NO20G00070, NO20G00070 (gene) Nannochloropsis oceanica

Overview
NameNO20G00070
Unique NameNO20G00070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4987
Alignment locationchr20:21897..27692 +

Link to JBrowse

Properties
Property NameValue
DescriptionAlpha-1,3-mannosyltransferase CMT1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:21897..27692 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021047Mannosyltransferase_CMT1
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO20G00070 vs. NCBI_GenBank
Match: EWM27856.1 (Mannosyltransferase 1, CMT1 [Nannochloropsis gaditana])

HSP 1 Score: 196.1 bits (497), Expect = 3.300e-46
Identity = 137/450 (30.44%), Postives = 185/450 (41.11%), Query Frame = 0
Query:   41 LPPSL--PRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLF----------------------------------SP----------------------------------------------EHQHRLP-------------------------YDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDARTD---LAXXXXXXXXXXXXXXXXXXXXXXXXAVRACYLEPGPRKKNKRVDYSTCSTRP 381
            LPP +   R++ A NLKDNE +M ++  +L    + +P+     +VSIYES S D T   L  L+ EL  + +   +   G++RR  +EDRI FL +MRN A+ PL+                                  SP                                              +H   L                          +D +VF+NDVYFC +++LRLL        +A  ACG+DF    + D +      +     FYD+WVARD EG+RFQ   PFV H    S     +   G       FPV+CCWNG+  ++A PFYRGLRFR+ RP   + SECS LC D WA+G   V++DP V LAYD  T     A                        AV  C+LE G RK    V +  C+ RP
Sbjct:  233 LPPDIFERRIYIAANLKDNEGIMANMIEQLTLLASLYPDPGAHLFVSIYESGSTDATCRWLGLLQDELREMGVPSEVVAGGEKRRVGEEDRIQFLARMRNEAMAPLYRMHLKEGEIGAERGGSSSQATKGAGWGRRLAGEGSPRRDAGRMRNGIEISMGSNDIREMEAYESSEARGSTRPPLGSKVGDGDHSEALQGLGPSTRAIRTLVVDQGGRENRHDRFDHVVFLNDVYFCAYEILRLLL------YNADLACGLDFFLEPFPD-LHPDTAAVRKELTFYDLWVARDEEGQRFQWAQPFVKHVRGQS----RQDAEGDAEYEEAFPVFCCWNGLAVLDAAPFYRGLRFRSVRPGEGVISECSNLCTDLWANGHRKVVLDPQVKLAYDEPTYEQLHALKPPRYPSLYRVDREIERVVEAPRAVDTCFLETGRRKLGAMVRFEECAARP 671          
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_005649421.1 (hypothetical protein COCSUDRAFT_65574 [Coccomyxa subellipsoidea C-169] >EIE24877.1 hypothetical protein COCSUDRAFT_65574 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 186.4 bits (472), Expect = 2.600e-43
Identity = 127/321 (39.56%), Postives = 161/321 (50.16%), Query Frame = 0
Query:   41 LPPSLP------RVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLF--------SPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFK---KPAWTDGIWR---AFKGLYTGPR---------------FYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDART 327
