NO20G00420, NO20G00420 (gene) Nannochloropsis oceanica

Overview
NameNO20G00420
Unique NameNO20G00420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4351
Alignment locationchr20:139141..143491 +

Link to JBrowse

Properties
Property NameValue
Description1-deoxy-D-xylulose-5-phosphate synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:139141..143491 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0016114terpenoid biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00086611-deoxy-D-xylulose-5-phosphate synthase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR009014Transketo_C/Pyr-ferredox_oxred
IPR029061THDP-binding
IPR033248Transketolase_C
IPR005477Dxylulose-5-P_synthase
IPR005475Transketolase-like_Pyr-bd
Homology
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BLAST of NO20G00420 vs. NCBI_GenBank
Match: XP_005854509.1 (1-deoxy-D-xylulose-5-phosphate synthase [Nannochloropsis gaditana CCMP526] >EKU21853.1 1-deoxy-D-xylulose-5-phosphate synthase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1256.9 bits (3251), Expect = 0.000e+0
Identity = 620/680 (91.18%), Postives = 652/680 (95.88%), Query Frame = 0 
Query:  169 PPGTGPYKGPSSFPLLDSVRYPHDMKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGYVGLQEIPKRGKAVTRGKGRLINYRGDGPAPAAPAV-KVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHIVEKAAGLVQGAKD 848
            PPGTGPY+GPSSFPLLDSVRYPHDMKRFD+K+LKQLAHELRWDTL HVSKTGGHLGSSLGVIELTVALHYVFNTPDDRI WDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSIS+ALGMSVGKLLTNKRVNNC+AVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSE+QD+NAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDL+NLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAE ASDKYHGVAKFD+STG+QFKGGNKG P SLTTTFANALCEIA EDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQV+HDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDE+ELMNLLETAYETNDLPSVVRYPRGAGYGLE L+ ELGY GL+E+PKRGKAV RGKGR+I      P+ AAP   +V LLSVGTRLLDTV AA+EIE+++PGVSVTVADARFVKPLDKEM++SLA E+DVLIT+EENSVGGFGSFVQQFLL EGL+DGG+LRLRSMVLPD+FIEAGPQSDQYDQAGLAA HIVEK  GLV+G ++
Sbjct:  107 PPGTGPYQGPSSFPLLDSVRYPHDMKRFDLKDLKQLAHELRWDTLHHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRIVWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISAALGMSVGKLLTNKRVNNCVAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSEIQDINAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLDNLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEVASDKYHGVAKFDVSTGRQFKGGNKGAPLSLTTTFANALCEIAAEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVIHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDELELMNLLETAYETNDLPSVVRYPRGAGYGLETLKSELGYEGLEELPKRGKAVARGKGRIIRRSAVVPSTAAPGTCRVALLSVGTRLLDTVHAAKEIEENLPGVSVTVADARFVKPLDKEMVSSLAMEHDVLITVEENSVGGFGSFVQQFLLNEGLLDGGKLRLRSMVLPDRFIEAGPQSDQYDQAGLAARHIVEKVEGLVRGREE 786
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BLAST of NO20G00420 vs. NCBI_GenBank
Match: EWM22144.1 (1-deoxy-d-xylulose 5-phosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 1253.8 bits (3243), Expect = 0.000e+0
Identity = 619/680 (91.03%), Postives = 651/680 (95.74%), Query Frame = 0 
Query:  169 PPGTGPYKGPSSFPLLDSVRYPHDMKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGYVGLQEIPKRGKAVTRGKGRLINYRGDGPAPAAPAV-KVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHIVEKAAGLVQGAKD 848
