NO20G00030, NO20G00030 (gene) Nannochloropsis oceanica

Overview
NameNO20G00030
Unique NameNO20G00030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length8553
Alignment locationchr20:4392..12944 +

Link to JBrowse

Properties
Property NameValue
DescriptionTld family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:4392..12944 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0007165signal transduction
Vocabulary: INTERPRO
TermDefinition
IPR037213Run_dom_sf
IPR008936Rho_GTPase_activation_prot
IPR006571TLDc_dom
IPR000198RhoGAP_dom
IPR004012Run
Homology
BLAST of NO20G00030 vs. NCBI_GenBank
Match: EWM22237.1 (tld family protein [Nannochloropsis gaditana])

HSP 1 Score: 856.3 bits (2211), Expect = 1.500e-244
Identity = 500/825 (60.61%), Postives = 558/825 (67.64%), Query Frame = 0
Query:  806 MEFLDALPEPLLGWHHYDAVIQAVTRSDLIEDQEARLRNLRLLLGEIPAVHKPLLCKLTAMCHRLLQEPRNGLTSRYLAECMAPGLVRSPYMPDSISARIELARLMQNEEEIIVTQALIEHRPLVLSDLDAEQEGYAQRLQLKWDRLLLLRHQLEEDPT-----RXXXXXXXXXXXXXXRKDALARAVASRLAGVEAALQRIRCVSASTDEWQITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAIGVRKDILEVLEAKTKEDVVRSEVLTLTPSTIEARLRVCGFPCGDLSDFRASGGGVLSVSCLLFFFQQHPQHAALLAFKYARRPGFCFTRVICRVVRMVMGVLHLGPSVREEHLLLHMCQAPWWDLLSEPMAVPSLVSLSLLLLDYLARHEALRPHEEDIFVLEAKRQLTWVLKQGPPSLDAAWHLWLSVRLEKLRAFARAEKARVYRKQFPQEFSALPSYPNTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPAHFNAAAPLPPSVS--------------LVTPRLLGLPLSSSSILSSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFFKKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGEVGAE--GEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGSSGACETFFSSPLHLPXXXXXXXXXXXXXXXXXXXXXXXXSLP------AVAKHTQFEILDLELWALEADYMEK----TSAAMARGRGVSDGKKGVAAEMESEVEKADRG 1600
            MEFLDALPEPLLGWH YDAV+QAVTR DLIED   RLRNLRLLLGEIP  HKPLLCK+T M  RLLQEP NGLTS+ LAE  A G+VR+PY+P ++S+R+E++RL+QN+EE+IVTQ L EHR  +  DLDAEQE ++++L+L WD LLLLR QLE DPT      XXXXXXXXXXXXXX              GVEAAL RIR VSASTD+WQ                                                      A+GVR+DIL+VLEAKT E VVRSE   LTP+TI +RL  CGFP GDLSDFRASGGGVL V+CL++FFQ HP+ AALL FKYARR GFCF RV+ RVVRMVMG     P VR+EHLLLH+ QA WW LL E  AVPSLV+LSLLLLDYLARHEALRPHEEDIFVLE KRQLTWVLKQGPPSL+AAWHLWLSVRLEKLRAFARAEKARVY KQFPQE SALPS+PN+                                 A    F A+    P  S                   LLG+P  SS+ILSSL  SQL++LE ALPPQH+DYAWRL+YSLAG+GASL TFFKKAK++EPTLLVLKDMQGGVFGGFATR W  KGESYYGDGESFVWSLVGE G +  GEAPLRKY WSTENSYFQLST+KDGLAMGGGGSFALFVDPELLNGSSG  ETFFSS LHLP                        SLP      A  +   FE+LDLELW+LEA+YM      T AA +   G + GKKG+A EME  +EK  RG
