NO20G00140, NO20G00140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00140 vs. NCBI_GenBank
Match: XP_005854422.1 (protein-tyrosine low molecular weight [Nannochloropsis gaditana CCMP526] >EKU21935.1 protein-tyrosine low molecular weight [Nannochloropsis gaditana CCMP526] >EWM22228.1 arsenate reductase [Nannochloropsis gaditana]) HSP 1 Score: 155.2 bits (391), Expect = 1.500e-34 Identity = 75/110 (68.18%), Postives = 84/110 (76.36%), Query Frame = 0 Query: 24 VHEYLSGEETTTHFQPFLVSQAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAELEAERAG 134 V Y +G + + P +AI +M+ IGYDLS HDSKSLEEV+ FAPFDAVVTMGCGDACPWMPAKR VNWTI DPKHMEPEEFNKIRDYI+ LV +LL ELE G Sbjct: 37 VEAYSAGSKPSGVVNP----KAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDELETGNDG 142
BLAST of NO20G00140 vs. NCBI_GenBank
Match: WP_086103834.1 (arsenate reductase ArsC [Chitinophagaceae bacterium IBVUCB2] >OSZ81379.1 low molecular weight phosphatase family protein [Chitinophagaceae bacterium IBVUCB2]) HSP 1 Score: 152.9 bits (385), Expect = 7.400e-34 Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 0 Query: 24 VHEYLSGEETTTHFQPFLVSQAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAELE 129 + Y +G + + P +AIAAM+ +GYDL HDSKSLEEVK FAPFDAVVTMGCGDACPWMPAK+F++W I DPKHMEP+EFNK+RDYIK LV+DLL L+ Sbjct: 31 IEAYSAGSKPSGIVNP----KAIAAMKELGYDLGEHDSKSLEEVKQFAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHMEPQEFNKVRDYIKSLVSDLLISLK 131
BLAST of NO20G00140 vs. NCBI_GenBank
Match: OYY22533.1 (low molecular weight phosphatase family protein [Sphingobacteriia bacterium 35-40-8] >OYZ48337.1 low molecular weight phosphatase family protein [Bacteroidetes bacterium 24-39-8] >OZA68706.1 low molecular weight phosphatase family protein [Sphingobacteriia bacterium 39-39-8]) HSP 1 Score: 146.0 bits (367), Expect = 9.000e-32 Identity = 62/84 (73.81%), Postives = 75/84 (89.29%), Query Frame = 0 Query: 44 QAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAEL 128 +AIAAM+ +GYDLS HDSKSL++V+ +APFDAVVTMGCGDACPWMPAKRFV+W I DPKHMEPE+FN++RDYI G V +L+ EL Sbjct: 48 KAIAAMKELGYDLSTHDSKSLQDVEQYAPFDAVVTMGCGDACPWMPAKRFVDWQIPDPKHMEPEQFNEVRDYISGKVKELILEL 131
BLAST of NO20G00140 vs. NCBI_GenBank
Match: OYU56249.1 (low molecular weight phosphatase family protein [Chitinophagaceae bacterium BSSC1]) HSP 1 Score: 145.6 bits (366), Expect = 1.200e-31 Identity = 65/104 (62.50%), Postives = 82/104 (78.85%), Query Frame = 0 Query: 24 VHEYLSGEETTTHFQPFLVSQAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAEL 128 + Y +G + + P +AIAAM+ +GYDLS HDSKSL+EV+ +APFDAVVTMGCGDACPWMPAKRFV+W I DPK+MEPE+FN++RDYI G V +L+ EL Sbjct: 32 IEAYSAGSKPSGIVNP----KAIAAMKELGYDLSTHDSKSLQEVEQYAPFDAVVTMGCGDACPWMPAKRFVDWQIPDPKYMEPEQFNEVRDYISGKVKELILEL 131
BLAST of NO20G00140 vs. NCBI_GenBank
Match: WP_039130166.1 (arsenate reductase ArsC [Flavihumibacter sp. ZG627] >KIC90926.1 protein tyrosine phosphatase [Flavihumibacter sp. ZG627]) HSP 1 Score: 141.7 bits (356), Expect = 1.700e-30 Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 0 Query: 23 AVHEYLSGEETTTHFQPFLVSQAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAEL 128 AV Y +G + + P +AIAAM+ +GYDLS HDSKSL+EV+ APFDAVVTMGCGDACPWMPA++F++W I DPKHMEPE FN++RDYI V +L+A L Sbjct: 31 AVEAYSAGSKPSGIVNP----KAIAAMKELGYDLSTHDSKSLQEVEKHAPFDAVVTMGCGDACPWMPARQFIDWQIPDPKHMEPEAFNEVRDYIASKVRELIANL 131
