NO20G00390, NO20G00390 (gene) Nannochloropsis oceanica

Overview
NameNO20G00390
Unique NameNO20G00390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2125
Alignment locationchr20:129176..131300 -

Link to JBrowse

Properties
Property NameValue
Description2-dehydropantoate 2-reductase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:129176..131300 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR0089276-PGluconate_DH_C-like
IPR013752KPA_reductase
IPR013332KPR_N
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Homology
BLAST of NO20G00390 vs. NCBI_GenBank
Match: EWM22153.1 (2-dehydropantoate 2-reductase [Nannochloropsis gaditana])

HSP 1 Score: 465.7 bits (1197), Expect = 1.400e-127
Identity = 245/389 (62.98%), Postives = 277/389 (71.21%), Query Frame = 0
Query:   28 QSILVLGAGAVGSLYGGRLLEAGHDVTFLMRREYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMR----------------------AARGGGRKRRXXXXXXXXXXXGDGD--FPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKDLEEKAGVKGGRIFGGMAFVCANRGPVGSGEVAHLKYGKLVIGHYEDDLHELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNVPFNGLGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIXXXXXXXXXXXXXTETVHSPSSLRIEYGFHTHMFELTDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEVPYLESVVLAVEGIRKTRGL 393
            QSILVLGAGAVGSLYGGRL EAGHDVTFLMRREYDAV+  GLRI+SPDGDM+F  P I RS++E A  R                          G  +RR            +G+   PVDWVI+ LK++SF AIPSLL +RRVVG  TR+L LMNGYGLE+DL  + G+ G R+FGGMAFVCANRGPVGSGE+AHLKYGKL+IGHYEDD  EL  V  LFKGAK+EVETTP LL GRWSKCCWN+PFNGLGC+LGGKSVD+IVQTPELR LA+ +M DV+K AN +LGG              X           IE  F  H+F LTDAMGPYMSSTVLDLL GLPMET+YMFLRP +RA+ LGVEVPYLE V LAVEGIRK+RGL
Sbjct:  104 QSILVLGAGAVGSLYGGRLCEAGHDVTFLMRREYDAVAATGLRISSPDGDMFFPQPSIARSIEEVAVSRXXXXXXXXXXXXXXXXXXXXXAGGMAGDAERRKVVEETRDIEGAEGEAYVPVDWVIVTLKSSSFHAIPSLLEDRRVVGNATRILVLMNGYGLEEDLVGQ-GIDGKRVFGGMAFVCANRGPVGSGEIAHLKYGKLMIGHYEDDPVELSLVAGLFKGAKVEVETTPCLLHGRWSKCCWNIPFNGLGCILGGKSVDHIVQTPELRRLATLVMADVVKVANVELGG-------------RXXXXXXXXXXXXIEPSFQEHLFALTDAMGPYMSSTVLDLLGGLPMETEYMFLRPLKRAEALGVEVPYLEGVALAVEGIRKSRGL 478          
BLAST of NO20G00390 vs. NCBI_GenBank
Match: XP_005819658.1 (hypothetical protein GUITHDRAFT_82106 [Guillardia theta CCMP2712] >EKX32678.1 hypothetical protein GUITHDRAFT_82106 [Guillardia theta CCMP2712])

HSP 1 Score: 247.3 bits (630), Expect = 8.000e-62
Identity = 146/366 (39.89%), Postives = 199/366 (54.37%), Query Frame = 0
Query:   30 ILVLGAGAVGSLYGGRLLEAGHDVTFLMRREYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMRAARGGGRKRRXXXXXXXXXXXGDGDFPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKDLEEKAGVKGGRIFGGMAFVCANRGPVGSGEVAHLKYGKLVIGHYEDDLHELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNVPFNG---LGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIXXXXXXXXXXXXXTETVHSPSSLRIEYGFHTHMFELTDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEVPYLESVVLAVEGIRKTRGL 393
            I V+G+GAVG  YGGRLLEAGHDVTFL RR+ D ++K GLRI S DGD+ F   + V  + E  +                             VDWV++++K+ +  A   L+  +  +G +TR+LA++NG+G+E  L   +     +IFGGMAF C NR     GEV HLKYG +  GHY+DD  EL  V  LF+G+K++V T+  LL  RW K CWN+PFNG   +   +GG + D IV  P+LR LA K+M DV+K  N DL                 T  + SP +                  GPY  ST++DL+ G  ME +YMF  P ERA+ L V   Y+ESV+  ++GI++ R L
Sbjct:    6 IAVIGSGAVGLYYGGRLLEAGHDVTFLARRDLDRLNKDGLRIKSVDGDVNFAQVKAVGDVTEIGE-----------------------------VDWVLLSVKSYALEACKELV--KGCMGPQTRILAVINGFGIESCL--ASDFPHDKIFGGMAFTCINR--ESDGEVNHLKYGTITFGHYKDDKDELAKVVDLFEGSKVKVTTSDCLLYSRWEKLCWNIPFNGCPAIAVAMGGITTDIIVTDPDLRLLARKVMEDVVKVGNEDL----------------ETRNI-SPENEADNLAL----------PGPYRPSTMIDLVEGKQMEVEYMFGNPLERARALQVSCGYMESVISMIKGIQRIRKL 309          
BLAST of NO20G00390 vs. NCBI_GenBank
Match: PKN79505.1 (2-dehydropantoate 2-reductase [Chloroflexi bacterium HGW-Chloroflexi-9])

