NO20G00600, NO20G00600 (gene) Nannochloropsis oceanica

Overview
NameNO20G00600
Unique NameNO20G00600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5467
Alignment locationchr20:201254..206720 -

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Properties
Property NameValue
DescriptionSix-bladed beta-propeller, TolB
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:201254..206720 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011045N2O_reductase_N
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO20G00600 vs. NCBI_GenBank
Match: XP_005855035.1 (cell surface [Nannochloropsis gaditana CCMP526] >EKU21320.1 cell surface [Nannochloropsis gaditana CCMP526] >EWM22181.1 Six-bladed beta-propeller, TolB [Nannochloropsis gaditana])

HSP 1 Score: 760.8 bits (1963), Expect = 8.300e-216
Identity = 587/1141 (51.45%), Postives = 723/1141 (63.37%), Query Frame = 0
Query:    3 AWHKRRSYPQEGGITSPWRAAILLVVGLLAFC--ANEAHAQSLTPYATMITGAMNYEDTAQALSVDNAGNVLVVGNYRSGTVTVADTTTLTNSGPVDSADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMSFSPVKSEKNSEVVENIIFDEVALPSNVFIVKISSVGKVIWTTQTGDTNIASVSVDVVLERVYITGTFPSYLLTTNDDENWKRIDQWRTAAPPDVDDDGSGASEDTVTEVNVFTDMEEKKSTDFWEDDPFARD--PTEGGDDGTLTDIYVDYYSTATGELVAGTVFTGEMNESPTDLLLEGGEERGKERSIVVAGFSESGDLRMAKNLILRNTLEPNQGSVYGFVGKLDPTTMQMVWGKSLGVAAGSRPLRLALDTTRRTFGGDILYVAGTFGSPEMVALMKTTAGAIGSSTLPTLLRMDAATGKIMWVRGLPQTQQVGVDQNGGLLVTGIFTGSTSFSYEIPNLIASSANGDLYLARIDAAANGTVVEVDRFGGGSTGRYSVNDFQMDRMGNAYWAGNYTSGALTFAGKQLKTPGSGNSDGFAGRMAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDNVPTAGSVGLGGVPAASVVDTSSTTALATGTSVDMVLTYAGQQSSILEFQRSLYQLLRPYATSYATFIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGRFLSVNRCGDSRAARFSLPFFIEAKNRAATSKILGLLDDLVKGVLALDNGFSVFDNGVLCNVDYRGTSLSPLMESKTFMPPPQVVPAITTSGASDVGGTTEVNCQGQRGLW---LGGGFVLGFFFLVLALGALYGHHTMTQRRQRLRAASARPAAREVGRQDKFFTAL-DLSPSGPASMPVSGGGSIMSSPELARAIAQEKERH--------AAERAKLAKEHEAALNVAVAEAVAREGDRLRDEHTRTLAAVRRSAAQGKGGVVLPGDKEKWEAEQEALISAAVAXXXXXXXXXXXXXGGSEGKGKEGGS--ALVEAVTAER 1126
            AW +R   P+   ++  WR   L+ + +  F   A +A  ++L  YAT I  + N EDT Q L++D  GN +V G++RS +VTVADT TL N GP  ++D+F+A F ADGSL+WAA+WGG+ DD+VVDV ++P+G  AYVVGVFKS ++SFSPV SE N +V+ENII+D   LP+NVFIVK+SS GKV+W TQTGD NIASVSVD   +RVY+TGTFPSYL T NDD+ WK ++        D D    G  E+T              ST  W ++PF ++   T   DDG  TD+YVDYYS+ TGELV GTVFTG+++E PTDL+LE G       +  V GFSESG +R+A NL L NT  P  G  YGFV KLDPT   +VWGK+LG+A GS PLRLA+D+TR T    +LYV GTFGSPEM+ALM++TAG IGSS  P+L+RM+A TG+I+WV+GLP  QQVGVD  G + V G F  S SFSY+IPNLIA SANGD+YLAR+D  + G VV+V+RFGGGSTG+Y+VND  +D  GN YWAGN+T GA+ FA   L TPGSGN DGF GR+A             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              +  S+  G +P  +++DTS ++A   GT+VDMVLTYAG Q++ILEFQRSLYQL RPYATSYATFIPS                                               + R L VNRC D++ A+FSLPF+IEAKNRAAT+KIL LL+D++ GV A+D+G ++FDN VLC+V Y   S SPL+++      PQ+VPA  TSG   +G      CQ ++G+    L  G VLG   ++L++G  Y    + Q R+  R A       +  R   FFT    L+P   AS+  +G G+I S  EL R +  EKER         AAER +L  EHEAAL    A AV                      AQGK    LP +KE WE E++ +I+AA+                     KE GS   L +AV AER