            PPGTGPY+GPSSFPLLDSVRYPHDMKRFD+K+LKQLAHELRWDTL HVSKTGGHLGSSLGVIELTVALHYVFNTPDDRI WDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSIS+ALGMSVGKLLTNKRVNNC+AVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSE+QD+NAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDL+NLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAE ASDKYHGVAKFD+STG+QFKGGNKG P SLTTTFANALCEIA EDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQV+HDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDE+ELMNLLETAYETNDLPSVVRYPRGAGYGLE L+ ELGY  L+E+PKRGKAV RGKGR+I      P+ AAP   +V LLSVGTRLLDTV AA+EIE+++PGVSVTVADARFVKPLDKEM++SLA E+DVLIT+EENSVGGFGSFVQQFLL EGL+DGG+LRLRSMVLPD+FIEAGPQSDQYDQAGLAA HIVEK  GLV+G ++
Sbjct:  107 PPGTGPYQGPSSFPLLDSVRYPHDMKRFDLKDLKQLAHELRWDTLHHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRIVWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISAALGMSVGKLLTNKRVNNCVAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSEIQDINAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLDNLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEVASDKYHGVAKFDVSTGRQFKGGNKGAPLSLTTTFANALCEIAAEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVIHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDELELMNLLETAYETNDLPSVVRYPRGAGYGLETLKSELGYEWLEELPKRGKAVARGKGRIIRRSAVVPSTAAPGTCRVALLSVGTRLLDTVHAAKEIEENLPGVSVTVADARFVKPLDKEMVSSLAMEHDVLITVEENSVGGFGSFVQQFLLNEGLLDGGKLRLRSMVLPDRFIEAGPQSDQYDQAGLAARHIVEKVEGLVRGREE 786
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BLAST of NO20G00420 vs. NCBI_GenBank
Match: CBJ28110.1 (1-deoxy-D-xylulose 5-phosphate synthase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 948.3 bits (2450), Expect = 1.700e-272
Identity = 477/696 (68.53%), Postives = 559/696 (80.32%), Query Frame = 0 
Query:  175 YKGPSSFPLLDSVRYPHDMKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGYVGLQEIPKRGKAVTRGKGRLINYRGDGPAPAAPA-VKVGLLSVGTRLLDTVKAAREIEKSM-----------------------------------PGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHI 835
            Y GP+S PLLDSV  P DMKRF + ELKQLA+ELRW+TL  VSKTGGHLGSSLGVIELTVALHYVF  P+D+I WDVSHQVYPHKILTGRRDRMHSLRQ+ GLSGFAKRSESE+D FGAGHSSTSISSA+GMSVGK   +KR NNC+AVIGDGAITGGMAFEA+N AGYL  R +VILNDNGQVSLPTGTHSAGGVVPAGALSSYT RL+SS+ F+  R  AK  N+L+PS +Q++NAK+DEYARG++ GGTLFEELG+YY+GPVDGHDL NLVPILEN+RD    KPVLLH++TEKG GYPPA AASDKYHGVAKF+++TGKQ KG +    PSLT+ FAN L +IATEDR+VVGITAAMPGGTGMD+FG+RFPKRT+DVGIAEQHAVTFAAGMA+EGLKPFCC+YSTFMQR YDQV+HDVV+QKLPVRMILDRAGLVGNDGPTHHGSFDL+YLG LP IVIMAPSDE+ELMN+++TAY  +D PSVVRYPRG GYGLE LR   GY  L E+P +G+ V  GKGR++        P A A  K  +LS+GTRL  +++AA ++E S                                    P + VTVADARF+KPLD ++I  LA E+D ++T+EEN+VGGFG+ V  F++ +GL+D G L++R MVLPD FIEAG Q++QY++AGL+A HI
Sbjct:   84 YYGPTSKPLLDSVHSPADMKRFTIAELKQLAYELRWETLEAVSKTGGHLGSSLGVIELTVALHYVFEAPEDKITWDVSHQVYPHKILTGRRDRMHSLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGGTLFEELGYYYVGPVDGHDLANLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFNVATGKQHKGTSAN--PSLTSVFANTLIDIATEDRSVVGITAAMPGGTGMDMFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCVYSTFMQRAYDQVMHDVVVQKLPVRMILDRAGLVGNDGPTHHGSFDLTYLGTLPHIVIMAPSDEIELMNMIQTAYAIDDKPSVVRYPRGTGYGLEKLRSLFGY-ELDEMPAKGEEVEIGKGRIVR------RPRATARQKAVILSLGTRLAPSLEAAIQLEDSFFLVGIGTPECPEGGGGGACGVEGNGGAEQSQAADNPDMGVTVADARFMKPLDVDLIRRLAGEHDAMLTVEENAVGGFGAHVLHFMVLDGLVDDGNLKMRPMVLPDTFIEAGTQTEQYEEAGLSAGHI 770
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BLAST of NO20G00420 vs. NCBI_GenBank
Match: XP_009042014.1 (hypothetical protein AURANDRAFT_59650 [Aureococcus anophagefferens] >EGB03297.1 hypothetical protein AURANDRAFT_59650 [Aureococcus anophagefferens])

