NO20G00160, NO20G00160 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G00160
Unique Name	NO20G00160
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3559
Alignment location	chr20:58283..61841 -

Link to JBrowse

Properties


Property Name	Value
Description	Importin subunit alpha

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:58283..61841 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0005515	protein binding
GO:0061608	nuclear import signal receptor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR000225	Armadillo

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport
GO:0006606	protein import into nucleus

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm
GO:0005634	nucleus

Homology

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: CDO52110.1 (similar to Saccharomyces cerevisiae YNL189W SRP1 Karyopherin alpha homolog [Galactomyces candidum])

HSP 1 Score: 73.6 bits (179), Expect = 3.100e-9
Identity = 116/234 (49.57%), Postives = 157/234 (67.09%), Query Frame = 0

Query:  117 VFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFLDDIQPRLQVEAAWLLTNLSSGSSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVASLRTTVWVLTNLVNRKQLFDFHREGWADVPFVVSRLGWLLNHVEDKEVICDASWALRSLLSNRPGVGRSEMVERMCSVGIGNALLVAMINAASSGVR 351
            ++SD+ E Q +  V +R+++   IN P +   VI+AGFVP+ + FL      LQ E++W LTN++SG+SE   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++ L  +VW L+NL   K      R  W+ +   +  L  L+ ++ED+ V+ D  W++  L+ N+P     E ++ +   GI    L+A+++  SS V+
Sbjct:   89 LYSDNVEAQTQATVAIRKMLSIEINPPID--IVIKAGFVPRFIEFLHSSHKLLQFESSWALTNIASGTSEQTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSLLEHSVWTLSNLCRGK----LPRPEWSIISQAIPVLSKLI-YLEDQNVLVDCCWSVSYLVDNQP-----EKIQVVLETGIPKR-LIALLSHKSSAVQ 309

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: XP_001828605.1 (importin alpha protein [Coprinopsis cinerea okayama7#130] >EAU93208.1 importin alpha protein [Coprinopsis cinerea okayama7#130])

HSP 1 Score: 72.0 bits (175), Expect = 8.900e-9
Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 0

Query:  111 QERLQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFLDDIQPRLQVEAAWLLTNLSSGSSEH 188
            +E +  VFSDDPE Q     + R+L+    N P E   VI  G VP+ V FL   QP LQ EAAW LTN++SG++EH
Sbjct:   76 EEMISGVFSDDPERQLDATTKFRKLLSKEKNPPIE--RVIECGVVPRFVEFLKHGQPMLQFEAAWALTNIASGTAEH 150

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: XP_008246117.1 (PREDICTED: importin subunit alpha-4 [Prunus mume])

HSP 1 Score: 71.6 bits (174), Expect = 1.200e-8
Identity = 83/289 (28.72%), Postives = 126/289 (43.60%), Query Frame = 0

Query:   64 DASRPARLDALKSILSFLTPGEVQAFLEVGIGPEEQLVFEGLRQEVMQER--------LQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFLD-DIQPRLQVEAAWLLTNLSSGSSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVASLRTTVWVLTNLVNRKQLFDFHREGWADVPFVVSRLGWLLNHVEDKEVICDASWALRSLLSNRPGVGRSEMVERMCSVGIGNALLVAMIN 344
            D +R  R D L  I               G+ P +Q + +G +  V+ E+        +Q V+SDDP  Q +   + R+L+    + P +   VI+AG VP+ V FL     P+LQ EAAW LTN++SG+S+H                           XXXXXXXXXXXXX                        ++ LR   W L+N    K    F +   A +P +       L ++ D+EV+ DA WAL S LS+ P    ++ ++ +   G+   L+  +I+
Sbjct:   23 DQARRRREDNLVEIRXXXXXXXXXXXXXXGLPPSQQQLLDGTQTAVVFEKRLESIPSMVQGVWSDDPALQLEATTQFRKLLSIERSPPID--EVIKAGAVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSDHTRVVIEHGAVPMFVQLLSSGSDDVREQXXXXXXXXXXXXXSCRDLVLGQGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPATPFDQVKPA-LPILRQ-----LIYLNDEEVLTDACWAL-SYLSDGP----NDKIQAVIEAGVCQRLMELLIH 298

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: XP_010440459.1 (PREDICTED: importin subunit alpha-5-like [Camelina sativa])