BLAST of NO20G00140 vs. NCBI_GenBank
Match: WP_051347726.1 (arsenate reductase ArsC [Asinibacterium sp. OR43]) HSP 1 Score: 138.3 bits (347), Expect = 1.900e-29 Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = 0 Query: 18 LYHPIAVHEYLSGEETTTHFQPFLVSQAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAEL 128 LY AV + +G + + P +AIAAM+ +GYDLS HDSKSL+EV+ +APFDAVVTMGCGDACPWMPAK+F++W I DPKH+EP EFN+IRD I V L+A L Sbjct: 32 LYGGDAVEAFSAGSKPSGIVNP----KAIAAMKELGYDLSKHDSKSLQEVEQYAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHLEPAEFNQIRDMIGEKVKQLIASL 137
BLAST of NO20G00140 vs. NCBI_GenBank
Match: SDW60391.1 (Protein-tyrosine-phosphatase [Hydrobacter penzbergensis]) HSP 1 Score: 137.5 bits (345), Expect = 3.200e-29 Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0 Query: 18 LYHPIAVHEYLSGEETTTHFQPFLVSQAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAEL 128 +Y AV + +G + + P +AIAAM+ +GYDLS HDSKSL+EV+ +APFDAVVTMGCGDACPWMPAK+F++W I DPKH+EP EFN+IRD I V L+A L Sbjct: 52 IYGGDAVEAFSAGSKPSGIVNP----KAIAAMKELGYDLSKHDSKSLQEVEQYAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHLEPAEFNQIRDMIGEKVKQLIASL 157
BLAST of NO20G00140 vs. NCBI_GenBank
Match: WP_092723056.1 (MULTISPECIES: arsenate reductase ArsC [Chitinophagaceae]) HSP 1 Score: 137.5 bits (345), Expect = 3.200e-29 Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0 Query: 18 LYHPIAVHEYLSGEETTTHFQPFLVSQAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAEL 128 +Y AV + +G + + P +AIAAM+ +GYDLS HDSKSL+EV+ +APFDAVVTMGCGDACPWMPAK+F++W I DPKH+EP EFN+IRD I V L+A L Sbjct: 25 IYGGDAVEAFSAGSKPSGIVNP----KAIAAMKELGYDLSKHDSKSLQEVEQYAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHLEPAEFNQIRDMIGEKVKQLIASL 130
BLAST of NO20G00140 vs. NCBI_GenBank
Match: PQV60776.1 (protein-tyrosine-phosphatase [Vibrionimonas magnilacihabitans]) HSP 1 Score: 137.5 bits (345), Expect = 3.200e-29 Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0 Query: 18 LYHPIAVHEYLSGEETTTHFQPFLVSQAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAEL 128 +Y AV + +G + + P +AIAAM+ +GYDLS HDSKSL+EV+ +APFDAVVTMGCGDACPWMPAK+F++W I DPKH+EP EFN+IRD I V L+A L Sbjct: 36 IYGGDAVEAFSAGSKPSGIVNP----KAIAAMKELGYDLSKHDSKSLQEVEQYAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHLEPAEFNQIRDMIGEKVKQLIASL 141
BLAST of NO20G00140 vs. NCBI_GenBank
Match: WP_026768278.1 (arsenate reductase ArsC [Asinibacterium sp. OR53]) HSP 1 Score: 137.1 bits (344), Expect = 4.200e-29 Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0 Query: 18 LYHPIAVHEYLSGEETTTHFQPFLVSQAIAAMRAIGYDLSAHDSKSLEEVKSFAPFDAVVTMGCGDACPWMPAKRFVNWTITDPKHMEPEEFNKIRDYIKGLVTDLLAEL 128 +Y AV + +G + + P +AIAAM+ +GYDLS HDSKSL+EV+ +APFDAVVTMGCGDACPWMPAK+F++W I DPKH+EP EFN+IRD I V L+A L Sbjct: 25 IYGGDAVEAFSAGSKPSGIVNP----KAIAAMKELGYDLSKHDSKSLQEVEQYAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHLEPVEFNQIRDMIGEKVKQLIASL 130 The following BLAST results are available for this feature:
BLAST of NO20G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00140 ID=NO20G00140|Name=NO20G00140|organism=Nannochloropsis oceanica|type=gene|length=1210bpback to top protein sequence of NO20G00140.1 >NO20G00140.1-protein ID=NO20G00140.1-protein|Name=NO20G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=142bpback to top Synonyms
Publications
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