HSP 1 Score: 933.7 bits (2412), Expect = 4.200e-268
Identity = 468/659 (71.02%), Postives = 541/659 (82.09%), Query Frame = 0 
Query:  193 MKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGG--NKGGPP---SLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGYVGLQEIPKRGKAVTRGKGRLINYRGDGPAPAAPAVKVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHIVEKAAGLVQGAK 847
            MK+F + ELKQLAHELRWD +  VSKTGGHL SSLGV+ELT ALHYVF+ P+DRI WDVSHQ YPHKILTGRR RM +LRQ +GLSGF KR+ESEYDAFGAGHSSTSIS+ALGMSVGK    +  NNCIAVIGDGAITGGMAFEA+NNA YL++RM+ +LNDNGQVSLPTGT SAGGV+P+GALS+YTSRL+SSKPF DFR  AKG++ L PSE+Q +NAK+DEYARG++ GGTLFEELGFYYIGPVDGHDLENLVPILENLRD+PS KPVLLH+KTEKGYGY PA  ASDK HGVAKFD++TGKQFKG     G PP   SLTT FAN LC +A +DR V+GITAAMPGGTGMDIFG+RFPKRT+DVGIAEQHAVTFAAG+A+EGLKPFCCIYSTFMQRGYDQ+VHDVVIQ LPVR ILDRAGLVGNDGPTHHGSFDL+YLG +P +VIMAP++EV+L N++ TAY  +D PS VRYPRG GYGLE L  +L  +GL E+P+ G+ +  GKGR+I   G    P A   KV +LS+GTRL    +AA+E+E     V+VTVADARF+KPLD +++  LA+ENDVLITIEENSV GFG +V  FL  +G +D G L++R MVLPD FIE   Q  QY+ AGL A HIV  AA L+  AK
Sbjct:    1 MKKFSIAELKQLAHELRWDVIRAVSKTGGHLSSSLGVVELTTALHYVFDAPEDRIMWDVSHQCYPHKILTGRRSRMGTLRQQDGLSGFQKRAESEYDAFGAGHSSTSISAALGMSVGKSQKGRAQNNCIAVIGDGAITGGMAFEAMNNANYLQARMITVLNDNGQVSLPTGTPSAGGVIPSGALSAYTSRLISSKPFADFRQVAKGISSLFPSEIQAINAKIDEYARGIVTGGTLFEELGFYYIGPVDGHDLENLVPILENLRDTPSNKPVLLHIKTEKGYGYAPAMQASDKMHGVAKFDVATGKQFKGAPPAPGAPPKPASLTTIFANELCRLAEKDRDVIGITAAMPGGTGMDIFGRRFPKRTYDVGIAEQHAVTFAAGLAVEGLKPFCCIYSTFMQRGYDQLVHDVVIQDLPVRFILDRAGLVGNDGPTHHGSFDLTYLGCMPGLVIMAPAEEVDLRNMIATAYAIDDKPSCVRYPRGTGYGLEKL-NDLFDLGLTEVPEAGEVLPVGKGRIIK-DGVKGRPGANK-KVAILSLGTRLAAAAEAAKELEGEYDDVAVTVADARFMKPLDIDLVRKLAKENDVLITIEENSVLGFGDYVLHFLALDGALDDGNLKVRPMVLPDAFIETATQFQQYEAAGLNAKHIVGTAAKLLDRAK 656
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BLAST of NO20G00420 vs. NCBI_GenBank
Match: XP_002176386.1 (precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase [Phaeodactylum tricornutum CCAP 1055/1] >EEC42622.1 precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 925.6 bits (2391), Expect = 1.100e-265
Identity = 456/672 (67.86%), Postives = 540/672 (80.36%), Query Frame = 0 
Query:  171 GTG-PYKGPSSFPLLDSVRYPHDMKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGYV-GLQEIPKRGKAVTRGKGRLI------NYRGDGPAPAAPAVKVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHI 835
            G+G P+ GP+  P+LDSV+YP DMK  DM++LKQLA+ELRW+ L  VSKTGGHL SSLGV ELTVALHYVF+ P+D I WDVSHQ YPHKILTGRRDRM +LRQ+ G+SGF KR ESEYD+FGAGHSSTSIS A GMS+GK + NKR NNCIAVIGDGAITGGMA+EA+N+AGYL++RM+VILNDNGQVSLPTGT SAGG+VPA  LS+YTS LL SKPFQDFR FAK  N+L+P  +QD+N ++DEYARG++ GGTLFEELGF+Y+GPVDGHDL+NL+PILE LRDSPSTKPVLLHVKT KGYGYPPAE ASD+ HGVAKF+L TGKQ K   K   PSLT+ FANAL + ATEDR++VGITAAMPGGTGMDIFG+RFPKRTFDVGIAEQHAVT  AGMA EGLKPF CIYSTFMQRGYDQVVHDV IQ LPVRM+LDRAGLVGNDGPTHHG +DLSY+G +P+++IMAPSDEVEL N++ T    ND P+V+RYPRG GYGLE L+   GY     EIP +G+ +  GKGR++      N         +   +V +LS+GTRL + + AA+E+E   P + VTVAD RF+KPLD +++  LA E+ VLITIEE S+GGFG  V  FL  +G++D G L+ R MV+PD   EAG Q +QY+QAGL + HI
Sbjct:   42 GSGPPFSGPAVKPILDSVKYPSDMKNLDMRQLKQLANELRWEVLESVSKTGGHLSSSLGVNELTVALHYVFDMPEDDIIWDVSHQCYPHKILTGRRDRMSTLRQSGGISGFCKRKESEYDSFGAGHSSTSISVAQGMSIGKSILNKRQNNCIAVIGDGAITGGMAYEAMNSAGYLKNRMIVILNDNGQVSLPTGTPSAGGIVPASQLSTYTSNLLVSKPFQDFRMFAKNFNKLLPEGVQDVNKRIDEYARGIVAGGTLFEELGFFYVGPVDGHDLDNLIPILEKLRDSPSTKPVLLHVKTTKGYGYPPAEQASDRMHGVAKFNLGTGKQIK-SKKPIAPSLTSIFANALIDAATEDRSIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAEQHAVTMGAGMACEGLKPFVCIYSTFMQRGYDQVVHDVAIQNLPVRMVLDRAGLVGNDGPTHHGCYDLSYMGCIPNLIIMAPSDEVELRNMVATQAAFNDGPTVLRYPRGTGYGLETLKNTFGYTFEGDEIPTKGEVLPIGKGRIVRRPGGFNQNQSSTRGKSRKDRVAVLSLGTRLHEALVAAKEVEDIDPTLGVTVADGRFMKPLDVDLVRELADEHSVLITIEEGSIGGFGDHVLHFLSLDGILDDGELKFRPMVIPDTLFEAGTQYEQYEQAGLNSEHI 712