HSP 1 Score: 71.6 bits (174), Expect = 1.200e-8
Identity = 63/243 (25.93%), Postives = 92/243 (37.86%), Query Frame = 0

Query:   94 IGPEEQLVFEGLRQEVMQERLQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFL-DDIQPRLQVEAAWLLTNLSSGSSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVASLRTTVWVLTNLVNRKQL--FDFHREGWADVPFVVSRLGWLLNHVEDKEVICDASWALRSLLSNRPGVGRSEMVERMCSVGI 334
            + P+    F+ L +  + + +  VFSDDP  Q +  +  RR V S   TP    +VI+ G VP+ V FL  D  PRLQ EAAW LTN++SG+SEH                                                                +  LR   W L+N    K L  FD  +     +  +V        H  D+EV+ DA WAL +L       G ++ ++ +   G+
Sbjct:   56 LSPDHDEPFQSLLE--VSDMIAGVFSDDPSLQLESTIRFRR-VLSLERTP-PIDSVIKCGVVPRFVEFLKKDDYPRLQFEAAWALTNIASGTSEHTKVVIDLGAVPLFVQLLASPDNDVREQALWGLGNVAGDSVHCRDFVLNSGAMTPLLHQLNKNATLPILRVATWTLSNFFRGKPLPPFDLVKPALPALERLV--------HSNDEEVLVDACWALSNLSD-----GSNKKIQGLIEAGV 281

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: XP_010482208.1 (PREDICTED: importin subunit alpha-5-like [Camelina sativa])

HSP 1 Score: 71.2 bits (173), Expect = 1.500e-8
Identity = 63/243 (25.93%), Postives = 91/243 (37.45%), Query Frame = 0

Query:   94 IGPEEQLVFEGLRQEVMQERLQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFL-DDIQPRLQVEAAWLLTNLSSGSSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVASLRTTVWVLTNLVNRKQL--FDFHREGWADVPFVVSRLGWLLNHVEDKEVICDASWALRSLLSNRPGVGRSEMVERMCSVGI 334
            + P+    F+ L +  + + +  VFSDDP  Q +     RR V S   TP    +VI+ G VP+ V FL  D  PR+Q EAAW LTN++SG+SEH                                                                +  LR   W L+N    K L  FD  +     +  +V        H  D+EV+ DA WAL +L       G +E ++ +   G+
Sbjct:   56 LSPDHDEPFQSLLE--VSDMIAGVFSDDPSLQLESTTRFRR-VLSLERTP-PIDSVIKCGVVPRFVEFLKKDDYPRIQFEAAWALTNIASGTSEHTKVVIDLGAVPLFVQLLASPDDDVREQALWGLGNVAGDSVHCRDFVLNFGALTPLLHQLNKNATLPILRVATWTLSNFFRGKPLPPFDLVKPALPALERLV--------HSNDEEVLVDACWALSNLSD-----GSNEKIQGLIEAGV 281

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: GAQ88890.1 (importin alpha isoform [Klebsormidium nitens])

HSP 1 Score: 71.2 bits (173), Expect = 1.500e-8
Identity = 95/235 (40.43%), Postives = 127/235 (54.04%), Query Frame = 0

Query:  114 LQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFLDDIQ-PRLQVEAAWLLTNLSSGSSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVASLRTTVWVLTNLVNRKQLFDFHREGWADVPFVVSRLGWLLNHVEDKEVICDASWALRSLLSNRPGVGRSEMVERMCSVGIGNALLVAMINAASS 348
            +Q V SDD  TQ + + + R+L+    N P E   VIRAG VP  V FL     P+LQ EAAW LTN++SG+S+H                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        V+ LR   W L+N    K   +F +   A +P +       L H  D+EV+ DA WAL S LS+    G ++ ++ +   G+   L+  +++ ++S
Sbjct:   78 VQGVRSDDRNTQIEAVTQFRKLLSIERNPPIE--EVIRAGVVPLFVEFLKRTDYPQLQFEAAWALTNIASGTSDHTKVVIDHGAVPIFVQLLSSPSDDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLNEKSKVSMLRNATWTLSNFCRGKPQPNFEQSKPA-LPALER-----LIHTTDEEVLTDACWAL-SYLSD----GTNDKIQAVIEAGVCRRLVELLLHPSAS 299

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: XP_019187179.1 (PREDICTED: importin subunit alpha-4 [Ipomoea nil])

