NO20G00660, NO20G00660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00660 vs. NCBI_GenBank
Match: EJK69567.1 (hypothetical protein THAOC_09161 [Thalassiosira oceanica]) HSP 1 Score: 250.0 bits (637), Expect = 1.100e-62 Identity = 138/283 (48.76%), Postives = 184/283 (65.02%), Query Frame = 0 Query: 34 YEDVEVLHKLADTLRRT--MKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPK-LPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRE 314 Y+D + L KL D LR T +R V + RV Y KG KL+ F+ PK LP +S +AIAI L +Y + KV LE++ ++++E Y+TWIYEG++ S+ MT +I GFL TCFPIWP+FLKV++WY+SV++L F+ + R L FLFVWV GYEFWFLPNLFDESL FV+SF P+YS EK+ GQ +YR GV VAF +F YWA +QP+EFD + Q F+ DLY G LLSD++Q DK++IDKP+ PS E+LL++ Sbjct: 10 YDDDKNLMKLCDFLRSTEGPPVREAVEMDKRVYYIKGEKLVNFMVEPKKGTKWPKELPKFSSRPEAIAICKELCNR-------QYMHRSEKVAKGELEVSRVRDFDESAYFTWIYEGNKKFSHLMTTGLIIGFLCCTCFPIWPNFLKVFVWYMSVSMLIFIFFLITARALLFLFVWVMGYEFWFLPNLFDESLGFVESFIPVYSCEKTKDGQLMYRVGVFVAFSSFCYWAVTQPSEFDGFVKGQGDFIKDLYAGTLLSDMSQKDKENIDKPK-MPSLEDLLKK 284
BLAST of NO20G00660 vs. NCBI_GenBank
Match: XP_002181372.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47295.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 249.6 bits (636), Expect = 1.500e-62 Identity = 131/272 (48.16%), Postives = 179/272 (65.81%), Query Frame = 0 Query: 34 YEDVEVLHKLADTLR--RTMKIRNGVLQETRVDYFKGTKLIKFLTTDLL-SKADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPR 303 YED++ L KL D LR +R +L E RV Y KG KL+ FL +K LP AS + AI + L K ++ ++ K L++ ++++E GY+TW+YEG +T+S+ M+ +I GFL CFPIWP FL+V++WY+SVTLL F+ + R LAFLF+W+ G+EFWFLPNLFDE+LSFVDSFKP+YS++ + PGQ YR GV VAF +F YWA +QP+EFD AQ F+ DLY G LLSD++Q DK++IDKP+ Sbjct: 10 YEDIDNLKKLCDFLRGKHGPPVREALLIEKRVHYMKGEKLVNFLVEPKKGTKWPTNLPKFASRSDAILVCKELCK-------QQFLLRSEKRGKGELDVARVRDFDEAGYFTWVYEGDKTMSHLMSAGLIVGFLFCVCFPIWPQFLRVFVWYLSVTLLLFIFILVTFRALAFLFIWIIGFEFWFLPNLFDETLSFVDSFKPVYSFDPAKPGQLPYRIGVAVAFGSFCYWAVTQPSEFDGFRAAQGDFLKDLYAGTLLSDMSQEDKENIDKPK 274
BLAST of NO20G00660 vs. NCBI_GenBank
Match: CBJ28614.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 248.8 bits (634), Expect = 2.600e-62 Identity = 135/287 (47.04%), Postives = 181/287 (63.07%), Query Frame = 0 Query: 34 YEDVEVLHKLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVK-----PRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRE 314 YE E L ++A L R M +R + + RV+YFKG KL+ FL T+ P + +E +AI + LL+ +YF + KVK R LE++ ++ GY+TWI+ GSQ LS+ T LII GFL ITCFPIWP LKVW+WY+SVTLL FL +R L F F W+ GYEFW LP LFDE+L+F +SF P++++EK GQG YR V +AF+ WAY+QPT+FD+ ++AQ FM DLY G LLSDV++ K DIDKP+ PS E++L+E Sbjct: 12 YETEEGLKEVAAFLRGRNGMPLRPAIEVDKRVEYFKGEKLVNFLVTN----TKKGRPAIKTEEEAIRVCKALLR-------HEYFHRSEKVKGGGAGERHLEVSGNNQFDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIXXXFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPVWTFEKGSSGQGYYRVVAVGGVIAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSEKSKQDIDKPKV-PSLEDILKE 286