Sbjct:    4 AWLQRSREPRFFAVSFSWRFGFLIAIVIFIFLAEAGKAQGETLPLYATKIASSNNEEDTVQTLAIDADGNAIVAGSFRSESVTVADTATLANQGPPGTSDVFVAHFKADGSLNWAANWGGNHDDVVVDVAMDPSGASAYVVGVFKSPKISFSPVGSETNDDVLENIIYDADTLPTNVFIVKVSSAGKVLWRTQTGDKNIASVSVDSDSQRVYVTGTFPSYLATRNDDDTWKALESSLPLGVVDDDMTDDGGPEET----GPVEQAGGSPSTSIWAENPFHKEGTATPAPDDGYSTDMYVDYYSSVTGELVDGTVFTGDLDEIPTDLVLEAG-----TTTPFVTGFSESGRVRLAPNLALTNTDSPLPGDHYGFVAKLDPTGKLVVWGKTLGLALGSNPLRLAVDSTRTTAPWTMLYVTGTFGSPEMMALMESTAGRIGSSLFPSLVRMNANTGEIVWVKGLPPPQQVGVDYTGAITVAGTFKASVSFSYDIPNLIARSANGDMYLARMDGHSQGEVVQVERFGGGSTGKYTVNDLAVDPAGNVYWAGNFTGGAIKFADTMLSTPGSGNIDGFFGRVAHPLPGRTAAPQKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPL----------SIDSLSSGTLP--TLLDTSGSSAAVAGTNVDMVLTYAGSQTTILEFQRSLYQLFRPYATSYATFIPSVAALNRRRMAGSSPITPASTLSLQELEYQASQTRDGRS---------YERSLRVNRCTDTKTAKFSLPFYIEAKNRAATAKILNLLEDMINGVSAMDSGRNIFDNTVLCSVSYSALSASPLIQADDSFAAPQMVPA--TSGVETMGADGAA-CQDKKGIQAFSLIMGIVLGLLGVMLSVGVFY----VVQSRRLQRPARVTEPQSQPPR--SFFTGFKGLTPKTRASLSATGSGAIASPEELTRQLEAEKERWRARHQTVLAAERGRLKIEHEAAL----AHAVKXXXXXXXXXXXXXXXXXXXHVAQGK-REALPFEKESWERERDRIIAAAIT------REKKKWQAEERMDTKEAGSDQILADAVNAER 1094          
BLAST of NO20G00600 vs. NCBI_GenBank
Match: EWM22178.1 (hypothetical protein Naga_100153g8 [Nannochloropsis gaditana])

HSP 1 Score: 234.2 bits (596), Expect = 2.700e-57
Identity = 175/567 (30.86%), Postives = 288/567 (50.79%), Query Frame = 0
Query:   19 PWRAAILLVVGLLAFCANEAHAQSLTPYATMITGAMNYEDTAQALSVDNAGNVLVVGNYRSGTVTVADTT----TLTNSGPVDSADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMSFSPVKSEKNSEVVENIIFDEVALPS-NVFIVKISSVGKVIWTTQTGDTNIASVSVDVVLERVYITGTFPSYLLTTNDDENWKRIDQWRTAAPPDVDDDGSGASEDTVTEVNVFTDMEEKKSTDFWEDDPFARDPTEGGD----DGTLTDIYVDYYSTATGELVAGTVFTGEMNESPTDLLLEGGEERGKERSIVVAGFSESGDLRMAKNLILRNTLEPN--QGSVYGFVGKLDPTTMQMVWGKSLGVAAGSRPLRLALDTTRRTFGGDILYVAGTFGSPEMVALMKTTAGAIGSSTLPTLLRMDAATGKIMWVRGLPQTQQVGVDQNGGLLVTGIFTGSTSFSYEIPNLIASSANGDLYLARIDAAANGTVVEVDRFGG-GSTGRYSVNDFQMDRMGNAYWAGNYTSGALTFAGKQLKTPGSGNSDGFAGR 574
            P +  ++  V +L        AQ++  YA  I+G   ++DTA+A++VD  GN  VVG++ + ++ + + T      T      SAD FLA+  + G L+WA  +GGD DD+V DVVV+P G   ++ G F+S  ++F           V N+I+     P  N +++++ + G VIW TQTGD+++ S+ VD   + ++++G+FP     + ++E+     ++      D  DDG G+ E           M +KK                GGD     G+L DIYVD+YS  TG+L++G  FTG+ ++  TD+ +       K  ++++ G+  S  L + +  +LR+   PN  +    GF+ +LD     ++WG+ +G  A S PL++A D        + L++ G F    ++A  ++   + G      L+ +   TG I WV+ +P    + VD  G L ++G  T  T F      +   S  GD+Y+AR+  A +GT++    FGG G  G YSV    +D   N Y AGNY+ G+L   G+ L +PG+ + DGF GR
Sbjct:   47 PRKHGLIASVFILVLGLGATQAQAVAGYALRISG-KKWDDTAKAMAVDKVGNAYVVGDFHAESIQIGNMTFKNQGKTGQSADPSADSFLAKIDSSGDLEWAFVFGGDMDDVVQDVVVDPDGGNVFLTGTFQSEVLTFGDA-----GPPVYNLIYGLADEPEYNTYLMRVDAEGTVIWVTQTGDSDVGSIVVDAARDCLFLSGSFPGEPPVSEENES-NFGSKFSAGLEDDDTDDGRGSGE----------LMGKKK----------------GGDGLFKKGSL-DIYVDHYSYRTGDLMSGVTFTGDRDDVNTDMAI-----LPKSSALLITGYFYSDVLTLDEMSVLRSE-NPNKRRADPTGFLARLDSIYGHVMWGQEVGEIASSPPLQVAADE-----ASESLFITGNFLGRSILA--RSDGKSAG------LISLSLKTGSIQWVKAVPAPASIVVDYLGFLYISGTTTKDTPFGANGGLISIGSDAGDIYVARLQ-AEDGTILFDRSFGGEGKRGAYSVATVGVDAENNVYLAGNYSKGSLVLGGQALDSPGT-DVDGFVGR 558          
BLAST of NO20G00600 vs. NCBI_GenBank
