NO20G00640, NO20G00640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00640 vs. NCBI_GenBank
Match: XP_005854534.1 (hypothetical protein NGA_2019500, partial [Nannochloropsis gaditana CCMP526] >EKU21824.1 hypothetical protein NGA_2019500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 267.3 bits (682), Expect = 1.200e-67 Identity = 138/224 (61.61%), Postives = 170/224 (75.89%), Query Frame = 0 Query: 28 VEGLRPRQDPFLAELEAKYAAECDKARRRAERFGVEYKEPDKAQLFAAETKRAQRMRPDEGFYVSMDLQSQEEKAKQAARGQRWGNSEAYAKSLEDAEEVTKKAERAARFGLPVQEAVGGVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGGEREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLG 252 V+ LRPRQDPF A LEA Y AEC+KAR+RAERFGVEYK PDKA LFAAETKRAQRMR DEGFYV++DL S+ E+AKQ ARG+RWG+SE Y K+ +DAEE KKAERAARF LP +AVGG+LRKMGLNP+++Y+AD R DPGR+ + + DK G ++ G++ V PP E +E +KVH+HALD+E F+A+RSGDVLR+F +FFPR W G Sbjct: 1 VDSLRPRQDPFQAALEANYTAECEKARKRAERFGVEYKAPDKAVLFAAETKRAQRMRQDEGFYVTIDLDSEAERAKQQARGERWGHSETYVKAKDDAEEAAKKAERAARFNLPTAQAVGGILRKMGLNPRYMYLADATRRDPGRQASSTSGQG-GDKTLPGFMGDKDGAGLSLSKGLVSPPEERLEETKVHMHALDKECFRAMRSGDVLRFFNEFFPRCRCWEG 223
BLAST of NO20G00640 vs. NCBI_GenBank
Match: GAX21452.1 (hypothetical protein FisN_10Hh031 [Fistulifera solaris]) HSP 1 Score: 106.7 bits (265), Expect = 2.600e-19 Identity = 104/363 (28.65%), Postives = 152/363 (41.87%), Query Frame = 0 Query: 45 KYAAECDKARRRAERFGVEYKEPDKAQLFAAETKRAQRMRPDEGFYVSMDLQSQEEKAKQAARGQRWGNSEAYAKSLEDAEEVTKKAERAARFGLPVQEA------VGGVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGGEREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLGDCSANVIFDDAAAAKRALEAVSAPLP-PLSDVMVGPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAPRPGEGPYVSKWKEXXXXXXXXXXXXXXXXXWVDLPMCGWRLGKRRIMKRQGGREEGRQVAVRLLLRLATTRDVLKEREK 401 +Y +C KAR RA++FG+ YKEP +R R P GF+ +DL EKAKQ AR +R+G A +E +++VT + + +P+++A VGG +++ P V P +QP+ EG RE+ VEPP + K+H+ ++D F+ IR+ D++ +F+ + P YVEWLGD S NV+F D +A RALE +S +P P D + YV + DL GWRL K + K R R RLL+R AT+ D+L ER K Sbjct: 278 EYEEQCQKARARADKFGLPYKEP--PSFLPWSQQRRLRANPKAGFHTGLDLSDPNEKAKQDARRKRFG---AALDEMEKSDDVTSEKK-----AIPIEQAWDKENFVGG--QRLDPPPTLWKVPRP----DTSAIQPS----------EGFIREK-----------VEPP--ILTPEKIHIFSIDWAAFKQIRTDDIMAFFSIYGPSYVEWLGDLSCNVLFQDRYSAARALENISQEIPSPPPDTLEASRR---------------------------------------YVHAISDEDMVDPP-----------TDLGAMGWRLCKTMLRKISTDRHGQRGTTARLLMRPATSLDILLERPK 551
BLAST of NO20G00640 vs. NCBI_GenBank
Match: GAX17184.1 (hypothetical protein FisN_10Lh031 [Fistulifera solaris]) HSP 1 Score: 104.0 bits (258), Expect = 1.700e-18 Identity = 98/358 (27.37%), Postives = 147/358 (41.06%), Query Frame = 0 Query: 45 KYAAECDKARRRAERFGVEYKEPDKAQLFAAETKRAQRMRPDEGFYVSMDLQSQEEKAKQAARGQRWGNSEAYAKSLEDAEEVTKKAERAARFGLPVQEAVGGVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGG-EREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLGDCSANVIFDDAAAAKRALEAVSAPLP-PLSDVMVGPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAPRPGEGPYVSKWKEXXXXXXXXXXXXXXXXXWVDLPMCGWRLGKRRIMKRQGGREEGRQVAVRLLLRLATTRDVLKEREK 