NO20G00480, NO20G00480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00480 vs. NCBI_GenBank
Match: EWM22165.1 (u3 small nucleolar rna-associated protein 10 and nuc211 domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 325.1 bits (832), Expect = 2.100e-84 Identity = 215/411 (52.31%), Postives = 248/411 (60.34%), Query Frame = 0 Query: 2356 VVRSVSVLRRVIEGHKRQDLVG----GGGGLAQLTAFFLRVMDYRNDVAVWEGRTKAEAKRSRLEEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVALVLRLNEEELRPLFLHVAHWKKAGEGEREGGRERGRGSRRLVFYRLVGHLVETLRGIFVPYFGYIWGDIQADLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKCFQYDDEEEGEGGREGGFLSQSRFEGILPYVVGLISDLKPLXXXXXXXXXXXXXXXXSVARGKLIPCLAHMALAVGKDVLWKPYHHQVLMKTRDKDWEVRFVALQAVKETFMCVGEEYLAMLPESIAYLSELMEDEREEVVVLCKETIGYIEDLSGESLESYLA 2763 ++R V+RRVIE +R+ L+G GGGG+ T FFL MDYRN V EG + + KR R EE S++ALVLRLNEEELR LFL VAHWKK+G+G REGG+ SRRLVFYRL+G+LVETLR IFVPYFGYIW DIQADL L XXXXXXXXXXXXXXXX LTKCFQ DD EG +G FL+Q+RF+ ILP + GLI+ L ++A LIPCLA+MALA GKDVLWKPYHHQVLM+TR + WEVR+VAL+ ++ETF+ VGEEYLAMLPESIAYLSEL+EDEREEVV CK TI YIEDLSGESLESYLA Sbjct: 1 MLRLFRVVRRVIETQQRESLLGGHGKGGGGVNVWTGFFLLAMDYRNHVGWTEGGKEGKRKRPRGEEG--------VLEGEGGDRAKVEEVEEAVCESMLALVLRLNEEELRALFLRVAHWKKSGDGGREGGQR----SRRLVFYRLLGYLVETLRSIFVPYFGYIWSDIQADLRL-----FSIPSSSSVPSSILAVHNGEVSXXXXXXXXXXXXXXXXTGEDRMEGGLEPEKQGPILITLILTALTKCFQCDD----EGEEDGNFLTQTRFDAILPLLTGLITGLHSF--LPPASSPSANSTYRALAEANLIPCLAYMALAAGKDVLWKPYHHQVLMQTRARAWEVRWVALRTLRETFVVVGEEYLAMLPESIAYLSELLEDEREEVVEECKTTIAYIEDLSGESLESYLA 388
BLAST of NO20G00480 vs. NCBI_GenBank
Match: XP_005853465.1 (u3 small nucleolar rna-associated protein 10 and nuc211 domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU22897.1 u3 small nucleolar rna-associated protein 10 and nuc211 domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 204.1 bits (518), Expect = 5.400e-48 Identity = 107/167 (64.07%), Postives = 124/167 (74.25%), Query Frame = 0 Query: 2596 LTKCFQYDDEEEGEGGREGGFLSQSRFEGILPYVVGLISDLKPLXXXXXXXXXXXXXXXXSVARGKLIPCLAHMALAVGKDVLWKPYHHQVLMKTRDKDWEVRFVALQAVKETFMCVGEEYLAMLPESIAYLSELMEDEREEVVVLCKETIGYIEDLSGESLESYLA 2763 LTKCFQ DD EG +G FL+Q+RF+ ILP + GLI+ L ++A LIPCLA+MALA GKDVLWKPYHHQVLM+TR + WEVR+VAL+ ++ETF+ VGEEYLAMLPESIAYLSEL+EDEREEVV CK TI YIEDLSGESLESYLA Sbjct: 22 LTKCFQCDD----EGEEDGNFLTQTRFDAILPLLTGLITGLHSF--LPPASSPSANSTYRALAEANLIPCLAYMALAAGKDVLWKPYHHQVLMQTRARAWEVRWVALRTLRETFVVVGEEYLAMLPESIAYLSELLEDEREEVVEECKTTIAYIEDLSGESLESYLA 182
BLAST of NO20G00480 vs. NCBI_GenBank
