NO20G00320, NO20G00320 (gene) Nannochloropsis oceanica

Overview
NameNO20G00320
Unique NameNO20G00320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4646
Alignment locationchr20:109114..113759 -

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Properties
Property NameValue
DescriptionProgrammed cell death protein 4
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:109114..113759 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR003891Initiation_fac_eIF4g_MI
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of transcription, DNA-templated
Homology
BLAST of NO20G00320 vs. NCBI_GenBank
Match: CBJ33138.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 364.4 bits (934), Expect = 4.900e-97
Identity = 198/386 (51.30%), Postives = 262/386 (67.88%), Query Frame = 0
Query:   44 VGADGTAKRNIVRKGRDPMREKRQGGGHKGHWAATDDGT-LMVTKGSLDKDDPNYDS-ADDDPENIVLVADEEEARYDGGRRVREEDIVMSLTAFKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALDKKEEGERQAISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVRAKADGCLPSDFSP---QELSQLASNGK 425
            VG +GT+KRNI RKG    +        KG W  T+DG+      G  DK DPNYDS AD+   N VL +   + R  G         + +L  FK  +   ++EYF+SED+ E++RS+ EL +  YHYE+VKR I+MS+D K+ ERELVS+LLS  YP +LS+ +V KGFERLFE +DD+++D P+A   +A+FLARAV DE++PPS L +   + LGGE+V+ A+ LLSRDH+ +RLEH+WGPGDGR V ++KVAIDQL+ EYLLSRQ +EAA CV+EL C LFHHE+VKRAV  ALDK ++ +R A+SSLLA+L  +EVIS  Q +KGF RL+++LPDL LD P A   L     +A +DGCLP+D+ P         A NGK
Sbjct:   25 VGDEGTSKRNITRKGGVKGKNXXXXXXQKGRWDPTEDGSEAQARDGIADKGDPNYDSEADEHDNNYVLHSYRSQRRVPGP--------LHTLPEFKRHLKTIIEEYFLSEDISEVLRSVKELKSPAYHYEIVKRGINMSIDAKDHERELVSKLLSDAYPDILSSREVCKGFERLFEMIDDIQLDAPNARTLVASFLARAVADEIIPPSVLRNAAFLSLGGEIVKGARRLLSRDHVLSRLEHVWGPGDGRPVEELKVAIDQLLVEYLLSRQQDEAAACVKELDCSLFHHEIVKRAVKAALDKTDD-DRTAMSSLLAYLNKNEVISDEQSKKGFDRLHEILPDLVLDTPAAPSLLTKFTQQAISDGCLPADYKPPPXXXXXXAAENGK 401          
BLAST of NO20G00320 vs. NCBI_GenBank
Match: GAX12809.1 (hypothetical protein FisN_15Hh288 [Fistulifera solaris])

HSP 1 Score: 297.4 bits (760), Expect = 7.400e-77
Identity = 172/391 (43.99%), Postives = 244/391 (62.40%), Query Frame = 0
Query:   42 ESVGADGTAKRNIVRK-------GRDPMREKRQGGGHKGHWAATDDGTLMVTKGSLDKDDPNYDSADDDPENIV--LVADEEEAR-YDGGRRVREEDIVMSLTAFKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALD---KKEEGERQAIS------SLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVRAKADGCLPSDFSP 414
            E+   +GTAKRNI RK       G      K+QGG  KG W    D +    K  +D+ DP YD A+D    I+  + +D  E R YD G        +++L+ FK ++ + L EY+ S D +E++R++ EL  + YH E+VK+A+S++LD   R REL SRLL+ L+P+ ++ +D+  GFE+L ++++DL+ DVP A   +A+FLARAVVDE+LPP+F+SD      G  ++E A  LLSR+H  ARLE +WGPGDGR V D+K  +DQL+QEYLLS +L+EAARCV+EL    FHHE+VKR V  A++   KK +G+  A S      +L  FL  + ++S +Q++KG  RL+ +LPDL LD P A   LA     A   GCL S F+P
Sbjct:   51 ETKVVEGTAKRNITRKKTADKDSGNYNSAFKKQGGHGKGQWKELMDPS-YAEKDPIDEKDPIYDEAEDSSRYILSSMESDVVEKRGYDPGTSKAVYGPLLTLSEFKLQLTECLHEYYDSADTDEVIRTLEELGCQEYHSEIVKKAVSLALDKSSRSRELTSRLLTCLHPTPMTMSDMTTGFEKLLDSMEDLQTDVPDAATIVASFLARAVVDEVLPPAFMSDQNNNRPGDVVIEKALTLLSREHCTARLEKVWGPGDGRPVEDLKKDMDQLLQEYLLSCELDEAARCVKELEAAHFHHELVKRGVFAAMEKDGKKADGDPDAHSNLDAMVALFGFLVRNAIVSEYQVKKGIDRLHTILPDLTLDVPTAPSLLAAFEDLALQQGCLKSKFTP 440          
BLAST of NO20G00320 vs. NCBI_GenBank
Match: XP_002184928.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43664.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 295.0 bits (754), Expect = 3.700e-76
Identity = 168/380 (44.21%), Postives = 240/380 (63.16%), Query Frame = 0
Query:   44 VGADGTAKRNIVRK-------GRDPMREKRQGGGHKGHWAATDDGTLMVTKGSLDKDDPNYDSADDDPENIVL--VADEEEARYDGGRRVREEDIVMSLTAFKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALD---KKEEGER---QAISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVRAKADGCLP 409
            VG +GTAKRNI+RK       G      K+QGG  KG W    D T  V    +D+ DP Y++A+D    I+   V   +   YD          +++   FK ++A++LKEYF S D +E++R++ EL  + +H+E+VK+AIS+++D   REREL SRLL+ L+P+ LS   +  GF  L ++VDDL  DVP A   +A+FLARAVVDE+LPP++LS+   V +G  ++  A  LLSR+H  ARLE +WGPGDGR V ++K+ +DQL+QEYL SR+L+EAARCV+EL  P FHHE+VKR    A++   KKEE +     A+++LLAFL  + ++S +Q++KG +RL  +LPD+ LD P A   +          GCLP
Sbjct:   61 VGKEGTAKRNIIRKKTADIDSGNYNSTHKKQGGHGKGQWKDAMDPT-YVEDVPIDEKDPLYNAAEDLNRYILSSHVDGSDHRGYDPQTSKSVYGPMLTNQEFKVQVAEALKEYFDSCDADEVIRTLEELGCQEFHHEIVKKAISLAMDNSSRERELTSRLLTCLHPTPLSMEHMEAGFNLLLDSVDDLSTDVPEAETMVASFLARAVVDEVLPPAYLSEQNNVRVGDMVIAKAVALLSREHCTARLERVWGPGDGRPVEELKIEMDQLLQEYLHSRELDEAARCVKELHAPHFHHELVKRGAFAAMELDGKKEEQDHANLDAMAALLAFLVKNAIVSEYQVKKGLSRLKDVLPDMQLDVPLAPALMEAFAGFCAEQGCLP 439          
BLAST of NO20G00320 vs. NCBI_GenBank
Match: GAX25160.1 (hypothetical protein FisN_15Lh288 [Fistulifera solaris])

HSP 1 Score: 294.7 bits (753), Expect = 4.800e-76
Identity = 170/391 (43.48%), Postives = 244/391 (62.40%), Query Frame = 0
Query:   42 ESVGADGTAKRNIVRK-------GRDPMREKRQGGGHKGHWAATDDGTLMVTKGSLDKDDPNYDSADDDPENIV--LVADEEEAR-YDGGRRVREEDIVMSLTAFKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALDK---KEEGE------RQAISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVRAKADGCLPSDFSP 414
