NO20G00380, NO20G00380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00380 vs. NCBI_GenBank
Match: EWM22140.1 (cytochrome b5 domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 270.8 bits (691), Expect = 4.500e-69 Identity = 147/264 (55.68%), Postives = 180/264 (68.18%), Query Frame = 0 Query: 1 MRKRTAGQRGLDYMVLPTADELAAELREREKNKGPSPKEIVKYAFFGFVAIILLMGMGWHLGQHQRRRNNGLSPTDLARARRAAHQAA---FPQDPDKPSILSLVQAEEDALPGVPRLFTFSELQQAKHDYLASSSPSSSSQPPIYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRPTRSYLNFRACVGTGGGGRG 262 MRKRTAGQR LDYMVLPTA+EL EL ++K KGPS ++I+ A FG A ++++ +GW LG+ R + G SP+DL ++R AA +AA +P + SILS+V+AEE+AL VPRLFT ++LQ+AK Y ++SPS+ PI LAIVGHVFDVSKG QFYAPP +E G DV+GL EEECRGVWRWVNFFK+KE+YPFVGRLVGMYFD DGRPTR+YLNFRACVG G G G Sbjct: 1 MRKRTAGQRSLDYMVLPTAEELVEEL--KKKQKGPSSRDILGRAMFGVAAFLVMITIGWQLGKLHRHK-KGYSPSDLVKSRSAAKKAAASTLSPEPSRQSILSMVEAEEEALAPVPRLFTAADLQRAKDAY-TTASPSTH---PILLAIVGHVFDVSKGAQFYAPPPVEEAG----------------GXXXXXXXXXXXXXDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEG 241
BLAST of NO20G00380 vs. NCBI_GenBank
Match: XP_023223791.1 (neuferricin-like [Centruroides sculpturatus]) HSP 1 Score: 121.3 bits (303), Expect = 4.400e-24 Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 0 Query: 104 AEEDALPGVPRLFTFSELQQAKHDYLASSSPSSSSQPPIYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRPTRSYLNFRACV 254 +E ++ R+FT EL +K+D S S P +YLAI+G VFDV KG Q Y P GGGY FFA RDA RAYVTGDFS +GL ++++GL+ G+ W++F+ +EEY +VG+L+G Y+D +G PT Y + R + Sbjct: 50 SESQSISSGERIFTVEEL--SKYD-------GSGSSPGLYLAILGKVFDVEKGAQHYRP---------GGGYSFFAGRDATRAYVTGDFSDQGLVDNIDGLESSALLGIDDWLHFY--EEEYIYVGKLIGRYYDKNGNPTEEYKSARQAI 179
BLAST of NO20G00380 vs. NCBI_GenBank
Match: KFM63298.1 (Neuferricin, partial [Stegodyphus mimosarum]) HSP 1 Score: 110.9 bits (276), Expect = 5.900e-21 Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = 0 Query: 114 RLFTFSELQQAKHDYLASSSPSSSSQPPIYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRPTRSYLNFR 251 +LFT EL+ K+D P S +YLAI+G VFDV KG Q Y P GGGY FF RDA+RAY+TGDF++ GL +DV GL + G+ W++F+ EEY VG+L+G Y+D +G PT+ L R Sbjct: 74 KLFTVDELK--KYD----GGPDSDG---LYLAILGEVFDVEKGAQHYRP---------GGGYSFFTGRDASRAYITGDFTENGLTDDVSGLDDASLVGIEDWLSFY--SEEYKPVGKLIGRYYDQNGNPTKELLTVR 190
BLAST of NO20G00380 vs. NCBI_GenBank