Match: CBJ49062.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 202.2 bits (513), Expect = 2.100e-47 Identity = 262/773 (33.89%), Postives = 361/773 (46.70%), Query Frame = 0 Query: 2049 SVLHGQAGQVLQDTHALLSLPSFVAIIQELLQHDDHLIRGRALQLFHAKMGGREGGKK---KRLSRGEEHLILEMLPDL-LALVGR---GREGGMEVD-GEGEEE----GVRRGGTGCSPAI---------------QQTAWASLAVLVEGLGGGYAKSFLPLFDHLKALTEEGHKG-----GREGGQGQVHCQVLSSALLCAASTCHALGPLALPKLPTFVPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPNFLNPFLPRLLDSLLINPSLSFATVSPT-------------LDLLATALPPRLLLPILFATYPTPSSLASSFSRP---PSSTAVVRSVSVLRRVIEGHKRQDLVGGGGGLAQLTAFFLRVMDYRNDVAVWEGRTKAEAKRSRLEEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVALVLRLNEEELRPLFLHVAHWKKAGEGEREGGRERGRGS--RRLVFYRLVGHLVETLRGIFVPYFGYIWGD---------IQADLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKCFQYDDEEEGEGGREGGFLSQSRFEGILPYVVGLISDLKPLXXXXXXXXXXXXXXXXSVARGKLI-PCLAHMALAVGKDVLWKPYHHQVLMKTRDKDWEVRFVALQAVKETFMCVGEEYLAMLPESIAYLSELMEDEREEVVVLCKETIGYIEDLSGESLESYL 2762 S L G A V + +LLS+PSFVA+ QELL H D +R +AL++F ++ EGG RLS GEE L +EM+P L L +G+ GR G + D GEG EE GG G A+ +QTA SL VL LG + +F + + + G G+ G G + + +SA L A+ C LG A P+LP F PA+ XXXXXXX +P+FL+P+L R+L ++ + P+ + A S + L LL+T + RLL+P + Y + + ++ R ++ ++ ++ G ++ L QLT + +D+R A G T + + L E ++V LV+RL+E ELRPLFLH+ W KAG EG + G+ RRL FYR++ L L+ IF PYF ++ D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L +CFQ D GF++++RFE +LP VV + XXXXXXX + +L+ PCLA +A A GKD LWK + VLMKTR + VR AL ++++ F VGEE+LA+LPE + +LSEL+ED EV C+ + YIE + GES+ESYL Sbjct: 2049 SSLQGLAYAVFETLQSLLSVPSFVAVTQELLLHQDPHLRRKALRMFTRRLDPAEGGGSGGAPRLSPGEESLFVEMVPSLRLVAMGKRSVGRAGEDDDDIGEGIEEVMGPSSPEGGEGGPDAMDQDRDEDGMKESAVNRQTALLSLDVLARVLGRRHQGAFEGVLGDVTEMVAGVGPGALPAVGQPGSDGIL--PLRASAFLLVATLCAVLGVRAFPRLPRFFPAMLEALEFQTPFTTAVTDGAAXXXXXXXGRSLLWTSALSAVATVAASLPSFLSPYLGRIL-AVALRPASAGAGSSGSPAAAGSKQAADRVLSLLSTGVEARLLVPAVCGAYSGCVESVKAGEEEGVGAAGRSIARLLAYVQEIVAGLEK---AAASAALPQLTRLLTQALDFRRQHA--SGSTPQVRESAALVETE-------------------------ASSALVGLVMRLSEVELRPLFLHLCEW-KAGVSSGEGDLKATLGALDRRLSFYRVLDGLAGALKSIFTPYFAHVLTDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSDEEIGEGNDGEGEDTPELRWRRSAASRLVLSALRRCFQSD---------RSGFVNKTRFELVLPAVVAQLECGSDFSAAXXXXXXXDDVSSCRLHAEELVGPCLAQLASASGKDALWKALANAVLMKTRSRRAGVRVAALVSLRQCFEVVGEEFLALLPECLPFLSELLEDGHPEVESECRALVKYIEGVLGESIESYL 2778 HSP 2 Score: 102.1 bits (253), Expect = 2.900e-17 Identity = 79/272 (29.04%), Postives = 126/272 (46.32%), Query Frame = 0 Query: 33 RPSLLFDSKEAADIDTYTIHQLACDGLALLTEREPRLTPFRSTLLSDESQSLVRELQTREANHQLDAAMIKCLRLLSP-FADQEAAIQVIEYLIRKYQVQSHCVDPLLKCFLPYHDLPIFTRVVMLLRLDGYPQGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPILARAALVRHCLKETGFLSLVLLTTQDAWQHSTLPNHPRLASLYSALLLETLEKMGPVTEQGMRVLLPPLLRAVKAKTAPFEFKLASYMALSKLASTTSFSPTAAG 