            E+   +GTAKRNI RK       G      K+QGG  KG W    D +    K  +D+ DP YD A+D    I+  + +D  E R YD G        +++L+ FK ++ + L EY+ S D +E++R++ EL  + YH E+VK+A+S++LD   R REL SRLL+ L+P+ ++ +D+  GFE+L ++++DL+ DVP A   +A+FLARAVVDE+LPP+F+SD      G  ++E A  LLSR+H  ARLE +WGPGDGR V D+K  +DQL+QEYLLS +L+EAARCV+EL    FHHE+VKR V  A++K   K +G+        A+++L  FL  + ++S +Q++KG  RL+ +LPDL LD P A   L      A   GCL S F+P
Sbjct:   39 ETKVVEGTAKRNITRKKTADKDSGNYNSAFKKQGGHGKGQWKELMDPS-YAEKDPIDEKDPIYDEAEDSSRYILSSMESDVAEKRGYDPGTSKAVYGPLLTLSEFKLQLTECLHEYYDSADTDEVIRTLEELGCQEYHSEIVKKAVSLALDKSSRSRELTSRLLTCLHPTPMTMSDMTTGFEKLLDSMEDLQTDVPDAATIVASFLARAVVDEVLPPAFMSDQNNNRPGDLVIEKALTLLSREHCTARLEKVWGPGDGRPVEDLKKDMDQLLQEYLLSCELDEAARCVKELEAAHFHHELVKRGVFAAMEKDGMKADGDPDAHSNLDAMAALFGFLVRNAIVSEYQVKKGIDRLHTILPDLTLDVPMAPSLLTTFEDLALQQGCLKSKFTP 428          
BLAST of NO20G00320 vs. NCBI_GenBank
Match: XP_002899252.1 (programmed cell death protein, putative [Phytophthora infestans T30-4] >EEY62221.1 programmed cell death protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 288.9 bits (738), Expect = 2.600e-74
Identity = 164/353 (46.46%), Postives = 221/353 (62.61%), Query Frame = 0
Query:   65 KRQGGGHKGHWAATDDGTLMVTKGSLDKDDPNYDSADDDPENIVLVADEEEARYDGGRRVREEDIVMSLTA------FKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALDKKEEGERQAISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVRAKADGCLPSDF 412
            KR GGG K  W  T+    + T    D  DPNYDS  +  EN+VLV+    +       +  +++     A       K RI + L+EYF S D +E++ S+++L+   ++YE+VKRAI+M++D  ++EREL SRLLSTLY   L+   V  GF R+     DL++D+P+A   +A F ARAVVDE+LPPSFL DP +     E+   A   LS +H  AR+E  WGPGDGR V ++KVAIDQL +EYLLSR LEEAARCVREL  P FHHEVVKR +  +L++  E    A++SLLA+L ++EV+S  Q+ KGF R   +L D+ALD PNAA     +V R  +DG LP DF
Sbjct:   55 KRMGGGQKASWNVTEIPRAVPT----DAHDPNYDS--EAEENVVLVSTVAGSPTKTTTTLEPDELAAKELALNPPPEIKKRIIEILEEYFTSGDADEVLSSLNDLDEPEFNYEVVKRAITMAMDKNDKERELASRLLSTLYLDGLTAGQVLMGFRRVLLLAGDLQIDIPTAKNMLAIFCARAVVDEILPPSFLEDPFITRYAPEIAGEAIKKLSINHATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLEEAARCVRELNVPHFHHEVVKRGITNSLEEGGEANSAAMASLLAYLVSNEVVSTGQLVKGFERFKFVLDDVALDIPNAAALFKDIVARGISDGILPKDF 401          
BLAST of NO20G00320 vs. NCBI_GenBank
Match: XP_009537690.1 (hypothetical protein PHYSODRAFT_356091 [Phytophthora sojae] >EGZ06926.1 hypothetical protein PHYSODRAFT_356091 [Phytophthora sojae])

HSP 1 Score: 285.8 bits (730), Expect = 2.200e-73
Identity = 163/354 (46.05%), Postives = 217/354 (61.30%), Query Frame = 0
Query:   65 KRQGGGHKGHWAATDDGTLMVTKGSLDKDDPNYDSADDDPENIVLVADEEEARYDGGRRVREEDIVMSL-------TAFKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALDKKEEGERQAISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVRAKADGCLPSDF 412
