NO20G00300, NO20G00300 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO20G00300 vs. NCBI_GenBank
Match: EWM22205.1 (hypothetical protein Naga_100291g6 [Nannochloropsis gaditana]) HSP 1 Score: 305.8 bits (782), Expect = 1.300e-79 Identity = 162/280 (57.86%), Postives = 202/280 (72.14%), Query Frame = 0 Query: 1 MHASPLRPSSCLLVIILAFALVVLVQGQEKAHQNEKPTRPFSRLQS------TTGSGSKTDSAQLPGNQEAEFTKPTNRVGYLLNLTKNGLNPVQAFRDAMNTEGFKAILDNSEIQHRVLKELPLLGAIEGFSKIKDNRRLSAEDTKKSFATGMDNLLNLANDAFFNKVNDPAKVSETVAKMATSPDPSIQALFQRAQSGEKEAVEALQDEFTKRHYTGLDGKAFREISMEQTASKMEQLPEMMHFIEKDPSLAQVFKDLAGMKGGNFPPTEEAMMASTK 275 M A+ L S+ LLVI+ F + A ++++ +RPFSRLQS FTKP++R GYLLNLTKN NPVQ F+DAMNT+GFKAILDN +IQHRVLK+ PLLGA+ GFS IKDNRRLSAE+TK SF+TGM+ LLNLA+DAFFNKVN+P KVS T+AKMA S DP IQ LF+RA++GE+ AVE LQDEF +HY+G+DGKAFREIS + K +Q+PEMMHFI+KD SLA+ F+DL+ M+ +FPPTEE MMA+ + Sbjct: 1 MQAASLYSSTVLLVILAVFMGCTV-----HAQEHDRSSRPFSRLQSXXXXXXXXXXXXXXXXXXXXXXXXXXFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAFEDLSRMRDSDFPPTEEEMMATVE 275
BLAST of NO20G00300 vs. NCBI_GenBank
Match: XP_005854196.1 (hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526] >EKU22160.1 hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 286.6 bits (732), Expect = 8.300e-74 Identity = 158/302 (52.32%), Postives = 200/302 (66.23%), Query Frame = 0 Query: 9 SSCLLVIILAFALVVLVQGQEKAHQNEKPTRPFSRLQS------TTGSGSKTDSAQLPGNQEAEFTKPTNRVGYLLNLTKNGLNPVQAFRDAMNTEGFKAILDNSEIQHRVLKELPLLGAIEGFSKIKDNRRLSAED------------------------------TKKSFATGMDNLLNLANDAFFNKVNDPAKVSETVAKMATSPDPSIQALFQRAQSGEKEAVEALQDEFTKRHYTGLDGKAFREISMEQTASKMEQLPEMMHFIEKDPSLAQVFKDLAGMKGGNFPPTEEAMMASTK 275 SS +L+++LA + V QE +++ +RPFSRLQS FTKP++R GYLLNLTKN NPVQ F+DAMNT+GFKAILDN +IQHRVLK+ PLLGA+ GFS IKDNRRLSAE+ TK SF+TGM+ LLNLA+DAFFNKVN+P KVS T+AKMA S DP IQ LF+RA++GE+ AVE LQDEF +HY+G+DGKAFREI+ + K +Q+PEMMHFI+KD SLA+ F+DL+ M+ +FPPTE+ MMA+ + Sbjct: 8 SSTVLLVVLAVFMGCTVHAQE----HDRSSRPFSRLQSXXXXXXXXXXXXXXXXXXXXXXXXXXFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEEVRWQIRGKRRRKREGNLIYGRGNDETLNAQTKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREITKQHNGDKFKQMPEMMHFIQKDASLAKAFEDLSRMRDSDFPPTEKEMMATVE 305
BLAST of NO20G00300 vs. NCBI_GenBank
Match: EWM25436.1 (hypothetical protein Naga_100005g87 [Nannochloropsis gaditana]) HSP 1 Score: 164.1 bits (414), Expect = 6.200e-37 Identity = 93/250 (37.20%), Postives = 143/250 (57.20%), Query Frame = 0 Query: 34 NEKPTRPFSRLQSTTGSGSKTDSAQLPGNQEA-------------------------------EFTKPTNRVGYLLNLTKNGLNPVQAFRDAMNTEGFKAILDNSEIQHRVLKELPLLGAIEGFSKIKDNRRLSAEDTKKSFATGMDNLLNLANDAFFNKVNDPAKVSETVAKMATSPDPSIQALFQRAQSGEKEAVEALQDEFTKRHYTGLDGKAFREISMEQTASKMEQLPEMMHFIEKDPSLAQVFK 253 N+K RPF+RLQSTTG+ T QL N++ + +P ++V +L + K ++P++ F + ++ F+A+L N EIQHR+LKE+PLL A +GF +I RRLSA +T + FA G+ N+++ A AF KV DP + + T+AKMA P+P+IQ+LF+RAQ G+ AVE LQD F H+ G+D + RE+ T K+ +PE+M FI+++ + F+ Sbjct: 53 NDK-ARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQI-TGRRLSARETMEGFAIGVQNVIDFAKVAFI-KVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRNEFASNFFR 299
BLAST of NO20G00300 vs. NCBI_GenBank