Match: XP_013783549.1 (neuferricin-like isoform X1 [Limulus polyphemus]) HSP 1 Score: 109.0 bits (271), Expect = 2.300e-20 Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = 0 Query: 142 IYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRPTRSYLNFRACV 254 +YLA +G V+DV +G Q Y P GGY FFA RDA RAYVTGDFS EGL +DV+GL EE G+ W+ F+ EY +VG++VG Y+D DG PT++ + A + Sbjct: 72 LYLAFLGKVYDVREGAQHYKP---------SGGYSFFAGRDATRAYVTGDFSDEGLIDDVKGLSNEEMMGINNWMEFY--DSEYVYVGKVVGRYYDKDGHPTQALQDALAAI 172
BLAST of NO20G00380 vs. NCBI_GenBank
Match: XP_022251614.1 (neuferricin-like isoform X2 [Limulus polyphemus]) HSP 1 Score: 109.0 bits (271), Expect = 2.300e-20 Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = 0 Query: 142 IYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRPTRSYLNFRACV 254 +YLA +G V+DV +G Q Y P GGY FFA RDA RAYVTGDFS EGL +DV+GL EE G+ W+ F+ EY +VG++VG Y+D DG PT++ + A + Sbjct: 40 LYLAFLGKVYDVREGAQHYKP---------SGGYSFFAGRDATRAYVTGDFSDEGLIDDVKGLSNEEMMGINNWMEFY--DSEYVYVGKVVGRYYDKDGHPTQALQDALAAI 140
BLAST of NO20G00380 vs. NCBI_GenBank
Match: XP_022101131.1 (neuferricin-like [Acanthaster planci] >XP_022101132.1 neuferricin-like [Acanthaster planci] >XP_022101133.1 neuferricin-like [Acanthaster planci]) HSP 1 Score: 108.2 bits (269), Expect = 3.900e-20 Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 0 Query: 111 GVPRLFTFSELQQAKHDYLASSSPSSSSQPPIYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRPT 244 G+P L+ + LA + S+ +YLA+ G VFDV KG + Y P GGGY FFA RDA RAYVTG+F++EGL++DVEGL ++ V WV+F+ K+EY VG+LVG Y+DA G PT Sbjct: 56 GIPPSRAKQPLRLLSKEELAQYDGNEGSK-GLYLAVFGQVFDVKKGARHYGP---------GGGYEFFAGRDATRAYVTGEFNEEGLKDDVEGLSPQQMLEVETWVDFY--KKEYTPVGKLVGRYYDATGAPT 176
BLAST of NO20G00380 vs. NCBI_GenBank
Match: XP_006007296.1 (PREDICTED: neuferricin isoform X1 [Latimeria chalumnae]) HSP 1 Score: 107.5 bits (267), Expect = 6.600e-20 Identity = 73/192 (38.02%), Postives = 98/192 (51.04%), Query Frame = 0 Query: 74 PTDLARARRAAHQAA----FPQDPDKPSILSLVQAEEDALPGVPRLFTFSELQQAKHDYLASSSP-----SSSSQPPIYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRPTRSYLNFRACVGTG 257 P ++ R AA AA F DP P L L G+ RL S L +K L S + + P +YLA++G VFDV KG + Y P GG Y FFA +DA+RA+VTGDF++ GL EDV GL E + W++F+ K++Y FVG+L+G ++D G PT S A V G Sbjct: 13 PAEMLRCFLAAVCAAVALLFGFDPSVPGHL---------LDGLSRLLAVSGLAGSKPVRLLSKAELCRYNGGADSPGLYLAVLGQVFDVKKGMRQYGP---------GGSYSFFAGKDASRAFVTGDFTEMGLVEDVAGLSPSEMVALHDWLSFY--KKDYIFVGKLIGQFYDEHGDPTESLKEAEALVAEG 184
BLAST of NO20G00380 vs. NCBI_GenBank