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BLAST of NO20G00420 vs. NCBI_GenBank
Match: XP_002295769.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64486.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 919.5 bits (2375), Expect = 8.200e-264
Identity = 449/682 (65.84%), Postives = 536/682 (78.59%), Query Frame = 0 
Query:  174 PYKGPSSFPLLDSVRYPHDMKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGY-VGLQEIPKRGKAVTRGKGRLI--------------------NYRGDGPAPAAPAVKVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHI 835
            PY GP+S P+LD+V YPHDMKR DMKELKQLAHELRW+ +  VSKTGGH  SSLGVIELTVALHYVF+ P+D I WDV+HQ YPHK+LTGRRDR  +LRQ  G+SGF KR ESEYD+FGAGHSSTSIS+A GMSV K L NKR NNCIAVIGDGAITGGMA+EA+NNAGYL SRM+V+LNDNGQVSLPTGT +AGGV PA  LS+YTS L+ SKPFQDFR FAK LNRL P  +QD+N +LDEYARGL+ GGT+FEELGF+Y+GP+DGHDL+N+VPILE LRDS STKPVLLH+KT KG GYPPA AASDK HGV KFD++TG Q KG  K   PSLT+ FANA+ + ATEDR +VGITAAMPGGTGMDIFG+RFPKRT+DVGIAEQHAVTFAAGMA EGLKPFCCIYSTFMQRGYDQVVHDV IQ LPVRMILDRAG+VGNDGPTHHG +DL+YLG +P++ IM+PSDE+EL N++ T    +D P+V+RYPRG GYG E L+   GY +   E+P +G+ +  GKGR+I                    +  G G        ++ +L++GTRL + + AA EIE + P ++VTVADARF+KPLD+++I  L+  N +++T+EE S+GGFG  V  FL  +G +D G L+ R MVLPD + EA  Q +QY+ AGL +HHI
Sbjct:   46 PYSGPASKPILDTVNYPHDMKRLDMKELKQLAHELRWELIEAVSKTGGHFSSSLGVIELTVALHYVFDMPEDDIIWDVAHQCYPHKMLTGRRDRFPTLRQLGGISGFCKRKESEYDSFGAGHSSTSISAAQGMSVAKSLLNKRKNNCIAVIGDGAITGGMAYEAMNNAGYLSSRMIVVLNDNGQVSLPTGTQTAGGVRPASQLSAYTSNLIVSKPFQDFRDFAKSLNRLFPENVQDVNKRLDEYARGLVTGGTVFEELGFFYVGPIDGHDLDNMVPILEKLRDSDSTKPVLLHIKTNKGQGYPPALAASDKMHGVGKFDIATGIQVKG--KAASPSLTSIFANAMIDAATEDRAIVGITAAMPGGTGMDIFGRRFPKRTYDVGIAEQHAVTFAAGMACEGLKPFCCIYSTFMQRGYDQVVHDVAIQNLPVRMILDRAGVVGNDGPTHHGCYDLAYLGCIPNLTIMSPSDEIELKNMVMTCAAFDDGPTVLRYPRGVGYGAEKLQNLFGYELENGEVPAKGEVIKIGKGRIIRRPGGIHALKEELTANGSSDSRMGAGSRGLLKENRIAILTLGTRLSEALVAADEIEGANPDLAVTVADARFMKPLDEDLIRELSDNNGIIVTVEEGSIGGFGDHVLHFLSLDGALDDGELKFRPMVLPDTYFEAATQYEQYEMAGLNSHHI 725
[Close]
BLAST of NO20G00420 vs. NCBI_GenBank
Match: EJK67229.1 (hypothetical protein THAOC_11764 [Thalassiosira oceanica])

HSP 1 Score: 904.4 bits (2336), Expect = 2.700e-259
Identity = 448/697 (64.28%), Postives = 539/697 (77.33%), Query Frame = 0 
Query:  178 PSSFPLLDSVRYPHDMKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGYVGLQ--EIPKRGKAVTRGKGRLINYRGD----GPAPAAPA------------------VKVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHIVEKAAGLVQGAKDGKI 851
            P S P+LDSV +PHDMKR DM+EL+QLAHELRW+ +  VS+TGGH  SSLGVIELT+ALHYVF+ P+D I WDV+HQ YPHK+LTGRRDR  +LRQ +G+SGF KR ESEYD+FGAGHSSTSIS+A GMSV K L  KR NNCIAVIGDGAITGGMA+EA+N+AGYL SRM+V+LNDNGQVSLPTGT SAGGV PA  LS+YTS LL SKPFQDFR FAK LN+L P  +QD+N ++DEYARG++ GGTLFEELGF+Y+GP+DGHDLEN+VPILE LRDS S KPVLLH+KT KGYGY PA  ASD+ HGV KFD+ TG QFKG  K   PS T+ FANAL + ATE R +VGITAAMPGGTGMDIFG+RFPKRTFDVGIAEQHAVTFAAGMA EGLKPFCCIYSTFMQRGYDQVVHDV IQ LPVRMILDRAG+VGNDGPTHHG +DL+Y+G +P++ IM+PSDE+EL N++ TA + ++ P V+RYPRG GY  + L+   GY  LQ  E+P +G A+  GKGR+I   G         A PA                   +V +LS+G+RL + + AA E+E+S P ++VTVADARF+KPLDK+++ SLA +N V++T+EE SVGGFG  V  FL  EG +D G LR R MV+PD + E   Q +QY+ AGL A HI ++ A L + +   ++