HSP 1 Score: 71.2 bits (173), Expect = 1.500e-8
Identity = 94/244 (38.52%), Postives = 127/244 (52.05%), Query Frame = 0

Query:  106 RQEVMQERLQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFL--DDIQPRLQVEAAWLLTNLSSGSSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVASLRTTVWVLTNLVNRKQLFDFHREGWADVPFVVSRLGWLLNHVEDKEVICDASWALRSLLSNRPGVGRSEMVERMCSVGIGNALLVAMINAASS 348
            R E +   +Q V+SDDP  Q     + R+L+    + P +   VIRAG VP+ V FL   D+ P+LQ EAAW LTN++SG+SEH                         XXXXXXXXXXXXXXXXXXXXXXXXXXXX           ++ LR   W L+N    K    F     A V   +  L  L+ H+ D+EV+ DA WAL S LS+ P    +E ++ +   G+   L+  +++ + S
Sbjct:   76 RLESIPLMVQGVWSDDPSVQIDATTQFRKLLSIERSPPID--EVIRAGVVPRFVQFLGRQDL-PQLQFEAAWALTNVASGTSEHTRVVIDQGAVPMFVQLLSSPSDDVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLAQLNENSKLSMLRNATWTLSNFCRGKPATPF-----AQVKPALPVLQQLI-HLNDEEVLTDACWAL-SYLSDGP----NEKIQAVIEAGVCPRLVELLLHPSPS 305

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: XP_007205030.1 (importin subunit alpha-4 [Prunus persica] >ONI04238.1 hypothetical protein PRUPE_6G310800 [Prunus persica] >ONI04239.1 hypothetical protein PRUPE_6G310800 [Prunus persica])

HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8
Identity = 82/284 (28.87%), Postives = 123/284 (43.31%), Query Frame = 0

Query:   64 DASRPARLDALKSILSFLTPGEVQAFLEVGIGPEEQLVFEGLRQEVMQER--------LQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFLD-DIQPRLQVEAAWLLTNLSSGSSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVASLRTTVWVLTNLVNRKQLFDFHREGWADVPFVVSRLGWLLNHVEDKEVICDASWALRSLLSNRPGVGRSEMVERMCSVGIGNALL 339
            D +R  R D L  I               G+ P +Q + +G +  V+ E+        +Q V+SDDP  Q +   + R+L+    + P +   VI+AG VP+ V FL     P+LQ EAAW LTN++SG+S+H                           XXXXXXXXXXXXX                        ++ LR   W L+N    K    F +   A +P +       L ++ D+EV+ DA WAL S LS+ P    ++ ++ +   G+   L+
Sbjct:   23 DQARRRREDNLVEIRXXXXXXXXXXXXXXGLPPSQQQLLDGTQTAVVFEKRLESIPSMVQGVWSDDPALQLEATTQFRKLLSIERSPPID--EVIKAGAVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSDHTRVVIEHGAVPMFVQLLSSGSDDVREQXXXXXXXXXXXXXSCRDLVLGQGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPATPFDQVKPA-LPILRQ-----LIYLNDEEVLTDACWAL-SYLSDGP----NDKIQAVIEAGVCQRLM 293

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: ONI04241.1 (hypothetical protein PRUPE_6G310800 [Prunus persica])

HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8
Identity = 82/284 (28.87%), Postives = 123/284 (43.31%), Query Frame = 0

Query:   64 DASRPARLDALKSILSFLTPGEVQAFLEVGIGPEEQLVFEGLRQEVMQER--------LQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFLD-DIQPRLQVEAAWLLTNLSSGSSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVASLRTTVWVLTNLVNRKQLFDFHREGWADVPFVVSRLGWLLNHVEDKEVICDASWALRSLLSNRPGVGRSEMVERMCSVGIGNALL 339
            D +R  R D L  I               G+ P +Q + +G +  V+ E+        +Q V+SDDP  Q +   + R+L+    + P +   VI+AG VP+ V FL     P+LQ EAAW LTN++SG+S+H                           XXXXXXXXXXXXX                        ++ LR   W L+N    K    F +   A +P +       L ++ D+EV+ DA WAL S LS+ P    ++ ++ +   G+   L+
Sbjct:   23 DQARRRREDNLVEIRXXXXXXXXXXXXXXGLPPSQQQLLDGTQTAVVFEKRLESIPSMVQGVWSDDPALQLEATTQFRKLLSIERSPPID--EVIKAGAVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSDHTRVVIEHGAVPMFVQLLSSGSDDVREQXXXXXXXXXXXXXSCRDLVLGQGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPATPFDQVKPA-LPILRQ-----LIYLNDEEVLTDACWAL-SYLSDGP----NDKIQAVIEAGVCQRLM 293

