NO20G00430, NO20G00430 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00430 vs. NCBI_GenBank
Match: XP_005854508.1 (rwp-rk domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU21852.1 rwp-rk domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 141.0 bits (354), Expect = 2.500e-29 Identity = 103/254 (40.55%), Postives = 134/254 (52.76%), Query Frame = 0
Query: 628 AGRVAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLKLAAENXXXXXXXXXXXXXXXXXXXDSVEEGRLLRQIKVLEARREELITHSANPGSTQPPGIE-EGGKEGRGLCLELTSPCSRRMQSPTVGL----------SCSFSSSSLTGPLPPAASGTSGQKNKRKGLEGASCGRSXXXXXXXXWKRGGDIGEDVGGGKGGTWREGGNKPRASSTTSMMNLLALDSPS 871
+ R K+++L ELR YFD+PIE+AARA+G+CSTLLKKICR+YHIKRWPYRQVKSLDRT+ECLK+A D EE RL +QI+VLEAR+ ELI S GS P +E E EG+G E + R Q P+ S+ S P P + T+G +KRK +G G D DV G + G RA STTSM++L++++SP+
Sbjct: 320 SSRSLKSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTT---------ARASAGQPGHDPKEEARLCQQIRVLEARKVELIESSTTLGSV-PLAVEGEDSTEGKGRRTEGGAEDGRSFQLPSPAFLAWSEGPSPPHAPLSAPSPIAPWTPVGATTTG-GHKRKCSDGVGDGEGSRHRDATP-DESTDDTNDVNNKSSGDF--GHGLARAPSTTSMLHLMSINSPT 559
BLAST of NO20G00430 vs. NCBI_GenBank
Match: EWM22148.1 (rwp-rk domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 141.0 bits (354), Expect = 2.500e-29 Identity = 101/253 (39.92%), Postives = 131/253 (51.78%), Query Frame = 0
Query: 628 AGRVAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLKLAAENXXXXXXXXXXXXXXXXXXXDSVEEGRLLRQIKVLEARREELITHSANPGSTQPPGIEEGGKEGRGLCLELTSPCSRRMQSPTVGL----------SCSFSSSSLTGPLPPAASGTSGQKNKRKGLEGASCGRSXXXXXXXXWKRGGDIGEDVGGGKGGTWREGGNKPRASSTTSMMNLLALDSPS 871
+ R K+++L ELR YFD+PIE+AARA+G+CSTLLKKICR+YHIKRWPYRQVKSLDRT+ECLK+A D EE RL +QI+VLEAR+ ELI S GS E EG+G E + R Q P+ S+ S P P + T+G +KRK +G G D DV G + G RA STTSM++L++++SP+
Sbjct: 383 SSRSLKSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTT---------ARASAGQPGHDPKEEARLCQQIRVLEARKVELIESSTTLGSVPVAMEGEDSTEGKGRRTEGGAEDGRSFQLPSPAFLAWSEGPSPPHAPLSAPSPIAPWTPVGATTTG-GHKRKCSDGVGDGEGSRHRDATP-DESTDDTNDVNNKSSGDF--GHGLARAPSTTSMLHLMSINSPT 622
BLAST of NO20G00430 vs. NCBI_GenBank
Match: GAX95267.1 (Hypothetical protein PINS_003139 [Pythium insidiosum]) HSP 1 Score: 84.7 bits (208), Expect = 2.100e-12 Identity = 35/65 (53.85%), Postives = 51/65 (78.46%), Query Frame = 0
Query: 631 VAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLKLAAEN 696
++K + ++ELR +F KPI + AR G+C+T LKKICR+ IKRWP+RQ++SL+RTIE L+ A +N
Sbjct: 112 LSKELNIEELRAHFGKPIVDVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIEMLRQAEKN 176
BLAST of NO20G00430 vs. NCBI_GenBank
Match: CCA24539.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA25972.1 conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 83.2 bits (204), Expect = 6.200e-12 Identity = 54/162 (33.33%), Postives = 77/162 (47.53%), Query Frame = 0
Query: 631 VAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLKLAAENXXXXXXXXXXXXXXXXXXXDSVEEGRLLRQIKVLEARREELITHSANPGSTQPPGIEEGGKEGRGLCLELTSPCSRRMQSPTVGLSCSFSSSSLTGP 793
+ K ++LDELR +FD+PI E A+ G+C TL+KKICR+ IKRWP+RQ++SL ++I L+ A + E R QI L RRE +IT Q P +E + C + S ++GLS S S+ P
Sbjct: 108 LTKQISLDELRAHFDRPIIEVAKKFGICITLMKKICRRNGIKRWPHRQIRSLTKSIAALEAA------------------MLSANETELERYQDQIMNLRRRRESVITDPNKISMAQAPWDQEYSFLKKTDCRSQAPSPIQTASSTSIGLSTGESRSNPVSP 251
BLAST of NO20G00430 vs. NCBI_GenBank
Match: OWY99177.1 (putative extracellular protein [Phytophthora megakarya]) HSP 1 Score: 82.0 bits (201), Expect = 1.400e-11 Identity = 34/60 (56.67%), Postives = 49/60 (81.67%), Query Frame = 0