Sbjct:   51 PLSKPILDSVTFPHDMKRLDMRELQQLAHELRWEVIESVSQTGGHFSSSLGVIELTIALHYVFDMPEDDIIWDVAHQCYPHKMLTGRRDRFPTLRQLDGMSGFCKRKESEYDSFGAGHSSTSISAAQGMSVAKSLLQKRRNNCIAVIGDGAITGGMAYEAMNSAGYLTSRMIVVLNDNGQVSLPTGTQSAGGVKPASQLSAYTSNLLVSKPFQDFRDFAKSLNKLFPENVQDVNKRIDEYARGVVTGGTLFEELGFFYVGPIDGHDLENMVPILEKLRDSDSNKPVLLHLKTTKGYGYEPALKASDRMHGVGKFDIKTGIQFKG--KAAAPSFTSIFANALIDAATEHREIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAEQHAVTFAAGMACEGLKPFCCIYSTFMQRGYDQVVHDVAIQNLPVRMILDRAGVVGNDGPTHHGCYDLAYMGCIPNLTIMSPSDEIELRNMVATAADFDEGPIVLRYPRGVGYAADKLQTLFGY-DLQDGEVPTKGVAIEIGKGRIIREPGGIRTLSKPEAVPANGSTDSTIGAGSRGETRESRVAILSIGSRLSEALIAADELEESYPNLAVTVADARFMKPLDKDLVLSLAADNGVIVTVEEGSVGGFGDHVLHFLSHEGALDSGDLRFRPMVMPDTYFETATQYEQYEMAGLNARHIRDQVAKLAKTSAGAEV 744
[Close]
BLAST of NO20G00420 vs. NCBI_GenBank
Match: GAX17080.1 (1-deoxy-D-xylulose-5-phosphate synthase [Fistulifera solaris])

HSP 1 Score: 900.6 bits (2326), Expect = 4.000e-258
Identity = 447/667 (67.02%), Postives = 526/667 (78.86%), Query Frame = 0 
Query:  174 PYKGPSSFPLLDSVRYPHDMKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGY------VGLQEIPKRGKAVTRGKGRLINYRGDGPAPAAPAVKVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHI 835
            PY GP+  P+LDS+  P DMKR DM++LKQLAHELRW+TL  VSKTGGHL SSLGV ELTVALHYVF+ P+D I WDVSHQ YPHKILTGRR  M +LRQ  G+SGF KR ES YD+FGAGHSSTSIS+A GMSV K +  KR NNCIAVIGDGAITGGMA+EA+N+AGYLRSRM+VILNDNGQVSLPTGT SAGG VPA  LS+YTS LL SKPFQ+FR FAK  N+L+P +LQD+N ++DEYARG++ GGTLFEELGFYY+GPVDGHDL+N++PILE LRDS S KPVLLH+KT KGYGYPPAE ASD+ H V KF+++T  Q K   K   P+ T+ FANAL E ATEDRT+VGITAAMPGGTGMDIFG+RFPKRTFDVGIAEQHAVT AAGMA EGLKPF CIYSTFMQRGYDQVVHDV IQ LPVRM+LDRAG VGNDGPTHHG +DL+YLG +P +VIM+PSDE+EL N+++T   T+D PSV+RYPRG GYG E LR   GY       G  EIP RG+ +  GKGR++  R  G    +   +V +LS GTRL + + AA+++E+    + VTVADARF+KPLD +++  LA E+ VLIT+EE S+GGFG  V  FL  +G MD G L+ R MV+PD + EA  Q +QY+ AGL A HI
Sbjct:   42 PYVGPAVKPILDSIDSPADMKRLDMRQLKQLAHELRWETLEAVSKTGGHLSSSLGVNELTVALHYVFDMPEDDIIWDVSHQCYPHKILTGRRHSMPTLRQAGGISGFCKRKESPYDSFGAGHSSTSISAAQGMSVAKSMLGKRRNNCIAVIGDGAITGGMAYEAMNSAGYLRSRMIVILNDNGQVSLPTGTPSAGGTVPASQLSTYTSNLLVSKPFQNFRDFAKSFNKLLPEQLQDVNKRIDEYARGMVSGGTLFEELGFYYVGPVDGHDLDNMIPILEKLRDSDSNKPVLLHLKTVKGYGYPPAEQASDRLHAVGKFNVATAVQQK--TKSIAPTFTSIFANALIEAATEDRTIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAEQHAVTMAAGMACEGLKPFACIYSTFMQRGYDQVVHDVAIQNLPVRMVLDRAGFVGNDGPTHHGCYDLAYLGCIPGLVIMSPSDEIELKNMVKTQAVTDDAPSVMRYPRGTGYGAETLRTLFGYELEKNSAGEYEIP-RGQVIPIGKGRVVR-RSSGDRGKSRKDRVAILSFGTRLHEALVAAQQVEEEDESLGVTVADARFMKPLDVDLVRELADEHSVLITVEEGSIGGFGDHVLHFLTLDGQMDEGNLKFRPMVMPDAYFEAATQREQYEAAGLNARHI 704
[Close]
BLAST of NO20G00420 vs. NCBI_GenBank
Match: GAX25369.1 (1-deoxy-D-xylulose-5-phosphate synthase [Fistulifera solaris])

HSP 1 Score: 899.4 bits (2323), Expect = 8.800e-258
Identity = 446/667 (66.87%), Postives = 526/667 (78.86%), Query Frame = 0 
Query:  174 PYKGPSSFPLLDSVRYPHDMKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGY------VGLQEIPKRGKAVTRGKGRLINYRGDGPAPAAPAVKVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHI 835
            PY GP+  P+LDS+  P DMKR DM++LKQLAHELRW+TL  VSKTGGHL SSLGV ELTVALHYVF+ P+D I WDVSHQ YPHKILTGRR  M +LRQ  G+SGF KR ES YD+FGAGHSSTSIS+A GMSV K +  KR NNCIAVIGDGAITGGMA+EA+N+AGYLRSRM+VILNDNGQVSLPTGT SAGG VPA  LS+YTS LL SKPFQ+FR FAK  N+L+P +LQD+N ++DEYARG++ GGTLFEELGFYY+GPVDGHDL+N++PILE LRDS S KPVLLH+KT KGYGYPPAE ASD+ H V KF+++T  Q K   K   P+ T+ FANAL E ATEDRT+VGITAAMPGGTGMDIFG+RFPKRTFDVGIAEQHAVT AAGMA EGLKPF CIYSTFMQRGYDQVVHDV IQ LPVRM+LDRAG VGNDGPTHHG +DL+YLG +P +VIM+PSDE+EL N+++T   T+D P+V+RYPRG GYG E LR   GY       G  EIP RG+ +  GKGR++  R  G    +   +V +LS GTRL + + AA+++E+    + VTVADARF+KPLD +++  LA E+ VLIT+EE S+GGFG  V  FL  +G MD G L+ R MV+PD + EA  Q +QY+ AGL A HI