            KR GGG K  W  T+    + +    D+ DPNYDS  +  EN+VLV+              E D + +           K RI + L+EYF S D +E++ S+++L+   ++YE+VKRAI+M++D  ++EREL SRLLS LY   L+   V  GF R+     DL++D+P+A   +A F ARAVVDE+LPPSFL DP +     E+   A   LS +H  AR+E  WGPGDGR V ++KVAIDQL +EYLLSR LEEAARCVREL  P FHHEVVKR +  +L++  E    A++SLLA+L + EV+S  Q+ KGF R   +L D+ALD PNAA      V R  +DG LP DF
Sbjct:   52 KRMGGGQKASWKVTEIPRAVPS----DEHDPNYDS--EAEENVVLVSTPGSPTKSKSTPTLEPDELAAKELALNPPPEIKKRIIEILEEYFTSGDADEVLSSLNDLDEPEFNYEVVKRAITMAMDKNDKERELASRLLSALYLDGLTAGQVLMGFRRVLLLAGDLQIDIPTAKNMLAIFCARAVVDEILPPSFLEDPFITRYAPEIAAEAIKKLSINHATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLEEAARCVRELNVPHFHHEVVKRGITNSLEEGGEANSAAMASLLAYLVSHEVVSTGQLIKGFERFKLVLDDVALDIPNAAALFQDTVARGVSDGILPKDF 399          
BLAST of NO20G00320 vs. NCBI_GenBank
Match: EJK59532.1 (hypothetical protein THAOC_20224 [Thalassiosira oceanica])

HSP 1 Score: 285.0 bits (728), Expect = 3.800e-73
Identity = 168/371 (45.28%), Postives = 232/371 (62.53%), Query Frame = 0
Query:   47 DGTAKRNIVRK-------GRDPMREKRQGGGHKGHW---AATDDGTLMVTKGSLDKDDPNY-DSADDDPENIVLVADE--EEAR--------YDGGRRVREEDIVMSLTAFKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALDK------KEEGERQAISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNA 391
            +G+A+RNI RK       GR   R K+QGG  KG W   +   +G L      LDKDDP Y    DD+P + V  + E   E+R        YD          +++L+ FK R++D+++EYF S D +E+VR I E+    YH E+VKRA+S+ LD   RERELVSRLL+ L+P  L+  ++G GFE L +++DDL +D+P A   +  FLARAVVDE+L P+FLSD      G  +VE A  LLSR+H  ARLE +WGPGDGR V ++K AIDQL++EYL+SR+L+EAA CVREL  P FHHE+VKR + +A+++       E     A+++L  FL  + ++S +Q+ KG +RL + LPDL LD P A
Sbjct:   57 EGSARRNITRKKTDAKDTGRYDSRNKKQGGAGKGRWDPMSEAYEGDL-----KLDKDDPMYVPEEDDEPTSYVFSSSEAGNESRHSGAAPDAYDAANDKAVYGPMLTLSEFKIRVSDAVREYFDSSDADEVVRCIHEMKCNEYHPEVVKRAVSLGLDEGPRERELVSRLLACLHPVPLTDEEMGMGFEVLLDSIDDLVIDIPDAKSMVGCFLARAVVDEVLAPAFLSDRNNSHPGDCVVEKAVSLLSREHCTARLEKVWGPGDGRPVAELKDAIDQLLKEYLMSRELDEAASCVRELKAPHFHHELVKRGIKIAIEEDGHNHTSESSSLDAMAALFKFLVDNSIVSEYQVGKGASRLRRALPDLTLDVPAA 422          
BLAST of NO20G00320 vs. NCBI_GenBank
Match: ETM48417.1 (hypothetical protein L914_07044 [Phytophthora parasitica])

HSP 1 Score: 285.0 bits (728), Expect = 3.800e-73
Identity = 162/353 (45.89%), Postives = 219/353 (62.04%), Query Frame = 0
Query:   65 KRQGGGHKGHWAATDDGTLMVTKGSLDKDDPNYDSADDDPENIVLVADEEEARYDGGRRVREEDIVMSLTA------FKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALDKKEEGERQAISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVRAKADGCLPSDF 412