            + PSLP      R F A NL +NE L+PH   +LL  L   P GS   YVSIYES S+DRT E L+ L+  L  L +  +I T G   R   EDRI FL ++RN AL PL+        +         D+IVF+NDV+FC   V+RLL+   DG++     CGMDF    +  W D  WR   A + +  GP                FYD WV+RD+ G  F    PFVLH   L+   K          G PFPV CCWNG+  M + PF +G +FR  R      SE SL+C+DF  +G    +VDP V  AY   T
Sbjct:   47 IDPSLPQIAERQRFFVASNLHNNEKLLPHFTLQLLSLLLQLPKGS--TYVSIYESGSRDRTGEWLELLQSLLLLLEVPSSIVTGGL-TRAEGEDRIDFLAQVRNRALEPLWRGAGGNGSAAVSGEGFRADRIVFVNDVFFCARDVVRLLA--QDGDL----LCGMDFHVDVREGW-DRHWRNIPAAEIMPYGPHGPQLGYKHQNHDHLIFYDSWVSRDLSGIPFANSRPFVLHQYSLARLQK----------GLPFPVSCCWNGLAVMNSAPFQQGYQFRTHRRGECEASEGSLMCEDFLRAGYQKFIVDPGVRQAYFPET 347          
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_005648314.1 (hypothetical protein COCSUDRAFT_63293 [Coccomyxa subellipsoidea C-169] >EIE23770.1 hypothetical protein COCSUDRAFT_63293 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 171.4 bits (433), Expect = 8.800e-39
Identity = 115/295 (38.98%), Postives = 142/295 (48.14%), Query Frame = 0
Query:   43 PSLPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQH--RLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTD----------GIWRAFKGLYTGP---RFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAY 323
            P+  RVFFA NL+DN  LMPH   ++L T+   P GS  A+VSIYES S D T                       G + R   +DRI  L  MRN A   +    +    R   D++VFINDVYFC    LRLL       V A  AC MDF +  W D          G+      +   P   +FYD+WVARDVEG+      PFV H   L             R G PFPV CCWNGM+++ AEPF  G  FRA       +SE S++C DF   G  + +VDP+V LAY
Sbjct:    5 PAGQRVFFASNLRDNAPLMPHYITQMLFTVTALPVGS--AFVSIYESGSTDAT-----------------------GGKARPDGKDRIHHLAHMRNLATKKMRQGPNGELPRWHADRLVFINDVYFCARDALRLLH-----HVSADLACSMDFLQ--WKDAPSTVNVYPYGVDGPPLSVVADPEKLQFYDVWVARDVEGKPLSNTSPFVNHGYSLQRL----------RRGLPFPVSCCWNGMLSINAEPFRLGYEFRAGGEGECRESETSVMCKDFLRMGYSNFIVDPAVRLAY 257          
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_005643851.1 (hypothetical protein COCSUDRAFT_48903 [Coccomyxa subellipsoidea C-169] >EIE19307.1 hypothetical protein COCSUDRAFT_48903 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 171.0 bits (432), Expect = 1.200e-38
Identity = 121/361 (33.52%), Postives = 160/361 (44.32%), Query Frame = 0
Query:   45 LPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLF---------------SPEHQ--HRL---------------------PYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKP---------------------------------------AWTD--GIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYR-GLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDAR 326
            L R   A N+ +NE ++PH   +L+   A  P   E A++SIYES S D T   L+ L+  L A+ I H I   G   R +DE RI FL + RN AL PL+                PE +  HR+                     P +++VF+NDV+FC   V+RLL      +  A  ACGMDF +P                                       +W D   I  AFK   +   FYDIWVARD +G  F ++ P+V  P  L    +          G PFPV CCWNG+V + + PF R  +R R  +      SECSLLC+DF   G    +VDP+V LAY  R