Match: XP_005855036.1 (exported nucleotide-binding protein [Nannochloropsis gaditana CCMP526] >EKU21321.1 exported nucleotide-binding protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 206.8 bits (525), Expect = 4.600e-49
Identity = 153/484 (31.61%), Postives = 247/484 (51.03%), Query Frame = 0
Query:   98 SADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMSFSPVKSEKNSEVVENIIFDEVALPS-NVFIVKISSVGKVIWTTQTGDTNIASVSVDVVLERVYITGTFPSYLLTTNDDENWKRIDQWRTAAPPDVDDDGSGASEDTVTEVNVFTDMEEKKSTDFWEDDPFARDPTEGGD----DGTLTDIYVDYYSTATGELVAGTVFTGEMNESPTDLLLEGGEERGKERSIVVAGFSESGDLRMAKNLILRNTLEPN--QGSVYGFVGKLDPTTMQMVWGKSLGVAAGSRPLRLALDTTRRTFGGDILYVAGTFGSPEMVALMKTTAGAIGSSTLPTLLRMDAATGKIMWVRGLPQTQQVGVDQNGGLLVTGIFTGSTSFSYEIPNLIASSANGDLYLARIDAAANGTVVEVDRFGG-GSTGRYSVNDFQMDRMGNAYWAGNYTSGALTFAGKQLKTPGSGNSDGFAGR 574
            SAD FLA+  + G L+WA  +GGD DD+V DVVV+P G   ++ G F+S  ++F           V N+I+     P  N +++++ + G VIW TQTGD+++ S+ VD   + ++++G+FP     + ++E+     ++      D  DDG G+ E           M +KK                GGD     G+L DIYVD+YS  TG+L++G  FTG+ ++  TD+ +       K  ++++ G+  S  L + +  +LR+   PN  +    GF+ +LD     ++WG+ +G  A S PL++A D        + L++ G F    ++A  ++   + G      L+ +   TG I WV+ +P    + VD  G L ++G  T  T F      +   S  GD+Y+AR+  A +GT++    FGG G  G YSV    +D   N Y AGNY+ G+L   G+ L +PG+ + DGF GR
Sbjct:   16 SADSFLAKIDSSGDLEWAFVFGGDMDDVVQDVVVDPDGGNVFLTGTFQSEVLTFGDA-----GPPVYNLIYGLADEPEYNTYLMRVDAEGTVIWVTQTGDSDVGSIVVDAARDCLFLSGSFPGEPPVSEENES-NFGSKFSAGLEDDDTDDGRGSGE----------LMGKKK----------------GGDGLFKKGSL-DIYVDHYSYRTGDLMSGVTFTGDRDDVNTDMAI-----LPKSSALLITGYFYSDVLTLDEMSVLRSE-NPNKRRADPTGFLARLDSIYGHVMWGQEVGEIASSPPLQVAADE-----ASESLFITGNFLGRSILA--RSDGKSAG------LISLSLKTGSIQWVKAVPAPASIVVDYLGFLYISGTTTKDTPFGANGGLISIGSDAGDIYVARLQ-AEDGTILFDRSFGGEGKRGAYSVATVGVDAENNVYLAGNYSKGSLVLGGQALDSPGT-DVDGFVGR 445          
BLAST of NO20G00600 vs. NCBI_GenBank
Match: OFY18050.1 (hypothetical protein A2X02_09805 [Bacteroidetes bacterium GWF2_29_10])

HSP 1 Score: 75.1 bits (183), Expect = 2.100e-9
Identity = 60/205 (29.27%), Postives = 93/205 (45.37%), Query Frame = 0
Query:   26 LVVGLLAF-CANEAHAQSLTPYATMITGAMNYEDTAQALSVDNAGNVLVVGNYRSGTVTVADTTTLTNSGPVDSADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMSFSPVKSEKNSEVVENIIFDEVALPSNVFIVKISSVGKVIWTTQTGDT-NIASVSVDVVLE-RVYITGTFPSYLLTTNDD 228
            ++V LL F C NE   Q+ T Y     G +NY D A+++  D  GN+ VVG +RS ++ +  T  ++        DIFL +  ++G++ WA S GG   D    V V+  G   Y+ G + S+ + F  V    N                + FI K  S G ++W    G + N    S+ V     +Y+TG F S +    D+
Sbjct:    7 IIVFLLFFICFNEIKGQAPTWYWAKNFGGVNY-DEAKSICTDKDGNIYVVGTFRSSSINIGGTNLVS----YGYEDIFLVKLSSNGNVLWAKSGGGQNSDNASSVGVDDLGN-VYITGHYASSSLEFDNVSVSNNGSY-------------DAFIAKFDSNGNIVWLDNAGGSGNEYCTSLKVCDNGNIYVTGYFNSSIAYFGDE 192          
BLAST of NO20G00600 vs. NCBI_GenBank
Match: PIP76154.1 (hypothetical protein COW85_15725 [Ignavibacteria bacterium CG22_combo_CG10-13_8_21_14_all_37_15])

HSP 1 Score: 73.9 bits (180), Expect = 4.700e-9
Identity = 55/170 (32.35%), Postives = 89/170 (52.35%), Query Frame = 0
Query:   57 EDTAQALSVDNAGNVLVVGNYRSGTVTVADTTTLTNSGPVDSADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMSFSPVKSEKNSEVVENIIFDEVALPSNVFIVKISSVGKVIWTTQTG---DTNIASVSVDVVLERVYITGTFPSYLLT 224