Sbjct:   67 PYVGPAVKPILDSIDSPADMKRLDMRQLKQLAHELRWETLEAVSKTGGHLSSSLGVNELTVALHYVFDMPEDDIIWDVSHQCYPHKILTGRRHSMPTLRQAGGISGFCKRKESPYDSFGAGHSSTSISAAQGMSVAKSMLGKRRNNCIAVIGDGAITGGMAYEAMNSAGYLRSRMIVILNDNGQVSLPTGTPSAGGTVPASQLSTYTSNLLVSKPFQNFRDFAKSFNKLLPEQLQDVNKRIDEYARGMVSGGTLFEELGFYYVGPVDGHDLDNMIPILEKLRDSDSNKPVLLHLKTVKGYGYPPAEQASDRLHAVGKFNVATAVQQK--TKSIAPTFTSIFANALIEAATEDRTIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAEQHAVTMAAGMACEGLKPFACIYSTFMQRGYDQVVHDVAIQNLPVRMVLDRAGFVGNDGPTHHGCYDLAYLGCIPGLVIMSPSDEIELKNMVKTQAVTDDAPTVMRYPRGTGYGAETLRTLFGYELEKNSAGEYEIP-RGQVIPIGKGRVVR-RSSGDRGKSRKDRVAILSFGTRLHEALVAAQQVEEEDESLGVTVADARFMKPLDVDLVRELADEHSVLITVEEGSIGGFGDHVLHFLTLDGQMDEGNLKFRPMVMPDAYFEAATQREQYEAAGLNARHI 729
[Close]
BLAST of NO20G00420 vs. NCBI_GenBank
Match: OEU19211.1 (1-deoxy-D-xylulose 5-phosphate synthase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 896.3 bits (2315), Expect = 7.500e-257
Identity = 437/669 (65.32%), Postives = 523/669 (78.18%), Query Frame = 0 
Query:  174 PYKGPSSFPLLDSVRYPHDMKRFDMKELKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFKGGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLLETAYETNDLPSVVRYPRGAGYGLELLRKELGY-VGLQEIPKRGKAVTRGKGRLINYRGDGPAPAAPAV-------KVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVADARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDGGRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHI 835
            PY GPS  P+LDS+ +P DMK  DM ++KQLA+ELRW+ L  VSKTGGHL SSLGV ELTVALHYVF+ PDD I WDV+HQ YPHKILTGRR +  +LRQ  G+SGF KR+ESEYD+FGAGHSSTSIS+A GMS+ K + NKR NNC+AVIGDGAITGGMA+EA+N+AGYL+SRM+V+LNDNGQVSLPTGT SAGG VPA  LS YTS LL SKPFQDFR FAK  N+L+P E+Q +N ++DEY RGL+ GGTLFEELGFYY+GP+DGHDLENL+PILE LRDSP+TKPVLLH+KT KGYGYPPAE ASD+ HGV KF+L TG Q+KG  K   PS T+ FANAL + A +DR +VGITAAMPGGTGMDIFG+RFPKRTFDVGIAEQHAV   AGMA EGLKPF CIYSTFMQRGYDQVVHDV IQ LPVRM+LDRAG VGNDGPTHHG +DL+YLG +P++ IM+PSDE+EL N++ T    +D P+V+RYPRG GYG E L+   GY +   EIP RG+ +  GKGR+I   G      + +        ++ +LS+GTRL + + AA+E+E     +SVTVADAR++KPLD +++  LA +N VLITIEE S+GGFG  V  FL  +G +D G L  R MV+PD + E G Q  QY++AGL A HI
Sbjct:   61 PYSGPSVKPILDSINFPSDMKGLDMPQIKQLANELRWEVLEAVSKTGGHLSSSLGVTELTVALHYVFDMPDDDIIWDVAHQCYPHKILTGRRSKFPTLRQQGGISGFCKRAESEYDSFGAGHSSTSISAAQGMSIAKSVLNKRRNNCVAVIGDGAITGGMAYEAMNSAGYLQSRMIVVLNDNGQVSLPTGTPSAGGTVPASQLSKYTSNLLVSKPFQDFRDFAKSFNKLLPEEMQGVNKRIDEYTRGLVSGGTLFEELGFYYVGPIDGHDLENLIPILEKLRDSPNTKPVLLHLKTVKGYGYPPAEVASDRMHGVGKFNLGTGAQYKG--KPTEPSFTSIFANALIDAAIDDRAIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAEQHAVCMGAGMACEGLKPFVCIYSTFMQRGYDQVVHDVAIQNLPVRMMLDRAGFVGNDGPTHHGCYDLAYLGCIPNLTIMSPSDEIELRNMVMTCAGFDDGPTVLRYPRGVGYGQEKLQSLFGYKLDNNEIPTRGEVIPIGKGRIIRGAGGMVESTSSSTRGKKRKDRIAILSIGTRLHEALVAAQEVEDMYDDLSVTVADARYMKPLDVDLVRQLADDNGVLITIEEGSIGGFGDHVLHFLALDGSLDDGNLTFRPMVMPDAYFETGTQFQQYEEAGLNARHI 727
The following BLAST results are available for this feature:
BLAST of NO20G00420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854509.10.000e+091.181-deoxy-D-xylulose-5-phosphate synthase [Nannochlo... [more]
EWM22144.10.000e+091.031-deoxy-d-xylulose 5-phosphate synthase [Nannochlo... [more]
CBJ28110.11.700e-27268.531-deoxy-D-xylulose 5-phosphate synthase, chloropla... [more]
