NO20G00110, NO20G00110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00110 vs. NCBI_GenBank
Match: EWM22222.1 (hypothetical protein Naga_100312g4 [Nannochloropsis gaditana]) HSP 1 Score: 159.8 bits (403), Expect = 1.500e-35 Identity = 104/218 (47.71%), Postives = 117/218 (53.67%), Query Frame = 0 Query: 122 MLHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQESRFNASLHFTLASRQLMGDPLYRCPLAAKQVEEDPPELRPSSSELLRSSWGRDXXXXXXXXXXXXXXXXXXXRVLRVAPRAGTGAEHVFPPFXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLYARSVSLPLAARPPSLLSLDG----RERRADTFNYSSYKRETAGECRQRDSME 336 MLHFSVRQ +RRTGA+KRVG+LDINMSE+++AG K LCLLQESRFNASLHFTLA RQL GDPLYRCPLAAKQV+++PPELRP SSELLR FPPF +S SLP A SLLS + R+RRA TFNY SYKR A R DS+E Sbjct: 1 MLHFSVRQVNRRTGAVKRVGVLDINMSEFVSAGNKAALCLLQESRFNASLHFTLACRQLSGDPLYRCPLAAKQVKDNPPELRPRSSELLRLP---------------------------------------FPPFPTSADSSSPYPLSPAGSSSLPRS--------TQSASLP--APVASLLSAEALEEWRDRRALTFNYESYKRSLARRNRVADSVE 169
BLAST of NO20G00110 vs. NCBI_GenBank
Match: SAM00710.1 (hypothetical protein [Absidia glauca]) HSP 1 Score: 73.2 bits (178), Expect = 1.900e-9 Identity = 42/133 (31.58%), Postives = 70/133 (52.63%), Query Frame = 0 Query: 49 RSLKFEVTLTIHGLLHYP-QSGRLFVKWKDGQGSYGLTKAVNVSTRDYTVRWEIPFTFLASFRVDNESNILLPRMLHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQESRFNASLHFTLASRQL 181 R +++E+ L I + + P SG FVKW+ ++ +D+TV W T +A V ++ ++L P L + Q TGA K++G L INMSEY +G T LL+E +FN+ + ++ +Q+ Sbjct: 12 RKVEYEINLVIQDITNIPLVSGSYFVKWRLRNATHSTGVTTKEPIKDHTVEWFSSVTTMAEL-VISKQHMLQPCELKLEIYQEVGGTGAAKQMGSLSINMSEYATSGSITRRYLLEECKFNSFIKLSIDMKQV 143
BLAST of NO20G00110 vs. NCBI_GenBank
Match: CEG83274.1 (hypothetical protein RMATCC62417_17227 [Rhizopus microsporus]) HSP 1 Score: 70.9 bits (172), Expect = 9.400e-9 Identity = 51/164 (31.10%), Postives = 85/164 (51.83%), Query Frame = 0 Query: 40 FPPLRRASSRSLKFEVTLTIHGLLHYP-QSGRLFVKWKDGQGSYGLTKAVNVSTRDYTVRWEIPFTFLASFRVDNESNILLPRMLHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQESRFNASLHFTL-ASRQLMGDPLYRC-PLAAKQVEEDPP 201 F L + SR + FEV++ I L++ P SG +V WK ++ +V +D+ V W P ++ +D + +L L + Q G IK +G L IN+SEY +G T+ LLQ+ +FN+++ TL + + G P ++ PL+ KQ+ +D P Sbjct: 4 FSHLFVSKSRKVPFEVSIIIRDLVNIPLVSGYYYVSWKLKHATHTGGSTPSVHIKDHQVTWNYPINTMSKLVID-KHQVLSDCELKLEIYQ----KGGIK-IGTLSINLSEYAGSGVITERYLLQDCKFNSTIKLTLRMNTKSDGYPQFQTPPLSRKQIFKDIP 161
BLAST of NO20G00110 vs. NCBI_GenBank
