NO20G00070, NO20G00070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00070 vs. NCBI_GenBank
Match: EWM27856.1 (Mannosyltransferase 1, CMT1 [Nannochloropsis gaditana]) HSP 1 Score: 196.1 bits (497), Expect = 3.300e-46 Identity = 137/450 (30.44%), Postives = 185/450 (41.11%), Query Frame = 0 Query: 41 LPPSL--PRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLF----------------------------------SP----------------------------------------------EHQHRLP-------------------------YDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDARTD---LAXXXXXXXXXXXXXXXXXXXXXXXXAVRACYLEPGPRKKNKRVDYSTCSTRP 381 LPP + R++ A NLKDNE +M ++ +L + +P+ +VSIYES S D T L L+ EL + + + G++RR +EDRI FL +MRN A+ PL+ SP +H L +D +VF+NDVYFC +++LRLL +A ACG+DF + D + + FYD+WVARD EG+RFQ PFV H S + G FPV+CCWNG+ ++A PFYRGLRFR+ RP + SECS LC D WA+G V++DP V LAYD T A AV C+LE G RK V + C+ RP Sbjct: 233 LPPDIFERRIYIAANLKDNEGIMANMIEQLTLLASLYPDPGAHLFVSIYESGSTDATCRWLGLLQDELREMGVPSEVVAGGEKRRVGEEDRIQFLARMRNEAMAPLYRMHLKEGEIGAERGGSSSQATKGAGWGRRLAGEGSPRRDAGRMRNGIEISMGSNDIREMEAYESSEARGSTRPPLGSKVGDGDHSEALQGLGPSTRAIRTLVVDQGGRENRHDRFDHVVFLNDVYFCAYEILRLLL------YNADLACGLDFFLEPFPD-LHPDTAAVRKELTFYDLWVARDEEGQRFQWAQPFVKHVRGQS----RQDAEGDAEYEEAFPVFCCWNGLAVLDAAPFYRGLRFRSVRPGEGVISECSNLCTDLWANGHRKVVLDPQVKLAYDEPTYEQLHALKPPRYPSLYRVDREIERVVEAPRAVDTCFLETGRRKLGAMVRFEECAARP 671
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_005649421.1 (hypothetical protein COCSUDRAFT_65574 [Coccomyxa subellipsoidea C-169] >EIE24877.1 hypothetical protein COCSUDRAFT_65574 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 186.4 bits (472), Expect = 2.600e-43 Identity = 127/321 (39.56%), Postives = 161/321 (50.16%), Query Frame = 0 Query: 41 LPPSLP------RVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLF--------SPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFK---KPAWTDGIWR---AFKGLYTGPR---------------FYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDART 327 + PSLP R F A NL +NE L+PH +LL L P GS YVSIYES S+DRT E L+ L+ L L + +I T G R EDRI FL ++RN AL PL+ + D+IVF+NDV+FC V+RLL+ DG++ CGMDF + W D WR A + + GP FYD WV+RD+ G F PFVLH L+ K G PFPV CCWNG+ M + PF +G +FR R SE SL+C+DF +G +VDP V AY T Sbjct: 47 IDPSLPQIAERQRFFVASNLHNNEKLLPHFTLQLLSLLLQLPKGS--TYVSIYESGSRDRTGEWLELLQSLLLLLEVPSSIVTGGL-TRAEGEDRIDFLAQVRNRALEPLWRGAGGNGSAAVSGEGFRADRIVFVNDVFFCARDVVRLLA--QDGDL----LCGMDFHVDVREGW-DRHWRNIPAAEIMPYGPHGPQLGYKHQNHDHLIFYDSWVSRDLSGIPFANSRPFVLHQYSLARLQK----------GLPFPVSCCWNGLAVMNSAPFQQGYQFRTHRRGECEASEGSLMCEDFLRAGYQKFIVDPGVRQAYFPET 347