304 +PSLL +AA++D ++ + A GL L + +PF+ TL S E++ +R+LQT+E+N ++D ++ L LLSP FA +EA +EYLIR Y+V + VD +++C LP+HD F R+V LL L G L L +A +L S Y+A ++E L +G ++ +R L+P ++ + A +P E+++ASYM LS L+ S G Sbjct: 30 KPSLLLTPDQAAEVDLSSVRETAVMGLQRLEAVDQDFSPFQDTLFSKEAEGTLRDLQTKESNDRIDKSISAFLALLSPHFACREAHF-CLEYLIRHYKVYQYNVDAVVECCLPWHDTVAFARMVQLLSLKG--SRWEFLTPVQKTGSPLPREAIARRCARDFGLLRFLCVSARRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLFSFYAATVVEALASLGTTSDPLLRALVPTVVHGLSATKSP-EYQMASYMILSALSGKGPLSLDVTG 297
BLAST of NO20G00480 vs. NCBI_GenBank
Match: ETL46311.1 (hypothetical protein L916_03795 [Phytophthora parasitica]) HSP 1 Score: 185.3 bits (469), Expect = 2.600e-42 Identity = 218/721 (30.24%), Postives = 313/721 (43.41%), Query Frame = 0 Query: 2049 SVLHGQAGQVLQDTHALLSLPSFVAIIQELLQHDDHLIRGRALQLFHAKMGGREGGKKKRLSRGEEHLILEMLPDLLALVGRGREGGMEVDGEGEEEGVRRGGTGCSPAIQQTAWASLAVLVEGLGGGYAKSFLPLFDHLKALTEEGHKGGREGGQGQVHCQVLSSALLCAASTCHALGPLALPKLPTFVPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPNFLNPFLPRLLDSLLINPSLSF----ATVSPTLDL----LATALPPRLLLPILFATYPTPSSLASSFSRPPSSTAVVRSVSVLRRVIEGHKRQDLVGGGGGLAQLTAFFLRVMDYRNDVAVWEGRTKAEAKRSRLEEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVALVLRLNEEELRPLFLHVAHWKKAGEGEREGGRERGRGSRRLVFYRLVGHLVETLRGIFVPYFGYIWGDIQADLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKCFQYDDEEEGEGGREGGFLSQSRFEGILPYVVGLISDLKPLXXXXXXXXXXXXXXXXSVARGKLIPCLAHMALAVGKDVLWKPYHHQVLMKTRDKDWEVRFVALQAVKETFMCVGEEYLAMLPESIAYLSELMEDEREEVVVLCKETIGYIEDLSGESLESYL 2762 S+L + ++L LLS P FVA+I ELL HD+ L+R +A+QLF+ ++ ++ LS GE L ++ML +L A++ + EG E V QTA S+ +L + K F + + ++ + + A +C +S C A+GP+ P LP F P + +P FL P+LP ++ +LL LS A V ++D L + R LLP LF Y +L S T+V R SV+ V+ + + L FF+ +D R A +K LEE E +V +L+L+E++L+PLFL +A W + G + G SRR+ F +L+ L E LRGIFVPY+ ++ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L CF +D++ GF+ + RF+ +L +V ++ L+ + PCLA++A A D+LWKP H+ VLMKTR + VR AL V++ + +G+E+LAMLPESI +L+ELMED +EV C I IED+SGESL+ YL Sbjct: 1474 SLLASDSMEILGALQQLLSTPGFVAVISELLHHDNSLVRKKAMQLFNERL----QDERDSLSSGEALLFIDMLDELDAIL---------QNPEGSENSVN----------IQTALLSVDILARNFATNHTKRFQQILPTIVKYVDQD-----VVNSSPMTLHLFGCAFVCLSSICRAVGPVVFPLLPKFFPKL------------LSGFEYCSSTNGVSGTKAVLQCLLAALEVFTDKIPQFLGPYLPAVIRALLTPSLLSSAPGNAEVLMSVDCCFLNLCNHVELRQLLPTLFGAYEHVLTL-------KSDTSVTRLFSVVGTVVNDLESSAI---RKHLPSFARFFVTALDARRVHA---------SKLQDLEEVEE-----------------------EVLECLVQFILKLSEKQLKPLFLKLAEWAQTRVG---SSGKSGDISRRISFSKLIVKLSERLRGIFVPYYAHV-------LEFLTSALRESRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLGVSSTVDVKIERERNTQLLTTVVRALDGCFVHDND---------GFMEKDRFDVVLTPLVDVLDVLQ------------YDASMREFVLETVAPCLANLAWAAKSDLLWKPLHYSVLMKTRGDNALVRLAALVTVEKCYQVIGDEFLAMLPESIPFLAELMEDTNDEVEKTCHRVIKQIEDISGESLDQYL 2081