HSP 1 Score: 243.8 bits (621), Expect = 8.800e-61
Identity = 144/349 (41.26%), Postives = 187/349 (53.58%), Query Frame = 0
Query:   30 ILVLGAGAVGSLYGGRLLEAGHDVTFLMRREYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMRAARGGGRKRRXXXXXXXXXXXGDGDFPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKDLEEKAGVKG-GRIFGGMAFVCANRGPVGSGEVAHLKYGKLVIGHYEDDLHELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNVPFNGLGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIXXXXXXXXXXXXXTETVHSPSSLRIEYGFHTHMFELTDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEVPYLE 378
            + V+GAGAVG+ YG RL +AGH+V FL+RR+YDAV+  GL + S DGD   D P I RS  E                               PVDWVI ALK T+  A   L++    +G +TRVLALMNG G+E   E+ AG  G  R+FGG+AF C NRG    G + H+ YG L IGH +DD  E+     L+ G+K+ V   P+L   RW K CWN+PFNGL    GG + D I+  P+LRA A + M +V+ A NADL                  E  H+P  +R+       M   TDAM  Y  ST++D + G P+E + +F  P  RA+ LGV VP LE
Sbjct:    4 VAVIGAGAVGTYYGARLAQAGHEVHFLLRRDYDAVAAHGLEVRSKDGDFRVDAPHIHRSSAEIG-----------------------------PVDWVICALKATAIEAARDLIA--PCLGPKTRVLALMNGLGIE---EQMAGWFGRARMFGGLAFTCINRGE--PGVIHHIDYGALAIGHLDDDPAEVAAACALWDGSKVTVSPAPTLREARWRKLCWNIPFNGLAVTAGGVTTDVIMHNPDLRAAAERSMREVVAAGNADL------------------EAHHAP--IRLPVDIVEQMMATTDAMAVYRPSTMIDFVDGQPLEVEAIFGEPLRRARALGVPVPSLE 296          
BLAST of NO20G00390 vs. NCBI_GenBank
Match: PFG75429.1 (2-dehydropantoate 2-reductase [Thermoflexus hugenholtzii])

HSP 1 Score: 225.7 bits (574), Expect = 2.500e-55
Identity = 140/355 (39.44%), Postives = 179/355 (50.42%), Query Frame = 0
Query:   30 ILVLGAGAVGSLYGGRLLEAGHDVTFLMRREYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMRAARGGGRKRRXXXXXXXXXXXGDGDFPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKDLEEKAGVKGGRIFGGMAFVCANRGPVGSGEVAHLKYGKLVIGHYEDDLHELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNVPFNGLGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIXXXXXXXXXXXXXTETVHSPSSLRI-EYGFHTHMFELTDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEVPYLESVVLAV 384
            I V+GAGAVG  YGGRL  AGHDV FL+R +Y A   +GLR+ S DGD    D Q  R   E                                 DWVI ALK T+      L++     G ETR+ ALMNG G E+ L E+   +  RIFG MAFVC NRG    G + HL+YG++ +GH EDD  E   +  LF+GA IE    P+L   RW K CWNVPFNGL    GG     I++  ELRA A   M +V++A NADL                      + S  R+ E      MF  T+AM  Y +S V+DL+ G P+E + +   P  RA+EL V+VP +E++   V
Sbjct:    4 IAVIGAGAVGGYYGGRLALAGHDVRFLVRSDYAAWKARGLRVFSKDGDFTLPDVQAFRDPAELG-----------------------------TADWVICALKATAIDEAADLIA--PCAGPETRIAALMNGLGNEQRLAERFPAR--RIFGAMAFVCINRGE--PGVIHHLEYGRVSVGHLEDDPAETALLAELFRGAGIETVIAPNLRYARWEKLCWNVPFNGLSVAGGGIGTRTILEDRELRAFAEGAMREVVRAGNADLAA--------------------AGSEARLDEEDVVRRMFAQTEAMADYRTSMVIDLVLGRPLEAEAILGNPVRRARELAVQVPRMEALYALV 303          
BLAST of NO20G00390 vs. NCBI_GenBank
Match: WP_098504744.1 (2-dehydropantoate 2-reductase [Thermoflexus hugenholtzii])