XP_009042014.14.200e-26871.02hypothetical protein AURANDRAFT_59650 [Aureococcus... [more]
XP_002176386.11.100e-26567.86precursor of synthase DXS 1-deoxy-d-xylulose-5-pho... [more]
XP_002295769.18.200e-26465.84predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK67229.12.700e-25964.28hypothetical protein THAOC_11764 [Thalassiosira oc... [more]
GAX17080.14.000e-25867.021-deoxy-D-xylulose-5-phosphate synthase [Fistulife... [more]
GAX25369.18.800e-25866.871-deoxy-D-xylulose-5-phosphate synthase [Fistulife... [more]
OEU19211.17.500e-25765.321-deoxy-D-xylulose 5-phosphate synthase [Fragilari... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL024nonsL024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR068ngnoR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002598NSK002598Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00420.1NO20G00420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|530268gene_6254Nannochloropsis oceanica (N. oceanica CCMP1779)gene
DXSgene8281Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00420.1NO20G00420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00420 ID=NO20G00420|Name=NO20G00420|organism=Nannochloropsis oceanica|type=gene|length=4351bp
TCGTCGTGTCGCATGGCCTTCTGCCTCAATTTGGGATCGGAAGTGGGCTG
GGAGGCGAGCTTTCTGTGTCTAGGTCGCATGACTCTGGACCACTGGGTCG
GACGCAGTTAGAATGACGTAGACATTTTCTGTGTGAGTGCGTTTAGCCTC
CTCTGTCTGCCATTACCATGGATGTGATCGCCTCCCTGATCGGTCACCAC
CGAGACGGAAGCAAGCCCCAATATCCGTGTGGCCACTTCTGTCGAAGAGA
CCTCGTGTGCCTTTGCCTCTTCGATACCTCTTCCTTTCCTTTCCCCTACA
CTTCATTATGAAACTGCCCAAATCAAAGCACACAGCACACGGCGGCCGAG
CAAGAAAGTGGATTTCGATACGTGGCGTCCCAGTGGAACGCAGAAGGGGA
TCACACCATCACCTTGCTGCGTTGTCGTCGTCGCGTGCTTGGGGCTTTGA
TCGTGGACAAACCCTCTTTTAGCGTTCTCGGACACAGCGACGACGGGTTG
GAGACGATGGTGGTCGTGATAAGAACACGGATGCGCCTTCACTCTTCATA
TTTGGCCAGACTCGACCTCGTGACGGGTGTACATGCCTCCACCCCGTCTC
GTCCACCCTACTACTGACGGACTCATGCCCCCTTTCCTTTTGCGTTGTCC
AGAGAAGGATGGAGGAAGCAATCCTCACCTTTCATGGCTATAAACGACGA
CTCTCATGACTCGAGGAGGCGGCCTTTTATTTTCAGCACCCCTTCCCACG
TGCTTACACCGTCATCCCCTTCCCCCCTCACCCATGCACAACTCCATAGG
AAAGGGGCCGGCAGTGCTGTTGCTGTTTCCCTCCCTTCAAACGCCGCCTG
TGTCGTGATGGTAGGCTTTGCTTCTCTCTCCTCCTCCTCCTCCTTCTCCT
CCTCCTCCTCCTCCTCCTCCAGCTCCAGCACAACGGCACGTACCCTCTCC
ACTGCTGTCCTGTTCCTCGCAGCAGCCTTGGCACCTTCCCCTGCTCTTGC
CTTTCACGCCCCGTCCAGGCCCTCTTCCTCTTCCTCCGTCCCGTCGTCCT
TCTCATCCTCGTCTTCGTCGGGCAGGAGACCACAGCTCTCTTCAAGTCGT
AACCGCCTCACCGTGACCATGGAAACACCCCTCGAGACCGGCACCGGCAG
CAGCGCCACCAGCAAAAGCAGCGGAGGTGGCCTCCCTCCTCCTGGAACCG
GGCCGTACAAAGGTCCTTCGTCTTTCCCCTTGCTTGACTCGGTACGATAT
CCCCACGACATGAAACGGTTCGACATGAAGGAGCTCAAGCAGCTCGCGCA
TGAGTTGAGGTGGGACACATTGGGGCACGTGTCGAAGACTGGAGGCCATT
TGGGGAGTAGCTTGGGGGTGATCGAGCTTACGGTGGCGTTGCACTACGTA
TTCAACACGCCGGACGACCGGATTTGTTGGGATGTGAGTCATCAGGTGTA
CCCACACAAGATTTTGACGGGGAGGAGGGACAGGATGCATAGCCTGAGGC
AAACAAATGGATTGAGCGGGTTCGCCAAGAGGAGCGAGAGTGAGTACGAC
GCTTTTGGCGCCGGACATTCGAGCACCTCTATCTCCTCGGCCTTGGGCAT
GAGTGTGGGGAAGTTGCTGACGAACAAGCGCGTGAACAATTGCATTGCGG
TGATTGGTGACGGGGCCATCACGGGGGGGATGGCGTTCGAGGCGCTCAAC
AATGCCGGCTATTTGAGGTCACGAATGGTGGTGATTTTAAATGATAACGG
ACAGGTGTCGCTGCCCACGGGGACGCATTCTGCCGGGGGGGTGGTGCCGG
CGGGGGCGTTGAGCAGCTATACAAGCCGGCTGTTGAGCTCGAAGCCGTTT
CAGGACTTTCGAAGCTTCGCCAAGGGTCTGAACAGGCTGATGCCGTCGGA
GTTGCAAGATCTGAACGCGAAGCTCGACGAGTACGCCCGCGGGTTAATTC
AGGGGGGGACGCTGTTCGAGGAATTGGGCTTCTATTATATCGGGCCCGTG
GATGGCCATGACTTAGAAAACCTTGTGCCGATATTGGAAAATTTGCGGGA
CTCGCCGAGCACGAAGCCGGTATTGTTGCATGTGAAGACGGAAAAGGGTT
ACGGATACCCTCCCGCAGAGGCAGCAAGCGACAAGTACCACGGTGTTGCC
AAGTTTGATTTGTCGACGGGGAAGCAGTTCAAGGGCGGGAACAAGGGAGG
