NO20G00460, NO20G00460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00460 vs. NCBI_GenBank
Match: EWM22160.1 (hypothetical protein Naga_100064g29 [Nannochloropsis gaditana]) HSP 1 Score: 212.6 bits (540), Expect = 1.500e-51 Identity = 106/164 (64.63%), Postives = 124/164 (75.61%), Query Frame = 0 Query: 13 TRRPTHSCLSFFSSGS-----SEDAYLESWQQKQIQPPSFYEQEALKRHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQIRRNDTGLHTSYPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVYAGNLQQEFDPSSVYISSRSG 172 T R + C SF +S S SEDAYL+ W +KQI+ +FYE+E L+R YFYTVDLQGRLYLEES VKN+TSCLKDDKFLNFFFRQIRRNDTGLH SYPF+SPCGKEMN++LPADMPVVFHD + G E G G+ LV+ G LQQ FDPS V++ +G Sbjct: 30 THRISCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPA-LSGNEKSGDRGD-CLVFGGGLQQRFDPSRVHLRRGAG 191
BLAST of NO20G00460 vs. NCBI_GenBank
Match: XP_005853816.1 (hypothetical protein NGA_0443110, partial [Nannochloropsis gaditana CCMP526] >EKU22542.1 hypothetical protein NGA_0443110, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 208.0 bits (528), Expect = 3.800e-50 Identity = 104/155 (67.10%), Postives = 119/155 (76.77%), Query Frame = 0 Query: 13 TRRPTHSCLSFFSSGS-----SEDAYLESWQQKQIQPPSFYEQEALKRHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQIRRNDTGLHTSYPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVYAGNLQQEFDPS 163 T R + C SF +S S SEDAYL+ W +KQI+ +FYE+E L+R YFYTVDLQGRLYLEES VKN+TSCLKDDKFLNFFFRQIRRNDTGLH SYPF+SPCGKEMN++LPADMPVVFHD + G E G G+ LV+ G LQQ FDPS Sbjct: 6 TPRLSCPCTSFSTSSSSPAPGSEDAYLDEWMRKQIKSFAFYEEEGLQRRYFYTVDLQGRLYLEESPVKNMTSCLKDDKFLNFFFRQIRRNDTGLHPSYPFVSPCGKEMNYLLPADMPVVFHDLLPA-LSGNEKSGDRGD-CLVFGGGLQQRFDPS 158
BLAST of NO20G00460 vs. NCBI_GenBank
Match: GBG29258.1 (UPF0598 protein C8orf82-like [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 144.1 bits (362), Expect = 6.700e-31 Identity = 81/207 (39.13%), Postives = 114/207 (55.07%), Query Frame = 0 Query: 26 SGSSEDAYLESWQQKQIQPPSFYEQEALKRHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQIRRNDTGLHTSYPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVYAGNLQQEFDPSSVYISSRSGRLYHPLNTTKKXXXXXXXXXGLEGKEGERDGGRGGGRPRFGLVRSHVGLLLSDRLVHTEED 233 + +E Y E Q+ QI+ P FY++ A +R YFY VDL GRLYLE+ KN+ + LK KFLNFFF ++R N+ G YPF+SPCGKEMN+I PAD P+VF E K+G+ L YA ++++ FDPS + ++ + RLY+P+ K+ +G R LVRSH+ + LS V +D Sbjct: 15 NADAEPRYAEELQKAQIKEPEFYDRLAEERKYFYHVDLLGRLYLEDMLPKNIATSLKSPKFLNFFFTRLRPNELGEFEEYPFVSPCGKEMNYIRPADTPIVFDKL--------EKDEKDGKEYLYYAADMKEPFDPSLLEWAADTDRLYYPVRNHKR-------------MKGHR-----------ALVRSHLAVQLSQNFVLDGDD 189
BLAST of NO20G00460 vs. NCBI_GenBank
Match: GAX17431.1 (hypothetical protein FisN_5Hu079 [Fistulifera solaris]) HSP 1 Score: 133.7 bits (335), Expect = 9.000e-28 Identity = 82/235 (34.89%), Postives = 124/235 (52.77%), Query Frame = 0 Query: 26 SGSSEDAYLESWQQKQIQPPSFYEQEALK---RHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQI-----------RRNDTGLHTSYPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVYAGNLQQEFDPSSVYISSRSGRLYHPLNTTKKXXXXXXXXXGLEGKEGERDGGRGGGRPRFGLVRSHVGLLLSDRLVHTEE------DEGGLVLMW 241 S S++ AY++ W I+ PSFY+ A R YFY +DL GRL+LEE+ KN+ + +KD++FL+ FF +I ++ + +H YPF+SPCG+E+NFI PA P+VFH + L++AGN +Q FDP+++ IS R+GRLYH + L G +D P + LVRS V + LSDR++ ++ D+ L + W Sbjct: 38 SFSTQTAYIDEWFASIIKRPSFYQVLANSEPVRCYFYNIDLYGRLFLEETMPKNIATSIKDERFLDLFFGRIQKPTEKHQELMKQKEIPIH-DYPFVSPCGRELNFIRPAATPLVFHSI--------------EKEHLIFAGNKRQLFDPANLAISERTGRLYHQVTN-----------MSLRGDTTSKDA------PEYALVRSAVAVSLSDRIILHDDCLSFQLDDKALPIEW 240