HSP 1 Score: 225.7 bits (574), Expect = 2.500e-55
Identity = 140/355 (39.44%), Postives = 179/355 (50.42%), Query Frame = 0
Query:   30 ILVLGAGAVGSLYGGRLLEAGHDVTFLMRREYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMRAARGGGRKRRXXXXXXXXXXXGDGDFPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKDLEEKAGVKGGRIFGGMAFVCANRGPVGSGEVAHLKYGKLVIGHYEDDLHELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNVPFNGLGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIXXXXXXXXXXXXXTETVHSPSSLRI-EYGFHTHMFELTDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEVPYLESVVLAV 384
            I V+GAGAVG  YGGRL  AGHDV FL+R +Y A   +GLR+ S DGD    D Q  R   E                                 DWVI ALK T+      L++     G ETR+ ALMNG G E+ L E+   +  RIFG MAFVC NRG    G + HL+YG++ +GH EDD  E   +  LF+GA IE    P+L   RW K CWNVPFNGL    GG     I++  ELRA A   M +V++A NADL                      + S  R+ E      MF  T+AM  Y +S V+DL+ G P+E + +   P  RA+EL V+VP +E++   V
Sbjct:   16 IAVIGAGAVGGYYGGRLALAGHDVRFLVRSDYAAWKARGLRVFSKDGDFTLPDVQAFRDPAELG-----------------------------TADWVICALKATAIDEAADLIA--PCAGPETRIAALMNGLGNEQRLAERFPAR--RIFGAMAFVCINRGE--PGVIHHLEYGRVSVGHLEDDPAETALLAELFRGAGIETVIAPNLRYARWEKLCWNVPFNGLSVAGGGIGTRTILEDRELRAFAEGAMREVVRAGNADLAA--------------------AGSEARLDEEDVVRRMFAQTEAMADYRTSMVIDLVLGRPLEAEAILGNPVRRARELAVQVPRMEALYALV 315          
BLAST of NO20G00390 vs. NCBI_GenBank
Match: XP_005853834.1 (2-dehydropantoate 2-reductase, partial [Nannochloropsis gaditana CCMP526] >EKU22524.1 2-dehydropantoate 2-reductase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 210.7 bits (535), Expect = 8.300e-51
Identity = 121/224 (54.02%), Postives = 141/224 (62.95%), Query Frame = 0
Query:   28 QSILVLGAGAVGSLYGGRLLEAGHDVTFLMRREYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMR----------------------AARGGGRKRRXXXXXXXXXXXGDGD--FPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKDLEEKAGVKGGRIFGGMAFVCANRGPVGSGEVAHLKYGKLVIGHYEDDLHELLYVTHLFKG 228
            QSILVLGAGAVGSLYGGRL EAGHDVTFLMRREYDAV+  GLRI+SPDGDM+F  P I RS++E A  R                          G  +RR            +G+   PVDWVI+ LK++SF AIPSLL +RRVVG  TR+L LMNGYGLE+DL  + G+ G R+FGGMAFVCANRGPVGSGEV+        +G  E  L  L +   LF G
Sbjct:   58 QSILVLGAGAVGSLYGGRLCEAGHDVTFLMRREYDAVAATGLRISSPDGDMFFPQPSIARSIEEVAVSRXXXXXXXXXXXXXXXXXXXXXAGGMAGDAERRKVVEETRDIEGAEGEAYVPVDWVIVTLKSSSFHAIPSLLEDRRVVGNATRILVLMNGYGLEEDLVGQ-GIDGKRVFGGMAFVCANRGPVGSGEVSGEWTEDGGVGRKEGMLGTLTFFPPLFSG 280          
BLAST of NO20G00390 vs. NCBI_GenBank
Match: XP_002183689.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44871.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 199.9 bits (507), Expect = 1.500e-47
Identity = 134/388 (34.54%), Postives = 192/388 (49.48%), Query Frame = 0
Query:   28 QSILVLGAGAVGSLYGGRLLEAGHDVTFLMR-REYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMRAARGGGRKRRXXXXXXXXXXXGDGDFPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKD----LEEKAGVKGG-------RIFGGMAFVCANRGPVGSGEVAHLKYGKLVIG----------HYEDDLHELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNVPFNGLGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIXXXXXXXXXXXXXTETVHSPSSL-RIEYGFHTHMFELTDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEVPYLESVVLAVEGIRKTRGL 393
            Q + V+GAGAVGS YG RL EAGHDV F +R     +  +KGL++TS DGDMY   P+ +++     +M+                          PVDW++++LK+T+  A+P LL    ++    R++A+MNG  +E D    L+EK   +          ++GGMAF+C NR  +    V H  YG L  G            E+D    L    L+   K+ V    SLL GRW K  WN+PFNG+   +GG +VD IV    LR+L+  IM + +   NADL                  E  + P     ++      +  L+D MG Y  ST++DLL   PME  Y+F +P +R KELG+  PYLE++V  +E  +K  GL
Sbjct:   78 QRVAVIGAGAVGSYYGARLCEAGHDVQFHVRGSNLQSFRRKGLKVTSIDGDMYI-APEKIQAYASTNEMKK-------------------------PVDWIVVSLKSTALDAVPHLL--EPLLHPGVRIIAIMNGM-IEDDLIAMLKEKMEERSNGPLECCRALYGGMAFICCNR--LAPAVVDHSFYGPLAAGVASHRNENRRCEEEDKSAFL---RLWAPTKVRVSFEDSLLRGRWRKNIWNLPFNGISVAMGGITVDKIVTDMGLRSLSEHIMSETVAIGNADL------------------EREYGPEGYDPLDEEDKLFLMSLSDTMGEYRPSTMIDLLQRKPMEVYYLFRKPLDRGKELGISSPYLETIVWQIEAYQKEFGL 413          
BLAST of NO20G00390 vs. NCBI_GenBank
Match: OEU20431.1 (ApbA_C-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 186.4 bits (472), Expect = 1.700e-43
Identity = 129/376 (34.31%), Postives = 192/376 (51.06%), Query Frame = 0
Query:   29 SILVLGAGAVGSLYGGRLLEAG-HDVTFLMRRE-YDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMRAARGGGRKRRXXXXXXXXXXXGDGDFPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKD----LEEKAGVKG--GRIFGGMAFVCANRGPVGSGEVAH----LKYGKLVIGH---YEDDLHELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNVPFNGLGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIXXXXXXXXXXXXXTETVHS-PSSLRIEYGFHTHMFELTDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEVPYLESVVLAVEGIRK 389
            SI ++G+GAVG  YG RL E+G +DV F MR E     +  G  +TS DGD++    Q+    D                            +   PVDWV++ LK++S   IP L+    +  K TR+L +MNG  +E+D    L+E+AG +     ++GGMA VC+NR   G G V H    L  G L I     + D+ ++  +   L+    I++    SLL GRW KC WN+PFNG+   +GG +VD IV    LR LA+ IM + + AANAD+                     H     + ++      M +L+D MGPY +ST++D + G P+E  Y+F +P ERA+ LGV VP+L+++V  +E  ++
Sbjct:   48 SIAIVGSGAVGGYYGARLWESGSYDVKFQMRGENLKKSTSDGFVVTSIDGDIFIPPDQLQAFEDP---------------------------NDVGPVDWVVVCLKSSSLSDIPDLV-YPLLESKRTRILTIMNGL-IEEDLIQLLKERAGGEEFCAALYGGMALVCSNR--TGPGTVDHSFAGLLSGGLAISQERVFTDEENQQAF-QDLWAPTSIDIAYEQSLLAGRWRKCLWNLPFNGISVAMGGITVDKIVNDSGLRQLANIIMDETVSAANADM-------------------AAHGFGKEMYLDDADKKKMMDLSDNMGPYRTSTMIDFVEGRPLEVNYLFTKPVERARALGVCVPHLDTLVTQIEAYQR 372          
BLAST of NO20G00390 vs. NCBI_GenBank
Match: GBD23776.1 (Putative 2-dehydropantoate 2-reductase [bacterium HR29])