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_005648314.1 (hypothetical protein COCSUDRAFT_63293 [Coccomyxa subellipsoidea C-169] >EIE23770.1 hypothetical protein COCSUDRAFT_63293 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 171.4 bits (433), Expect = 8.800e-39 Identity = 115/295 (38.98%), Postives = 142/295 (48.14%), Query Frame = 0 Query: 43 PSLPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQH--RLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTD----------GIWRAFKGLYTGP---RFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAY 323 P+ RVFFA NL+DN LMPH ++L T+ P GS A+VSIYES S D T G + R +DRI L MRN A + + R D++VFINDVYFC LRLL V A AC MDF + W D G+ + P +FYD+WVARDVEG+ PFV H L R G PFPV CCWNGM+++ AEPF G FRA +SE S++C DF G + +VDP+V LAY Sbjct: 5 PAGQRVFFASNLRDNAPLMPHYITQMLFTVTALPVGS--AFVSIYESGSTDAT-----------------------GGKARPDGKDRIHHLAHMRNLATKKMRQGPNGELPRWHADRLVFINDVYFCARDALRLLH-----HVSADLACSMDFLQ--WKDAPSTVNVYPYGVDGPPLSVVADPEKLQFYDVWVARDVEGKPLSNTSPFVNHGYSLQRL----------RRGLPFPVSCCWNGMLSINAEPFRLGYEFRAGGEGECRESETSVMCKDFLRMGYSNFIVDPAVRLAY 257
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_005643851.1 (hypothetical protein COCSUDRAFT_48903 [Coccomyxa subellipsoidea C-169] >EIE19307.1 hypothetical protein COCSUDRAFT_48903 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 171.0 bits (432), Expect = 1.200e-38 Identity = 121/361 (33.52%), Postives = 160/361 (44.32%), Query Frame = 0 Query: 45 LPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLF---------------SPEHQ--HRL---------------------PYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKP---------------------------------------AWTD--GIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYR-GLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDAR 326 L R A N+ +NE ++PH +L+ A P E A++SIYES S D T L+ L+ L A+ I H I G R +DE RI FL + RN AL PL+ PE + HR+ P +++VF+NDV+FC V+RLL + A ACGMDF +P +W D I AFK + FYDIWVARD +G F ++ P+V P L + G PFPV CCWNG+V + + PF R +R R + SECSLLC+DF G +VDP+V LAY R Sbjct: 170 LERYLIAANMHNNEDVLPHFIIQLVHLFAVLP--PETAFLSIYESGSTDSTGAWLEVLQHLLAAMQIPHRIVIGGSLTRAKDEGRIEFLAQARNRALEPLWLNGSLPTSTSLLLPHDPEARPLHRVVDRKLSAWGLPSGKARAKPMWPAERVVFLNDVFFCARDVVRLL------QHRADMACGMDFDRPKLEEMPWQFQRRRFAEYWARNWVPTWLGMQLSRIGPILFSWRDRPAIKEAFKA-ESPMEFYDIWVARDSDGNLFLKETPYVTDPYSLDRIAR----------GLPFPVKCCWNGLVVLNSAPFLRHNVRVRGHKKGECAASECSLLCNDFLRLGYSKFVVDPNVRLAYTHR 511
BLAST of NO20G00070 vs. NCBI_GenBank
Match: CEO95885.1 (hypothetical protein PBRA_004598 [Plasmodiophora brassicae]) HSP 1 Score: 168.7 bits (426), Expect = 5.700e-38 Identity = 106/283 (37.46%), Postives = 147/283 (51.94%), Query Frame = 0 Query: 41 LPPSLPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYD 324 +PP F A N+ DNE +PHL +L + + S YVSI+ES S D + E L L+A +++++I T RR E RI FL ++RN AL PLF + Q D ++F+NDV+ C ++RL V+ E ACGMDF+ + T FYD WVA D+ G PF G+ R R P PV+CCWNGM+A++A PFY G+RFR+ SEC+L C D W +G G++L+DP+V +AYD Sbjct: 138 IPPG--NYFIAANVHDNEKTLPHLLHQLKRVVDIIGDPSR-VYVSIFESGSTDLSKEWLYMFADVLDAKNVSNSIVT-SDLRRLLHEHRIDFLARVRNKALEPLFQSK-QSGFKADYVLFVNDVFMCAEDLIRLAQRVSLPE--TDMACGMDFE--------FDPDHSYSTEITFYDTWVALDLAGNFLSSMYPFF---------GRTHDRDRLLR-SEPVPVFCCWNGMIAVKAAPFYEGIRFRSESSGCR-ASECTLFCKDMWNAGHGNILIDPTVAVAYD 394