BLAST of NO20G00480 vs. NCBI_GenBank
Match: ETP22840.1 (hypothetical protein F441_03944 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 185.3 bits (469), Expect = 2.600e-42 Identity = 218/721 (30.24%), Postives = 313/721 (43.41%), Query Frame = 0 Query: 2049 SVLHGQAGQVLQDTHALLSLPSFVAIIQELLQHDDHLIRGRALQLFHAKMGGREGGKKKRLSRGEEHLILEMLPDLLALVGRGREGGMEVDGEGEEEGVRRGGTGCSPAIQQTAWASLAVLVEGLGGGYAKSFLPLFDHLKALTEEGHKGGREGGQGQVHCQVLSSALLCAASTCHALGPLALPKLPTFVPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPNFLNPFLPRLLDSLLINPSLSF----ATVSPTLDL----LATALPPRLLLPILFATYPTPSSLASSFSRPPSSTAVVRSVSVLRRVIEGHKRQDLVGGGGGLAQLTAFFLRVMDYRNDVAVWEGRTKAEAKRSRLEEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVALVLRLNEEELRPLFLHVAHWKKAGEGEREGGRERGRGSRRLVFYRLVGHLVETLRGIFVPYFGYIWGDIQADLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKCFQYDDEEEGEGGREGGFLSQSRFEGILPYVVGLISDLKPLXXXXXXXXXXXXXXXXSVARGKLIPCLAHMALAVGKDVLWKPYHHQVLMKTRDKDWEVRFVALQAVKETFMCVGEEYLAMLPESIAYLSELMEDEREEVVVLCKETIGYIEDLSGESLESYL 2762 S+L + ++L LLS P FVA+I ELL HD+ L+R +A+QLF+ ++ ++ LS GE L ++ML +L A++ + EG E V QTA S+ +L + K F + + ++ + + A +C +S C A+GP+ P LP F P + +P FL P+LP ++ +LL LS A V ++D L + R LLP LF Y +L S T+V R SV+ V+ + + L FF+ +D R A +K LEE E +V +L+L+E++L+PLFL +A W + G + G SRR+ F +L+ L E LRGIFVPY+ ++ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L CF +D++ GF+ + RF+ +L +V ++ L+ + PCLA++A A D+LWKP H+ VLMKTR + VR AL V++ + +G+E+LAMLPESI +L+ELMED +EV C I IED+SGESL+ YL Sbjct: 1474 SLLASDSMEILGALQQLLSTPGFVAVISELLHHDNSLVRKKAMQLFNERL----QDERDSLSSGEALLFIDMLDELDAIL---------QNPEGSENSVN----------IQTALLSVDILARNFATNHTKRFQQILPTIVKYVDQD-----VVNSSPMTLHLFGCAFVCLSSICRAVGPVVFPLLPKFFPKL------------LSGFEYCSSTNGVSGTKAVLQCLLAALEVFTDKIPQFLGPYLPAVIRALLTPSLLSSAPGNAEVLMSVDCCFLNLCNHVELRQLLPTLFGAYEHVLTL-------KSDTSVTRLFSVVGTVVNDLESSAI---RKHLPSFARFFVTALDARRVHA---------SKLQDLEEVEE-----------------------EVLECLVQFILKLSEKQLKPLFLKLAEWAQTRVG---SSGKSGDISRRISFSKLIVKLSERLRGIFVPYYAHV-------LEFLTSALRESRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLGVSSTVDVKIERERNTQLLTTVVRALDGCFVHDND---------GFMEKDRFDVVLTPLVDVLDVLQ------------YDASMREFVLETVAPCLANLAWAAKSDLLWKPLHYSVLMKTRGDNALVRLAALVTVEKCYQVIGDEFLAMLPESIPFLAELMEDTNDEVEKTCHRVIKQIEDISGESLDQYL 2081
BLAST of NO20G00480 vs. NCBI_GenBank