Sbjct:  170 LERYLIAANMHNNEDVLPHFIIQLVHLFAVLP--PETAFLSIYESGSTDSTGAWLEVLQHLLAAMQIPHRIVIGGSLTRAKDEGRIEFLAQARNRALEPLWLNGSLPTSTSLLLPHDPEARPLHRVVDRKLSAWGLPSGKARAKPMWPAERVVFLNDVFFCARDVVRLL------QHRADMACGMDFDRPKLEEMPWQFQRRRFAEYWARNWVPTWLGMQLSRIGPILFSWRDRPAIKEAFKA-ESPMEFYDIWVARDSDGNLFLKETPYVTDPYSLDRIAR----------GLPFPVKCCWNGLVVLNSAPFLRHNVRVRGHKKGECAASECSLLCNDFLRLGYSKFVVDPNVRLAYTHR 511          
BLAST of NO20G00070 vs. NCBI_GenBank
Match: CEO95885.1 (hypothetical protein PBRA_004598 [Plasmodiophora brassicae])

HSP 1 Score: 168.7 bits (426), Expect = 5.700e-38
Identity = 106/283 (37.46%), Postives = 147/283 (51.94%), Query Frame = 0
Query:   41 LPPSLPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYD 324
            +PP     F A N+ DNE  +PHL  +L   +    + S   YVSI+ES S D + E L      L+A +++++I T    RR   E RI FL ++RN AL PLF  + Q     D ++F+NDV+ C   ++RL   V+  E     ACGMDF+        +       T   FYD WVA D+ G       PF          G+   R    R   P PV+CCWNGM+A++A PFY G+RFR+        SEC+L C D W +G G++L+DP+V +AYD
Sbjct:  138 IPPG--NYFIAANVHDNEKTLPHLLHQLKRVVDIIGDPSR-VYVSIFESGSTDLSKEWLYMFADVLDAKNVSNSIVT-SDLRRLLHEHRIDFLARVRNKALEPLFQSK-QSGFKADYVLFVNDVFMCAEDLIRLAQRVSLPE--TDMACGMDFE--------FDPDHSYSTEITFYDTWVALDLAGNFLSSMYPFF---------GRTHDRDRLLR-SEPVPVFCCWNGMIAVKAAPFYEGIRFRSESSGCR-ASECTLFCKDMWNAGHGNILIDPTVAVAYD 394          
BLAST of NO20G00070 vs. NCBI_GenBank
Match: OZJ06553.1 (hypothetical protein BZG36_00525 [Bifiguratus adelaidae])

HSP 1 Score: 167.2 bits (422), Expect = 1.700e-37
Identity = 116/315 (36.83%), Postives = 159/315 (50.48%), Query Frame = 0
Query:   26 YIAECKPPQLPKHPSL-PPSLPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEAL-DALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLF---SPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFY-RGLRFRAAR----PSLPI-----QSECSLLCDDFWASGLGHVLVDPSVTLAYDAR 326
            Y+ + +   LP   SL  PS    +FALNL +NEA++P +  +L + LA    G E  +VSI+E+ S D TP  L +     L+ L+  + I     ER      RI++L ++RN AL PL+    P    R  +D+IVF+ND+ FC   VL L  +       +   CG+D+    W D            P FYD WVARD+ G  F +DP       P+  A  +   R     G PF  YCCWNGM  M  +PFY  G+RFR  +    P++P       SECSLLC DFW +G G V+  P V +AY+ R
Sbjct:   83 YLIQAQSRYLPLRQSLSTPSPVTYYFALNLYNNEAILPDMIHQLAQVLAHL--GPEHCFVSIFENGSTDETPNLLRNVFSSVLDVLNTPYEIRLSKTERT-PGAHRIAYLAQVRNQALAPLYRLAKPPTSRR--FDQIVFLNDILFCKDDVLEL--IYQQSLQGSDMTCGLDYDL-QWGD-----------VPLFYDNWVARDITGLSFYKDP-----SAPIRSASADLYTR-----GIPFQSYCCWNGMNVMNPKPFYEHGVRFRKGQDTIDPNIPDTGECGASECSLLCKDFWHTGYGKVVHVPRVKVAYEER 368          
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_005852769.1 (capsular associated protein [Nannochloropsis gaditana CCMP526] >EKU23064.1 capsular associated protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 162.9 bits (411), Expect = 3.100e-36