BLAST of NO20G00460 vs. NCBI_GenBank
Match: XP_008896954.1 (hypothetical protein PPTG_05200 [Phytophthora parasitica INRA-310] >ETI34432.1 hypothetical protein F443_19086 [Phytophthora parasitica P1569] >ETK74781.1 hypothetical protein L915_18511 [Phytophthora parasitica] >ETL28208.1 hypothetical protein L916_18411 [Phytophthora parasitica] >ETL81466.1 hypothetical protein L917_18240 [Phytophthora parasitica] >ETM34661.1 hypothetical protein L914_18324 [Phytophthora parasitica] >ETN17387.1 hypothetical protein PPTG_05200 [Phytophthora parasitica INRA-310] >ETO63223.1 hypothetical protein F444_19039 [Phytophthora parasitica P1976] >ETP04331.1 hypothetical protein F441_18895 [Phytophthora parasitica CJ01A1] >ETP32467.1 hypothetical protein F442_18867 [Phytophthora parasitica P10297] >KUF94621.1 hypothetical protein AM587_10012225 [Phytophthora nicotianae]) HSP 1 Score: 132.1 bits (331), Expect = 2.600e-27 Identity = 80/185 (43.24%), Postives = 103/185 (55.68%), Query Frame = 0 Query: 4 ALGLVLRSPTRRPTHSCLSFFSSGSSEDAYLESWQQKQIQPPSFYEQEALKRHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQIRRNDTGLHTS--------YPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVY-AGNLQQEFDPSSVYISSRSGRLYHPLNT 180 AL L LR RR + F + + ED YLE Q K I+ FY+++A KR YFY +DLQGRL+LE++R KN+ + LK KFL FFF Q+R N S YPF SPCGKEMNFI AD P V+ D + + G+ LV+ G L F P ++ IS +GRLYH + T Sbjct: 2 ALSLYLRRHWRRVPNGLRGFCT--ADEDKYLELKQLKDIKSEEFYDRQAHKRRYFYYIDLQGRLFLEDTRPKNIATSLKSAKFLRFFFSQVRPNGLAQCKSKEEEDFLEYPFRSPCGKEMNFIKCADRPFVYEDLRRDE--------RSGKWTLVFGGGELTMPFLPETLRISLSTGRLYHDVQT 176
BLAST of NO20G00460 vs. NCBI_GenBank
Match: XP_002185243.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43375.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 131.3 bits (329), Expect = 4.500e-27 Identity = 101/293 (34.47%), Postives = 139/293 (47.44%), Query Frame = 0 Query: 9 LRSPTRRPTHSCLSFFSSGSSEDA--YLESWQQKQIQPPSFYEQEAL-----KRHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQIRR----NDTGLH------TSYPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVYAGNLQQEFDPSSVYISSRSGRLYHPLNTTKKXXXXXXXXXGLEGKEGERDGGRGGGRPRFGLVRSHVGLLLSDRLVHTEEDE----------GGLVLMWGRVGGKEDRNDGEEEGFIVRMLPEEDEP-VWGMP 274 L P R T +FF+S A Y++ W + I+P SFY++ + R YFY+VDLQGRL+LEE+ KN+ + +KD KFL+FFFR++RR T LH YPF+S CG E NFI PA P+VFH + +E L +AGNL + F+ ++ IS +SGRLYH L T LE + L+RS V + LS+ + EE+E GL + G+ G + + LP E EP W MP Sbjct: 61 LLHPLRAQTR---AFFASVPCRSATHYIDEWFAETIKPKSFYQKHSKATSSNNRCYFYSVDLQGRLFLEETLPKNIATSIKDTKFLDFFFRRVRRISPEQATFLHERNISWKEYPFVSVCGVEKNFIRPAATPIVFHSLISDDSE------------LSFAGNLVEPFNVENLAISPKSGRLYHRL-TKPVPKSKTSQVLCLE----------------YALIRSAVAVQLSEIMEPLEEEEHISDSDSKSYSGLQIQLGKGGYQR-----------IPWLPVEYEPGDWAMP 310
BLAST of NO20G00460 vs. NCBI_GenBank
Match: ORX97189.1 (hypothetical protein K493DRAFT_314163 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 126.3 bits (316), Expect = 1.400e-25 Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = 0 Query: 55 RHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQIRRNDTGLHTSYPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVYAGNLQQEFDPSSVYISSRSGRLYHP 177 R YFY +D+ G+L+LE+++ KN T+C KD +FL+FFF+++R NDTG + YP++SPCGKE+N+IL D P+VF D +GE LV+AG+ + F P + +SS SGR+YHP Sbjct: 33 REYFYHIDVHGQLFLEDTKPKNFTTCFKDKRFLDFFFQRLRVNDTGRNEQYPYVSPCGKELNYILSEDAPIVFSDL-------------DGE-QLVWAGDKRFLFHPEKILVSSTSGRIYHP 140