Match: XP_005853818.1 (U3 small nucleolar RNA-associated protein 10, partial [Nannochloropsis gaditana CCMP526] >EKU22544.1 U3 small nucleolar RNA-associated protein 10, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 183.7 bits (465), Expect = 7.600e-42 Identity = 93/161 (57.76%), Postives = 108/161 (67.08%), Query Frame = 0 Query: 1 MVSSLNQQLAXXXXXXXXXXXXXXXXXXXXXXRPSLLFDSKEAADIDTYTIHQLACDGLALLTEREPRLTPFRSTLLSDESQSLVRELQTREANHQLDAAMIKCLRLLSPFADQEAAIQVIEYLIRKYQVQSHCVDPLLKCFLPYHDLPIFTRVVMLLRLD 162 M S+L+QQLA RPS+LFD KEAAD+DT+T+HQLAC+GL L EPRL PFRSTL SDESQS VRELQTRE N QLDA++ CL LSPF +E +V EYL+R+Y V +HC LL CFLPYHD P+F RVV LLRLD Sbjct: 1 MASTLSQQLAAVRAAGVATSSGIQATRRGGQQRPSILFDGKEAADVDTFTVHQLACEGLERLAAHEPRLGPFRSTLFSDESQSFVRELQTREVNQQLDASLQTCLLYLSPFVGEEDGARVAEYLVRRYAVHAHCAPALLTCFLPYHDRPVFHRVVRLLRLD 161
BLAST of NO20G00480 vs. NCBI_GenBank
Match: ETI53047.1 (hypothetical protein F443_03962 [Phytophthora parasitica P1569]) HSP 1 Score: 183.7 bits (465), Expect = 7.600e-42 Identity = 217/721 (30.10%), Postives = 313/721 (43.41%), Query Frame = 0 Query: 2049 SVLHGQAGQVLQDTHALLSLPSFVAIIQELLQHDDHLIRGRALQLFHAKMGGREGGKKKRLSRGEEHLILEMLPDLLALVGRGREGGMEVDGEGEEEGVRRGGTGCSPAIQQTAWASLAVLVEGLGGGYAKSFLPLFDHLKALTEEGHKGGREGGQGQVHCQVLSSALLCAASTCHALGPLALPKLPTFVPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPNFLNPFLPRLLDSLLINPSLSF----ATVSPTLDL----LATALPPRLLLPILFATYPTPSSLASSFSRPPSSTAVVRSVSVLRRVIEGHKRQDLVGGGGGLAQLTAFFLRVMDYRNDVAVWEGRTKAEAKRSRLEEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVALVLRLNEEELRPLFLHVAHWKKAGEGEREGGRERGRGSRRLVFYRLVGHLVETLRGIFVPYFGYIWGDIQADLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKCFQYDDEEEGEGGREGGFLSQSRFEGILPYVVGLISDLKPLXXXXXXXXXXXXXXXXSVARGKLIPCLAHMALAVGKDVLWKPYHHQVLMKTRDKDWEVRFVALQAVKETFMCVGEEYLAMLPESIAYLSELMEDEREEVVVLCKETIGYIEDLSGESLESYL 2762 S+L + ++L LLS P FVA+I ELL HD+ L+R +A+QLF+ ++ ++ LS GE L ++ML +L A++ + EG E V QTA S+ +L + K F + + ++ + + A +C +S C A+GP+ P LP F P + +P FL P+LP ++ +LL LS A V ++D L + R LLP LF Y +L S T+V R SV+ V+ + + L FF+ +D R A +K LEE E +V +L+L+E++L+PLFL +A W + G + G SRR+ F +L+ L E LRGIFVPY+ ++ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L CF +D++ GF+ + RF+ +L +V ++ L+ + PCLA++A A D+LWKP H+ VLMK+R + VR AL V++ + +G+E+LAMLPESI +L+ELMED +EV C I IED+SGESL+ YL Sbjct: 1474 