NO20G00660, NO20G00660 (gene) Nannochloropsis oceanica

Overview
NameNO20G00660
Unique NameNO20G00660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2862
Alignment locationchr20:222413..225274 -

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Properties
Property NameValue
DescriptionTranslocation protein SEC62
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:222413..225274 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0030176integral component of endoplasmic reticulum membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR004728Sec62
Homology
BLAST of NO20G00660 vs. NCBI_GenBank
Match: EJK69567.1 (hypothetical protein THAOC_09161 [Thalassiosira oceanica])

HSP 1 Score: 250.0 bits (637), Expect = 1.100e-62
Identity = 138/283 (48.76%), Postives = 184/283 (65.02%), Query Frame = 0
Query:   34 YEDVEVLHKLADTLRRT--MKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPK-LPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRE 314
            Y+D + L KL D LR T    +R  V  + RV Y KG KL+ F+         PK LP  +S  +AIAI   L          +Y  +  KV    LE++  ++++E  Y+TWIYEG++  S+ MT  +I GFL  TCFPIWP+FLKV++WY+SV++L F+   +  R L FLFVWV GYEFWFLPNLFDESL FV+SF P+YS EK+  GQ +YR GV VAF +F YWA +QP+EFD  +  Q  F+ DLY G LLSD++Q DK++IDKP+  PS E+LL++
Sbjct:   10 YDDDKNLMKLCDFLRSTEGPPVREAVEMDKRVYYIKGEKLVNFMVEPKKGTKWPKELPKFSSRPEAIAICKELCNR-------QYMHRSEKVAKGELEVSRVRDFDESAYFTWIYEGNKKFSHLMTTGLIIGFLCCTCFPIWPNFLKVFVWYMSVSMLIFIFFLITARALLFLFVWVMGYEFWFLPNLFDESLGFVESFIPVYSCEKTKDGQLMYRVGVFVAFSSFCYWAVTQPSEFDGFVKGQGDFIKDLYAGTLLSDMSQKDKENIDKPK-MPSLEDLLKK 284          
BLAST of NO20G00660 vs. NCBI_GenBank
Match: XP_002181372.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47295.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 249.6 bits (636), Expect = 1.500e-62
Identity = 131/272 (48.16%), Postives = 179/272 (65.81%), Query Frame = 0
Query:   34 YEDVEVLHKLADTLR--RTMKIRNGVLQETRVDYFKGTKLIKFLTTDLL-SKADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPR 303
            YED++ L KL D LR      +R  +L E RV Y KG KL+ FL      +K    LP  AS + AI +   L K        ++ ++  K     L++   ++++E GY+TW+YEG +T+S+ M+  +I GFL   CFPIWP FL+V++WY+SVTLL F+   +  R LAFLF+W+ G+EFWFLPNLFDE+LSFVDSFKP+YS++ + PGQ  YR GV VAF +F YWA +QP+EFD    AQ  F+ DLY G LLSD++Q DK++IDKP+
Sbjct:   10 YEDIDNLKKLCDFLRGKHGPPVREALLIEKRVHYMKGEKLVNFLVEPKKGTKWPTNLPKFASRSDAILVCKELCK-------QQFLLRSEKRGKGELDVARVRDFDEAGYFTWVYEGDKTMSHLMSAGLIVGFLFCVCFPIWPQFLRVFVWYLSVTLLLFIFILVTFRALAFLFIWIIGFEFWFLPNLFDETLSFVDSFKPVYSFDPAKPGQLPYRIGVAVAFGSFCYWAVTQPSEFDGFRAAQGDFLKDLYAGTLLSDMSQEDKENIDKPK 274          
BLAST of NO20G00660 vs. NCBI_GenBank
Match: CBJ28614.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 248.8 bits (634), Expect = 2.600e-62
Identity = 135/287 (47.04%), Postives = 181/287 (63.07%), Query Frame = 0