Query: 631 VAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLK 691
+++ +TL+ELR +F +PI E AR G+C+T LKKICR+ IKRWP+RQ++SL+RTIE L+
Sbjct: 63 LSRELTLEELRPHFGRPIVEVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIEMLE 122
BLAST of NO20G00430 vs. NCBI_GenBank
Match: POM62357.1 (hypothetical protein PHPALM_28506 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 82.0 bits (201), Expect = 1.400e-11 Identity = 34/60 (56.67%), Postives = 49/60 (81.67%), Query Frame = 0
Query: 631 VAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLK 691
+++ +TL+ELR +F +PI E AR G+C+T LKKICR+ IKRWP+RQ++SL+RTIE L+
Sbjct: 83 LSRELTLEELRPHFGRPIVEVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIEMLE 142
BLAST of NO20G00430 vs. NCBI_GenBank
Match: CCA16441.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 81.3 bits (199), Expect = 2.400e-11 Identity = 33/65 (50.77%), Postives = 52/65 (80.00%), Query Frame = 0
Query: 631 VAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLKLAAEN 696
+++++ L +LR +F+KPI + AR +G+C+T LK+ICR+ IKRWP+RQ++SL RTI+ LK A +N
Sbjct: 62 ISRDIGLSDLRPHFNKPIVQVARELGICTTFLKRICRRCGIKRWPHRQIRSLLRTIDMLKKAQDN 126
BLAST of NO20G00430 vs. NCBI_GenBank
Match: XP_024576040.1 (Predicted E3 ubiquitin ligase [Plasmopara halstedii] >CEG39671.1 Predicted E3 ubiquitin ligase [Plasmopara halstedii]) HSP 1 Score: 81.3 bits (199), Expect = 2.400e-11 Identity = 33/60 (55.00%), Postives = 50/60 (83.33%), Query Frame = 0
Query: 631 VAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLK 691
+++ +TL++LR +F +PI + ARA G+C+T LKKICR+ IKRWP+RQ++SL+RTIE L+
Sbjct: 75 LSRELTLEKLRPHFGRPIVDVARAFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIEMLE 134
BLAST of NO20G00430 vs. NCBI_GenBank
Match: XP_008902896.1 (hypothetical protein PPTG_09630 [Phytophthora parasitica INRA-310] >ETI51138.1 hypothetical protein F443_05458 [Phytophthora parasitica P1569] >ETL97611.1 hypothetical protein L917_05152 [Phytophthora parasitica] >ETN11974.1 hypothetical protein PPTG_09630 [Phytophthora parasitica INRA-310] >ETP48853.1 hypothetical protein F442_05506 [Phytophthora parasitica P10297] >KUF92389.1 RKD1 protein [Phytophthora nicotianae]) HSP 1 Score: 80.9 bits (198), Expect = 3.100e-11 Identity = 33/60 (55.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query: 631 VAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLK 691
+++ +TL+ELR +F +PI E AR G+C+T LKKICR+ IKRWP+RQ++SL+RTI+ L+
Sbjct: 83 LSRELTLEELRPHFGRPIVEVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIQMLE 142
BLAST of NO20G00430 vs. NCBI_GenBank
Match: ETK91038.1 (hypothetical protein L915_05314 [Phytophthora parasitica]) HSP 1 Score: 80.9 bits (198), Expect = 3.100e-11 Identity = 33/60 (55.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query: 631 VAKNMTLDELREYFDKPIEEAARAIGVCSTLLKKICRKYHIKRWPYRQVKSLDRTIECLK 691
+++ +TL+ELR +F +PI E AR G+C+T LKKICR+ IKRWP+RQ++SL+RTI+ L+
Sbjct: 83 LSRELTLEELRPHFGRPIVEVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIQMLE 142 The following BLAST results are available for this feature:
BLAST of NO20G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00430 ID=NO20G00430|Name=NO20G00430|organism=Nannochloropsis oceanica|type=gene|length=3966bpback to top protein sequence of NO20G00430.1 >NO20G00430.1-protein ID=NO20G00430.1-protein|Name=NO20G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1233bpback to top Synonyms
Publications
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