SLLASDSMEILGALQQLLSTPGFVAVISELLHHDNSLVRKKAMQLFNERL----QDERDSLSSGEALLFIDMLDELDAIL---------QNPEGSENSVN----------IQTALLSVDILARNFATNHTKRFQQILPTIVKYVDQD-----VVNSSPMTLHLFGCAFVCLSSICRAVGPVVFPLLPKFFPKL------------LSGFEYCSSTNGVSGTKAVLQCLLAALEVFTDKIPQFLGPYLPAVIRALLTPSLLSSAPGNAEVLMSVDCCFLNLCNHVELRQLLPTLFGAYEHVLTL-------KSDTSVTRLFSVVGTVVNDLESSAI---RKHLPSFARFFVTALDARRVHA---------SKLQDLEEVEE-----------------------EVLECLVQFILKLSEKQLKPLFLKLAEWAQTRVG---SSGKSGDISRRISFSKLIVKLSERLRGIFVPYYAHV-------LEFLTSALRESRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLGVSSTVDVKIERERNTQLLTTVVRALDGCFVHDND---------GFMEKDRFDVVLTPLVDVLDVLQ------------YDASMREFVLETVAPCLANLAWAAKSDLLWKPLHYSVLMKSRGDNALVRLAALVTVEKCYQVIGDEFLAMLPESIPFLAELMEDTNDEVEKTCHRVIKQIEDISGESLDQYL 2081
BLAST of NO20G00480 vs. NCBI_GenBank
Match: ETK92888.1 (hypothetical protein L915_03853 [Phytophthora parasitica]) HSP 1 Score: 183.7 bits (465), Expect = 7.600e-42 Identity = 217/721 (30.10%), Postives = 313/721 (43.41%), Query Frame = 0 Query: 2049 SVLHGQAGQVLQDTHALLSLPSFVAIIQELLQHDDHLIRGRALQLFHAKMGGREGGKKKRLSRGEEHLILEMLPDLLALVGRGREGGMEVDGEGEEEGVRRGGTGCSPAIQQTAWASLAVLVEGLGGGYAKSFLPLFDHLKALTEEGHKGGREGGQGQVHCQVLSSALLCAASTCHALGPLALPKLPTFVPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPNFLNPFLPRLLDSLLINPSLSF----ATVSPTLDL----LATALPPRLLLPILFATYPTPSSLASSFSRPPSSTAVVRSVSVLRRVIEGHKRQDLVGGGGGLAQLTAFFLRVMDYRNDVAVWEGRTKAEAKRSRLEEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVALVLRLNEEELRPLFLHVAHWKKAGEGEREGGRERGRGSRRLVFYRLVGHLVETLRGIFVPYFGYIWGDIQADLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKCFQYDDEEEGEGGREGGFLSQSRFEGILPYVVGLISDLKPLXXXXXXXXXXXXXXXXSVARGKLIPCLAHMALAVGKDVLWKPYHHQVLMKTRDKDWEVRFVALQAVKETFMCVGEEYLAMLPESIAYLSELMEDEREEVVVLCKETIGYIEDLSGESLESYL 2762 S+L + ++L LLS P FVA+I ELL HD+ L+R +A+QLF+ ++ ++ LS GE L ++ML +L A++ + EG E V QTA S+ +L + K F + + ++ + + A +C +S C A+GP+ P LP F P + +P FL P+LP ++ +LL LS A V ++D L + R LLP LF Y +L S T+V R SV+ V+ + + L FF+ +D R A +K LEE E +V +L+L+E++L+PLFL +A W + G + G SRR+ F +L+ L E LRGIFVPY+ ++ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L CF +D++ GF+ + RF+ +L +V ++ L+ + PCLA++A A D+LWKP H+ VLMK+R + VR AL V++ + +G+E+LAMLPESI +L+ELMED +EV C I IED+SGESL+ YL Sbjct: 1474 SLLASDSMEILGALQQLLSTPGFVAVISELLHHDNSLVRKKAMQLFNERL----QDERDSLSSGEALLFIDMLDELDAIL---------QNPEGSENSVN----------IQTALLSVDILARNFATNHTKRFQQILPTIVKYVDQD-----VVNSSPMTLHLFGCAFVCLSSICRAVGPVVFPLLPKFFPKL------------LSGFEYCSSTNGVSGTKAVLQCLLAALEVFTDKIPQFLGPYLPAVIRALLTPSLLSSAPGNAEVLMSVDCCFLNLCNHVELRQLLPTLFGAYEHVLTL-------KSDTSVTRLFSVVGTVVNDLESSAI---RKHLPSFARFFVTALDARRVHA---------SKLQDLEEVEE-----------------------EVLECLVQFILKLSEKQLKPLFLKLAEWAQTRVG---SSGKSGDISRRISFSKLIVKLSERLRGIFVPYYAHV-------LEFLTSALRESRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLGVSSTVDVKIERERNTQLLTTVVRALDGCFVHDND---------GFMEKDRFDVVLTPLVDVLDVLQ------------YDASMREFVLETVAPCLANLAWAAKSDLLWKPLHYSVLMKSRGDNALVRLAALVTVEKCYQVIGDEFLAMLPESIPFLAELMEDTNDEVEKTCHRVIKQIEDISGESLDQYL 2081