Query:   34 YEDVEVLHKLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVK-----PRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRE 314
            YE  E L ++A  L  R  M +R  +  + RV+YFKG KL+ FL T+         P + +E +AI +   LL+        +YF +  KVK      R LE++    ++  GY+TWI+ GSQ LS+  T LII GFL ITCFPIWP  LKVW+WY+SVTLL     FL +R L F F W+ GYEFW LP LFDE+L+F +SF P++++EK   GQG YR   V   +AF+ WAY+QPT+FD+ ++AQ  FM DLY G LLSDV++  K DIDKP+  PS E++L+E
Sbjct:   12 YETEEGLKEVAAFLRGRNGMPLRPAIEVDKRVEYFKGEKLVNFLVTN----TKKGRPAIKTEEEAIRVCKALLR-------HEYFHRSEKVKGGGAGERHLEVSGNNQFDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIXXXFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPVWTFEKGSSGQGYYRVVAVGGVIAFVIWAYNQPTDFDTFISAQSDFMSDLYAGKLLSDVSEKSKQDIDKPKV-PSLEDILKE 286          
BLAST of NO20G00660 vs. NCBI_GenBank
Match: GAX23625.1 (translocation protein SEC62 [Fistulifera solaris])

HSP 1 Score: 239.2 bits (609), Expect = 2.000e-59
Identity = 138/315 (43.81%), Postives = 191/315 (60.63%), Query Frame = 0
Query:   34 YEDVEVLHKLADTLR--RTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLS-KADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRESELDLAGAD---ALSDEERGDSVIDSLLGEDE 343
            Y+D+E L KL D LR      +R  +L E RV Y KG KL+ F+       K   KLP   S   AIA+   L K        ++ ++  K     L ++  + ++E GY+TW+YEG +T+S+ MT L+I GFL   CFPIWP FL++++WY+SVT L F  G + LR  A          FWFLPNLFDESL FVDSF P+YS+E + PGQ  YR GV VAF +F +WA +QP+EFD  + AQ  F+ DLY G LLSD++QSDK++IDKP+   S E+LL+  E D+   +    + +EE+    +D+L+G +E
Sbjct:   18 YDDLENLKKLCDFLRSKNGPPVREALLMEKRVHYLKGEKLVNFMFEPKKGVKWPKKLPKFESRQDAIAVCKELCK-------HQFLLRSEKRGKGDLGVSRVREFDEAGYFTWLYEGDKTVSHVMTTLLIVGFLFCVCFPIWPAFLRLFVWYMSVTFLLFTFGLITLRGFAXXXXXXXXXXFWFLPNLFDESLGFVDSFSPVYSFESTKPGQLPYRIGVAVAFFSFCWWAITQPSEFDGFVAAQGDFLKDLYAGTLLSDMSQSDKENIDKPKV-QSLEDLLKSLEDDMENENFRKEVDEEEKXXXXLDNLVGTEE 324          
BLAST of NO20G00660 vs. NCBI_GenBank
Match: GAX15107.1 (translocation protein SEC62 [Fistulifera solaris])

HSP 1 Score: 239.2 bits (609), Expect = 2.000e-59
Identity = 138/315 (43.81%), Postives = 191/315 (60.63%), Query Frame = 0
Query:   34 YEDVEVLHKLADTLR--RTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLS-KADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRESELDLAGAD---ALSDEERGDSVIDSLLGEDE 343
            Y+D+E L KL D LR      +R  +L E RV Y KG KL+ F+       K   KLP   S   AIA+   L K        ++ ++  K     L ++  + ++E GY+TW+YEG +T+S+ MT L+I GFL   CFPIWP FL++++WY+SVT L F  G + LR  A          FWFLPNLFDESL FVDSF P+YS+E + PGQ  YR GV VAF +F +WA +QP+EFD  + AQ  F+ DLY G LLSD++QSDK++IDKP+   S E+LL+  E D+   +    + +EE+    +D+L+G +E