BLAST of NO20G00660 vs. NCBI_GenBank
Match: GAX23625.1 (translocation protein SEC62 [Fistulifera solaris]) HSP 1 Score: 239.2 bits (609), Expect = 2.000e-59 Identity = 138/315 (43.81%), Postives = 191/315 (60.63%), Query Frame = 0 Query: 34 YEDVEVLHKLADTLR--RTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLS-KADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRESELDLAGAD---ALSDEERGDSVIDSLLGEDE 343 Y+D+E L KL D LR +R +L E RV Y KG KL+ F+ K KLP S AIA+ L K ++ ++ K L ++ + ++E GY+TW+YEG +T+S+ MT L+I GFL CFPIWP FL++++WY+SVT L F G + LR A FWFLPNLFDESL FVDSF P+YS+E + PGQ YR GV VAF +F +WA +QP+EFD + AQ F+ DLY G LLSD++QSDK++IDKP+ S E+LL+ E D+ + + +EE+ +D+L+G +E Sbjct: 18 YDDLENLKKLCDFLRSKNGPPVREALLMEKRVHYLKGEKLVNFMFEPKKGVKWPKKLPKFESRQDAIAVCKELCK-------HQFLLRSEKRGKGDLGVSRVREFDEAGYFTWLYEGDKTVSHVMTTLLIVGFLFCVCFPIWPAFLRLFVWYMSVTFLLFTFGLITLRGFAXXXXXXXXXXFWFLPNLFDESLGFVDSFSPVYSFESTKPGQLPYRIGVAVAFFSFCWWAITQPSEFDGFVAAQGDFLKDLYAGTLLSDMSQSDKENIDKPKV-QSLEDLLKSLEDDMENENFRKEVDEEEKXXXXLDNLVGTEE 324
BLAST of NO20G00660 vs. NCBI_GenBank
Match: GAX15107.1 (translocation protein SEC62 [Fistulifera solaris]) HSP 1 Score: 239.2 bits (609), Expect = 2.000e-59 Identity = 138/315 (43.81%), Postives = 191/315 (60.63%), Query Frame = 0 Query: 34 YEDVEVLHKLADTLR--RTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLS-KADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRESELDLAGAD---ALSDEERGDSVIDSLLGEDE 343 Y+D+E L KL D LR +R +L E RV Y KG KL+ F+ K KLP S AIA+ L K ++ ++ K L ++ + ++E GY+TW+YEG +T+S+ MT L+I GFL CFPIWP FL++++WY+SVT L F G + LR A FWFLPNLFDESL FVDSF P+YS+E + PGQ YR GV VAF +F +WA +QP+EFD + AQ F+ DLY G LLSD++QSDK++IDKP+ S E+LL+ E D+ + + +EE+ +D+L+G +E Sbjct: 18 YDDLENLKKLCDFLRSKNGPPVREALLMEKRVHYLKGEKLVNFMFEPKKGVKWPKKLPKFESRQDAIAVCKELCK-------HQFLLRSEKRGKGDLGVSRVREFDEAGYFTWLYEGDKTVSHVMTTLLIVGFLFCVCFPIWPAFLRLFVWYMSVTFLLFTFGLITLRGFAXXXXXXXXXXFWFLPNLFDESLGFVDSFSPVYSFESTKPGQLPYRIGVAVAFFSFCWWAITQPSEFDGFVAAQGDFLKDLYAGTLLSDMSQSDKENIDKPKV-QSLEDLLKSLEDDMENENFRKEVDEEEKXXXXLDNLVGTEE 324
BLAST of NO20G00660 vs. NCBI_GenBank
Match: XP_002290091.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91843.