[Close]

BLAST of NO20G00160 vs. NCBI_GenBank
Match: ONI04240.1 (hypothetical protein PRUPE_6G310800 [Prunus persica])

HSP 1 Score: 70.9 bits (172), Expect = 2.000e-8
Identity = 82/284 (28.87%), Postives = 123/284 (43.31%), Query Frame = 0

Query:   64 DASRPARLDALKSILSFLTPGEVQAFLEVGIGPEEQLVFEGLRQEVMQER--------LQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVIRAGFVPKIVSFLD-DIQPRLQVEAAWLLTNLSSGSSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVASLRTTVWVLTNLVNRKQLFDFHREGWADVPFVVSRLGWLLNHVEDKEVICDASWALRSLLSNRPGVGRSEMVERMCSVGIGNALL 339
            D +R  R D L  I               G+ P +Q + +G +  V+ E+        +Q V+SDDP  Q +   + R+L+    + P +   VI+AG VP+ V FL     P+LQ EAAW LTN++SG+S+H                           XXXXXXXXXXXXX                        ++ LR   W L+N    K    F +   A +P +       L ++ D+EV+ DA WAL S LS+ P    ++ ++ +   G+   L+
Sbjct:   23 DQARRRREDNLVEIRXXXXXXXXXXXXXXGLPPSQQQLLDGTQTAVVFEKRLESIPSMVQGVWSDDPALQLEATTQFRKLLSIERSPPID--EVIKAGAVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSDHTRVVIEHGAVPMFVQLLSSGSDDVREQXXXXXXXXXXXXXSCRDLVLGQGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPATPFDQVKPA-LPILRQ-----LIYLNDEEVLTDACWAL-SYLSDGP----NDKIQAVIEAGVCQRLM 293

The following BLAST results are available for this feature:

BLAST of NO20G00160 vs. NCBI_GenBank

BLAST of NO20G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
CDO52110.1	3.100e-9	49.57	similar to Saccharomyces cerevisiae YNL189W SRP1 K...	[more]
XP_001828605.1	8.900e-9	48.05	importin alpha protein [Coprinopsis cinerea okayam...	[more]
XP_008246117.1	1.200e-8	28.72	PREDICTED: importin subunit alpha-4 [Prunus mume]	[more]
XP_010440459.1	1.200e-8	25.93	PREDICTED: importin subunit alpha-5-like [Camelina...	[more]
XP_010482208.1	1.500e-8	25.93	PREDICTED: importin subunit alpha-5-like [Camelina...	[more]
GAQ88890.1	1.500e-8	40.43	importin alpha isoform [Klebsormidium nitens]	[more]
XP_019187179.1	1.500e-8	38.52	PREDICTED: importin subunit alpha-4 [Ipomoea nil]	[more]
XP_007205030.1	2.000e-8	28.87	importin subunit alpha-4 [Prunus persica] >ONI0423...	[more]
ONI04241.1	2.000e-8	28.87	hypothetical protein PRUPE_6G310800 [Prunus persic...	[more]
ONI04240.1	2.000e-8	28.87	hypothetical protein PRUPE_6G310800 [Prunus persic...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL021	nonsL021	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR020	ncniR020	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR067	ngnoR067	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002540	NSK002540	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO20G00160.1	NO20G00160.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|671844	gene_6225	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO20G00160.1	NO20G00160.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO20G00160 ID=NO20G00160|Name=NO20G00160|organism=Nannochloropsis oceanica|type=gene|length=3559bp
CGGGGATCACACTCCGAAAACCTTACCCCCCATATTCTCCTCAACTCCTT
TATACACACGCATATAAGCACAGAGCTCAATAAAAATGGGTGATACCACA
ACAATTAGCAGTAATATAGCAGAAAGGAGGGAGAAGGTGACAATCAGCAG
CAAGATGGGTGAAGAGGGAGGAAAAAGGGTAGGAGGGGCAGGGACAGGAG
TAGGAGGAGCAGGAGTCGAAGCAGGTGCTGAGCCCGCACAATCCGAGGCT
GGTACACTTGGAGCTATCATCATGGATGCCTCCCGTCCTGCCCGCCTGGA
TGCGTTGAAATCCATCCTCTCCTTCCTGACACCTGGGGAGGTGCAGGCTT
TCCTGGAGGTTGGTATCGGGCCGGAGGAGCAGCTGGTCTTCGAGGGGCTT
CGCCAAGAAGgtagggagcgtgtgactgtgtgactgcttatatacctcgt
tataggagcttttgctctgaaaattcctcttctccttcgtgtgcaccttc
acccctagccctccgtcccattccctcctctctctcctttccttcccatc
ccacagTCATGCAAGAGAGGCTTCAGCAAGTCTTCAGTGACGATCCCGAA
ACCCAACACAAGGGCCTTGTTGAGCTCCGCCGCCTTGTGTGTTCTACCAT
AAACACACCTTATGAATGCAGCGCCGTCATCCGCGCCGGCTTTGTCCCAA
AGgtaagacgcctctctccctccttccatctcaacccctttcttcccccc
atcatccccgatctatgtccttcacttacctttcctattcctctgcttgt
actttacccctcttactccttcagATTGTCTCTTTTCTTGACGACATACA
GCCTCGACTGCAAGTGGAGGCCGCCTGGCTTCTCACCAATCTTTCCTCCG
gtgcgtctcctgcctccccactctccttatttctcgctcttctttctgtc
cactctctctcggtctaattctatttgttcacttatttgtctttatattt
cccttacgcccttcctccctttctgcctagGCTCTAGCGAGCATACCTCC
ATCGTCGTAGCACATGACGCCATCCCTCCCCTTGTCCGCCTCCTCACCTC
CGACAACCCCGAGGTCGGGACGCAGTGTGCATGGGCGCTAGGCAATATCG
CTGGGGACAATACTAAGgtgcctcttttctcttatctgaggccttcacct
gccgtatcatgcccctgctgctctgcgttcggactctcacacccttcttc
ctcctctctccctccctagCATCGGGACCTGGTCCTTGCTCACGGTATCA
TCCACCCACTGCTTCAGACGTGGACTGCTCAACGCGATGTGGCCTCCTTA
CGGACCACCGTGTGGGTGCTGgtgaggacggaaggagggacggaaggagg
gagggagggagggagggagggagggagggagggaggataataactaagca
tagcaggagggatacaaatcagaatcccgatcgagagtcaagatgagaga
accgccattccaatatgtaccactctggcacaacctaaattactgctcac
atcccttttttttttcctttttcccatgagACCAACCTCGTAAATCGCAA
GCAGCTTTTTGATTTCCACCGGGAAGGTTGGGCTGATGTCCCCTTCGTTG
TGTCCCGCCTCGGCTGGCTCCTAAACCACGTCGAAGATAAGgtccgaccg
ctttctccttctcccttcctccaattattggcttcatttgggatttaatc
tctacctgttactaccttaatattcttcctagGAGGTGATCTGCGACGCT
TCCTGGGCTTTACGCTCTCTGCTTAGCAATCGGCCTGGGGTGGGTCGGTC
GGAGATGGTCGAGCGCATGTGCTCGGTTGGGATCGGGAACGCCTTACTGG
TAGCTATGATCAATGCTGCGgtatgtaaggactgagatgaaaagaagggc
tagacggtgtgaaatagagattgaatattcgcgcgcacatgcccacttcc
acattcacatgtatacggagagatggacattcattcatattcgcgcgcat
gaagacactgtgcttctttcactttcttgtacccctccatatcgctcata
ttcgaaacactaagcctttcctttcacaaacacacagTCGAGCGGCGTGC
GCCGCCATGCCGAGATTTTAGTCACCAAGCTGACGATTGGTGGCTATGAC
CGTGACGCTTACCCTCACTCCTGGTCCTTCTACAAAAAAGCCTTGATTGT
CTTGAACATgtaaggagggagagcagggacgtggaagtagaatagaaata
gtcgacaattgaaaaggaacgatttttaacccgcgcgctcacatttcctg
ttttccgtgccaagcgaaggatcctgcactcattctttcatccatacccc
ctccctctcgccacctatttcttctcctgacagGAAAGCGGAACATCGGC
TTTTCAAGGTTCGGCAGTACTGCGCTTTTGCTACTGCTAACCTCTTGGCC
CCAATTTCGCGCAAGACTGAACATGTCGACGATGGCCCCTCTCCCCACGC
CCCCTCCCAAGTCTCTGACGCTGTCTCTCTGCTGCTGGACCATATTTATT
CTCCCTACCCTCCTCCTCTACCATCGGAAGATGCTCAGGAGGAAACAAAC
AAGACATCGGAAGAGCGACAAGAAGAGCGAGAAAATCTGGAGCGCCAAGA
GAAGGAAGTAGGAGAAGACCTGAGACTGGAAGCTGCTTGGGCCTTGAAGA
GGATCCTGGTCGAAGCATGCAGGTATAACCGAGATCTGGCTTACCAGACG
AGTTGGGCACGTGAAGGATTGTTAAGGGTAGTGCGGCGATTAATACAACA
AGCACAAGCGACAACGGGAGATGACAAGAAAGAAAAGAGTGGAAGGAGTC
TGACAGTGAAAGACAAAGAGTGGAAGGAGGCAGAGAAGCAGGGACGGAGG
AATGGTCGTGGAGACGGGCATGAAAGTGATGACAATAACAGTAAAGTACC
AGCTTACGAACCCCGACGCCATATGGGTCTAGTGTTGGCGCTCTTGGAAT
GTGTGGACGCATACATTACTGCCCCATTTTCCCTCCATCAGTCGTCATCT
CCTTCTTTTTCTGCAATCCCCGCAACGACTGATTCTTCCACGGCCCTGCA
CAAAGCAGATAGAGGTAGCCACCAAGGACAGAACAACGGCAACGTCAGTG
ACGCAGAAGTGAATCCTGCACCGGTGGTAGCGGCGGCAGCAAAGGGCATG
GTGGCAGCCACAGCAACGCAGAAAGATATGCGGAATTTGCGGGCTGTGGC
GCAAACCCTGGACAGGCACTTTATGGGAAACAAGGGAGCGAGAGGGAGCT
TTCTGAAGGCCAGTGATGATAAAGCGGGACGAGAGAAAGGAGGGGCCAGC
GGAGGCTTTGCACGAATGATGGTGCCTGTCTTCGAGGCGCTTGGCGGCAA
ATTTGCTTCGACTAGCGTCACACAGAAGTTGATGGTGCTCCAAAAGAAGA
TCGACGAGTTCGTGATGGCGGTTAAGAATGAGGAAAAGCAGATGACGGAA
ACAAAATGA