HSP 1 Score: 186.0 bits (471), Expect = 2.200e-43
Identity = 116/354 (32.77%), Postives = 167/354 (47.18%), Query Frame = 0
Query:   30 ILVLGAGAVGSLYGGRLLEAGHDVTFLMRREYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMRAARGGGRKRRXXXXXXXXXXXGDGDFPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKDLEEKAGVKGGRIFGGMAFVCANRGPVGSGEVAHLKYGKLVIGHYEDDLHELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNVPFNGLGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIXXXXXXXXXXXXXTETVHSPSSLRIEYGFHTHMFELTDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEVPYLESVVLAV 384
            I+V+G+GAVG  YG RL  AGH+V F+ RR+  A+ ++GL + SP+G    +  + V    E          GR                     DWVI +LK T+    P L +    VG +TR++ LMNG+G+E     + G +  R+ G MAFV  NRG    G V H+ YG++ +GH   D         L +GA +E    PSL   RW K CWNVPFNGL    GG     +++   L  +A + M +V+  ANADL                  E       L +E      MF  T  +  Y ++ ++D L G P+E + +   P  RA+ELGV+ P + ++   V
Sbjct:    4 IVVVGSGAVGLFYGARLQRAGHEVVFVARRDRAALRERGLLVESPEGSFRLEQARAVADASE---------AGR--------------------ADWVICSLKATALDVAPDLCA--PAVGPDTRLVVLMNGFGVEDPFVARFGTE--RVLGAMAFVGVNRGE--PGVVHHIAYGRVTVGHVAGDTLAAQEFADLLQGAGLEALVAPSLRFARWEKLCWNVPFNGLSVAAGGVGTRTVLEDDALADVAERAMREVVAVANADLAA--------------HGEPHRLDPQLVVE-----RMFAQTRVIADYRTNMLIDYLEGRPLEVEAILGAPLRRARELGVDTPTIAALYALV 303          
BLAST of NO20G00390 vs. NCBI_GenBank
Match: WP_027716301.1 (putative 2-dehydropantoate 2-reductase [Desulfuromonas sp. TF])