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 234.6 bits (597), Expect = 5.000e-58 Identity = 130/282 (46.10%), Postives = 175/282 (62.06%), Query Frame = 0 Query: 34 YEDVEVLHKLADTLRR--TMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPK-LPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLR 313 YED + L KL D LR +R + + RV Y KG KL+ FL PK LP S AIA+ L ++ + KV LE++ ++++E Y+TWIYEG++ S+ MT ++ GFL TCFPIWP+FLKV++WY+SV+LL F+ + R L FL VW+ GYE WFLPNLFDE L F +SF P S EK+ GQ +YRAGV VAF +F +WA +QP+EFD + Q F+ DLY G LLSD++Q DK++IDKP+ PS E+LL+ Sbjct: 8 YEDQKHLMKLCDFLRSGDGPAVREAIEMDKRVYYIKGEKLVNFLVEPKKGTKWPKDLPKFKSRPDAIAVCKDLCNR-------QFMHRSEKVGKGELEISRVRDFDESAYFTWIYEGNKKFSHLMTTCLVIGFLCCTCFPIWPNFLKVFVWYMSVSLLIFIFFLITFRALLFLMVWIIGYECWFLPNLFDEQLGFFESFVPFISIEKTKDGQLMYRAGVFVAFFSFCWWAVTQPSEFDGFVKGQGDFIKDLYAGTLLSDMSQKDKENIDKPK-MPSLEDLLK 281
BLAST of NO20G00660 vs. NCBI_GenBank
Match: OEU15162.1 (hypothetical protein FRACYDRAFT_208718 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 228.8 bits (582), Expect = 2.700e-56 Identity = 123/283 (43.46%), Postives = 175/283 (61.84%), Query Frame = 0 Query: 34 YEDVEVLHKLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPK-LPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRE 314 YED E L KL + L +R +L E RV Y KG KL+ FL PK LP S +AI + + K ++ ++C K L + ++++E GY+TW+Y+G +T+S+ MT ++ GF CF +WP FL+V++WY++V+LL F+ + R FL VW+ G++ WFLPNLFDE L F DSFKP+ S E++ PGQ YR GV VAF +F YWA +QP+EFD +TAQ F+ DLY G LLSD++Q DK++IDKP+ S E+LL++ Sbjct: 17 YEDTENLKKLCNFLLSGEGPSLREALLMEKRVLYLKGEKLVNFLFEPKKGTKWPKTLPRFKSRQEAIVVCKEMCKL-------QFILRCEKQGKGELGMMRNRDFDESGYFTWVYQGDKTVSHLMTAALVVGFFCCVCFQMWPTFLRVFVWYLAVSLLLFIFALVGSRAFLFLCVWIIGFDLWFLPNLFDEQLGFYDSFKPIISCERTRPGQFPYRIGVGVAFFSFCYWAITQPSEFDGFVTAQGDFVKDLYAGTLLSDMSQEDKENIDKPK-MQSLEDLLKD 291
BLAST of NO20G00660 vs. NCBI_GenBank
Match: XP_024575718.1 (non-selective cation channel-2 family [Plasmopara halstedii] >CEG39349.1 non-selective cation channel-2 family [Plasmopara halstedii]) HSP 1 Score: 219.9 bits (559), Expect = 1.300e-53 Identity = 121/287 (42.16%), Postives = 173/287 (60.28%), Query Frame = 0 Query: 34 YEDVEVLHKLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPKLPPVASEAQAIAIGNLLLKT-----KGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRE 314 +E + + K+AD L R+ + R+ V RV+YF+G +L FL K P + ++ A ++G LL+ DGQ K R L+ TPKQ++ GY+TW+YEGS+T+ N MT L+I GFL ITCFPIWP + KV LWY+SVT L F+ F+++R F +W+ GYE+W LPN+FD++LS DSF PLYS + + +YR VVAF F W ++QPT+FD + KQF D+Y G LLSD++Q D+D+ID + P ++LL+E Sbjct: 20 WETEKGIRKMADLLRGRKGLPSRHAVELGKRVEYFRGDRLATFLLAS--PKVKKYFPELKTKEDAYSVGRELLQNSYIHRSDRDGQNK----------RILKPTPKQDFSPEGYFTWMYEGSKTIRNIMTALLIIGFLIITCFPIWPQWAKVALWYMSVTFLIFVAIFVVVRLFIFFILWMIGYEYWLLPNIFDDNLSVADSFVPLYSLRTTDSSERIYRVIGVVAFACFCVWVWNQPTDFDEYMELTKQFTDDIYSGKLLSDMSQKDQDNIDAVKV-PDLQDLLKE 293
BLAST of NO20G00660 vs. NCBI_GenBank