Match: EWM23494.1 (hypothetical protein Naga_100198g11 [Nannochloropsis gaditana]) HSP 1 Score: 110.9 bits (276), Expect = 6.200e-21 Identity = 56/177 (31.64%), Postives = 110/177 (62.15%), Query Frame = 0 Query: 76 YLLNLTKNGLNPVQAFRDAMNTEGFKAILDNSEIQHRVLKELPLLGAIEGFSKIKDNRRLSAEDTKKSFATGMDNLLNLANDAFFNKVNDPAKVSETVAKMATSPDPSIQALFQRAQSGEKEAVEALQDEFTKRHYTGLDGKAFREISMEQTASKMEQLPEMMHFIEKDPSLAQVFK 253 + + K+G++ V+ F ++ F++IL+N EIQHR+++ +P+LGA+ GF + + RRL+ ++T F+ G+ NLL + + + +N P ++E +A+++ S DP IQ LF+ A ++ +V L++ + Y G+D + +++ T K+ +PEM FI++DP +++VF+ Sbjct: 134 FFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREAR-GRRLTDQETTAGFSKGVRNLLEMFKTSAKHALN-PTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVFR 308
BLAST of NO20G00300 vs. NCBI_GenBank
Match: XP_005853961.1 (hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526] >EKU22395.1 hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 90.1 bits (222), Expect = 1.100e-14 Identity = 61/210 (29.05%), Postives = 104/210 (49.52%), Query Frame = 0 Query: 40 PFSRLQSTTG--SGSKTDSAQ--LPGNQEAEFTKPTNRVGYLLNLTKNGLNPVQAFRDAMNTEGFKAILDNSEIQHRVLKELPLLGAIEGFSKIKDNRRLSAEDTKKSFATGMDNLLNLANDAFFNKVNDPAKVSETVAKMATSPDPSIQALFQRAQSGEKEAVEALQDEFTKRHYTGLDGKAFREISMEQTASKMEQLPEMMHFIEKDP 246 P R+QS TG SG+ D + LP KP + + + KNGL+ ++ F + + G KAILD+ E QH++++ LPLL A +GF +I RRL T F G++++L D + DP+ + ++++ +I F A +G+ A++ + + K+ Y G++ + +S SK+ E+M I DP Sbjct: 25 PMRRMQSLTGVLSGAAKDVMEDTLPA------YKPDGELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEI-TGRRLDDAGTTAGFTAGLNSILKTLPD-MLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDP 226
BLAST of NO20G00300 vs. NCBI_GenBank
Match: EWM24107.1 (hypothetical protein Naga_100286g4 [Nannochloropsis gaditana]) HSP 1 Score: 89.4 bits (220), Expect = 1.900e-14 Identity = 61/210 (29.05%), Postives = 104/210 (49.52%), Query Frame = 0 Query: 40 PFSRLQSTTG--SGSKTDSAQ--LPGNQEAEFTKPTNRVGYLLNLTKNGLNPVQAFRDAMNTEGFKAILDNSEIQHRVLKELPLLGAIEGFSKIKDNRRLSAEDTKKSFATGMDNLLNLANDAFFNKVNDPAKVSETVAKMATSPDPSIQALFQRAQSGEKEAVEALQDEFTKRHYTGLDGKAFREISMEQTASKMEQLPEMMHFIEKDP 246 P R+QS TG SG+ D + LP KP + + + KNGL+ ++ F + + G KAILD+ E QH++++ LPLL A +GF +I RRL T F G++++L D + DP+ + ++++ +I F A +G+ A++ + + K+ Y G++ + +S SK+ E+M I DP Sbjct: 25 PMRRMQSLTGVLSGAAKDVMEDTLPA------YKPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEI-TGRRLDDAGTTAGFTAGLNSILKTLPD-MLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDP 226
BLAST of NO20G00300 vs. NCBI_GenBank
Match: XP_005854240.1 (hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526] >EKU22120.1 hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 65.1 bits (157), Expect = 3.900e-7 Identity = 28/79 (35.44%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 76 YLLNLTKNGLNPVQAFRDAMNTEGFKAILDNSEIQHRVLKELPLLGAIEGFSKIKDNRRLSAEDTKKSFATGMDNLLNL 155 + + K+G++ V+ F ++ F++IL+N EIQHR+++ +P+LGA+ GF + + RRL+ ++T F+ G+ NLL + Sbjct: 80 FFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREAR-GRRLTDQETTAGFSKGVRNLLEM 157 The following BLAST results are available for this feature:
BLAST of NO20G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00300 ID=NO20G00300|Name=NO20G00300|organism=Nannochloropsis oceanica|type=gene|length=2614bpback to top protein sequence of NO20G00300.1 >NO20G00300.1-protein ID=NO20G00300.1-protein|Name=NO20G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=275bpback to top protein sequence of NO20G00300.2 >NO20G00300.2-protein ID=NO20G00300.2-protein|Name=NO20G00300.2|organism=Nannochloropsis oceanica|type=polypeptide|length=275bpback to top Synonyms
Publications
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