HSP 1 Score: 174.5 bits (441), Expect = 6.600e-40
Identity = 123/345 (35.65%), Postives = 169/345 (48.99%), Query Frame = 0
Query:   30 ILVLGAGAVGSLYGGRLLEAGHDVTFLMRREYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMRAARGGGRKRRXXXXXXXXXXXGDGDFPVDWVIIALKTTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKDLEEKAGVKGGRIFGGMAFVCANRGPVGSGEVAHLKYGKLVIGHYEDDLH-ELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNVPFNGLGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIXXXXXXXXXXXXXTETVHSPSSLRIEYGFHTHMFELTDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEV 374
            I V+GAGA+G  YG  L  +G +V FL+RR++ AVS  GL +TSP GD + D    V    + A M  A                          D V+I LKT     +  L+  R +VGK+T +L L NG G E+ L    G   GR+ GG+AF+CANRG  G+  V HL  G + +G +   L      V  LF  A +  E    L+  RW K  WN+PFNGL   L G + D ++  P  R  A++IM +VI+AANA                   +E + + S       F + MFELT+ MG Y  S +LD L G P+E + ++  P   A+E GVE+
Sbjct:    3 IAVIGAGALGLYYGAMLRRSGQEVEFLLRRDFQAVSAGGLHVTSPGGDFHLD---AVSCFQDSADMGEA--------------------------DLVLIGLKTFDNSRMVDLV--RPLVGKKTALLTLQNGLGNEEVLAAAFGT--GRVMGGVAFLCANRGEPGT--VHHLGQGAIRLGEFGRGLSGRAGIVAGLFNSAGVPCEAVADLMKARWEKLVWNIPFNGLS-ALTGLTTDRLLAHPPTRRQATEIMAEVIRAANAQ----------------GLSEPIDAVS-------FISRMFELTEPMGDYRPSMMLDRLEGRPLELESIYGIPLRMAEEKGVEM 288          
The following BLAST results are available for this feature:
BLAST of NO20G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22153.11.400e-12762.982-dehydropantoate 2-reductase [Nannochloropsis gad... [more]
XP_005819658.18.000e-6239.89hypothetical protein GUITHDRAFT_82106 [Guillardia ... [more]
PKN79505.18.800e-6141.262-dehydropantoate 2-reductase [Chloroflexi bacteri... [more]
PFG75429.12.500e-5539.442-dehydropantoate 2-reductase [Thermoflexus hugenh... [more]
WP_098504744.12.500e-5539.442-dehydropantoate 2-reductase [Thermoflexus hugenh... [more]
XP_005853834.18.300e-5154.022-dehydropantoate 2-reductase, partial [Nannochlor... [more]
XP_002183689.11.500e-4734.54predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU20431.11.700e-4334.31ApbA_C-domain-containing protein [Fragilariopsis c... [more]
GBD23776.12.200e-4332.77Putative 2-dehydropantoate 2-reductase [bacterium ... [more]
WP_027716301.16.600e-4035.65putative 2-dehydropantoate 2-reductase [Desulfurom... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL024nonsL024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR068ngnoR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002603NSK002603Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00390.2NO20G00390.