            +D A +++ D  GNV + G++ S T+T   +TTLTN+G   + DIF+ ++   G++ WA S GG   +    V  +  G   YVVG ++S+ ++F        S  + N+        S++F+VK  + G V+W+   G   D N  SVS D  L  +Y+ G F  Y +T
Sbjct:  245 DDLAYSVATDALGNVYMAGSFNSVTITFG-STTLTNAGSPYN-DIFIVKYDTSGNVLWAKSAGGSSSEEARSVTADATGN-VYVVGDYQSSSITF-------GSTTLTNV------GSSDMFVVKYDASGNVLWSKSEGEIYDDNAFSVSTD-ALGNLYVAGEFHLYPIT 397          
BLAST of NO20G00600 vs. NCBI_GenBank
Match: PRW58747.1 (T9SS C-terminal target domain-containing [Chlorella sorokiniana])

HSP 1 Score: 73.6 bits (179), Expect = 6.100e-9
Identity = 132/493 (26.77%), Postives = 194/493 (39.35%), Query Frame = 0
Query:   58 DTAQALSVDNAGNVLVVGNYR-SGTVTVADTTTLTNSGPVDSADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKS-ARMSFSPVKSEKNSEVVENIIFDEVALPSNVFIVKISSVGKVIWTTQTGDT---NIASVSVDVVLERVYITGTFPSYLLTTNDDENWKRIDQWRTAAPPDVDDDGSGASEDTVTEVNVFTDMEEKKSTDFW--------EDDPFARDPTEGGDDGTLTDIYVDYYSTATGELVAGT--VFTGEMNESPTDLLLE------------GGEERGKE---------RSIVVAG-FSESGDLRMAKNLILRNTLEPNQGSVYGFVGKLDPTTMQMVWGKSLGVAAGSRPLRLALDTTRRTFGGDILYVAGTFGSPEMVALMKTTAGAIGSSTLPTLLRMDAATGKIMWVRGLPQT-----QQVGVDQNGGLLVTGIFTGSTSFSYEIPNLIASSANGDLYLARIDA 509
            D   A++VD A N  + G ++ S  +   + T +T + P    D+F+      G   WA SWGG  +D    + V  +G+ A VVG F S    SF  +                 A  S+ F+VK+SS G V+W T  G T   +  +V  D   + VY+TGTF         + N+       T A  +     +G S+  + +      ++    T  W         D+P A +    G  G+L      Y+ +  G +V  T    T  +N     + L+            G    G E          S+ VAG F +S  L     L L+N    + G+   FV KLD T+   +W   +G          AL        GD + V G F +        TTAG     T     R++ ATG  MWV GL  T     + V V Q  G+ V G F  S S      NL  S+ + D++LA ++A
Sbjct:  684 DVGTAVAVDAADNTWITGTFKISMLIGATNLTAVTATSP----DVFVTLLDPRGVPMWAVSWGGLGNDASAALAVSTSGD-AVVVGTFSSVGSASFGAINLTS-------------AGGSDAFVVKLSSSGAVLWATGFGSTSSDDARAVCFDAAGD-VYVTGTF---------NRNFTVATASGTTALVN-----AGGSDTYIMK------LDSASGTVLWARSFGGSASDEP-ALNGLVVGPAGSL--YLAGYFKSTCGMMVGTTNLTATSPLNWDAFVISLDASSGAPLWATSLGSGSVGDEFINGMVFSSGSLFVAGTFGKSSGLGGWLMLGLQNL--TSAGTYDAFVTKLDATSGAALWAVRMGGPLSDEAKSAAL------VSGDAV-VVGNFQNVTTGFASLTTAGGTDVYT----ARLNGATGATMWVTGLGSTGSDDLKSVAVSQTNGVEVVGSF--SNSILVGTTNL-TSAGSTDVFLAALNA 1118          
BLAST of NO20G00600 vs. NCBI_GenBank
Match: OFY65532.1 (hypothetical protein A3H98_02610 [Bacteroidetes bacterium RIFCSPLOWO2_02_FULL_36_8] >OFY71657.1 hypothetical protein A3G23_00430 [Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_37_12])

HSP 1 Score: 72.0 bits (175), Expect = 1.800e-8
Identity = 123/512 (24.02%), Postives = 199/512 (38.87%), Query Frame = 0
Query:   30 LLAFCANEAHAQSLTPYATMITGAMNYEDTAQALSVDNAGNVLVVGNYRSGTVTVADTTTLTNSGPVDSADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMSFSPVKSEKNSEVVENIIFDEVALPSNVFIVKISSVGKVIWTTQTGDTNI---ASVSVDVVLERVYITG-------TFPSYLLTTNDDENWK----RIDQ-----WRTAAPPDVDDDGSGASEDTVTEVNVFTDMEEKKSTDFWEDDPFARDPTEGGDDGTLTDIYVDYYSTATGELVA---GTVFTGEMNESPTDLLLEGGEERGKERSIVVAG-FSESGDLRMAKNLILRNTLEPNQGSVYGFVGKLDPTTMQMVWGKSLGVAAGSRPLRLALDTTRRTFGGDILYVAGTFGSPEMVALMKTTAGAIGSSTLPTLLRMDAATGK------IMWVRGLPQT-----QQVGVDQNGGLLVTGIFTGSTSFSYEIPNL-IASSANGDLYLARI 507