Match: XP_006007297.1 (PREDICTED: neuferricin isoform X2 [Latimeria chalumnae]) HSP 1 Score: 107.5 bits (267), Expect = 6.600e-20 Identity = 73/192 (38.02%), Postives = 98/192 (51.04%), Query Frame = 0 Query: 74 PTDLARARRAAHQAA----FPQDPDKPSILSLVQAEEDALPGVPRLFTFSELQQAKHDYLASSSP-----SSSSQPPIYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRPTRSYLNFRACVGTG 257 P ++ R AA AA F DP P L L G+ RL S L +K L S + + P +YLA++G VFDV KG + Y P GG Y FFA +DA+RA+VTGDF++ GL EDV GL E + W++F+ K++Y FVG+L+G ++D G PT S A V G Sbjct: 13 PAEMLRCFLAAVCAAVALLFGFDPSVPGHL---------LDGLSRLLAVSGLAGSKPVRLLSKAELCRYNGGADSPGLYLAVLGQVFDVKKGMRQYGP---------GGSYSFFAGKDASRAFVTGDFTEMGLVEDVAGLSPSEMVALHDWLSFY--KKDYIFVGKLIGQFYDEHGDPTESLKEAEALVAEG 184
BLAST of NO20G00380 vs. NCBI_GenBank
Match: XP_006007298.1 (PREDICTED: neuferricin isoform X3 [Latimeria chalumnae]) HSP 1 Score: 107.5 bits (267), Expect = 6.600e-20 Identity = 73/192 (38.02%), Postives = 98/192 (51.04%), Query Frame = 0 Query: 74 PTDLARARRAAHQAA----FPQDPDKPSILSLVQAEEDALPGVPRLFTFSELQQAKHDYLASSSP-----SSSSQPPIYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRPTRSYLNFRACVGTG 257 P ++ R AA AA F DP P L L G+ RL S L +K L S + + P +YLA++G VFDV KG + Y P GG Y FFA +DA+RA+VTGDF++ GL EDV GL E + W++F+ K++Y FVG+L+G ++D G PT S A V G Sbjct: 13 PAEMLRCFLAAVCAAVALLFGFDPSVPGHL---------LDGLSRLLAVSGLAGSKPVRLLSKAELCRYNGGADSPGLYLAVLGQVFDVKKGMRQYGP---------GGSYSFFAGKDASRAFVTGDFTEMGLVEDVAGLSPSEMVALHDWLSFY--KKDYIFVGKLIGQFYDEHGDPTESLKEAEALVAEG 184
BLAST of NO20G00380 vs. NCBI_GenBank
Match: XP_002115171.1 (hypothetical protein TRIADDRAFT_16260 [Trichoplax adhaerens] >EDV22627.1 hypothetical protein TRIADDRAFT_16260, partial [Trichoplax adhaerens]) HSP 1 Score: 105.5 bits (262), Expect = 2.500e-19 Identity = 52/129 (40.31%), Postives = 81/129 (62.79%), Query Frame = 0 Query: 114 RLFTFSELQQAKHDYLASSSPSSSSQPPIYLAIVGHVFDVSKGDQFYAPPDEKEGGREGGGYGFFAFRDAARAYVTGDFSKEGLREDVEGLKEEECRGVWRWVNFFKDKEEYPFVGRLVGMYFDADGRP 243 ++FT S+L+Q D Q PIYLA++G VFDV+KG + Y +GGGY FF+ RD RA+VTGDFS++GL ++++GL E G+ W++F+ ++Y +VG+L+G +++A G P Sbjct: 4 QIFTASDLKQYNGD---------DPQKPIYLAVLGQVFDVTKGKEHYG---------KGGGYNFFSGRDGTRAFVTGDFSEKGLNDEIKGLSHENFIGIKEWIDFY--HKDYSYVGKLIGRFYNAKGEP 112 The following BLAST results are available for this feature:
BLAST of NO20G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00380 ID=NO20G00380|Name=NO20G00380|organism=Nannochloropsis oceanica|type=gene|length=1835bpback to top protein sequence of NO20G00380.1 >NO20G00380.1-protein ID=NO20G00380.1-protein|Name=NO20G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top Synonyms
Publications
|