BLAST of NO20G00480 vs. NCBI_GenBank
Match: ETL99465.1 (hypothetical protein L917_03707 [Phytophthora parasitica]) HSP 1 Score: 183.7 bits (465), Expect = 7.600e-42 Identity = 217/721 (30.10%), Postives = 313/721 (43.41%), Query Frame = 0 Query: 2049 SVLHGQAGQVLQDTHALLSLPSFVAIIQELLQHDDHLIRGRALQLFHAKMGGREGGKKKRLSRGEEHLILEMLPDLLALVGRGREGGMEVDGEGEEEGVRRGGTGCSPAIQQTAWASLAVLVEGLGGGYAKSFLPLFDHLKALTEEGHKGGREGGQGQVHCQVLSSALLCAASTCHALGPLALPKLPTFVPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPNFLNPFLPRLLDSLLINPSLSF----ATVSPTLDL----LATALPPRLLLPILFATYPTPSSLASSFSRPPSSTAVVRSVSVLRRVIEGHKRQDLVGGGGGLAQLTAFFLRVMDYRNDVAVWEGRTKAEAKRSRLEEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVALVLRLNEEELRPLFLHVAHWKKAGEGEREGGRERGRGSRRLVFYRLVGHLVETLRGIFVPYFGYIWGDIQADLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKCFQYDDEEEGEGGREGGFLSQSRFEGILPYVVGLISDLKPLXXXXXXXXXXXXXXXXSVARGKLIPCLAHMALAVGKDVLWKPYHHQVLMKTRDKDWEVRFVALQAVKETFMCVGEEYLAMLPESIAYLSELMEDEREEVVVLCKETIGYIEDLSGESLESYL 2762 S+L + ++L LLS P FVA+I ELL HD+ L+R +A+QLF+ ++ ++ LS GE L ++ML +L A++ + EG E V QTA S+ +L + K F + + ++ + + A +C +S C A+GP+ P LP F P + +P FL P+LP ++ +LL LS A V ++D L + R LLP LF Y +L S T+V R SV+ V+ + + L FF+ +D R A +K LEE E +V +L+L+E++L+PLFL +A W + G + G SRR+ F +L+ L E LRGIFVPY+ ++ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L CF +D++ GF+ + RF+ +L +V ++ L+ + PCLA++A A D+LWKP H+ VLMK+R + VR AL V++ + +G+E+LAMLPESI +L+ELMED +EV C I IED+SGESL+ YL Sbjct: 1474 SLLASDSMEILGALQQLLSTPGFVAVISELLHHDNSLVRKKAMQLFNERL----QDERDSLSSGEALLFIDMLDELDAIL---------QNPEGSENSVN----------IQTALLSVDILARNFATNHTKRFQQILPTIVKYVDQD-----VVNSSPMTLHLFGCAFVCLSSICRAVGPVVFPLLPKFFPKL------------LSGFEYCSSTNGVSGTKAVLQCLLAALEVFTDKIPQFLGPYLPAVIRALLTPSLLSSAPGNAEVLMSVDCCFLNLCNHVELRQLLPTLFGAYEHVLTL-------KSDTSVTRLFSVVGTVVNDLESSAI---RKHLPSFARFFVTALDARRVHA---------SKLQDLEEVEE-----------------------EVLECLVQFILKLSEKQLKPLFLKLAEWAQTRVG---SSGKSGDISRRISFSKLIVKLSERLRGIFVPYYAHV-------LEFLTSALRESRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLGVSSTVDVKIERERNTQLLTTVVRALDGCFVHDND---------GFMEKDRFDVVLTPLVDVLDVLQ------------YDASMREFVLETVAPCLANLAWAAKSDLLWKPLHYSVLMKSRGDNALVRLAALVTVEKCYQVIGDEFLAMLPESIPFLAELMEDTNDEVEKTCHRVIKQIEDISGESLDQYL 2081
BLAST of NO20G00480 vs. NCBI_GenBank