Sbjct:   18 YDDLENLKKLCDFLRSKNGPPVREALLMEKRVHYLKGEKLVNFMFEPKKGVKWPKKLPKFESRQDAIAVCKELCK-------HQFLLRSEKRGKGDLGVSRVREFDEAGYFTWLYEGDKTVSHVMTTLLIVGFLFCVCFPIWPAFLRLFVWYMSVTFLLFTFGLITLRGFAXXXXXXXXXXFWFLPNLFDESLGFVDSFSPVYSFESTKPGQLPYRIGVAVAFFSFCWWAITQPSEFDGFVAAQGDFLKDLYAGTLLSDMSQSDKENIDKPKV-QSLEDLLKSLEDDMENENFRKEVDEEEKXXXXLDNLVGTEE 324          
BLAST of NO20G00660 vs. NCBI_GenBank
Match: XP_002290091.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91843.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 234.6 bits (597), Expect = 5.000e-58
Identity = 130/282 (46.10%), Postives = 175/282 (62.06%), Query Frame = 0
Query:   34 YEDVEVLHKLADTLRR--TMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPK-LPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLR 313
            YED + L KL D LR      +R  +  + RV Y KG KL+ FL         PK LP   S   AIA+   L          ++  +  KV    LE++  ++++E  Y+TWIYEG++  S+ MT  ++ GFL  TCFPIWP+FLKV++WY+SV+LL F+   +  R L FL VW+ GYE WFLPNLFDE L F +SF P  S EK+  GQ +YRAGV VAF +F +WA +QP+EFD  +  Q  F+ DLY G LLSD++Q DK++IDKP+  PS E+LL+
Sbjct:    8 YEDQKHLMKLCDFLRSGDGPAVREAIEMDKRVYYIKGEKLVNFLVEPKKGTKWPKDLPKFKSRPDAIAVCKDLCNR-------QFMHRSEKVGKGELEISRVRDFDESAYFTWIYEGNKKFSHLMTTCLVIGFLCCTCFPIWPNFLKVFVWYMSVSLLIFIFFLITFRALLFLMVWIIGYECWFLPNLFDEQLGFFESFVPFISIEKTKDGQLMYRAGVFVAFFSFCWWAVTQPSEFDGFVKGQGDFIKDLYAGTLLSDMSQKDKENIDKPK-MPSLEDLLK 281          
BLAST of NO20G00660 vs. NCBI_GenBank
Match: OEU15162.1 (hypothetical protein FRACYDRAFT_208718 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 228.8 bits (582), Expect = 2.700e-56
Identity = 123/283 (43.46%), Postives = 175/283 (61.84%), Query Frame = 0
Query:   34 YEDVEVLHKLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPK-LPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRE 314
            YED E L KL + L       +R  +L E RV Y KG KL+ FL         PK LP   S  +AI +   + K        ++ ++C K     L +   ++++E GY+TW+Y+G +T+S+ MT  ++ GF    CF +WP FL+V++WY++V+LL F+   +  R   FL VW+ G++ WFLPNLFDE L F DSFKP+ S E++ PGQ  YR GV VAF +F YWA +QP+EFD  +TAQ  F+ DLY G LLSD++Q DK++IDKP+   S E+LL++
Sbjct:   17 YEDTENLKKLCNFLLSGEGPSLREALLMEKRVLYLKGEKLVNFLFEPKKGTKWPKTLPRFKSRQEAIVVCKEMCKL-------QFILRCEKQGKGELGMMRNRDFDESGYFTWVYQGDKTVSHLMTAALVVGFFCCVCFQMWPTFLRVFVWYLAVSLLLFIFALVGSRAFLFLCVWIIGFDLWFLPNLFDEQLGFYDSFKPIISCERTRPGQFPYRIGVGVAFFSFCYWAITQPSEFDGFVTAQGDFVKDLYAGTLLSDMSQEDKENIDKPK-MQSLEDLLKD 291          
BLAST of NO20G00660 vs. NCBI_GenBank
Match: XP_024575718.1 (non-selective cation channel-2 family [Plasmopara halstedii] >CEG39349.1 non-selective cation channel-2 family [Plasmopara halstedii])

HSP 1 Score: 219.9 bits (559), Expect = 1.300e-53
Identity = 121/287 (42.16%), Postives = 173/287 (60.28%), Query Frame = 0
Query:   34 YEDVEVLHKLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPKLPPVASEAQAIAIGNLLLKT-----KGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRE 314