            KR GGG K  W  T+    +      D+ DPNYDS  +  EN+VLV+    +       +  +++     A       K RI   L+EYF S D +E++ S+++L+   ++YE+VKRAI+M++D  ++EREL SRLLS LY   L+   V  GF R+     DL++D+P+A   +A F ARAVVDE+LPPSFL DP +     E+   A   LS +H  AR+E  WGPGDGR V ++KVAIDQL +EYLLSR LEEAARCVREL  P FHHEVVKR +  +L++  E    A++SLLA+L ++EV+S  Q+ KGF R   +L D+ALD PNAA     +V R  +DG LP DF
Sbjct:   54 KRMGGGQKASWKVTE----IPQAVPADERDPNYDS--EAEENVVLVSTVAGSPTKSTPTLEPDELAAKELALNPPPEIKKRIIVILEEYFTSGDADEVLSSLNDLDEPEFNYEVVKRAITMAMDKNDKERELASRLLSALYLDGLTAGQVLMGFRRVLLLAGDLQIDIPTAKNMLAIFCARAVVDEILPPSFLEDPFITRYAPEIAAEAIKKLSINHATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLEEAARCVRELNVPHFHHEVVKRGITNSLEEGGEANSAAMASLLAYLVSNEVVSTGQLIKGFERFKFVLDDVALDIPNAAALFKDIVARGISDGILPKDF 400          
BLAST of NO20G00320 vs. NCBI_GenBank
Match: ETO77484.1 (hypothetical protein F444_07332 [Phytophthora parasitica P1976])

HSP 1 Score: 285.0 bits (728), Expect = 3.800e-73
Identity = 162/353 (45.89%), Postives = 219/353 (62.04%), Query Frame = 0
Query:   65 KRQGGGHKGHWAATDDGTLMVTKGSLDKDDPNYDSADDDPENIVLVADEEEARYDGGRRVREEDIVMSLTA------FKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALDKKEEGERQAISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVRAKADGCLPSDF 412
            KR GGG K  W  T+    +      D+ DPNYDS  +  EN+VLV+    +       +  +++     A       K RI   L+EYF S D +E++ S+++L+   ++YE+VKRAI+M++D  ++EREL SRLLS LY   L+   V  GF R+     DL++D+P+A   +A F ARAVVDE+LPPSFL DP +     E+   A   LS +H  AR+E  WGPGDGR V ++KVAIDQL +EYLLSR LEEAARCVREL  P FHHEVVKR +  +L++  E    A++SLLA+L ++EV+S  Q+ KGF R   +L D+ALD PNAA     +V R  +DG LP DF
Sbjct:   54 KRMGGGQKASWKVTE----IPQAVPADERDPNYDS--EAEENVVLVSTVAGSPTKSTPTLEPDELAAKELALNPPPEIKKRIIVILEEYFTSGDADEVLSSLNDLDEPEFNYEVVKRAITMAMDKNDKERELASRLLSALYLDGLTAGQVIMGFRRVLLLAGDLQIDIPTAKNMLAIFCARAVVDEILPPSFLEDPFITRYAPEIAAEAIKKLSINHATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLEEAARCVRELNVPHFHHEVVKRGITNSLEEGGEANSAAMASLLAYLVSNEVVSTGQLIKGFERFKFVLDDVALDIPNAAALFKDIVARGISDGILPKDF 400          
BLAST of NO20G00320 vs. NCBI_GenBank
Match: ETO77485.1 (hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 285.0 bits (728), Expect = 3.800e-73
Identity = 162/353 (45.89%), Postives = 219/353 (62.04%), Query Frame = 0
Query:   65 KRQGGGHKGHWAATDDGTLMVTKGSLDKDDPNYDSADDDPENIVLVADEEEARYDGGRRVREEDIVMSLTA------FKARIADSLKEYFVSEDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYPSLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSFLSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAIDQLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALDKKEEGERQAISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVRAKADGCLPSDF 412