            L  F     +AQ  + Y    +   N  D   + + D  GN++V G + S ++T   TTTL N   V S DIF+ ++  +G++ WA S GG  D+I    VV+  G    ++G+FKS+ ++F         +              N+FIVK  + G V+W    G  N     S S D     + +TG       TF +  LT     NW     + D      W  +A     D+    + D  T  N+    +   ST  +      +       D ++TD+++  +      L A   G     E     TD+            +I++ G F +S       ++    T+  N G    F+ K DP    ++W KS+G +        A D       G+I+ + G F SP M         A G+  L T+   D   GK      ++W +    T          D  G ++VTG F     +S     L + +S   D+++A++
Sbjct:   19 LYIFLIQHTYAQ-YSKYEWAKSARGNGFDNGYSCATDAIGNIIVTGYFSSSSITFG-TTTLHN---VASEDIFIVKYDLNGNVLWAKSAGGISDEIGRSCVVDGGGNI-ILMGIFKSSSITFGTTTLSNTGD-------------CNLFIVKYDANGNVLWAKSEGGINFDQGNSCSTD-ANGNIIVTGFFSSPSITFGTITLTNKYAGNWDIFIVKYDPNGNVLWAKSAGGTSGDNSFTCATD--TNKNIIVMGQFGSSTITFGSTILTK------TDSSITDMFITKFDANGNVLWARNMGGTSYYEGYHCTTDI----------NGNIILMGLFGKS-------SITFGTTILSNAGYSDVFIVKYDPDG-NVLWAKSVGGSKADVGNGCATDAK-----GNII-ITGDFESPTM---------AFGTKILTTVGYSDMFIGKYDLSGNVLWAKSAGGTSDDRGSSCATDMGGNIIVTGYF---NRYSITFGTLTLNNSGYNDIFIAKL 466          
BLAST of NO20G00600 vs. NCBI_GenBank
Match: WP_105040643.1 (T9SS C-terminal target domain-containing protein [Chitinophagaceae bacterium RB1R16] >PQJ09871.1 hypothetical protein CJD36_018270 [Chitinophagaceae bacterium RB1R16])

HSP 1 Score: 71.2 bits (173), Expect = 3.000e-8
Identity = 58/179 (32.40%), Postives = 89/179 (49.72%), Query Frame = 0
Query:   58 DTAQAL--SVDNAGNVLVVGNYRSGTVTVADTTTLTNSGPVDSADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMSFSPVKSEKNSEVVENIIFDEVALP-----SNVFIVKISSVGKVIWTTQTGDTNIA---SVSVDVVLERVYITGTFPSYLLTTND 227
            DTA A    VD AGNV V G YRS  VT+  +TTLTNSG   + D+FLA+  ++G+  WA +  GD  D ++ + V  +G   Y+ G +KS  +                     +ALP     S++FI K ++ G  +W       ++    S+++D   E VY+TG +   ++  ND
Sbjct:  160 DTAFAFYGGVDKAGNVYVGGQYRSPAVTIG-STTLTNSGLYGTYDMFLAKLDSNGNNIWAKNIDGDSTDNILGMAVSDSGNI-YIGGDYKSPTLQLDAA---------------TLALPAGETRSHLFIAKYNTSGNSVWARDIPTRSVKFLNSMTLD-NYENVYLTGGYTGNIIFNND 320          
BLAST of NO20G00600 vs. NCBI_GenBank
Match: PKP20801.1 (hypothetical protein CVU05_08205 [Bacteroidetes bacterium HGW-Bacteroidetes-21])

HSP 1 Score: 70.1 bits (170), Expect = 6.700e-8
Identity = 55/170 (32.35%), Postives = 88/170 (51.76%), Query Frame = 0
Query:   57 EDTAQALSVDNAGNVLVVGNYRSGTVTVADTTTLTNSGPVDSADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMSFSPVKSEKNSEVVENIIFDEVALPSNVFIVKISSVGKVIWTTQTG---DTNIASVSVDVVLERVYITGTFPSYLLT 224
            +D   ++  D  GN+LV G+++S T+T   + TL N+G   +AD+FL ++   G+  WA S GG  DD    +  +  G   +V G FKS+ ++F        S  + N      A  +++FI+K  + G V+WT   G   D N  SV VD     V+++G F S ++T
Sbjct:   11 DDYGYSVCTDTNGNILVSGSFKSSTITFG-SYTLINAG---NADVFLVKYDNSGNDIWAKSAGGTSDDSGESIFADENGN-VFVSGYFKSSTITF-------GSYTLTN------AGNADLFIIKYDNSGNVLWTKSAGGGYDDNGESVCVD-TNGNVFVSGYFKSSIIT 161          
BLAST of NO20G00600 vs. NCBI_GenBank
Match: WP_020529700.1 (hypothetical protein [Flexithrix dorotheae])

HSP 1 Score: 69.3 bits (168), Expect = 1.200e-7
Identity = 50/160 (31.25%), Postives = 84/160 (52.50%), Query Frame = 0