BLAST of NO20G00070 vs. NCBI_GenBank
Match: OZJ06553.1 (hypothetical protein BZG36_00525 [Bifiguratus adelaidae]) HSP 1 Score: 167.2 bits (422), Expect = 1.700e-37 Identity = 116/315 (36.83%), Postives = 159/315 (50.48%), Query Frame = 0 Query: 26 YIAECKPPQLPKHPSL-PPSLPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEAL-DALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLF---SPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFY-RGLRFRAAR----PSLPI-----QSECSLLCDDFWASGLGHVLVDPSVTLAYDAR 326 Y+ + + LP SL PS +FALNL +NEA++P + +L + LA G E +VSI+E+ S D TP L + L+ L+ + I ER RI++L ++RN AL PL+ P R +D+IVF+ND+ FC VL L + + CG+D+ W D P FYD WVARD+ G F +DP P+ A + R G PF YCCWNGM M +PFY G+RFR + P++P SECSLLC DFW +G G V+ P V +AY+ R Sbjct: 83 YLIQAQSRYLPLRQSLSTPSPVTYYFALNLYNNEAILPDMIHQLAQVLAHL--GPEHCFVSIFENGSTDETPNLLRNVFSSVLDVLNTPYEIRLSKTERT-PGAHRIAYLAQVRNQALAPLYRLAKPPTSRR--FDQIVFLNDILFCKDDVLEL--IYQQSLQGSDMTCGLDYDL-QWGD-----------VPLFYDNWVARDITGLSFYKDP-----SAPIRSASADLYTR-----GIPFQSYCCWNGMNVMNPKPFYEHGVRFRKGQDTIDPNIPDTGECGASECSLLCKDFWHTGYGKVVHVPRVKVAYEER 368
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_005852769.1 (capsular associated protein [Nannochloropsis gaditana CCMP526] >EKU23064.1 capsular associated protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 162.9 bits (411), Expect = 3.100e-36 Identity = 91/229 (39.74%), Postives = 117/229 (51.09%), Query Frame = 0 Query: 155 YDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDARTD---LAXXXXXXXXXXXXXXXXXXXXXXXXAVRACYLEPGPRKKNKRVDYSTCSTRP 381 +D +VF+NDVYFC +++LRLL +A ACG+DF + D + + FYD+WVARD EG+RFQ PFV H S + G FPV+CCWNG+ ++A PFYRGLRFR+ RP + SECS LC D WA+G V++DP V LAYD T A AV C+LE G RK V + C+ RP Sbjct: 73 FDHVVFLNDVYFCAYEILRLLL------YNADLACGLDFFLEPFPD-LHPDTAAVRKELTFYDLWVARDEEGQRFQWAQPFVKHVRGQS----RQDAEGDAEYEEAFPVFCCWNGLAVLDAAPFYRGLRFRSVRPGEGVISECSNLCTDLWANGHRKVVLDPQVKLAYDEPTYEQLHALKPPRYPSLYRVDREIERVVEAPRAVDTCFLETGRRKLGAMVRFEECAARP 290
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_002947233.1 (hypothetical protein VOLCADRAFT_103314 [Volvox carteri f. nagariensis] >EFJ51823.1 hypothetical protein VOLCADRAFT_103314 [Volvox carteri f. nagariensis]) HSP 1 Score: 162.2 bits (409), Expect = 5.300e-36 Identity = 108/329 (32.83%), Postives = 148/329 (44.98%), Query Frame = 0 Query: 49 FFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFS----------PEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDF---KKPAWTD--------------------------------GIWRAFKGLYT------GPR-FYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRG-LRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDA 325 FFA N++D + +MP+ L+ TL + +VSIYES SKDRT + L L +ALSI + + G +R E+RI FL ++R+ A+ L+ P +I+F+NDV F ++RLL D CG+D +P TD WR F Y GP FYD WVARD+ G F P+V + P + R GR P V+CCWNG+ + AEPF R + FR R + SECSLLCDD W G +++DP+V + YDA Sbjct: 117 FFATNVRDAQRVMPNYMYHLILTLGSLSSHDNPIFVSIYESGSKDRTSDWLRTLGEVFDALSIPNRLDLGGTIQRETGEERIHFLARLRSAAIAALYGQCAARGYFCPPSEGRNNASGRIIFLNDVLFTSTDIMRLLQYPAD------MVCGLDMGMAAEPDMTDREHQETLAAYLQAKWLLPSRFAASLSRLGKLRKHWRKFHKKYEPHLREFGPLFFYDKWVARDISGRMFTNREPYVAYQPSID-------RVVAGR---PVRVHCCWNGLAVINAEPFVRKVVDFREHRENECSASECSLLCDDMWRYGYDDIIMDPNVRVTYDA 429