401 +Y +C KAR RAE+FG+ YKEP +R R P GF+ +DL + +EKAKQ AR +R+G + +E +++VT + + +P+++A D G+++ P + EG + E VEPP + K+H+ ++D F+ IR+ D++ +F+ + P YVEWLGD S NV+F D +A RALE +S +P P D + YV + DL GWRL K + K R R RLL+R AT+ D+L ER K Sbjct: 279 EYEEQCQKARARAEKFGLPYKEP--PSFLPWSQQRRLRANPKAGFHTGLDLSNPDEKAKQDARRKRFGTA---LDEMEKSDDVTLEKKT-----IPIEQA-----------------WDKENFARGQRLDPPPTLWKVPRPDTSAIHPSEG-----FIREKVEPP--RLTPEKIHIFSIDWAAFKQIRTDDIMAFFSIYGPSYVEWLGDLSCNVLFQDRFSAARALENLSQEIPSPPPDTLEASRR---------------------------------------YVHTMSDEDMVDPP-----------TDLGAMGWRLCKSMLRKISTDRHGQRGTTARLLMRPATSLDILLERPK 552
BLAST of NO20G00640 vs. NCBI_GenBank
Match: XP_002185857.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65327.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 99.8 bits (247), Expect = 3.200e-17 Identity = 79/264 (29.92%), Postives = 121/264 (45.83%), Query Frame = 0 Query: 18 SKETLLAEIGVEGLRPRQDPFLAELEAKYAAECDKARRRAERFGVEYKEPDKAQLFAAETKRAQRMRPDEGFYVSMDLQSQEEKAKQAARGQRWGN--SEAYAKSLEDAEEVTKKAERAARFGLPVQEAVG--GVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGGEREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLGDCSANVIFDDAAAAKRALEAVSAPLP 278 +K+ + ++G R D L +Y EC KAR RA +FG+ Y+EP R R P +GF MDL EKAKQ AR +R+G E S E++ E LP+ +A G +R +P L+ +P D + + E ++ P + ++K+H+ ++D F+ IR+ D++ +F+ + P Y+EWLGD S NV F+DA +A RALE +S LP Sbjct: 243 AKDVSMIQLG----RDEMDAETKALMDEYQQECTKARARASKFGIPYQEPAPDAFVPWSQARRLRANPKQGFITGMDLSDPVEKAKQEARQKRFGTVAGEVSTGSATGEGEISSIIETQV---LPIIQAWDNEGFVRSQRTDPPTLFWKNPP----------------PDSSFDEPKNEFS----------MDEDPVTLISAKIHIFSIDWAAFKQIRTNDIMAHFSIYGPSYIEWLGDLSCNVCFEDAYSATRALENMSQELP 473
BLAST of NO20G00640 vs. NCBI_GenBank
Match: XP_012197534.1 (hypothetical protein SPRG_03564 [Saprolegnia parasitica CBS 223.65] >KDO31644.1 hypothetical protein SPRG_03564 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 90.9 bits (224), Expect = 1.500e-14 Identity = 73/261 (27.97%), Postives = 117/261 (44.83%), Query Frame = 0 Query: 36 DPFLAELEAKYAAECDKARRRAERFGVEYKEPDKAQLFAAETKRAQRMR---PDEGFYVSMDLQSQEEKAKQAARGQRWGNSE-----AYAKSLED----------AEEVTKKAERAARFGLPVQEAVGGVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGGEREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLGDCSANVIFDDAAAAKRALEAVSAPLPP 279 D E +Y A C+ A++RA+RF EYK+PD Q ++ R + ++GF D+ S EE AK+ AR R+ +E A+ + + +EE ++A RAA+FG+ Q G ++ +PK L ER + N + E +H+++LD + F ++R+ D+L YFT + P YVEW+ D S ++F DA RAL ++SA + P Sbjct: 246 DLLTPEQRTQYVAGCEGAKKRAQRFNSEYKQPDVKQFLDSKIVRMMQRSGAVTEKGFTTGFDVMSAEEVAKREARRNRFNVAEYAIEGGVAREISEGLTEDELAKRSEEAARRAGRAAKFGIETQ----GNMQLHAASPKVL-----------------------------AERVDMNTAL------------EARDDAIHMYSLD-DAFTSVRTRDILAYFTGYGPSYVEWINDSSCTIVFHDAFTVSRALLSLSADIAP 460