            +E  + + K+AD L  R+ +  R+ V    RV+YF+G +L  FL      K     P + ++  A ++G  LL+         DGQ K          R L+ TPKQ++   GY+TW+YEGS+T+ N MT L+I GFL ITCFPIWP + KV LWY+SVT L F+  F+++R   F  +W+ GYE+W LPN+FD++LS  DSF PLYS   +   + +YR   VVAF  F  W ++QPT+FD  +   KQF  D+Y G LLSD++Q D+D+ID  +  P  ++LL+E
Sbjct:   20 WETEKGIRKMADLLRGRKGLPSRHAVELGKRVEYFRGDRLATFLLAS--PKVKKYFPELKTKEDAYSVGRELLQNSYIHRSDRDGQNK----------RILKPTPKQDFSPEGYFTWMYEGSKTIRNIMTALLIIGFLIITCFPIWPQWAKVALWYMSVTFLIFVAIFVVVRLFIFFILWMIGYEYWLLPNIFDDNLSVADSFVPLYSLRTTDSSERIYRVIGVVAFACFCVWVWNQPTDFDEYMELTKQFTDDIYSGKLLSDMSQKDQDNIDAVKV-PDLQDLLKE 293          
BLAST of NO20G00660 vs. NCBI_GenBank
Match: OQR90378.1 (Non-selective Cation Channel-2 (NSCC2) Family [Achlya hypogyna])

HSP 1 Score: 219.9 bits (559), Expect = 1.300e-53
Identity = 129/304 (42.43%), Postives = 184/304 (60.53%), Query Frame = 0
Query:   42 KLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFL-TTDLLSKADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNK--VKPRTLELTPKQNYEEL--GYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLRESELDLAGADALSDEERGDSVIDSLL 339
            K+AD L  R  M +R  +    RV++F+G KL KFL   D  SK  P   PV ++ +A+ +G LL+           FI  ++  VK + L L P Q++E    G+YTW+YEG +T  NF+T  +I GF  + C+PIWP + K+ +WY+SVT L  ++ F ++R +AF  +W+ G EFWFLPN+FD++L  VDSFKPLYS  K+ P +  YRA  +VAF+AF  W   QPT+FD  +   KQF  D+Y G LL D++Q DK+DIDK +  P  EEL+R+   D+        E+  DS+ DS +
Sbjct:   37 KMADFLRGRNGMAVRQAIELGKRVEFFRGDKLGKFLIKNDSASKYCP--GPVTTKDEALEMGRLLV--------AHGFIHRSERDVKNKKL-LQPSQSHEFTADGFYTWMYEGPKTFRNFLTAALIVGFTGLVCYPIWPQWSKIGVWYLSVTFLIVIVVFCIVRLIAFFLLWLAGIEFWFLPNIFDDNLGVVDSFKPLYSLRKTDPSETKYRAIALVAFIAFCVWVAQQPTDFDEYMALTKQFTDDVYSGKLLDDMSQKDKEDIDKVKV-PDLEELMRDDATDMFA------EKDEDSIFDSFM 322          
BLAST of NO20G00660 vs. NCBI_GenBank
Match: ETI49780.1 (hypothetical protein F443_06553 [Phytophthora parasitica P1569] >ETK89544.1 hypothetical protein L915_06422 [Phytophthora parasitica] >ETL42945.1 hypothetical protein L916_06368 [Phytophthora parasitica] >ETL96121.1 hypothetical protein L917_06236 [Phytophthora parasitica] >ETO78403.1 hypothetical protein F444_06619 [Phytophthora parasitica P1976] >ETP19417.1 hypothetical protein F441_06558 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 218.0 bits (554), Expect = 4.800e-53
Identity = 118/284 (41.55%), Postives = 174/284 (61.27%), Query Frame = 0
Query:   33 AYEDVEVLHKLADTL--RRTMKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPKLPPVASEAQAIAIGNLLLKTKGEDGQPKYFIQCNK--VKPRTLELTPKQNYEELGYYTWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVVVAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDKPRAYPSYEELLR 313
            ++E  + + K+AD L  R+ M  R+ V    RV+YF+G +L  FL    ++K     P + ++    ++G+ L+       Q  Y  +  +     + L+ TPKQ++   GYYTW+YEGS+TL N MT L+I GFL ITCFPIWP + KV LWY+SVT L F+  F+++R   F  +W+ GYE+W LPN+FD++LS  DSF PLYS   + P + +YR   ++AF  F  W  +QPT+FD  +   KQF  D+Y G LLSD++Q D+D+ID  +  P  E+LL+