Identity = 91/229 (39.74%), Postives = 117/229 (51.09%), Query Frame = 0
Query:  155 YDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDARTD---LAXXXXXXXXXXXXXXXXXXXXXXXXAVRACYLEPGPRKKNKRVDYSTCSTRP 381
            +D +VF+NDVYFC +++LRLL        +A  ACG+DF    + D +      +     FYD+WVARD EG+RFQ   PFV H    S     +   G       FPV+CCWNG+  ++A PFYRGLRFR+ RP   + SECS LC D WA+G   V++DP V LAYD  T     A                        AV  C+LE G RK    V +  C+ RP
Sbjct:   73 FDHVVFLNDVYFCAYEILRLLL------YNADLACGLDFFLEPFPD-LHPDTAAVRKELTFYDLWVARDEEGQRFQWAQPFVKHVRGQS----RQDAEGDAEYEEAFPVFCCWNGLAVLDAAPFYRGLRFRSVRPGEGVISECSNLCTDLWANGHRKVVLDPQVKLAYDEPTYEQLHALKPPRYPSLYRVDREIERVVEAPRAVDTCFLETGRRKLGAMVRFEECAARP 290          
BLAST of NO20G00070 vs. NCBI_GenBank
Match: XP_002947233.1 (hypothetical protein VOLCADRAFT_103314 [Volvox carteri f. nagariensis] >EFJ51823.1 hypothetical protein VOLCADRAFT_103314 [Volvox carteri f. nagariensis])

HSP 1 Score: 162.2 bits (409), Expect = 5.300e-36
Identity = 108/329 (32.83%), Postives = 148/329 (44.98%), Query Frame = 0
Query:   49 FFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFS----------PEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDF---KKPAWTD--------------------------------GIWRAFKGLYT------GPR-FYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRG-LRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYDA 325
            FFA N++D + +MP+    L+ TL    +     +VSIYES SKDRT + L  L    +ALSI + +   G  +R   E+RI FL ++R+ A+  L+           P         +I+F+NDV F    ++RLL    D        CG+D     +P  TD                                  WR F   Y       GP  FYD WVARD+ G  F    P+V + P +        R   GR   P  V+CCWNG+  + AEPF R  + FR  R +    SECSLLCDD W  G   +++DP+V + YDA
Sbjct:  117 FFATNVRDAQRVMPNYMYHLILTLGSLSSHDNPIFVSIYESGSKDRTSDWLRTLGEVFDALSIPNRLDLGGTIQRETGEERIHFLARLRSAAIAALYGQCAARGYFCPPSEGRNNASGRIIFLNDVLFTSTDIMRLLQYPAD------MVCGLDMGMAAEPDMTDREHQETLAAYLQAKWLLPSRFAASLSRLGKLRKHWRKFHKKYEPHLREFGPLFFYDKWVARDISGRMFTNREPYVAYQPSID-------RVVAGR---PVRVHCCWNGLAVINAEPFVRKVVDFREHRENECSASECSLLCDDMWRYGYDDIIMDPNVRVTYDA 429          
BLAST of NO20G00070 vs. NCBI_GenBank
Match: CEO96556.1 (hypothetical protein PBRA_005165 [Plasmodiophora brassicae])

HSP 1 Score: 161.4 bits (407), Expect = 9.100e-36
Identity = 98/297 (33.00%), Postives = 149/297 (50.17%), Query Frame = 0
Query:   27 IAECKPPQLPKHPSLPPSLPRVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLLCDDFWASGLGHVLVDPSVTLAYD 324
            +A+  P + P + +L     + +FALNL ++E ++  + A+L   ++    G +  +VSIYES S D T + L  L+  L A  I H + +     RG+ + RI FL  +RN  + PL++ E       D +VFINDV+FC   V RL   +  G+      C MDF     +  +            FYDIWV RD+ G+      P+      +             + G P PVY CWNG+  + A+ F RG+RFR+    + + SEC L C D W SG G++L+DP+VT+ Y+