Match: CEG65082.1 (hypothetical protein RMATCC62417_01946 [Rhizopus microsporus] >CEI95929.1 hypothetical protein RMCBS344292_10103 [Rhizopus microsporus]) HSP 1 Score: 70.9 bits (172), Expect = 9.400e-9 Identity = 50/162 (30.86%), Postives = 80/162 (49.38%), Query Frame = 0 Query: 40 FPPLRRASSRSLKFEVTLTIHGLLHYP-QSGRLFVKWKDGQGSYGLTKAVNVSTRDYTVRWEIPFTFLASFRVDNESNILLPRMLHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQESRFNASLHFTLASRQLMGDPLYRCPLAAKQVEEDPP 201 F L + SR + FEV++ I L++ P SG +V WK ++ +V +D+ V W P ++ +D + +L L + Q G IK +G L IN+SEY +G T+ LLQ+ +FN+++ TL D PL+ KQ+ +D P Sbjct: 4 FSHLFVSKSRKVPFEVSIIIRDLVNIPLVSGYYYVSWKLKHATHTGGSTPSVHIKDHQVTWNYPINTMSKLVID-KHQVLSDCELKLEIYQ----KGGIK-IGTLSINLSEYAGSGVITERYLLQDCKFNSTIKLTL-RMNTKSDSYPHPPLSRKQIFKDIP 158
BLAST of NO20G00110 vs. NCBI_GenBank
Match: XP_023467048.1 (hypothetical protein RHIMIDRAFT_118834 [Rhizopus microsporus ATCC 52813] >PHZ13340.1 hypothetical protein RHIMIDRAFT_118834 [Rhizopus microsporus ATCC 52813]) HSP 1 Score: 70.1 bits (170), Expect = 1.600e-8 Identity = 51/164 (31.10%), Postives = 85/164 (51.83%), Query Frame = 0 Query: 40 FPPLRRASSRSLKFEVTLTIHGLLHYP-QSGRLFVKWKDGQGSYGLTKAVNVSTRDYTVRWEIPFTFLASFRVDNESNILLPRMLHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQESRFNASLHFTL-ASRQLMGDPLYRC-PLAAKQVEEDPP 201 F L + SR + FEV++ I L++ P SG +V WK ++ +V +D+ V W P ++ +D + +L L + Q G IK +G L IN+SEY +G T+ LLQ+ +FN+++ TL + + G P ++ PL+ KQ+ +D P Sbjct: 4 FSHLFVSKSRKVPFEVSIIIRDLVNIPLVSGYYYVSWKLKHATHTGGSTPSVHIKDHQVTWNYPINTMSKLVID-KHQMLSDCELKLEIYQ----KGGIK-IGTLSINLSEYAGSGVITERYLLQDCKFNSTIKLTLRMNTKSDGYPQFQTPPLSRKQIFKDIP 161
BLAST of NO20G00110 vs. NCBI_GenBank
Match: ORE14488.1 (hypothetical protein BCV71DRAFT_257978 [Rhizopus microsporus]) HSP 1 Score: 68.9 bits (167), Expect = 3.600e-8 Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 0 Query: 46 ASSRSLKFEVTLTIHGLLHYP-QSGRLFVKWKDGQGSYGLTKAVNVSTRDYTVRWEIPFTFLASFRVDNESNILLPRMLHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQESRFNASLHFTLASRQLMGD-PLYRC-PLAAKQVEEDPP 201 + SR + FEV++ I L++ P SG +V WK ++ +V +D+ V W P ++ +D + +L L + Q G IK +G L IN+SEY +G T+ LLQ+ +FN+++ TL P ++ PL+ KQ+ +D P Sbjct: 33 SKSRKVPFEVSIIIRDLVNIPLVSGYYYVSWKLKHATHTGGSTPSVHIKDHQVTWNYPINTMSKLVID-KHQVLSDCELKLEIYQ----KGGIK-IGTLSINLSEYAGSGVITERYLLQDCKFNSTIKLTLRMNTKSDSYPQFQTPPLSRKQIFKDIP 184
BLAST of NO20G00110 vs. NCBI_GenBank
Match: XP_005706952.1 (hypothetical protein isoform 2 [Galdieria sulphuraria] >EME30432.1 hypothetical protein Gasu_23350 isoform 2 [Galdieria sulphuraria]) HSP 1 Score: 68.6 bits (166), Expect = 4.700e-8 Identity = 57/167 (34.13%), Postives = 77/167 (46.11%), Query Frame = 0 Query: 53 FEVTLTIHGLLHYPQS-GRLFVKWK----DGQGSYGLTKAVNVSTRDYTVRWEIPFTFLASFRVDNESNILLPRM-LHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQESRFNASLHFTLASRQLMGDPLYRCPLAAKQVEEDPPELRPSSSELLRSS 214 F+VTL + L +P S G +F KWK +G TK V TV W FTF E L L S+R+ + G I R GI++++++EY LLQESR NA L +L RQ GDP ++ P + +V PSSS+ SS Sbjct: 11 FQVTLVLEELRQFPLSHGTIFAKWKLQPQVADPHFGFTKRTQVVRN--TVIWNDRFTFSVKLGAAGERGEELRSCGLRISIRE-EKNIGHI-RHGIIELDLAEYAGLPTVRKNFLLQESRTNAVLSLSLTLRQTSGDPTFKRPFKSVKV------TLPSSSDTQNSS 167