Match: OQR90378.1 (Non-selective Cation Channel-2 (NSCC2) Family [Achlya hypogyna]) HSP 1 Score: 219.9 bits (559), Expect = 1.300e-53 Identity = 129/304 (42.43%), Postives = 184/304 (60.53%), Query Frame = 0 Query: 42 KLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFL-TTDLLSKADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNK--VKPRTLELTPKQNYEEL--GYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRESELDLAGADALSDEERGDSVIDSLL 339 K+AD L R M +R + RV++F+G KL KFL D SK P PV ++ +A+ +G LL+ FI ++ VK + L L P Q++E G+YTW+YEG +T NF+T +I GF + C+PIWP + K+ +WY+SVT L ++ F ++R +AF +W+ G EFWFLPN+FD++L VDSFKPLYS K+ P + YRA +VAF+AF W QPT+FD + KQF D+Y G LL D++Q DK+DIDK + P EEL+R+ D+ E+ DS+ DS + Sbjct: 37 KMADFLRGRNGMAVRQAIELGKRVEFFRGDKLGKFLIKNDSASKYCP--GPVTTKDEALEMGRLLV--------AHGFIHRSERDVKNKKL-LQPSQSHEFTADGFYTWMYEGPKTFRNFLTAALIVGFTGLVCYPIWPQWSKIGVWYLSVTFLIVIVVFCIVRLIAFFLLWLAGIEFWFLPNIFDDNLGVVDSFKPLYSLRKTDPSETKYRAIALVAFIAFCVWVAQQPTDFDEYMALTKQFTDDVYSGKLLDDMSQKDKEDIDKVKV-PDLEELMRDDATDMFA------EKDEDSIFDSFM 322
BLAST of NO20G00660 vs. NCBI_GenBank
Match: ETI49780.1 (hypothetical protein F443_06553 [Phytophthora parasitica P1569] >ETK89544.1 hypothetical protein L915_06422 [Phytophthora parasitica] >ETL42945.1 hypothetical protein L916_06368 [Phytophthora parasitica] >ETL96121.1 hypothetical protein L917_06236 [Phytophthora parasitica] >ETO78403.1 hypothetical protein F444_06619 [Phytophthora parasitica P1976] >ETP19417.1 hypothetical protein F441_06558 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 218.0 bits (554), Expect = 4.800e-53 Identity = 118/284 (41.55%), Postives = 174/284 (61.27%), Query Frame = 0 Query: 33 AYEDVEVLHKLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNK--VKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLR 313 ++E + + K+AD L R+ M R+ V RV+YF+G +L FL ++K P + ++ ++G+ L+ Q Y + + + L+ TPKQ++ GYYTW+YEGS+TL N MT L+I GFL ITCFPIWP + KV LWY+SVT L F+ F+++R F +W+ GYE+W LPN+FD++LS DSF PLYS + P + +YR ++AF F W +QPT+FD + KQF D+Y G LLSD++Q D+D+ID + P E+LL+ Sbjct: 19 SWETEKGIRKMADLLRGRKGMPSRHAVELGKRVEYFRGDRLATFLLASPMAK--KYFPDLKTKEDVNSVGHALV-------QNSYIHRSERDAKNKKILKPTPKQDFSPEGYYTWMYEGSKTLRNIMTALLIIGFLIITCFPIWPQWAKVALWYMSVTFLIFIAIFVVVRLFIFFILWMIGYEYWLLPNIFDDNLSVADSFVPLYSLRSTDPSERIYRVVGLIAFACFCVWVKNQPTDFDEYMELTKQFTDDIYSGKLLSDMSQKDQDNIDGVKV-PDLEDLLK 292 The following BLAST results are available for this feature:
BLAST of NO20G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00660 ID=NO20G00660|Name=NO20G00660|organism=Nannochloropsis oceanica|type=gene|length=2862bpback to top protein sequence of NO20G00660.1 >NO20G00660.1-protein ID=NO20G00660.1-protein|Name=NO20G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=367bpback to top Synonyms
Publications
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