            KR GGG K  W  T+    +      D+ DPNYDS  +  EN+VLV+    +       +  +++     A       K RI   L+EYF S D +E++ S+++L+   ++YE+VKRAI+M++D  ++EREL SRLLS LY   L+   V  GF R+     DL++D+P+A   +A F ARAVVDE+LPPSFL DP +     E+   A   LS +H  AR+E  WGPGDGR V ++KVAIDQL +EYLLSR LEEAARCVREL  P FHHEVVKR +  +L++  E    A++SLLA+L ++EV+S  Q+ KGF R   +L D+ALD PNAA     +V R  +DG LP DF
Sbjct:   52 KRMGGGQKASWKVTE----IPQAVPADERDPNYDS--EAEENVVLVSTVAGSPTKSTPTLEPDELAAKELALNPPPEIKKRIIVILEEYFTSGDADEVLSSLNDLDEPEFNYEVVKRAITMAMDKNDKERELASRLLSALYLDGLTAGQVIMGFRRVLLLAGDLQIDIPTAKNMLAIFCARAVVDEILPPSFLEDPFITRYAPEIAAEAIKKLSINHATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLEEAARCVRELNVPHFHHEVVKRGITNSLEEGGEANSAAMASLLAYLVSNEVVSTGQLIKGFERFKFVLDDVALDIPNAAALFKDIVARGISDGILPKDF 398          
The following BLAST results are available for this feature:
BLAST of NO20G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ33138.14.900e-9751.30conserved unknown protein [Ectocarpus siliculosus][more]
GAX12809.17.400e-7743.99hypothetical protein FisN_15Hh288 [Fistulifera sol... [more]
XP_002184928.13.700e-7644.21predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX25160.14.800e-7643.48hypothetical protein FisN_15Lh288 [Fistulifera sol... [more]
XP_002899252.12.600e-7446.46programmed cell death protein, putative [Phytophth... [more]
XP_009537690.12.200e-7346.05hypothetical protein PHYSODRAFT_356091 [Phytophtho... [more]
EJK59532.13.800e-7345.28hypothetical protein THAOC_20224 [Thalassiosira oc... [more]
ETM48417.13.800e-7345.89hypothetical protein L914_07044 [Phytophthora para... [more]
ETO77484.13.800e-7345.89hypothetical protein F444_07332 [Phytophthora para... [more]
ETO77485.13.800e-7345.89hypothetical protein, variant [Phytophthora parasi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002554NSK002554Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00320.1NO20G00320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594292gene_6240Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101365g2gene8236Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00320.1NO20G00320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00320 ID=NO20G00320|Name=NO20G00320|organism=Nannochloropsis oceanica|type=gene|length=4646bp
CGAGGGCAAGACACTTTCCTTCTTTTCCCATCACGTTGTCCACTTCTGGT
GTCAAACCATTACGATTGACCGTATGCGAATAAAGAGGAAGACCATATCT
GAACTCATGGTGGGTCTGCGAGTCATACATGTGCTGTAGGGCGTGGTATG
ATAACGAGTCAGAGACGACGGCTTCTAGAGGATACCTCAAGGCCCAACTG
ATCCCACACAGGCACGCCGCCCTGGGGGCGTTGGTCATGGCTCAGAAATG
AAGAGGCGGACACTGTAACGATGAGTTTGTCTCACGAGAAATGGAAATAG