Query:   61 QALSVDNAGNVLVVGNYRSGTVTVADTTTLTNSGPVD-SADIFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMSFSPVKSEKNSEVVENIIFDEVALPSNVFIVKISSVGKVIWTTQ-TGD-TNIASVSVDVVLERVYITGTF 218
            +++ +D  GNV ++G ++   +  AD   L NS P + S+DIF+A+F  DG+L W  S+ G+K D V  +  +P G F YV G F+S+ +   P      +E + N            F++K+   G ++W  +  GD TN+ ++ V    E +Y+ G F
Sbjct: 1406 ESVCIDFQGNVSLLGKFKGAKLDWADGNILENSDPTESSSDIFIAQFTGDGNLVWQKSFKGEKADEVEAIKTDPNG-FLYVTGSFESSTLEIEP------NEFIHN------PTQKQPFLLKLDDKGHLVWKKKIAGDSTNLHAMEVGSNGE-IYLAGEF 1551          
The following BLAST results are available for this feature:
BLAST of NO20G00600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 15
Match NameE-valueIdentityDescription
XP_005855035.18.300e-21651.45cell surface [Nannochloropsis gaditana CCMP526] >E... [more]
EWM22178.12.700e-5730.86hypothetical protein Naga_100153g8 [Nannochloropsi... [more]
XP_005855036.14.600e-4931.61exported nucleotide-binding protein [Nannochlorops... [more]
OFY18050.12.100e-929.27hypothetical protein A2X02_09805 [Bacteroidetes ba... [more]
PIP76154.14.700e-932.35hypothetical protein COW85_15725 [Ignavibacteria b... [more]
PRW58747.16.100e-926.77T9SS C-terminal target domain-containing [Chlorell... [more]
OFY65532.11.800e-824.02hypothetical protein A3H98_02610 [Bacteroidetes ba... [more]
WP_105040643.13.000e-832.40T9SS C-terminal target domain-containing protein [... [more]
PKP20801.16.700e-832.35hypothetical protein CVU05_08205 [Bacteroidetes ba... [more]
WP_020529700.11.200e-731.25hypothetical protein [Flexithrix dorotheae][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL024nonsL024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR068ngnoR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00600.1NO20G00600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00600.1NO20G00600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00600 ID=NO20G00600|Name=NO20G00600|organism=Nannochloropsis oceanica|type=gene|length=5467bp
ACAATGCAGTGGACGCTTCTTGAGAGATCTTCCGGCCTTCCTTCGTCTTT
GGCATGGACCGGTGCTAGCAAGTCGTCGATACGAGGGGTCTAATCAGTAG
CAGTCGCAAAGCATAAATATAAGCAAACATATCTTTACAAGCACACAAGC
ACAAATCCCAAAGCCATACAAGAAAGTATGTGGGCCTGGCACAAACGGCG
GAGTTACCCGCAAGAAGGAGGCATTACCTCTCCATGGCGAGCGGCCATCC
TGCTGGTCGTGGGGCTGTTGGCCTTTTGTGCCAACGAGGCGCATGCCCAA
TCACTGACCCCATATGCGACCATGATCACCGGTGCTATGAATTACGAAGA
TACGGCCCAAGCCCTCTCAGTGGACAATGCGGGAAATGTGCTGGTGGTGG
GGAACTATCGGTCGGGGACCGTCACTGTGGCGGACACGACAACCCTCACC
AACTCCGGACCTGTGGACAGCGCAGATATTTTCCTGGCTCGTTTTCTAGC
AGATGGCTCTTTGGACTGGGCGGCTAGCTGGGGTGGCGACAAGGACGATA
TCGTGGTGGACGTTGTAGTGGAGCCTGCAGGGGAATTCGCTTATGTTGTT
GGTGTGTTTAAGTCCGCTCGCATGAGTTTCAGTCCGGTGAAGTCCGAGAA
GAATAGCGAGGTCGTGGAGAACATTATTTTTGACGAGGTGGCCTTGCCAT
CGAACGTGTTTATCGTCAAGATCTCCTCGGTAGGGAAGGTAATTTGGACA
ACGCAGACGGGGGACACGAACATAGCAAGCGTGAGTGTGGACGTGGTCTT
GGAGCGCGTCTATATCACCGGGACCTTCCCCTCTTATCTCTTGACGACCA
ACGACGATGAGAACTGGAAACGAATCGACCAATGGCGGACCGCGGCGCCG
CCCGACGTGGACGATGATGGGTCGGGCGCGTCGGAGGACACGGTGACAGA
GGTGAACGTGTTCACAGATATGGAGGAGAAGAAGAGTACTGATTTTTGGG
AGGATGATCCCTTTGCAAGAGACCCTACGGAAGGAGGAGATGATGGTACA
TTGACAGACATCTATGTGGACTATTACTCGACGGCGACCGGGGAGTTGGT
TGCTGGCACGGTATTTACGGGGGAGATGAACGAGAGTCCGACAGATCTCT