Sbjct:   19 SWETEKGIRKMADLLRGRKGMPSRHAVELGKRVEYFRGDRLATFLLASPMAK--KYFPDLKTKEDVNSVGHALV-------QNSYIHRSERDAKNKKILKPTPKQDFSPEGYYTWMYEGSKTLRNIMTALLIIGFLIITCFPIWPQWAKVALWYMSVTFLIFIAIFVVVRLFIFFILWMIGYEYWLLPNIFDDNLSVADSFVPLYSLRSTDPSERIYRVVGLIAFACFCVWVKNQPTDFDEYMELTKQFTDDIYSGKLLSDMSQKDQDNIDGVKV-PDLEDLLK 292          
The following BLAST results are available for this feature:
BLAST of NO20G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EJK69567.11.100e-6248.76hypothetical protein THAOC_09161 [Thalassiosira oc... [more]
XP_002181372.11.500e-6248.16predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBJ28614.12.600e-6247.04conserved unknown protein [Ectocarpus siliculosus][more]
GAX23625.12.000e-5943.81translocation protein SEC62 [Fistulifera solaris][more]
GAX15107.12.000e-5943.81translocation protein SEC62 [Fistulifera solaris][more]
XP_002290091.15.000e-5846.10predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU15162.12.700e-5643.46hypothetical protein FRACYDRAFT_208718 [Fragilario... [more]
XP_024575718.11.300e-5342.16non-selective cation channel-2 family [Plasmopara ... [more]
OQR90378.11.300e-5342.43Non-selective Cation Channel-2 (NSCC2) Family [Ach... [more]
ETI49780.14.800e-5341.55hypothetical protein F443_06553 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL024nonsL024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR068ngnoR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002572NSK002572Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00660.1NO20G00660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100645g3gene8255Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00660.1NO20G00660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00660 ID=NO20G00660|Name=NO20G00660|organism=Nannochloropsis oceanica|type=gene|length=2862bp
ATGAGCACCACGGACGAGGCCAAGGCCAACCCCCCTGCTGATGCTGCCGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGATGGAGCTGCTGGGGCCT
ATGAGGACGTGGAGGTCCTGCACAAGCTTGCGGACACATTGCGGCGCACG
ATGAAGATCCGGAATGGGGTGTTGCAGGAGACTCGTGTGGATTACTTCAA
AGgtaaggagaaggggggagggagggagggggaggaaggagggcagggag
gaaggggagcgagggagggaggagggagtccatcgtgtgtttatttctca
tagccaactggtttgggatttaatgtactgttgttgctcttgttgttgtt
gttgttgttgttgttgctgttgtttgtgttgtcgttgttggttgtattgt
tcttcttgttgtcactctcgttgtggttgtggttgaggttttctttgccg
atgtgcgtcttcttcatctcatcctccactccctccctccctccctttct
agGCACGAAGCTCATCAAGTTCCTAACCACCGACCTCCTGAGCAAGGCCG
ACCCCAAGCTGCCGCCCGTCGCGAGCGAGGCCCAGGCCATTGCCATCGGC
AACCTGCTGTTGAAGACCAAGGGgtagggagggaaggagggagggaggga
gggatgaaaggaataggggagtttgatgtgggttgaggaagagcgcgcaa
cgatgatgccctcgaatgcttccaagcacatcacgagtgagacttttgtc
ctcatggagtttaacaagtcacggaaacggaggcaattcatgtataatta
ttccacgccctcaatccctccctccctccctcgccctcccacagCGAGGA