Sbjct:   67 VADLCPRRYP-NGTLGMPAGKYYFALNLHESENVVGPIIAQLERLMSAL--GPDRMFVSIYESGSLDTTAQWLRVLQRILSARRIPHALKS-DMNSRGKQQHRIDFLATVRNIVMEPLYNGE----FAADFVVFINDVFFCADDVARLAQRIALGD-QVEMVCAMDFVATPDSKML------------FYDIWVTRDMAGQEVSGFYPYFQRSSDIERL----------KAGLPIPVYSCWNGLTVISADVFARGIRFRSGTDGMCMASECFLFCKDVWDSGPGNILIDPAVTVFYE 332          
BLAST of NO20G00070 vs. NCBI_GenBank
Match: OLY81346.1 (Alpha-1,3-mannosyltransferase CMT1 [Smittium mucronatum])

HSP 1 Score: 159.5 bits (402), Expect = 3.500e-35
Identity = 98/283 (34.63%), Postives = 145/283 (51.24%), Query Frame = 0
Query:   47 RVFFALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALDALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQHRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTDGIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEGRRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQ----SECSLLCDDFWASGLGHVLVDPSVTLAYDAR 326
            + FF++NL +NE  +P+L  +L++   F   GSE  ++SIYE+ S D+T + L      L+   I H I T  Q  R ++  RI +L K+RN AL PL   + + R+ YDKI+F+ND+YFC   +L L  +       + + C +DF              G     +F D WVARD+EG  F ++   + + P       E   R   R   PF V C WNG+  +  +PFY     R  R +L I+    SECSLLC+DFW  G   ++V P + ++Y  R
Sbjct:   80 KFFFSMNLFNNEETIPYLILELMQLFKFL--GSENIFLSIYENGSVDKTKDLLHEFSAYLKKFDIKHRIVTEKQS-RPKNSHRIEYLAKVRNRALEPLEEEKIKGRI-YDKIIFMNDIYFCRNDILEL--IYQSDFQGSDFTCPLDF----------HTISGEEPLIKFRDGWVARDIEGYGFVKELNSLSYHP-------ESKLRNEQRL--PFQVQCSWNGVAVLNPKPFYDKKPLRFRRSNLDIRECSASECSLLCNDFWDRGYRRIIVVPEILVSYRLR 337          
The following BLAST results are available for this feature:
BLAST of NO20G00070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27856.13.300e-4630.44Mannosyltransferase 1, CMT1 [Nannochloropsis gadit... [more]
XP_005649421.12.600e-4339.56hypothetical protein COCSUDRAFT_65574 [Coccomyxa s... [more]
XP_005648314.18.800e-3938.98hypothetical protein COCSUDRAFT_63293 [Coccomyxa s... [more]
XP_005643851.11.200e-3833.52hypothetical protein COCSUDRAFT_48903 [Coccomyxa s... [more]
CEO95885.15.700e-3837.46hypothetical protein PBRA_004598 [Plasmodiophora b... [more]
OZJ06553.11.700e-3736.83hypothetical protein BZG36_00525 [Bifiguratus adel... [more]
XP_005852769.13.100e-3639.74capsular associated protein [Nannochloropsis gadit... [more]
XP_002947233.15.300e-3632.83hypothetical protein VOLCADRAFT_103314 [Volvox car... [more]
CEO96556.19.100e-3633.00hypothetical protein PBRA_005165 [Plasmodiophora b... [more]