BLAST of NO20G00110 vs. NCBI_GenBank
Match: XP_005706953.1 (hypothetical protein isoform 1 [Galdieria sulphuraria] >EME30433.1 hypothetical protein Gasu_23350 isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 68.6 bits (166), Expect = 4.700e-8 Identity = 57/167 (34.13%), Postives = 77/167 (46.11%), Query Frame = 0 Query: 53 FEVTLTIHGLLHYPQS-GRLFVKWK----DGQGSYGLTKAVNVSTRDYTVRWEIPFTFLASFRVDNESNILLPRM-LHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQESRFNASLHFTLASRQLMGDPLYRCPLAAKQVEEDPPELRPSSSELLRSS 214 F+VTL + L +P S G +F KWK +G TK V TV W FTF E L L S+R+ + G I R GI++++++EY LLQESR NA L +L RQ GDP ++ P + +V PSSS+ SS Sbjct: 11 FQVTLVLEELRQFPLSHGTIFAKWKLQPQVADPHFGFTKRTQVVRN--TVIWNDRFTFSVKLGAAGERGEELRSCGLRISIRE-EKNIGHI-RHGIIELDLAEYAGLPTVRKNFLLQESRTNAVLSLSLTLRQTSGDPTFKRPFKSVKV------TLPSSSDTQNSS 167
BLAST of NO20G00110 vs. NCBI_GenBank
Match: XP_021579387.1 (protein FAM102A [Ictidomys tridecemlineatus]) HSP 1 Score: 67.4 bits (163), Expect = 1.000e-7 Identity = 40/148 (27.03%), Postives = 71/148 (47.97%), Query Frame = 0 Query: 49 RSLKFEVTLTIHGLLHYP-QSGRLFVKWKDGQGSYGLTKAVNVSTRDYTVRWEIPFTFLASFRVDNESNILLPRMLHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQ------ESRFNASLHFTLASRQLMGDPLYRCP 190 + KF+ T T+ L P +G LF K + G ++ + ++ VRW FTF+ + + +L P + SVR+ +GA+ ++G D+N++E+ +G CLL+ + N+ L T+ L GDP ++ P Sbjct: 8 KKFKFQTTFTLEELTAVPFVNGVLFCKVRLLDGGDFVSLSSREEVQENCVRWRKRFTFVCKMSANPATGLLDPCVFRVSVRKVRLGSGALSQLGFADLNLAEFAGSGSTVRCCLLEGYDTKNTRQDNSILKVTIGMFLLSGDPCFKTP 155
BLAST of NO20G00110 vs. NCBI_GenBank
Match: OAD08475.1 (hypothetical protein MUCCIDRAFT_154927 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 67.0 bits (162), Expect = 1.400e-7 Identity = 50/171 (29.24%), Postives = 79/171 (46.20%), Query Frame = 0 Query: 40 FPPLRRASSRSLKFEVTLTIHGLLHYP-QSGRLFVKWKDGQGSYGLTKAVNVSTRDYTVRWEIPFTFLASFRVDNESNILLPRMLHFSVRQTHRRTGAIKRVGILDINMSEYLAAGRKTDLCLLQESRFNASLHFTL--------ASRQLMGDPLYRC-PLAAKQVEEDPP 201 F L + SR + FE++L I L++ P SG +V WK S+ V +D+ + W P + V N+ +L L + Q K +G L IN+SEY +G T+ LLQ +FN+++ +L S Q P ++ PL+ KQ+ +D P Sbjct: 5 FTHLFISKSRKVNFELSLIIRDLVNVPLVSGYYYVNWKLRNASHTTGTTERVHIKDHQITWNHPINTMIQL-VINKQQVLNDCELKLDIYQK-----GGKEIGTLSINLSEYAGSGVTTERYLLQNCKFNSTIKLSLRMNIKPDSTSNQPSSYPQFQTPPLSRKQIFKDIP 169 The following BLAST results are available for this feature:
BLAST of NO20G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00110 ID=NO20G00110|Name=NO20G00110|organism=Nannochloropsis oceanica|type=gene|length=2510bpback to top protein sequence of NO20G00110.1 >NO20G00110.1-protein ID=NO20G00110.1-protein|Name=NO20G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=363bpback to top Synonyms
Publications
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