TGTTGGAAGGAGGGGAGGAGAGAGGAAAGGAGCGGTCGATAGTGGTTGCG
GGATTTTCGGAATCAGGGGATCTGCGCATGGCCAAAAATTTGATTTTGAG
AAATACGCTGGAGCCGAACCAGGGGAGTGTGTACGGGTTTGTTGGAAAGT
TGGATCCGACGACCATGCAAATGGTGTGGGGGAAGAGTTTGGGCGTGGCG
GCAGGGTCGCGGCCTCTGAGGCTGGCGTTGGACACGACGAGGCGAACATT
TGGAGGGGATATTTTGTATGTGGCAGGGACATTTGGCTCGCCGGAGATGG
TTGCGTTGATGAAAACGACGGCGGGGGCGATTGGGAGTAGCACGTTGCCG
ACGCTGTTGAGGATGGATGCGGCGACAGGCAAGATTATGTGGGTGAGGGG
TCTACCGCAGACGCAGCAGGTGGGGGTGGACCAGAATGGGGGGCTGCTGG
TGACGGGTATCTTCACAGGCTCCACGAGCTTTTCATACGAGATCCCGAAT
CTGATTGCGAGCAGCGCGAATGGGGATTTGTACCTGGCAAGGATTGATGC
CGCGGCGAACGGAACGGTGGTAGAGGTGGACCGTTTCGGAGGAGGGAGTA
CAGGACGGTACAGCGTCAATGATTTTCAAATGGACCGCATGGGCAATGCT
TATTGGGCGGGAAATTACACATCAGGTGCTTTGACCTTTGCGGGCAAACA
GCTCAAGACGCCGGGGAGCGGCAACAGCGACGGCTTCGCAGGCCGGATGG
CTGCTGCTGTCAGGACCACCACAGCCGCACCTACCCCACGTCCTCCCCCC
TCCAAAAGCCCTACGTTTGCCCCTACCACCCTCTCCCCTACTCCGGCCCC
CACCACCGTGGAATGGGCCGCTGCCCAAGCACTCTTGACCAAGGCGCCTA
CGCGCGTTCCCACCACACGCCCGACCCGCGTACCCACCACCCGTCCCACC
TCAAGTCCTACCCCAAGTCCTCCTACTCGTGCTCCCTCCCGCCTTCCAAC
CGCGGTGCCTACCACGAAAGATACCCCCAATCCTACGGCCAGTAAGGTGG
GAGCAACAACTGCAACAACAGGCATGGGCACACCAACGGACATGCAGACC
ATGGGTGCGACTACGGACAACGTGCCTACAGCAGGAAGTGTAGGGCTTGG
AGGGGTCCCAGCAGCGTCGGTGGTGGACACAAGCAGCACAACAGCTTTGG
CGACAGGGACGAGCGTCGATATGGTACTGACGTACGCGGGGCAGCAATCG
AGTATTTTGGAGTTTCAGCGGTCTTTGTACCAGCTGTTACGGCCTTATGg
taagttatttagaaaggaggaagtaaggacaggagagagagagggaagga
atcagagaatttatacatgtgttgctgaaaggaaggaggatgaatgtcca
tgtatacatatggcagcagtaaggtcttgtgggtcgcaggggcaacgagg
gaggggggagatagacgaagactttcttctgaaggcgcaaaaaaatgaga
aagctggttgattgatcctatcgaaacacattatctaatttctccttctc
ttcttccctttttttctccctctttactaccctgcaccacacagCCACCT
CCTATGCAACCTTCATCCCCAGCAGCGGCGGTACCCGCAGGCTGCAAGAA
TCTAGTACCTCCTCCTCCTCCTCTTCTTCCTCTTCTTCTTCCTCCCGCTC
CCTGTTTTTCACGGAGCTCAGGCGCCATCAGTCCTCCCCCGAGCAGCAGC
AGCAGGAGGAACTATTCGGTCGCTTCCTGAGTGTAAACCGTTGTGGAGAC
AGCAGGGCAGCCAGGTTCAGCCTCCCTTTCTTTATCGAAGCCAAAAATAG
GGCGGCTACTTCCAAAATTCTCGGATTGCTCGATGACCTGGTCAAGGGCG
TGCTGGCGTTAGATAATGGATTCTCAGTCTTTGACAACGGCGTCTTGTGC
AATGTGGACTACCGTGGTACGTCGCTTTCTCCCTTGATGGAGAGCAAGAC
GTTCATGCCTCCCCCTCAGGTCGTTCCGGCCATCACCACCTCGGGTGCCT
CGGACGTGGGCGGAACGACGGAAGTGAATTGCCAGGGCCAGCGAGGCCTA
TGGCTTGGAGGTGGCTTTGTGCTGGGATTTTTCTTTCTCGTTCTCGCATT
GGGTGCCCTTTATGGTCATCACACGATGACGCAGCGCAGGCAGCGGTTGC
GAGCAGCCTCAGCCCGCCCTGCGGCGCGAGAGGTGGGAAGGCAAGACAAG
TTTTTCACGGCTTTAGACCTGTCCCCCTCCGGCCCCGCGTCGATGCCTGT
CTCAGGTGGAGGGTCCATAATGAGCTCGCCCGAGCTTGCCCGAGCGATCG
CTCAGGAGAAGGAGCGTCACGCTGCGGAGCGGGCCAAGCTAGCAAAAGAA
CATGAGGCAGCTCTAAACGTTGCAGTGGCTGAGGCCGTTGCTAGAGAAGG
AGACAGGTTAAGGGATGAGCATACGAGGACTTTGGCGGCCGTCCGTCGCA
GTGCTGCACAAGGAAAGGGAGGGGTGGTGCTGCCGGGGGACAAGGAAAAA
TGGGAAGCGGAGCAAGAGGCTCTCATCAGTGCGGCAGTAGCCAAGGAGAA
GGAGAAGTGGCAGCTGCAACAGCAAACGACAGGAGGGAGCGAAGGAAAAG
GAAAGGAGGGAGGGAGCGCCCTGGTTGAAGCTGTGACAGCAGAACGCAAC
CGTCTCACTCAGGAGCATATTTCTCTCATGTCTGCCGCAGAAGCCAAATG
GCAACAAGCCCAGGAAGAAGCTATAGCAGCTGCGTTGGCGGCTGAGAAGG
AGAAATGGGAGCAGGGGTATGCGGACGACGTAACATCAGCGCTGCAGGAG
GAGAGGGAGAAGTGGGAGGCCGAGCAACAGACTGCGTTGGCCACGCAGAA
ACAAACGCTGAAGCTCCGGTATGCTGCGGCCTTGACGGCGGAGATGGAGA
AATGGGAGCAGGAGAAGGCGTCGTTGCTCACGTCCTTGCAAGCGGCGGCG
TCAGGGAATTCCGAAGGTCTGACGACTGCTGCTCTGCTCGCCGAGCGGGA