BLAST of NO20G00460 vs. NCBI_GenBank
Match: XP_009822478.1 (hypothetical protein H257_01122, partial [Aphanomyces astaci] >ETV87615.1 hypothetical protein H257_01122, partial [Aphanomyces astaci]) HSP 1 Score: 125.2 bits (313), Expect = 3.200e-25 Identity = 79/213 (37.09%), Postives = 106/213 (49.77%), Query Frame = 0 Query: 33 YLESWQQKQIQPPSFYEQEALKRHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQIR-----RNDTGLHTSYPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVYAGNLQQEFDPSSVYISSRSGRLYHPLNTTKKXXXXXXXXXGLEGKEGERDGGRGGGRPRFGLVRSHVGLLLSDRLVHTEEDEGGLVLMW 241 Y E Q K+I+ P FY+ A R+YFY VDLQG+L+LE++ KN+ + LK KFL FFF Q+R N L YP+ISPCG EMN+I AD PVVF + Q + +G LV + EF PS+V +S + RLYH + T FGL++SHV + +S + D+G VL W Sbjct: 24 YAEQLQLKEIKSPEFYDLHAHDRNYFYHVDLQGQLFLEDTVPKNIATSLKSRKFLRFFFGQLRPNPHHANTQSLFHDYPYISPCGSEMNYIKAADTPVVFTELKQPDCD-------DGTWTLVTNAGHEVEFHPSNVAMSPATNRLYHWIQTKHLSL--------------------------FGLLKSHVAVEVSQFI--DFHDDGHHVLTW 201
BLAST of NO20G00460 vs. NCBI_GenBank
Match: XP_009517795.1 (hypothetical protein PHYSODRAFT_466776 [Phytophthora sojae] >EGZ30520.1 hypothetical protein PHYSODRAFT_466776 [Phytophthora sojae]) HSP 1 Score: 124.8 bits (312), Expect = 4.200e-25 Identity = 74/160 (46.25%), Postives = 89/160 (55.62%), Query Frame = 0 Query: 28 SSEDAYLESWQQKQIQPPSFYEQEALKRHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQIRRNDTGLHTS--------YPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVYAGNLQQEFDPSSVYISSRSGRLYHPLNT 180 + ED YLE Q K I+ FYE + KR YFY VDLQGRL+LE++R KN+ + LK KFL FFF Q + N S YPF SPCGKEMNFI AD P VF D + +D K T + G L F P S+ IS +GRLYH + T Sbjct: 26 ADEDKYLELKQLKDIKSDEFYELQGQKRRYFYYVDLQGRLFLEDTRPKNIATSLKSAKFLRFFFSQAQPNTVAKCRSEEEHEFLEYPFRSPCGKEMNFIKCADRPFVFEDLRR------DDSDK--WTLMFGGGELTMPFVPESLRISLSTGRLYHDVKT 177
BLAST of NO20G00460 vs. NCBI_GenBank
Match: OWZ14032.1 (putative mitochondrial protein [Phytophthora megakarya]) HSP 1 Score: 124.0 bits (310), Expect = 7.200e-25 Identity = 73/161 (45.34%), Postives = 91/161 (56.52%), Query Frame = 0 Query: 28 SSEDAYLESWQQKQIQPPSFYEQEALKRHYFYTVDLQGRLYLEESRVKNLTSCLKDDKFLNFFFRQIRRN--------DTGLHTSYPFISPCGKEMNFILPADMPVVFHDFVQGPTEGGEDGGKEGETALVY-AGNLQQEFDPSSVYISSRSGRLYHPLNT 180 + ED YLE Q K I+ FY+ +A KR YFY VDLQGRL+LE++R KN+ + LK KFL FFF Q+R N + YP SPCGKEMNFI AD P VF D + K + ALV+ G L F P ++ IS +GRLYH + T Sbjct: 27 ADEDKYLELKQLKDIKSEGFYDLQAHKRRYFYYVDLQGRLFLEDTRPKNIATSLKSAKFLRFFFSQVRPNGIAQCKAKEEEEFLEYPHRSPCGKEMNFIKCADRPFVFEDLRR---------DKNDKWALVFGGGELTMPFLPETLRISLSTGRLYHDVQT 178 The following BLAST results are available for this feature:
BLAST of NO20G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00460 ID=NO20G00460|Name=NO20G00460|organism=Nannochloropsis oceanica|type=gene|length=1318bpback to top protein sequence of NO20G00460.1 >NO20G00460.1-protein ID=NO20G00460.1-protein|Name=NO20G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=276bpback to top Synonyms
Publications
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