OLY81346.13.500e-3534.63Alpha-1,3-mannosyltransferase CMT1 [Smittium mucro... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002530NSK002530Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00070.1NO20G00070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G00070.2NO20G00070.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G00070.3NO20G00070.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|86833gene_6215Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100724g4gene8210Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00070.1NO20G00070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G00070.2NO20G00070.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G00070.3NO20G00070.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00070 ID=NO20G00070|Name=NO20G00070|organism=Nannochloropsis oceanica|type=gene|length=4987bp
ACAGGGTGGCACAGCAGTAGAAACAAACGGCTAGCTGAAGAAAAGGACGG
CCAAGCGAGATGGGAACTGGAAGAAGgtacgaagagcgtgaacgcaagag
gtcaggaaggtgcattcactctgcctcccctccgcctctccacagCACCC
CATTCCGACGCATGCATTGACCATTCCCAGCATCAGCAGCAGCCAAGCCC
ACATATCTAACCCATGCGCCGTCCCAACGAAGAGGAAGAAGAGGAGGGGG
GGAGGCGGAAGGTAAGGGCGATTCTGCCCCGCTCCTTTTGCATGATGTGC
CCCTCCCCTTGCAGGCCTCGGAGGGAGGGGTAAGACCCCGGCGGCTCCCT
CTCCCTTCCACCTCCCTCGCCATCGACTCAAGTGCTCTTAATCCTTTAAG
ACGGACATCCTTATCGCCCGCCTCGTCGAGGTACAGCTTTTATCAGGTGT
CACGAGgtgagcgaggccagagagagggggcaggatggtgcggatgggaa
ggaggggaaggggagaggggatttattcctcagaaatggcgaaacgagaa
cagcttgtgaagatggagagaaagatgtgcatttttgtgtcatcacctaa
taccttcgcattcttatctcctcttgtcggggaattaaacaagagggaac
cttattcgccctttcttgcttcctttccgtgccctcctcccccgccctcc
agGCCCCTCGTTCCTCTCCCCGCGTCGACGCTCCTTCCTCCAGCGACTGT
GCTCCCTCCTCGGCTTTCTCTTCCTCGCGTTCCTCTCCTCCTTATTTTGG
ATGTCTGACGGTCAGTCTGCATCCGGCTGGGTAGGAAGGGTAATGGTGCA
GGGCGGTTGGTGGACACCAGCCGCCTACATTGCTGAGgtagggggggagg
aagggaaggagggaaatagaaattgcatgccatggaggtattgtgagggc
ggacgtggatgccactttaccctctcaaacgaatccactggactccttct
tgattgatttacttaatgattcattcatccattcattcatccattcactc
attccttcactcattccttcactcattccttcactcattccgtcactcac
tctcaccttgccctcccactcacacccactggattcctccctccttcctc
agTGCAAACCTCCTCAGTTGCCAAAGCATCCCTCCCTTCCTCCCTCCCTG
CCCCGCGTCTTCTTTGCCTTGAACTTGAAGGACAATGAGGCCCTGATGCC
GCACCTGAGGGCGAAGCTGCTGGAGgtaccgatggaggaagggagggagg
ggagggagagaggagggggcgaagaaggcagaaagagggattccttgcat
gtcagcgacgtcacatctgacccggactgcgcacggacacgagtaccgtc
cttgtactgccctccacgcatacttcaccgagccttgctttaacctccaa
atatcccaccacttctcggtctcatgcacctgcaggggcccggcgctctc
cccctccagcagcactagtagtctagtgatgagggcaagcacccgcagta
aggagggatcgccctatctcaccacccccaccaccaccactaccaccata
accaagcaggagagggcgtggcgcagccattcgattctcatgcacgtccc
acctcatatctcgtctccccccacccgcacagACGCTAGCCTTCTTTCCC
AACGGCAGTGAGGGCGCGTACGTGTCCATCTATGAGAGCAACTCCAAGGA
CAGGACGCCCGAGGCCCTGGACGCCCTCAAGGTGGAGCTCGAGgtaggga
gggagggagggagggagggagagaggcagggggtaattgcaagccatgat
tctgacgaaatgcgatgcggtggtgcccctctcaccctcccatctgccct
tcctttcttccttccttccctcccttcatcccgccctctttcgctcagGC
CCTCTCCATCGCCCATACCATCACCACCCGCGGCCAGGAGCGGAGGGGTC
GAGACGAAGATCGCATCTCCTTCCTCGTCAAGATGCGCAACACGGCGCTC