GAAGATGACGCACGAGCACACCCAAGCACTCAAGGCGGCTGTAGCCGAGG
AAAAGGAGCGCGAGCGGCAAGAGCGAGAAGCGGAGTTATTTGCCCAGAAG
AATATGTTGAAGCAACGGTATGGTCAGGCCATGATGCAGGAGAAGGAAAA
GTGGCACCAGGAAGCGTTGGAGGCGATGGAAAAGGAGAGGGCAGCGTGGG
AGCAAGAGCATGCGGAATCTCTCCGCATGCAAAAGGACATTTTAAATCCC
AACCACCCCTCGGGAGTAGGAGCCGCGATTGCCGCGGAACGGGAGAAGTG
GATGCAGGAACATGCGGGCAGCCTGGCTTCGGCCTTGGCCGCGGAGAGGG
AGCGAGCGAAGCAGGAGCACGCAACGAGCTTGCAGGCCTCTTTGGCAGCC
CAACGCAAAAAACTCTCAGAGGAGCACGCCAAGACGTTGGCTGCAGCCTT
AGCAGGGGCAACAGGAACGGAGCAAGAGCAAATGGTTGCATTGACAGATG
CCCGGGCGCAGTGGGAGGATGAGATGGCGGCGGAGAAGGCCCGATGGCAG
GAGGAACACGAGGCAGCCATGCTTACGCAGAAGAACGAGCTCAAGCTGCG
ATATGCCTCAGTATTAGCCCAGGAGAAAGAGAAGTGGAAGAATGGGGGAC
AGATGTTTACAACGGCCACCTCTACGATGAATGTTGGCTCGACCACGTCC
ACGGCGGCGACGGCCGCACGGGCGGGTAGCCCTCAACCTCCTGCTGAGGC
CTCCAAGTATTCATTCATGAAGCGTGGAAACGGAGGAGGGGGCGGGGGAG
GAGGCGATGCATCACCATCCAGGAAGTAAATTGATTTCGAATTTGGATAG
CAATTCATTAATTAATCGGAGAGAGTAGAGGAAAGAAAGAAAAGAGCAAT
TAGGATGGAGATAAGCAGGAGAGATTAAATGCTACGAGGCTCGATTGGAG
TGAGTAGAGAAAAGCATCAAAAGAGCGAGTGCAGAAAAGGTGAGAAAAGG
AGATAAAATAGTAGGAGAGATTGCACGCCAATGAGCAAAGATACGTGAGT
GTATAAGAAATTGCTCAGGAAAAAGTGATTTTCCTTCGGTATTTTTAAAT
TTGTATTCGTAAAAGAGAGACACAGATAAGGAGGAAAATTATGAGGACCA
ACATTCTTGGTAAAATTCTACATATGATAACAAGAACAGCGACGATACAG
GATGGAGACGAAGTATCTAGACAGAGAACTGGAGAAAGAAACAAGAGTAG
AAAGCTAGACAATGAAG
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protein sequence of NO20G00600.1

>NO20G00600.1-protein ID=NO20G00600.1-protein|Name=NO20G00600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1519bp
MWAWHKRRSYPQEGGITSPWRAAILLVVGLLAFCANEAHAQSLTPYATMI
TGAMNYEDTAQALSVDNAGNVLVVGNYRSGTVTVADTTTLTNSGPVDSAD
IFLARFLADGSLDWAASWGGDKDDIVVDVVVEPAGEFAYVVGVFKSARMS
FSPVKSEKNSEVVENIIFDEVALPSNVFIVKISSVGKVIWTTQTGDTNIA
SVSVDVVLERVYITGTFPSYLLTTNDDENWKRIDQWRTAAPPDVDDDGSG
ASEDTVTEVNVFTDMEEKKSTDFWEDDPFARDPTEGGDDGTLTDIYVDYY
STATGELVAGTVFTGEMNESPTDLLLEGGEERGKERSIVVAGFSESGDLR
MAKNLILRNTLEPNQGSVYGFVGKLDPTTMQMVWGKSLGVAAGSRPLRLA
LDTTRRTFGGDILYVAGTFGSPEMVALMKTTAGAIGSSTLPTLLRMDAAT
GKIMWVRGLPQTQQVGVDQNGGLLVTGIFTGSTSFSYEIPNLIASSANGD
LYLARIDAAANGTVVEVDRFGGGSTGRYSVNDFQMDRMGNAYWAGNYTSG
ALTFAGKQLKTPGSGNSDGFAGRMAAAVRTTTAAPTPRPPPSKSPTFAPT
TLSPTPAPTTVEWAAAQALLTKAPTRVPTTRPTRVPTTRPTSSPTPSPPT
RAPSRLPTAVPTTKDTPNPTASKVGATTATTGMGTPTDMQTMGATTDNVP
TAGSVGLGGVPAASVVDTSSTTALATGTSVDMVLTYAGQQSSILEFQRSL
YQLLRPYATSYATFIPSSGGTRRLQESSTSSSSSSSSSSSSRSLFFTELR
RHQSSPEQQQQEELFGRFLSVNRCGDSRAARFSLPFFIEAKNRAATSKIL
GLLDDLVKGVLALDNGFSVFDNGVLCNVDYRGTSLSPLMESKTFMPPPQV
VPAITTSGASDVGGTTEVNCQGQRGLWLGGGFVLGFFFLVLALGALYGHH
TMTQRRQRLRAASARPAAREVGRQDKFFTALDLSPSGPASMPVSGGGSIM
SSPELARAIAQEKERHAAERAKLAKEHEAALNVAVAEAVAREGDRLRDEH
TRTLAAVRRSAAQGKGGVVLPGDKEKWEAEQEALISAAVAKEKEKWQLQQ
QTTGGSEGKGKEGGSALVEAVTAERNRLTQEHISLMSAAEAKWQQAQEEA
IAAALAAEKEKWEQGYADDVTSALQEEREKWEAEQQTALATQKQTLKLRY
AAALTAEMEKWEQEKASLLTSLQAAASGNSEGLTTAALLAEREKMTHEHT
QALKAAVAEEKERERQEREAELFAQKNMLKQRYGQAMMQEKEKWHQEALE
AMEKERAAWEQEHAESLRMQKDILNPNHPSGVGAAIAAEREKWMQEHAGS
LASALAAERERAKQEHATSLQASLAAQRKKLSEEHAKTLAAALAGATGTE
QEQMVALTDARAQWEDEMAAEKARWQEEHEAAMLTQKNELKLRYASVLAQ
EKEKWKNGGQMFTTATSTMNVGSTTSTAATAARAGSPQPPAEASKYSFMK
RGNGGGGGGGGDASPSRK*
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Synonyms
Publications