protein sequence of NO20G00160.1

>NO20G00160.1-protein ID=NO20G00160.1-protein|Name=NO20G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=761bp
MGDTTTISSNIAERREKVTISSKMGEEGGKRVGGAGTGVGGAGVEAGAEP
AQSEAGTLGAIIMDASRPARLDALKSILSFLTPGEVQAFLEVGIGPEEQL
VFEGLRQEVMQERLQQVFSDDPETQHKGLVELRRLVCSTINTPYECSAVI
RAGFVPKIVSFLDDIQPRLQVEAAWLLTNLSSGSSEHTSIVVAHDAIPPL
VRLLTSDNPEVGTQCAWALGNIAGDNTKHRDLVLAHGIIHPLLQTWTAQR
DVASLRTTVWVLTNLVNRKQLFDFHREGWADVPFVVSRLGWLLNHVEDKE
VICDASWALRSLLSNRPGVGRSEMVERMCSVGIGNALLVAMINAASSGVR
RHAEILVTKLTIGGYDRDAYPHSWSFYKKALIVLNMKAEHRLFKVRQYCA
FATANLLAPISRKTEHVDDGPSPHAPSQVSDAVSLLLDHIYSPYPPPLPS
EDAQEETNKTSEERQEERENLERQEKEVGEDLRLEAAWALKRILVEACRY
NRDLAYQTSWAREGLLRVVRRLIQQAQATTGDDKKEKSGRSLTVKDKEWK
EAEKQGRRNGRGDGHESDDNNSKVPAYEPRRHMGLVLALLECVDAYITAP
FSLHQSSSPSFSAIPATTDSSTALHKADRGSHQGQNNGNVSDAEVNPAPV
VAAAAKGMVAATATQKDMRNLRAVAQTLDRHFMGNKGARGSFLKASDDKA
GREKGGASGGFARMMVPVFEALGGKFASTSVTQKLMVLQKKIDEFVMAVK
NEEKQMTETK*

Synonyms

Publications