GGCCCCCTCTTCTCCCCgtacgccctccctcccttcttctttctcccttg
cctccttctcttcttctttctcccttgcctccctccgtccttcgccccct
ccttcttttccaggcggcttggttcaaaaagctccgacatctcccctgtt
cactcgtgtcctccctcccttcctccctccttcctttcttccttcccccc
ctccttctagGGAGCACCAGCACCGGCTTCCCTACGACAAGATCGTCTTC
ATCAACGATGTTTATTTCTGTCCATGGCAGGTGCTCCGCCTCCTCTCCCT
CGTCACTGACGgtaggtccctcccaccctccctctctcttccttcctctt
tctctccgcttccctccttctagcttcttctctacttttcctcttctttc
aaggcaaagctgccggcgttccgatcttcttgctcccacggccaacgtcg
agcttcctctttttctttttttctccctcccttcctggcttcttccctcc
ctgcctctccaccctgacaagcctatgggtcgcacatcacacttcgcatc
ttcctctccctccctccctccctccctccctagGCGAGGTGCACGCGCAC
TGGGCGTGTGGAATGGACTTCAAGAAGCCCGCCTGGACGGACGGCATCTG
GCGGGCATTCAAgtgaggaaggaagggagggagggagggagggagggagg
gagggagggaagccaggtctccacctacaaggagaaatgctagttttgtt
ggctttgcttttggacgtttcctttcctccctccctccctccctcccttc
ctccctcctccaggggcctgtactttggtcctcgtgacccggtcaagacc
gtcctattgaccctccctccccccctccctccccccctccctcttccagG
GGCCTGTACACCGGCCCTCGCTTCTACGATATATGGGTGGCGCGAGACGT
GGAAGGAGAGCGCTTCCAGGAAGATCCTCCCTTCGTCCTTCACCCTCCTC
CTCTGTCGCCTGCAGGGAAGGAGGAGGGAAGGAGGGGGGGAGGGAGGGAG
GGAGGGCCGTTCCCAGTGTATTGCTGTTGGAACGGCATGGTGGCTATGGA
GGCGGAGCCTTTCTACCGgtgaggaagatgaggaggggagagaggacaag
agggaggcagggaggggggagctggagagattgaaagcgggccacatacg
tgagtgataacatccctctccctctctccctccctccctctctcctgtcc
tctcctcctcagCGGCCTCCGTTTCCGCGCCGCCCGCCCCTCCCTCCCCA
TCCAGTCGGAGTGCTCCCTCCTCTGCGACGACTTCTGGGCTAGCGGCCTC
GGCCACGTGCTGGTCGATCCTTCGGTCACCCTCGCTTACGACGCCCGCAC
CGACCTCGCCCTCCCCCCCGCCCTCCCCCCCGCCCTCTCCCCCGCTCTCT
CCCCCGCGGAATTTCCGGCGTCGCCCCCCGAGGCGGTGAGAGCGTGCTAC
CTTGAGCCCGGGCCCCGAAAGAAGAACAAGCGGGTCGACTACTCCACGTG
CAGgtagggggaagggagggagggaggaagggagggaggaggggctaggc
ggaaagttgacgggagtagcaagacccttcctttccctcttctttttcct
cttattcttcttccattttcttcttcttcttcttcttcttcttcttcttc
ttcttcgtcttcttcttcgtcttcattgccttctccttcttctccttctt
tccacccacactcacagCACTCGACCTCCCATGGCGCATGCCCTGTCGGC
CTCCAAACACCTCTGCCTCCCCCCTCCCCCTTCCTCCCTCCCGCCCTCCC
TCCTCGTCCTCATCCTTCCGCGATTGCCGCCCAGGAAGGATGAGGCTGCC
TATCTTCGCCACAAACTTCTGAGGTCGTCAAGCCATGAAGAGgtatatgt
gtccctctttgtcgtccttcttccttccttccttccctccatctgtcttc
tcccctctcgcttggctgtctagttagacgggcgtcgctcactctccgct
ccctcccttcatgcctcccttccagCCTGCCCTCCCTCCCTCCCTCCTCT
TCAACCTCCAGTCCTGGGAGGAGATGCACCCTGGCCCCGCCTTCTCACTT
GTCCTTCGGAGCGAGGCGGAAGCTGCTGCGGAGATCCTCGCTGCCAAAGA
GGGCGGGAGGGAGGGAGGGAGGGAAGGAGGGCATCTGCCATGGTTGCCTC
GGATGCAAGCGGCGGTGAAGAGgtgaggggaagggagagaggtggggagg
gagggaaagaaagggggatttagggactgggatagcgagacatgcacctt
tcatacctattttttcacccacttttttcttcccttgttccttccttctc
tgcctccatcccttcctcaccacgatcagCACCCCTCCCTCCCCCTTACG
TCGACTGAACCTCGGTTTGAGTCTTCTCCTCCTTCTCACAGAGGAGGGGG
GAGGGGAGGAGGGGAGGAAGGAAGGCAGGGGCGCGTTGGTGGATGGGAGG
CAGGAGGCCTTGCGGTCGATTGCGTGCACGGTTAGCGAGCTGGAGGGAGG
GGTGGAGGTAGGGGGAGAGGAAATGGTGGTATTGCAGGAAGGACGGGATG
TACAAAGCACGTTTGAGGAAGAAGAGGGAGGAGAGGAAGGAGGGAGGGGC