Match: ETM52619.1 (hypothetical protein L914_03811 [Phytophthora parasitica]) HSP 1 Score: 183.7 bits (465), Expect = 7.600e-42 Identity = 217/721 (30.10%), Postives = 313/721 (43.41%), Query Frame = 0 Query: 2049 SVLHGQAGQVLQDTHALLSLPSFVAIIQELLQHDDHLIRGRALQLFHAKMGGREGGKKKRLSRGEEHLILEMLPDLLALVGRGREGGMEVDGEGEEEGVRRGGTGCSPAIQQTAWASLAVLVEGLGGGYAKSFLPLFDHLKALTEEGHKGGREGGQGQVHCQVLSSALLCAASTCHALGPLALPKLPTFVPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPNFLNPFLPRLLDSLLINPSLSF----ATVSPTLDL----LATALPPRLLLPILFATYPTPSSLASSFSRPPSSTAVVRSVSVLRRVIEGHKRQDLVGGGGGLAQLTAFFLRVMDYRNDVAVWEGRTKAEAKRSRLEEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVALVLRLNEEELRPLFLHVAHWKKAGEGEREGGRERGRGSRRLVFYRLVGHLVETLRGIFVPYFGYIWGDIQADLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKCFQYDDEEEGEGGREGGFLSQSRFEGILPYVVGLISDLKPLXXXXXXXXXXXXXXXXSVARGKLIPCLAHMALAVGKDVLWKPYHHQVLMKTRDKDWEVRFVALQAVKETFMCVGEEYLAMLPESIAYLSELMEDEREEVVVLCKETIGYIEDLSGESLESYL 2762 S+L + ++L LLS P FVA+I ELL HD+ L+R +A+QLF+ ++ ++ LS GE L ++ML +L A++ + EG E V QTA S+ +L + K F + + ++ + + A +C +S C A+GP+ P LP F P + +P FL P+LP ++ +LL LS A V ++D L + R LLP LF Y +L S T+V R SV+ V+ + + L FF+ +D R A +K LEE E +V +L+L+E++L+PLFL +A W + G + G SRR+ F +L+ L E LRGIFVPY+ ++ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L CF +D++ GF+ + RF+ +L +V ++ L+ + PCLA++A A D+LWKP H+ VLMK+R + VR AL V++ + +G+E+LAMLPESI +L+ELMED +EV C I IED+SGESL+ YL Sbjct: 1474 SLLASDSMEILGALQQLLSTPGFVAVISELLHHDNSLVRKKAMQLFNERL----QDERDSLSSGEALLFIDMLDELDAIL---------QNPEGSENSVN----------IQTALLSVDILARNFATNHTKRFQQILPTIVKYVDQD-----VVNSSPMTLHLFGCAFVCLSSICRAVGPVVFPLLPKFFPKL------------LSGFEYCSSTNGVSGTKAVLQCLLAALEVFTDKIPQFLGPYLPAVIRALLTPSLLSSAPGNAEVLMSVDCCFLNLCNHVELRQLLPTLFGAYEHVLTL-------KSDTSVTRLFSVVGTVVNDLESSAI---RKHLPSFARFFVTALDARRVHA---------SKLQDLEEVEE-----------------------EVLECLVQFILKLSEKQLKPLFLKLAEWAQTRVG---SSGKSGDISRRISFSKLIVKLSERLRGIFVPYYAHV-------LEFLTSALRESRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLGVSSTVDVKIERERNTQLLTTVVRALDGCFVHDND---------GFMEKDRFDVVLTPLVDVLDVLQ------------YDASMREFVLETVAPCLANLAWAAKSDLLWKPLHYSVLMKSRGDNALVRLAALVTVEKCYQVIGDEFLAMLPESIPFLAELMEDTNDEVEKTCHRVIKQIEDISGESLDQYL 2081 The following BLAST results are available for this feature:
BLAST of NO20G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00480 ID=NO20G00480|Name=NO20G00480|organism=Nannochloropsis oceanica|type=gene|length=10076bpback to top protein sequence of NO20G00480.1 >NO20G00480.1-protein ID=NO20G00480.1-protein|Name=NO20G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2763bpback to top Synonyms
Publications
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