Sbjct:    1 MEFLDALPEPLLGWHLYDAVVQAVTRRDLIEDPGTRLRNLRLLLGEIPPSHKPLLCKITRMAQRLLQEPSNGLTSQVLAEAFAHGVVRTPYLPQALSSRLEISRLLQNKEEVIVTQILFEHRSDLFVDLDAEQERHSRKLELTWDNLLLLRRQLETDPTAEERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEAALNRIRFVSASTDDWQ----------------------QASASDLRRPARPAPGSPPSLAGSETSSTLSMAVGVRQDILDVLEAKTAEKVVRSEAEGLTPATIHSRLLFCGFPRGDLSDFRASGGGVLGVACLIYFFQHHPKEAALLTFKYARRSGFCFPRVVSRVVRMVMG----PPPVRDEHLLLHLSQASWWPLLCEHEAVPSLVALSLLLLDYLARHEALRPHEEDIFVLEVKRQLTWVLKQGPPSLEAAWHLWLSVRLEKLRAFARAEKARVYHKQFPQELSALPSFPNS---------------------APVPPTPPSEAVARLTSFAASPSSSPPASTDHXXXXXXXXXXXXXXXXLLGVPSGSSTILSSLPASQLLALEGALPPQHQDYAWRLVYSLAGNGASLTTFFKKAKDKEPTLLVLKDMQGGVFGGFATRAWSAKGESYYGDGESFVWSLVGEPGPKGLGEAPLRKYGWSTENSYFQLSTAKDGLAMGGGGSFALFVDPELLNGSSGPSETFFSSALHLP----PSTALPTPIPNLQPTQSVPFSLPTHSRPAATPEDACFEVLDLELWSLEAEYMASVTSLTRAATSMLEGTA-GKKGMAEEMEQAIEKHTRG 773          
BLAST of NO20G00030 vs. NCBI_GenBank
Match: EWM26371.1 (oxidation resistance protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 206.8 bits (525), Expect = 4.900e-49
Identity = 250/876 (28.54%), Postives = 360/876 (41.10%), Query Frame = 0
Query:  708 QVEQVWGESLERLCADSRLSPHALLAPDMALPTVFAEMIDSL-ATDEGAATSSLFDAEVSEPRSVLHILDLANRGFRLPAVPRNAEAATTHFRAVSVALMEFLDALPEPLLGWHHYDAVIQAVTRSDLIEDQEARLRNLRLLLGEIPAVHKPLLCKLTAMCHRLLQ---------------------EPRN-GLTSRYLAECMAPGLVRSPYMPDSISARIELARLMQNEEEII--------------------VTQALIEHRPLVLSDLDAEQEGYAQRLQLKWDRLLLLRHQLEEDPTRXXXXXXXXXXXXXXRKDALARAVASRLAGVEAALQRIRCVS----ASTDEWQITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAI--------------GVRKDILEVLEAKTKEDVVRSEVLTLTPSTI-----EARLRVCGFPCGDLSDFRASGGGVLSVSCLLFFFQQHPQHAALLAFKYA----RRPGFCFTRVICRVVRMVMGVLHLGPSVREEHL-LLHMCQAPWWDLLSEPMAVPSLVSLSLLLLDYLARHEALRPHEEDIFVLEAKRQLTWVLKQGPPSLDAAWHLWLSVRLEKLRAFARAEKARVYRKQFPQEFSALPSYPNTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPAHFNAAAPLPPSVSLVTPRLLGLPLSSSSILSSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFFKKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGEVGAEGEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGSSGACETFFSSPL 1513
            Q  +V+G  L  L  D      A L P + +P VF  MI  L A  EG  +  LF++ VS  R V ++  + +    +P          T    V+  L   L  LPEPLL +  Y A + A   SDL      R  ++  LL  +P  HKP L KL  +  +  Q                     +P+  GL+SR LA   A  ++RS Y+P    A  E  R +Q+ ++++                    +TQ LIEH          E+E   + LQ K +RL  +    ++                     +L R +   L  VE  +     VS    ++     ++                                                    AI              GV    + +L     E+    E        +       R   CGF  GD         G L++ C++ F ++ P  AA + F+Y+    R     F  +  +V R+V+ +L L P      L +    QAP+W LL  P AV  +   +L L+D+L  HEALR       +LEAKRQ++W L QGP S+ + W LWL++         RAE  R YR                +  XXXXXXXXXXXXXXXXXXXX             A F  A P    +     R +   +   S +  L P Q+I+LE +LP  HRD  W LLYSL   G +++T F++ K+   +LL + D  G VFGG AT  W ++ + Y+G GESF++S      A       KY W+  N+YF L++ + G+AMGGGG F L+++ +L  GSS  C+TF S  L