TCGATTTTGTTTCCGTCTTTGCAGGCATCTGCGACACGGGCTAAGATGGC
GAAGCACATCTTGGGGTGGTGCGAGGCGCAAGAAAAGAGGAATTAAGGGA
AGGCAGCAAGGCCGCCGAGGTCTTGAGAGAGGCACCATAAAATATGTAAC
ACATACAAGTTAAAATCATGTCGCTAAAGAACATTGATGCGAATGGATTT
TTAAAAATAAAAAATAAAAAAAGCAGGTCGACTGAAT
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protein sequence of NO20G00070.1

>NO20G00070.1-protein ID=NO20G00070.1-protein|Name=NO20G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=623bp
MSDGQSASGWVGRVMVQGGWWTPAAYIAECKPPQLPKHPSLPPSLPRVFF
ALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALD
ALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQ
HRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTD
GIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEG
RRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLL
CDDFWASGLGHVLVDPSVTLAYDARTDLALPPALPPALSPALSPAEFPAS
PPEAVRACYLEPGPRKKNKRVDYSTCSTRPPMAHALSASKHLCLPPPPSS
LPPSLLVLILPRLPPRKDEAAYLRHKLLRSSSHEEPALPPSLLFNLQSWE
EMHPGPAFSLVLRSEAEAAAEILAAKEGGREGGREGGHLPWLPRMQAAVK
STPPSPLRRLNLGLSLLLLLTEEGGGEEGRKEGRGALVDGRQEALRSIAC
TVSELEGGVEVGGEEMVVLQEGRDVQSTFEEEEGGEEGGRGSILFPSLQA
SATRAKMAKHILGWCEAQEKRN*
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protein sequence of NO20G00070.2

>NO20G00070.2-protein ID=NO20G00070.2-protein|Name=NO20G00070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=623bp
MSDGQSASGWVGRVMVQGGWWTPAAYIAECKPPQLPKHPSLPPSLPRVFF
ALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALD
ALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQ
HRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTD
GIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEG
RRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLL
CDDFWASGLGHVLVDPSVTLAYDARTDLALPPALPPALSPALSPAEFPAS
PPEAVRACYLEPGPRKKNKRVDYSTCSTRPPMAHALSASKHLCLPPPPSS
LPPSLLVLILPRLPPRKDEAAYLRHKLLRSSSHEEPALPPSLLFNLQSWE
EMHPGPAFSLVLRSEAEAAAEILAAKEGGREGGREGGHLPWLPRMQAAVK
STPPSPLRRLNLGLSLLLLLTEEGGGEEGRKEGRGALVDGRQEALRSIAC
TVSELEGGVEVGGEEMVVLQEGRDVQSTFEEEEGGEEGGRGSILFPSLQA
SATRAKMAKHILGWCEAQEKRN*
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protein sequence of NO20G00070.3

>NO20G00070.3-protein ID=NO20G00070.3-protein|Name=NO20G00070.3|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MSDGQSASGWVGRVMVQGGWWTPAAYIAECKPPQLPKHPSLPPSLPRVFF
ALNLKDNEALMPHLRAKLLETLAFFPNGSEGAYVSIYESNSKDRTPEALD
ALKVELEALSIAHTITTRGQERRGRDEDRISFLVKMRNTALGPLFSPEHQ
HRLPYDKIVFINDVYFCPWQVLRLLSLVTDGEVHAHWACGMDFKKPAWTD
GIWRAFKGLYTGPRFYDIWVARDVEGERFQEDPPFVLHPPPLSPAGKEEG
RRGGGREGGPFPVYCCWNGMVAMEAEPFYRGLRFRAARPSLPIQSECSLL
CDDFWASGLGHVLVDPSVTLAYDARTDLALPPALPPALSPALSPAEFPAS
PPEAVRACYLEPGPRKKNKRVDYSTCSTRPPMAHALSASKHLCLPPPPSS
LPPSLLVLILPRLPPRKDEAAYLRHKLLRSSSHEEVYVSLFVVLLPSFLP
SICLLPSRLAV*
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