BLAST of NO20G00640 vs. NCBI_GenBank
Match: OQR93409.1 (hypothetical protein ACHHYP_02539 [Achlya hypogyna]) HSP 1 Score: 89.7 bits (221), Expect = 3.300e-14 Identity = 74/261 (28.35%), Postives = 117/261 (44.83%), Query Frame = 0 Query: 36 DPFLAELEAKYAAECDKARRRAERFGVEYKEPDKAQLFAAETKRAQRMR---PDEGFYVSMDLQSQEEKAKQAARGQRW---------GNSEAYAKSLEDA------EEVTKKAERAARFGLPVQEAVGGVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGGEREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLGDCSANVIFDDAAAAKRALEAVSAPLPP 279 D E A Y C+ A++RA RFG EYK PD Q ++ R + ++GF D+ S +E AK+ AR R+ G + ++ L +A EE+ ++A RAA+FG+ + G+ + PK L A+ DP ++ +A VH+++LD + F ++R+ D+L YFT + P YVEW+ D S V+F DA RAL ++S+ + P Sbjct: 233 DLLTPEQRAAYVTGCEAAKKRAARFGGEYKPPDVKQFLDSKVVRMMQRSGAVTEKGFTTGFDVMSADEVAKREARRARFNVPDYPIEGGVAREISEGLTEAELARRQEELARRASRAAKFGIEEASTITGL---VAATPKVL--AERVDLDPTLDLRDDA---------------------------------------VHMYSLD-DAFTSVRTRDILAYFTGYGPSYVEWINDSSCTVVFHDAHTVARALLSLSSEIAP 448
BLAST of NO20G00640 vs. NCBI_GenBank
Match: XP_008609331.1 (hypothetical protein SDRG_05395 [Saprolegnia diclina VS20] >EQC37169.1 hypothetical protein SDRG_05395 [Saprolegnia diclina VS20]) HSP 1 Score: 87.0 bits (214), Expect = 2.100e-13 Identity = 73/261 (27.97%), Postives = 116/261 (44.44%), Query Frame = 0 Query: 36 DPFLAELEAKYAAECDKARRRAERFGVEYKEPDKAQLFAAETKRAQRMR---PDEGFYVSMDLQSQEEKAKQAARGQRWGNSE-----AYAKSLED----------AEEVTKKAERAARFGLPVQEAVGGVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGGEREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLGDCSANVIFDDAAAAKRALEAVSAPLPP 279 D E +Y A C+ A++RA+RF EYK+PD Q ++ R + ++GF D+ S EE AK+ AR R+ +E A+ + + +EE ++A RAA+FG+ + L+ A P K L ER + N + E +H+++LD + F ++R+ D+L YFT + P YVEW+ D S ++F DA RAL ++SA + P Sbjct: 246 DLLTPEQRVQYVAGCEGAKKRAQRFNSEYKQPDVKQFLDSKIVRMMQRSGAVTEKGFSTGFDVMSAEEVAKREARRNRFNVAEYAIEGGIAREISEGLTEDELAKRSEEAARRAGRAAKFGIETHSNMQ------------LHAASP--------------KVL-------AERVDMNTAL------------EARDDAIHMYSLD-DAFTSVRTRDILAYFTGYGPSYVEWINDSSCTIVFHDAFTVSRALLSLSADIAP 460
BLAST of NO20G00640 vs. NCBI_GenBank
Match: XP_008879153.1 (hypothetical protein H310_13430 [Aphanomyces invadans] >ETV92189.1 hypothetical protein H310_13430 [Aphanomyces invadans]) HSP 1 Score: 85.5 bits (210), Expect = 6.200e-13 Identity = 72/259 (27.80%), Postives = 113/259 (43.63%), Query Frame = 0 Query: 36 DPFLAELEAKYAAECDKARRRAERFGVEYKEPDKAQLFAAETKRAQRMR---PDEGFYVSMDLQSQEEKAKQAARGQRW--------------GNSEAYAKSLEDAEEVTKKAERAARFGLPVQEAVGGVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGGEREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLGDCSANVIFDDAAAAKRALEAVSAPLP 278 D E A++AA C+ ARRR RFG E++ P+ Q ++ R + D+GF D+ S EE AK+ AR R+ N + L+ EE+ ++A R+A+FG A G L A P KV V + ++V + +H+++LD ++F ++R+ D+L YF + P YVEW D S ++FDDA RAL A+++ +P Sbjct: 228 DLLTTEQRAEFAAACESARRRVARFGGEFRMPNAKQFLDSKVVRIMQRSGAVADKGFATGFDVLSAEEAAKRDARRNRFNLTMDYDIKSAREISNGATEEEILKHQEELKRRAARSAKFG---NTAAFTSTFVPGSAEGALVAASP-------KVLAERVDLDVN--------------------------QDVRSDALHMYSLD-DQFTSVRTRDILAYFLGYGPSYVEWTNDSSCTIVFDDAFTVSRALLALTSEMP 449