Sbjct:  648 QTRKVFGVPLAHLVRDVETCRFAFLEPSLGVPYVFETMIGYLEAYLEG--SPDLFESRVSGWR-VSNLSKVLDESQEIP--------PGTDPSIVAATLNLALRMLPEPLLTYESYHAFLSAARVSDL----ALRRASISQLLHGLPWEHKPTLRKLMHLLWKACQAAEHAGDGADERVGWDGASSRQPQQYGLSSRKLAPIFARSVLRS-YLPQFSRAEQEHIRQIQSGDQLVQPGANLALPFSLSHPPEAVALTQELIEHYTYYFHRAREEEEAKTRALQAKVERLAAMVETSKQPADAERDSECL----------SLFRTLFVFLGRVEERIHLASTVSPAPVSTRHRHSMSDAFRHRAGGSPPPASRKELDAQVRRVRSQSMPDVFDPTSSLHGEDEEGADMTAIQEAARKAEMLGLKAGVAGTSMSILPENEGEEGGSEEEQEAAGEDVPFSFDHPRWETCGFVRGD-PGCELVLSGRLTLQCIVRFVRRFPCIAAEMIFQYSHHGRRGITISFPALCVQVTRLVLELLQLLPKTEGGPLSITTFAQAPYWRLLDSPRAVEEVFCFALTLVDFLHFHEALRMDAVKPHILEAKRQVSWALAQGPASVHSLWELWLAL---------RAELRRQYR----------------DAHXXXXXXXXXXXXXXXXXXXXRKADEEVQLADDQACFLQADPTNDQIIYKVSRGIRSRMWGKSAI--LAPWQVITLERSLPEHHRDRDWFLLYSLKKHGTAMHTIFERCKDHPYSLLCVVDNDGVVFGGMATEEWRDQKDRYFGSGESFLFSFKSNKFA-------KYTWTRNNTYFMLASQRIGMAMGGGGHFGLYLNSDLTRGSSDKCDTFGSVTL 1462          
BLAST of NO20G00030 vs. NCBI_GenBank
Match: OQR85392.1 (hypothetical protein ACHHYP_11880 [Achlya hypogyna])

HSP 1 Score: 157.5 bits (397), Expect = 3.400e-34
Identity = 195/791 (24.65%), Postives = 314/791 (39.70%), Query Frame = 0
Query:  730 ALLAPDMALPTVFAEMIDSLATDEGAATSSLFDAEVSEPRSVLHILDLANRGFRLPAVPRNAEAATTHFRAVSVALMEFLDALPEPLLGWHHYDAVIQAVTRSDLIEDQEARLRNLRLLLGEIPAVHKPLLCKLTAMCHRLLQEPR---NGLTSRYLAECMAPGLVRSPYMPDSISARIELARLMQNEEEIIVTQALIEHRPLVLSDLDAEQEGYAQRLQLKWDRLLLLRHQLEEDPTRXXXXXXXXXXXXXXRKDALARAVASRLAGVEAALQRIRCVSASTDEWQITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAIGVRKDILEVLEAKTKEDVVRSEVLTLTPSTIEARLRVCGFPCGDLSDFRASGGGVLSVSCLLFFFQQHPQHAALLAFKYARRPGFCFTRVI--CRVVRMVMGVLHLGPSVRE---EHLLLHMCQAPWWDLLSEPMAVPSLVSLSLLLLDYLARHEALRPHEEDIFVLEAKRQLTWVLKQGPPSLDAAWHLWLSVRLEKLRAFARAEKARVYRKQFPQEFSALPSYPNTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPAHFNAAAPLPPSVSLVTPRLLGLPLSSSSILSSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFFKKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGEVGAEGEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGSSGACETFFSSPL 1513
            A + P +A+P    + +  +A    A T  LF   VS+   +  + D       LP  P            V+  L+EFL  +PEPL+    YDA +     S  + ++  R+RNL  L+ ++P   K +L ++  +   L+Q P    NGL +  L+  +AP +VR     ++   +++   +        V + L+EH   + + + A      Q  + K  R L     L +D                 R D  A       A +   ++R R  + + DE +                                                       +    D +E+  ++  EDV              A  +  GF    + D  AS GGVL + C   + +  P     LA    R P  C+  V     +V +++  L L P+  +   +  LL M   P+W++L++      L  L+L + +    H+    H+    + E   QL W+L + PPS+D     W   R   + +   +    +     PQ  +     P+                                       FN AA        +  +LLG     S IL+      ++ L+ ALP   +   W+LLYS    G+SL +    AK + PTL+V++D Q  VFGGFAT  W  +  +YYG GE+F+++       E  A ++KY WS +N+YFQL  S+D L MGGGG+F L++D +L+ GS+GAC+TF S PL
Sbjct:  297 AFIDPHLAIPNFVVDCLAYIAAH--ADTPRLFRTTVSQV-YLAPVKDYIEFHGGLPKQPDP--------HVVTAVLLEFLRHIPEPLITSERYDAFV----ASSRMPEEADRVRNLACLVADLPVECKVVLERVFGVLATLVQPPHAALNGLNAVGLSIALAPAIVRKRETREN-KLQMQAQEVRMAAIGAHVVELLLEHHESIFAGVRAAIAKARQDFEAK-QRFLASFAALAKD------------APVVGRADDDA-----AFATIWTHMRRFRSQALTLDETEALATSARRQNGRQRRELPVSDNNQED----------------------------EVAALLDDVELATSEATEDV--------------ATWQSFGFQANAVVDNFAS-GGVLLLRCFAHYVEHTPTAMEFLATCQGRAPPRCYNAVTAGAALVAVLLNALKLVPTPAQPTIDFTLLSM--EPFWEILADDRFFVRLFGLALDMFE----HQWAFTHDFGRVLEETIAQLEWLLHRSPPSVDDIVDDWKLYRKTAISSRQNSINNMLAAIVTPQAATTSDKAPD---------------------------------------FNEAA--------MAQKLLG----RSQILNI---GHIVELDEALPITCQLCKWKLLYSTDVHGSSLQSLMILAKAQSPTLVVVQDDQQVVFGGFATDEW-HQALNYYGTGEAFLFTF------ENGATVKKYPWSRQNTYFQL-CSEDALIMGGGGNFGLYLDADLVQGSTGACDTFASKPL 942          