CGTTGGAGTGGGAGAAATGATGAGGCTTGCCTCATTGCATCAAAAGCAGA
AGACGCGGGCGTGCCGTACCAGTTGATGCCACTAGTGCCATTTCCCTCCC
TCTTGCACGCCCCTCTTGTTGTTGACACCGGCTCACGACACTGTGAAATC
ACCCAATAAAATACAGGGGAGGTAACCTTGCGCGTCTATCACCTCGTAGC
CTTATCACCTTCTAAGCTTCATATCAGGAAGCTATAGCAACAGCAGCCGT
CGTATCGGCCACATCAGCAATAGCATGAGCGATTGGCAACGTACCGCGGA
TCCTGAGGCAACGGCAGAAGCAGAGGTCGTGGCAGAGGGCCGGGCCCGGG
CGCGAAGTGGAAGCGGGGGGTCGCATAAGGGCGGCGCAAAAGgtgggtat
gctgacaagtgaatatgtcctacgtgtgtgctcaccacttcacgtctttt
cccctttaatcttcatcctattttccgaacatgaagGGGTGGAATCGGTG
GGTGCAGATGGCACGGCCAAGCGGAACATCGTGCGCAAGGGCCGGGACCC
CATGAGGgtaagggaaggagggaatgaggaaagggaggaggaagggaaga
gggattgcgagaagacaaggaatacaatacttcactccaaatgcgatagt
gtttccgctttctaatgcgttgtcccctcaccctccttctttcccttctc
tactttccttctcctcacaccagGAGAAGAGGCAAGGTGGGGGCCATAAG
GGACATTGGGCTGCCACTGATGACGGCACCCTGATGGTGACGAAGGGCAG
CCTCGACAAGGACGATCCTAACTACGATAGTGCGgtacgtgtgggataca
gggagggaaggagagtgagagggggggtgggagggagggtgtaaagtctc
tccttgtggctccggtctggcgatgcactcatcttattgctttctaccca
tcatcacaatttccttcttcttctcttccttcttcttctccttcttcgtc
tccttctcctcctcactcccctcctcctcctctttttcggcgacgacccg
cccgtttgaaagGATGACGATCCCGAAAACATAGTGCTGGTGGCGGACGA
GGAAGAGGCGCGTTACGACGGGGGGCGGCGAGTGCGGGAGGAGGATATTG
TCATGTCCCTGACTGCCTTCAAGgtgagggaggaaggaagggatggacgg
acggacggagggaggaacggagaaacagtgattcgggaaaagggagggag
gaagggagggaggggtggatgaggagatgttggattgccccagcagacaa
agcttccctctatttccttcccttcttcacggtcgtcgtcccctccctcc
ctccttcccttcctccttccctccttccctccctccctccctcagGCCCG
CATCGCAGACTCCCTGAAAGAGTACTTTGTCTCGGAGGACATGGAGGAGA
TGGTCCGCTCCATCAGTGAACTTAACGCCAGGTTCTACCACTACGAGCTC
GTCAAGCGgtgcgtccccccctccctccctctccccctccctccctccct
actttgcatattcaaacatccaaacattaccgtccctcccttcctccctc
tttccctcccagCGCCATCTCCATGTCCCTGGACGGTAAAGAGCGCGAAC
GGGAGCTAGTCTCCCGCCTCCTTTCCACCCTCTACCCCTCCCTCCTCTCC
ACCGCCGATGTGGGCAAGGGATTTGAACGTCTGTTTGAAACCGTTGACGA
CCTGCGGGTGGACGTGCCCAGgtagggagggagggaaaaaaaggagaata
ttgtatatcctgatccatgatctctttccttctctttccttttgcatgcc
ctcattccttctcctcttactctgcccactatcttctatgcccccccctt
ccctccctccagCGCCGTCCGTGACATCGCCACCTTCCTGGCCCGGGCTG
TGGTGGACGAGCTCCTCCCTCCCTCCTTCCTCTCTGATCCTCTGGTCGTC
GGCCTGGGAGGGGAAATGGTGGAGCACGCTAAACTGCTGCTCTCGCGGGA
TCACATGGGAGCACGgtacgtcctcctccctccctccctccctccctccc
tccctccctccatttctcttgttcttccccactagttttgggtctttgtg
aaggcttcgcgcaattttcttctccttttcctctttcctcccggaccatc
tccgttgcattacactggagtcatggagtcaccactcgacgtctgaagcc
tccctccctccctccttccctccctctctctctccctccctccctccctc
gccacagCCTCGAGCACATTTGGGGCCCGGGTGACGGCCGGAGTGTGCCC
GACATGAAGGTGGCGATCGACCAGCTCGTGCAGgtacgccctctatccct
ccctccctccctccctttctcccttcctcgagcgctttatccctgcttcc
ctccttccttccctcccactcacccggatcctccccctctctctcttcct
ctctgttgacgttttcccagGAGTACCTCCTCTCTCGACAGCTCGAAGAA