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G00390.1NO20G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594320gene_6250Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100064g18gene8285Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00390.2NO20G00390.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G00390.1NO20G00390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00390 ID=NO20G00390|Name=NO20G00390|organism=Nannochloropsis oceanica|type=gene|length=2125bp
ACAAAAGTGCAAGACAGGAATGTCCATATGGCGGCGTGCTCGGCATCCAT
CACTAGCGTTCTTGCTGTCCTTGGTCCTCCTTTACACGACGGACGGCTTT
GGACCCCAGAGGCTACTCCCTGTCCGTGTCTCACTGACCACAGTGCCTGA
CCTCTGTAAGCACGGAGTCGTAGCTGAGACGACATGCAGGAGAAGAGAAT
ATCCTAATCCCTGTCGTCCGCAGGTCCGTATGAATTCTCGTTCGTGTACT
GTAGCCCTCCTGTCAGTTTCTCCCCAATCCTTCTATGTATGGGGAGAATG
TCTGTCTTACTTTTGTGCTACTGCCTTATGGAGCAATATCAACAATTTAT
AGTTGCGGGTGTCAAGTGCCCATAATCACATTCCATGTCCGCACTCCCGC
ACGCCCAACCCTTGGAGCCGTAATCAGTCACATTCCTGTGAGCAGGCGCA
TTTCCTGTGGTTGCTTTTCTTCTAACTTAACCATAGTGATGACGTGGCAT
TTCTTCTACTCCTCGTTAGACACTCATTAACTCCTTGACTTCACCGTCAT
CTTCCAACCCCCCATATATAGATGTCCACCTCCTCTATCAGTAGCGTCTC
GACCACCACCATCGATGCCGCCTCCCCGCCTCCACTTCATCCTCCCCCAC
GTCAGTCCATCCTCGTCCTCGGCGCCGGCGCAGTCGGCTCGCTTTATGGC
GGAAGATTGCTGGAAGCTGGGCACGATGTCACATTCTTAATGCGACGGGA
ATATGACGCCGTGAGCAAGAAAGGTTTGAGGATAACTTCCCCGGATGGAG
ACATGTATTTTGACGATCCCCAAATAGTACGGTCGATGGACGAGTATGCA
CAGATGCGTGCAGCAAGAGGAGGAGGAAGGAAAAGAAGAGGAGAGGGAGG
AGAAGGAGGAGAAATTGGAGAAGGCGACGGAGATTTTCCTGTGGATTGGG
TGATTATTGCTCTGAAGACCACTTCGTTTCCCGCGATTCCCTCCTTGCTT
TCGAATAGGCGCGTGGTGGGGAAGGAAACGAGGGTGTTGGCACTAATGAA
TGGATACGGCCTCGAGAAAGACCTGGAGGAAAAGGCAGGGGTGAAGGGAG
GGAGAATCTTTGGGGGTATGGCGTTTGTATGCGCGAACCGCGGGCCCGTC
GGGTCGGGTGAAGTGGCCCATTTGAAATACGGGAAGCTGGTCATCGGGCA
CTACGAGgttcgtctcacagcgccttgactcgctcaggcctggaaaggag
ggtttcgtttcttgcttgattccattcctatttctatgggtcttcatgat
gtagtgctttctgtccctgactcccttctattcctgcagGACGATCTTCA
CGAGCTATTGTACGTCACCCATCTCTTCAAGGGCGCCAAAATCGAGgtgc
gatggtcgtgaggctccttcctatccttcctcccctcttttctctctact
ctcatcttgatgacgacattgcatgtatcctgatgcttggcatgtccttt
cctccttttcgtattcagGTGGAAACCACGCCCTCCCTTCTTCTGGGGCG
GTGGAGCAAGTGCTGCTGGAACGTCCCTTTTAATGGGCTCGGGTGTGTGC
TAGGCGGTAAGAGCGTTGATTATATAGTCCAAACGCCAGAATTGCGTGCA
CTGGCAAGTAAGATCATGCTCGATGTTATCAAAGCGGCCAATGCCGACTT
AGGGGGAGGTATAGTTGGAGGAAGCAACGGAGGGAGTGAAGGAGGGGAGG
ATACTGAGACGGTGCATTCGCCTTCTAGTCTAAGGATTGAGTATGGGTTT
CACACGCACATGTTTGAATTAACCGATGCGATGGGTCCATACATGTCGAG
CACCGTGCTGGATCTGCTTGCCGGGCTGCCGATGGAGACGCAGTACATGT
TCCTCAGGCCATGGGAGCGCGCGAAAGAATTAGGGGTGGAGGTGCCTTAC
CTGGAGAGTGTAGTACTAGCAGTAGAAGGGATTCGGAAGACAAGGGGGCT
GTGAAGGGAAGAAGAATGGACACATGTATCTACGTGTAAATGGTTGACAA
GAACGAAGTACTCGAAGGAAAATGATAAAGAGACATAACACTTTACAGAT
GTGTCTGTGGGCCTGACGTTTTGAA
back to top