ACCGCCGTCGTTGACGACGACGTTTGCGAATGCATTGTGTGAGATTGCGA
CGGAAGATAGGACGGTGGTAGGCATCACGGCGGCCATGCCCGGGGGCACC
GGCATGGATATCTTTGGTAAACGGTTTCCTAAACGTACATTTGACGTTGG
GATTGCGGAGCAGCATGCGGTTACGTTTGCGGCGGGCATGGCCATTGAAG
GCTTGAAGCCGTTTTGTTGCATCTACAGCACGTTTATGCAGCGGGGATAT
GATCAGGTGGTGCACGACGTGGTCATCCAGAAACTGCCTGTGAGGATGAT
CCTTGACCGGGCTGGGTTGGTTGGCAATGACGGCCCGACCCACCACGGAA
GCTTCGACCTGAGTTATTTGGGAGCCTTGCCTGATATTGTCATCATGGCG
CCCAGCGATGAAGTGGAGCTGATGAACCTGCTGGAGACGGCGTATGAGAC
GAACGACTTGCCGTCGGTGGTAAGGTACCCGAGGGGGGCGGGCTATGGAC
TGGAGCTTTTGAGGAAGGAGCTTGGGTATGTAGGGTTGCAGGAGATTCCC
AAGAGGGGCAAGGCGGTGACACGGGGCAAAGGACGGCTGATTAATTATCG
CGGTGATGGGCCTGCGCCTGCTGCGCCTGCGGTGAAGGTGGGGTTACTGT
CGGTGGGGACGCGCTTGTTGGATACGGTGAAAGCGGCCAGGGAGATTGAA
AAGAGCATGCCGGGGGTGAGTGTGACCGTAGCGGACGCACGCTTTGTGAA
ACCGCTGGATAAGGAGATGATTGCGTCCTTGGCTCGGGAGAACGATGTGC
TGATCACAATTGAAGAGAACAGCGTGGGGGGCTTTGGATCTTTTGTGCAG
CAATTCCTGCTGGAGGAGGGCTTGATGGATGGAGGGAGGCTGAGGTTACG
GTCCATGGTGTTGCCTGATAAATTTATTGAGGCCGGTCCTCAGAGTGATC
AGTACGACCAGGCCGGTTTGGCTGCCCATCATATAGTCGAAAAGGCCGCG
GGGCTCGTGCAAGGGGCGAAGGATGGGAAGATTCTCCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGACCGCCTGCGGTGGTTC
CAGCGGCAGCAGGGGTAGGAATGGGGAAAAGCAGTAGGCAGGGGACATCT
TTCCAGGTGTTACCTTGAAGAATGGAGGGAGGAAGGACGAAGTAAATTTG
GAACCGAGAGGAATAAATGTCGTCGGGTCACATTTTGTCGGTGTGATTGG
TTGGATAGAGTGTGTGAGTGAGTGACCTTTGCGTATCTCATGCATGCGAA
TATATGTTTGTCATTTTGATATATTCCTCGACCGGTTTACCTCATGATAT
TTTGTACATTTACGCAGTGGCTATTGCAACAGCAGCATCAGCAGCAGTAG
TAGTAGAAGTAGTAGCAGCAGCGGCTGTATCAGAGGGTTAAGAGCAAAAA
GTGGGGGCCAATTGAAAAGAGAATGAACGAGTGATATCACAACGTACGTA
TGTACGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTCCTAACCCTAACTCTAACCGAAGCGTGAAGCGCCAGCAA
GAGCAGGAGCAGCAACAACAGTCTTACTTCCGTAGCTCCTTATCAGAATA
TTTTCTTGATTTTTTTTTCATTTGATTAAAAAAAAGGGAAAAGGAAGAAA
AGCACCGGCGCCACACCAAGACAAGAGGCGCTGTTGTGCATTGCGTGACA
GGAGTAAAAGGAGGGATGGAACACGGCGAAGAAGCAAGATGAAGAAGGAG
AGAGGAGAAACGCCAATCCCTATAATTGTCATGACAAATGAGAAAAAGGA
GAAGGAAAAGATCAAGAAGAGAATGGAGAAGTAGAAATCTAGGAAAGAGA
GGGAGAAAAGAGGGAGCAGGTGGAGCCTACTTTCCTCCCTTCCTTCCTCC
CCAGCTCGTATTACTATGACGACCATAAAATATATGTCCGCCGGTCTTCC
TTCTTCCTCTCTCTGTGTTTTGTTTGCCCTGTCTGTGATAGGTAGGGAAA
GAAAGGGGAAAGAAGCGTAAGAAAAGATGACAAGATGACGGGTGCAGGAG
AAGGAGAAGCAACAGCAGCAGTAATTACAGCAGCAGCAGCAGCAGCAGCA
G
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protein sequence of NO20G00420.1

>NO20G00420.1-protein ID=NO20G00420.1-protein|Name=NO20G00420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=895bp
MAINDDSHDSRRRPFIFSTPSHVLTPSSPSPLTHAQLHRKGAGSAVAVSL
PSNAACVVMVGFASLSSSSSFSSSSSSSSSSSTTARTLSTAVLFLAAALA
PSPALAFHAPSRPSSSSSVPSSFSSSSSSGRRPQLSSSRNRLTVTMETPL
ETGTGSSATSKSSGGGLPPPGTGPYKGPSSFPLLDSVRYPHDMKRFDMKE
LKQLAHELRWDTLGHVSKTGGHLGSSLGVIELTVALHYVFNTPDDRICWD
VSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSI
SSALGMSVGKLLTNKRVNNCIAVIGDGAITGGMAFEALNNAGYLRSRMVV
ILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLN
RLMPSELQDLNAKLDEYARGLIQGGTLFEELGFYYIGPVDGHDLENLVPI
LENLRDSPSTKPVLLHVKTEKGYGYPPAEAASDKYHGVAKFDLSTGKQFK
GGNKGGPPSLTTTFANALCEIATEDRTVVGITAAMPGGTGMDIFGKRFPK
RTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVVHDVVIQK
LPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDEVELMNLL
ETAYETNDLPSVVRYPRGAGYGLELLRKELGYVGLQEIPKRGKAVTRGKG
RLINYRGDGPAPAAPAVKVGLLSVGTRLLDTVKAAREIEKSMPGVSVTVA
DARFVKPLDKEMIASLARENDVLITIEENSVGGFGSFVQQFLLEEGLMDG
GRLRLRSMVLPDKFIEAGPQSDQYDQAGLAAHHIVEKAAGLVQGAKDGKI
LQQQQQQQQQQQQQQQGPPAVVPAAAGVGMGKSSRQGTSFQVLP*
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Synonyms
Publications