CGGACAGCCCAAGTACTTTATTCAGTGTAACAAGGTCAAGCCCCGCACTC
TTGAGgtaggcccctagggagggagggagagaggcagagaaggagggagg
gaagcagagaaggagagagagagggatggagggaaggctgtggagaaagg
aagcagcagaaggagaagtggaaggtttcatgtcatggcatcatctaacc
accttttcatcgcttctaccttcccttcctccctgcctcagCTCACCCCG
AAGCAGAACTACGAGGAGTTGGGATACTACACTTGGATCTACGAAGGGTC
GCAGACGCTGTCGAACTTTATGACATTCTTGATCATCGCCGGATTCTTGG
CAATTACGTGCTTCCCCATCTGGCCACACTTCCTCAAGgtaagtacgccc
tccctccctcccacacttcaggtgtcatggcatgccttcatgatgcccgg
tctcccctccccccctccctcctcccctccctccccccttccccctcagG
TATGGCTGTGGTACGTCTCCGTCACCCTACTCTCCTTCATGCTCGGCTTC
CTCCTCCTCCGCTTCCTGGCCTTCCTCTTCGTGTGGGTCACCGGCTACGA
ATTTTGGTTCCTGCCCAACCTCTTCGACGAGTCCCTCTCCTTCGTCGACT
CCTTCAAGCCCgtacgtacccccctccctccctccctcgtcgtccgggtc
accatcggccaccagtcccttcgttcgtgccccctcctccttccctcccc
cctctttctcaccccccttccctccctccttcccctcctccctcccttcc
tccctcccttcctccctccccagCTCTACTCGTGGGAAAAATCACCCCCC
GGCCAAGGGCTCTATCGTGCCGGTGTCGTCGTCGCCTTCGTCGCCTTTTT
ATATTGGGCTTACTCCCAACCCACCGAGTTCGACTCCCTCCTCACGGCTC
AAAAGCAGTTTATGCACGACCTGTACGAAGGCAATTTGCTCTCGGACGTG
GCGCAGgtaggggcggagggagggagggagggagggaaggagtggtgctt
gcggagagtcttggggaatgagggaggaaaggagggagtgaaggatggga
aggaggataatgttcgcaggaggtgcttgtggagagtccagggatggctg
ccaataatctattttcaaagacatacaaagacgcatcgtgtttctcactt
ctaacgattcctcctcccttcccttccctccctccctcccctccctccct
cccacagTCGGACAAGGACGACATCGACAAGCCTCGGGCCTACCCCTCGT
ACGAAGAGCTCTTGCGGGAAAGCGAGCTGGATCTAGgtacgcctgtcatc
cctccctccctccttattttcgttatcctcctgtcaaatctgtcgacccc
aattttttacatacaaattatccatatcctccctcctctttgccctccct
ccacttacctcttttcgtctcccttctcttttttcaattttcaccgatac
caaccatcatcatcattattcctccttgttcgtctctttccctccattct
catgtcctccagCGGGCGCGGACGCTTTGAGCGATGAGGAACGAGGGGAC
TCGGTAATTGACTCTCTGTTGGGGGAAGACGAGGCGGAGGACGCGGCGGA
CGACGTACAAGATGCAGCGGCAAAAGAAGGGGAGGGAGCCAAGAAGGAGG
ATTTGTAGAGGCATCACAGATGGGTATGGGAAAGATCACGGGTAGCGGGA
AGGGGAGAGGAAAAGCCGAGGAGGGAGGGAGAGAAGAAATGAGGGAGGGA
GGAAATATGGATAAAGCAAGCCACCCCCCAAAAAGCGCAATTCACGAATG
GTCCAAAGAAACAAGAGAAACCACGCAGTGGGATGAGTATGGGTTGGGAA
GGAACAGTGGAGTTTATTGTTGCTTTACGTCGGTTTGTTTTGGTGGAGGG
AGTGAAAGGGGAGGGGAAGAGGGCGGAAATTGTGTGTGAAGGGGAGCAAC
CATGGTTATAAA
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protein sequence of NO20G00660.1

>NO20G00660.1-protein ID=NO20G00660.1-protein|Name=NO20G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=367bp
MSTTDEAKANPPADAAAAAAAAAAAAGDGAAGAYEDVEVLHKLADTLRRT
MKIRNGVLQETRVDYFKGTKLIKFLTTDLLSKADPKLPPVASEAQAIAIG
NLLLKTKGEDGQPKYFIQCNKVKPRTLELTPKQNYEELGYYTWIYEGSQT
LSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFL
AFLFVWVTGYEFWFLPNLFDESLSFVDSFKPLYSWEKSPPGQGLYRAGVV
VAFVAFLYWAYSQPTEFDSLLTAQKQFMHDLYEGNLLSDVAQSDKDDIDK
PRAYPSYEELLRESELDLAGADALSDEERGDSVIDSLLGEDEAEDAADDV
QDAAAKEGEGAKKEDL*
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Synonyms
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