GCCGCTCGCTGCGTCCGAGgtgggctttctctccctccctttctccatcc
tttcccttttccctgtctacttcttcgcccatccaccctcttctcttcct
ccctccttccaaagtggcttgctcccactcaccctcccttccctccctcc
ctccctccctctctccctccctctctccctccctccctcagAACTGGCTT
GCCCCCTCTTTCATCACGAGGTAGTGAAGAGGGCCGTGGTCCTGGCCCTC
GACAAGAAGGAGGAGGGCGAACGCCAAGCCATCTCCTCCTTACTCGCCTT
TCTCTTCGCGGACGAGgtgaggagggagggagggaggaagggagagaggg
agggagggagggaggggagggagtcttaatgggggtccaaatgctcgggc
ttgactcttgccttccccttcttccctctcgaacaccaccctcggtttca
ccttcctcctctccttccctccctccctccctccttccctctctccctcc
tagGTCATCTCCGGGCACCAGATGCGCAAAGGATTTACACGCCTCTATCA
GCTGCTTCCTGACCTGGCTCTAGACGCACCTAATGCCGCTGTTTACCTCG
CAGGGATGGTCGTCCGGgtacggcccctccctccctccctccctccctcc
ctccctccctccctccctcccgattaggagcaggcaggcatctcctttct
cccagaatgaggcttctccagaggcctgcccgccgcagaccgcagcctaa
gaaactttcccatctccgtatctcacccgccctccctccctccctctttt
cagGCCAAGGCCGATGGCTGTCTACCTTCCGACTTCTCTCCTCAGGAGCT
GTCTCAGTTGGCGTCCAACGGTAAGACTAGCAGCAGCAGCAAATAGTGGC
AAATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACGTCA
GCGAACCCAGCGCTTCTCGTAAAGTGGAAAGAGGGAAGGAGGAAGGAAGG
GAGCGAGGGAGGGGGCAAATGAAGAGCTCAGTGTCTATAAATTGCTTATT
TTTGGCTGTGGGTGAAGGAGGTTTTACGGGAAGGGAGGGGCTGGGAAAGA
GAGGGGAGGAGGAAGGAAGAAGAGAGGGTGACTACGAGTCAGATTGACTA
ACATGTAGACGGAAACGAGGAATGGAAAAAGGCACCGAAAGAGGAGCAGT
GACAGAGGGAGGAACGAGGCGATGGAGGGAGGGAGGATTTGAAATAAAAA
TAACGATAGCGACCTTGACAGCAGTAGCGGCAGGATGGCATGCGATCAAA
GAGAGTGTGTGCAAAATAATAGCGAGAGACAAGGGGTGGCGAGGCAGTAC
CAGGGCGTGAAGGAAGGAAAGAGGGGAGGGAGGGAGGAAGAGGTAGGGTT
ACGTCAAGGGCAAAGGGATTGGAGGGCCAGGAAGGCGGCGCGATGTCTTT
CCCTCTCTCCCTTCCTCCCTCACGCCCTCCCTCCCTTGACTGGTCCTGCC
GAATTAGATTCACAATATGGATAATCAAAAGAAGCAGCAGCAGCAGAGAC
ACACACACATGGAGAGAAGCAGTTCACAGCTACAAATTGCTATTTCTTGG
AGTCCCTCGGACTTCGTCGTCATCGATTTCCCTCTCTCTCTCTTTACTCA
CTCAAAGTTTTTCCCTCTTTCTCTTTTCCTCCCATTGAAAAAAAACGACA
ACTTCAAATTAACGAATCAAATAAACGGTTGGATGAAAACGGAAATAATC
CTGTCCTGTCGGTGACAACAAATACCGGGAAGGCTTGAGGGCATCC
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protein sequence of NO20G00320.1

>NO20G00320.1-protein ID=NO20G00320.1-protein|Name=NO20G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=431bp
MSDWQRTADPEATAEAEVVAEGRARARSGSGGSHKGGAKGVESVGADGTA
KRNIVRKGRDPMREKRQGGGHKGHWAATDDGTLMVTKGSLDKDDPNYDSA
DDDPENIVLVADEEEARYDGGRRVREEDIVMSLTAFKARIADSLKEYFVS
EDMEEMVRSISELNARFYHYELVKRAISMSLDGKERERELVSRLLSTLYP
SLLSTADVGKGFERLFETVDDLRVDVPSAVRDIATFLARAVVDELLPPSF
LSDPLVVGLGGEMVEHAKLLLSRDHMGARLEHIWGPGDGRSVPDMKVAID
QLVQEYLLSRQLEEAARCVRELACPLFHHEVVKRAVVLALDKKEEGERQA
ISSLLAFLFADEVISGHQMRKGFTRLYQLLPDLALDAPNAAVYLAGMVVR
AKADGCLPSDFSPQELSQLASNGKTSSSSK*
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Synonyms
Publications