BLAST of NO20G00070 vs. NCBI_GenBank
Match: CEO96556.1 (hypothetical protein PBRA_005165 [Plasmodiophora brassicae]) HSP 1 Score: 161.4 bits (407), Expect = 9.100e-36 Identity = 98/297 (33.00%), Postives = 149/297 (50.17%), Query Frame = 0 Query: 27 IAECKPPQLPKHPSLPPSLPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYD 324 +A+ P + P + +L + +FALNL ++E ++ + A+L ++ G + +VSIYES S D T + L L+ L A I H + + RG+ + RI FL +RN + PL++ E D +VFINDV+FC V RL + G+ C MDF + + FYDIWV RD+ G+ P+ + + G P PVY CWNG+ + A+ F RG+RFR+ + + SEC L C D W SG G++L+DP+VT+ Y+ Sbjct: 67 VADLCPRRYP-NGTLGMPAGKYYFALNLHESENVVGPIIAQLERLMSAL--GPDRMFVSIYESGSLDTTAQWLRVLQRILSARRIPHALKS-DMNSRGKQQHRIDFLATVRNIVMEPLYNGE----FAADFVVFINDVFFCADDVARLAQRIALGD-QVEMVCAMDFVATPDSKML------------FYDIWVTRDMAGQEVSGFYPYFQRSSDIERL----------KAGLPIPVYSCWNGLTVISADVFARGIRFRSGTDGMCMASECFLFCKDVWDSGPGNILIDPAVTVFYE 332
BLAST of NO20G00070 vs. NCBI_GenBank
Match: OLY81346.1 (Alpha-1,3-mannosyltransferase CMT1 [Smittium mucronatum]) HSP 1 Score: 159.5 bits (402), Expect = 3.500e-35 Identity = 98/283 (34.63%), Postives = 145/283 (51.24%), Query Frame = 0 Query: 47 RVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQ----SECSLLCDDFWASGLGHVLVDPSVTLAYDAR 326 + FF++NL +NE +P+L +L++ F GSE ++SIYE+ S D+T + L L+ I H I T Q R ++ RI +L K+RN AL PL + + R+ YDKI+F+ND+YFC +L L + + + C +DF G +F D WVARD+EG F ++ + + P E R R PF V C WNG+ + +PFY R R +L I+ SECSLLC+DFW G ++V P + ++Y R Sbjct: 80 KFFFSMNLFNNEETIPYLILELMQLFKFL--GSENIFLSIYENGSVDKTKDLLHEFSAYLKKFDIKHRIVTEKQS-RPKNSHRIEYLAKVRNRALEPLEEEKIKGRI-YDKIIFMNDIYFCRNDILEL--IYQSDFQGSDFTCPLDF----------HTISGEEPLIKFRDGWVARDIEGYGFVKELNSLSYHP-------ESKLRNEQRL--PFQVQCSWNGVAVLNPKPFYDKKPLRFRRSNLDIRECSASECSLLCNDFWDRGYRRIIVVPEILVSYRLR 337 The following BLAST results are available for this feature:
BLAST of NO20G00070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00070 ID=NO20G00070|Name=NO20G00070|organism=Nannochloropsis oceanica|type=gene|length=4987bpback to top protein sequence of NO20G00070.1 >NO20G00070.1-protein ID=NO20G00070.1-protein|Name=NO20G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=623bpback to top protein sequence of NO20G00070.2 >NO20G00070.2-protein ID=NO20G00070.2-protein|Name=NO20G00070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=623bpback to top protein sequence of NO20G00070.3 >NO20G00070.3-protein ID=NO20G00070.3-protein|Name=NO20G00070.3|organism=Nannochloropsis oceanica|type=polypeptide|length=462bpback to top Synonyms
Publications
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