protein sequence of NO20G00390.2

>NO20G00390.2-protein ID=NO20G00390.2-protein|Name=NO20G00390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=393bp
MSTSSISSVSTTTIDAASPPPLHPPPRQSILVLGAGAVGSLYGGRLLEAG
HDVTFLMRREYDAVSKKGLRITSPDGDMYFDDPQIVRSMDEYAQMRAARG
GGRKRRGEGGEGGEIGEGDGDFPVDWVIIALKTTSFPAIPSLLSNRRVVG
KETRVLALMNGYGLEKDLEEKAGVKGGRIFGGMAFVCANRGPVGSGEVAH
LKYGKLVIGHYEDDLHELLYVTHLFKGAKIEVETTPSLLLGRWSKCCWNV
PFNGLGCVLGGKSVDYIVQTPELRALASKIMLDVIKAANADLGGGIVGGS
NGGSEGGEDTETVHSPSSLRIEYGFHTHMFELTDAMGPYMSSTVLDLLAG
LPMETQYMFLRPWERAKELGVEVPYLESVVLAVEGIRKTRGL*
back to top

protein sequence of NO20G00390.1

>NO20G00390.1-protein ID=NO20G00390.1-protein|Name=NO20G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=461bp
MSIWRRARHPSLAFLLSLVLLYTTDGFGPQRLLPVRVSLTTVPDLCKHGV
VAETTCRRREYPNPCRPQMSTSSISSVSTTTIDAASPPPLHPPPRQSILV
LGAGAVGSLYGGRLLEAGHDVTFLMRREYDAVSKKGLRITSPDGDMYFDD
PQIVRSMDEYAQMRAARGGGRKRRGEGGEGGEIGEGDGDFPVDWVIIALK
TTSFPAIPSLLSNRRVVGKETRVLALMNGYGLEKDLEEKAGVKGGRIFGG
MAFVCANRGPVGSGEVAHLKYGKLVIGHYEDDLHELLYVTHLFKGAKIEV
ETTPSLLLGRWSKCCWNVPFNGLGCVLGGKSVDYIVQTPELRALASKIML
DVIKAANADLGGGIVGGSNGGSEGGEDTETVHSPSSLRIEYGFHTHMFEL
TDAMGPYMSSTVLDLLAGLPMETQYMFLRPWERAKELGVEVPYLESVVLA
VEGIRKTRGL*
back to top
Synonyms
Publications