtagACG
GAAGACGGGCAAATCATTATCGTTGATGAAATACATACCCCGGATTCCTC
CCGCTACTGGGTCGCTGAGACCTATGAGGCGCGCATGACACAGgtaggga
gggagggagggagggagggagggggggagggagggagggagggagggagg
aggagttatacgatgggatagggtacaaacgtgcaaagtggcccactctc
ttactccctttctccttccctcttttcctccctccctccctccctccctc
cctgccttcctccctcagGGCCTGGAACCAGAGAACATTGACAAAGAATT
TCTCCGCTTGTGGTTCAAGgtacgccgctctccttccctccctccttccc
tccctccctctctctctccctccttccctttttcccccaggaccgggatg
acccctgcaagaaaatctccctccgtcactccctccctccctccctccct
ccctccctctctccctccctccctctctccctccctccctcccatcctct
catccctcgcttcctccctcgctctctcctttcccttgcacccgacctct
tacccatccctcccttcctccctccctctctccctccctcttttctgtag
GACCGATGCGACCCTTACAAGGACGCCACCCTCCCCGAGGCTCCGGCTGA
CTTGGTCAACGAGCTCTCTCGCCGGTACATTATGCTCTACGAGTGTATCA
CAGGTGACTAACCACGCGTATAGACAAGCCATCATTCCCTCCCTCCCTCC
CTACTCCCCTTCCTCCTTCGCGTTGGGCGATCCCTTCCTAGTTCTTTACG
AAGTACTTCTCCCTCCCCCTCTTCTCCCTCCCTTCTGCTCCCCCTCCTTT
TCTCCCTTCTTCCAGGGTTGGACTTTGCGTTCCCTGATGTCAAAATCACT
GCCAACGACTCGCTTCGTGCGGCCTTGGGATCTCACTACAAGAAGCAGTA
GAGAGAGGGAGGGTGGGAAGTAAGAGGGCGTTGTCCTCGGATGTGGCAAA
CTTCCATAGAGAGATAGAGATTATGTGGATGCTGGCTGATTTGATTTAAC
TATCTTTGGCAGCGACGGCGGGAGTGCGGAGGGAAAGAGGGCATTAATGG
AGATTCTTTCGGTAAATTAGAAGAAGGAGAAGAAGTAGCAAGATTCACAA
TAACTGGCCTGTGCT

protein sequence of NO20G00700.1

>NO20G00700.1-protein ID=NO20G00700.1-protein|Name=NO20G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=348bp
MSTAAAPTSALISQAQTKTEAYLPRIDSQRAHTVGSTDLEGAFPYEKKYV
GKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSK
DLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGV
RQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKE
DWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTEDGQIIIVDEIHT
PDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAP
ADLVNELSRRYIMLYECITGLDFAFPDVKITANDSLRAALGSHYKKQ*

protein sequence of NO20G00700.2

>NO20G00700.2-protein ID=NO20G00700.2-protein|Name=NO20G00700.2|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MSTAAAPTSALISQAQTKTEAYLPRIDSQRAHTVGSTDLEGAFPYEKKYV
GKVRDVYTTTDSLVLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEQSK
DLVPNHILAVPHPNACVGKKCTVFPVEFVMRGYITGSTDTSLWTNYKRGV
RQYCGHALPDGLKKNQKLAANLLTPTTKDATHDELISADEILASGRMSKE
DWDLCASYSQALFAFGQRVAAERGLILVDTKYEFGKTEDGQIIIVDEIHT
PDSSRYWVAETYEARMTQGLEPENIDKEFLRLWFKDRCDPYKDATLPEAP
ADLVNELSRRYIMLYECITGD*

Synonyms

Publications