BLAST of NO20G00640 vs. NCBI_GenBank
Match: XP_005651718.1 (hypothetical protein COCSUDRAFT_55196 [Coccomyxa subellipsoidea C-169] >EIE27174.1 hypothetical protein COCSUDRAFT_55196 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 85.1 bits (209), Expect = 8.100e-13 Identity = 74/241 (30.71%), Postives = 109/241 (45.23%), Query Frame = 0 Query: 40 AELEAKYAAECDKARRRAERFGVEYKEPDKAQLFAAETKRAQRMRPDEGFYVSMDLQSQEEKAKQAARGQRWGNSEAYA--KSLEDAEEVTKKAERAARFGLPVQEAVGGVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGGEREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLGDCSANVIFDDAAAAKRALEAVSAPLPP 279 AE E+ E + RRRAERFG +Y +P K +E ++ + + EGF +DL +EE A+ R QR+ + E E+ KK +RAARFG+ A G L + + L +K +E G W+ P EA +H++ +D + + D L YF+D+ P +VEW+ D S NV+F+D AKRAL + PLPP Sbjct: 16 AEAESVIDTEKELHRRRAERFGTDYVDPSKRSDLRSEFRKQKFKK--EGFKTGLDLFDEEEVARMQVRAQRFQTELKLPDYRPAEVPEDEAKKQQRAARFGVDYAPADKGALME--------------------------IDVLEEK------KEHG-------WD----IPRRPEA--IHLYGVD-----CMSTADCLAYFSDYGPTFVEWIDDSSCNVLFEDDYTAKRALIGLGKPLPP 204
BLAST of NO20G00640 vs. NCBI_GenBank
Match: XP_002904104.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY54282.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 84.7 bits (208), Expect = 1.100e-12 Identity = 79/254 (31.10%), Postives = 119/254 (46.85%), Query Frame = 0 Query: 34 RQDPFLAELEAKYAAECDKARRRAERFGVEYKEPD-KAQLFAAETKRAQRMRP-DEGFYVSMDLQSQEEKAKQAARGQRWGNSE-------AYAKSLEDAEEVTKKAERAARFGLPVQEAVGGVLRKMGLNPKFLYVADPARHDPGRKVQPNAVKALTDKGGEGGEREEGNGGMATVWEPVEPPPEEVEASKVHVHALDREEFQAIRSGDVLRYFTDFFPRYVEWLGDCSANVIFDDAAAAKRALEAVSAPLPP 279 ++D +E +Y AE ++RRAERFG + PD K L E ++ QR GF +D+ SQEE++K+ R +R+ + AK+LE + AE+ QE + +K GL+ + + V P +KA + K R E A V VE +H+++LD E+FQ +R+ DV+ YF + P YVEW D S ++F D A RAL A+S +PP Sbjct: 223 KEDLLTSEQRQQYEAEYAASKRRAERFGAPFAPPDIKKFLDPREVRKLQRSGAIVPGFSTGIDITSQEEQSKREQRMKRFDTPQFAVEYTAETAKALEQGMTQEEWAEKQRD-----QEKLRARAQKFGLSAE----------EDHSNVVPTGIKAASAK-----VRRERYDVKAPV---VEGQSVLFRDDALHMYSLD-EKFQQVRTSDVMDYFVGYGPAYVEWFNDSSCTIVFQDNFTAARALIALSQEIPP 452 The following BLAST results are available for this feature:
BLAST of NO20G00640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00640 ID=NO20G00640|Name=NO20G00640|organism=Nannochloropsis oceanica|type=gene|length=2450bpback to top protein sequence of NO20G00640.1 >NO20G00640.1-protein ID=NO20G00640.1-protein|Name=NO20G00640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=611bpback to top Synonyms
Publications
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