BLAST of NO20G00030 vs. NCBI_GenBank
Match: XP_008618239.1 (hypothetical protein SDRG_13916 [Saprolegnia diclina VS20] >EQC28369.1 hypothetical protein SDRG_13916 [Saprolegnia diclina VS20])

HSP 1 Score: 150.2 bits (378), Expect = 5.400e-32
Identity = 190/795 (23.90%), Postives = 317/795 (39.87%), Query Frame = 0
Query:  730 ALLAPDMALPTVFAEMIDSLATDEGAATSSLFDAEVSEPRSVLHILDLANRGFRLPAVPRNAEAATTHFRAVSVALMEFLDALPEPLLGWHHYDAVIQAVTRSDLIEDQEARLRNLRLLLGEIPAVHKPLLCKLTAMCHRLLQEPR---NGLTSRYLAECMAPGLVRSPYMPDSISARIELARLMQNEEEIIVTQALIEHRPLVLSDLDAEQEGYAQRLQLKWDRLLLLRHQLEEDPTRXXXXXXXXXXXXXXRKDALARAVASRLAGVEAALQRIRCVSASTDEWQITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAIGVRKDILEVLEAKTKEDVVRSEVLTLTPSTIE--ARLRVCGFPCGDLSDFRASGGGVLSVSCLLFFFQQHPQHAALLAFKYARRPGFCFTRVI--CRVVRMVMGVLHLGPSVRE---EHLLLHMCQAPWWDLLSEPMAVPSLVSLSLLLLD--YLARHEALRPHEEDIFVLEAKRQLTWVLKQGPPSLDAAWHLWLSVRLEKLRAFARAEKARVYRKQFPQEFSALPSYPNTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPAHFNAAAPLPPSVSLVTPRLLGLPLSSSSILSSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFFKKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGEVGAEGEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGSSGACETFFSSPL 1513
            A + P +A+P    E ++ +A+   A+T  LF   VS+   V  + D       LP  P            VS  L+EFL  +PEPL+    YDA + A      + D+  R+RNL  L+ ++P   K +L ++  +   LL+      NGL    L+  +AP +VR     ++   +++   +        V + ++ H   + + + +  +   Q  ++K   L      +++ P                  DA    +   +    + +Q +    A  +  +                                                           +D  +  E    + +V  EV  LT +  +  A  +  GF    + D     GGVL + CL ++ Q  P+    LA    R P   ++ +     +V +++  L L P+      +  LL M   P+W++L++ +    +  L+L + +  Y   H+  R  EE I       QL W+L + P S+D     W                 ++YRK      +A+ S  N+                                 A  A   AA  +  ++      +    L  S IL+    + ++ ++  LP   +   W+LLYS    G+SL +    AK + PTL+V++D Q  +FGGFA+  W     +YYG+GESF++S       E  A + KY WS +N+YFQL  S+D L MGGGGSF L++D +LL GS+GAC+TF S PL
Sbjct:  280 AFIDPHLAIPNFVVECLEYIASH--ASTPRLFRTTVSQV-YVAPVKDYIEFHGCLPKQPDP--------HVVSAILVEFLRHIPEPLITSERYDAFVTA----SRMPDEGDRVRNLACLVADLPIECKIVLERVFGVLATLLEPAHAALNGLNVVGLSIALAPAIVRKRETREN-KLQMQSQEVRMAAIGAHVVELMLSHHETIFASVRSTIQKATQDFEIKQRFLASFAPLVKQHPV-----------VGNVDDDAALETIWHCMKRHRSQVQTMEETEAQANTSRRQSAVVRNEMQQHLRD-------------------------------------------EDNNQANEDDENDGMVFEEVPLLTSAATDDVALWQAYGFHAARVLD-NFQSGGVLLLRCLAYYVQHDPKALEHLAACARRTPPRAYSALTASAAIVAVLLNALKLAPTPSHPTIDFTLLSM--EPFWEILADHVFFYRMFGLALEMFEYQYTFTHDFGRVLEETI------AQLEWLLHRSPSSIDDIIDDW-----------------KLYRK------TAISSRQNS----------------------------ISNMLAAIATPEAAVTMSKALDFNRAAMAQKLLGDSKILNI---AHIVEIDEVLPITCQLCKWKLLYSTDVHGSSLQSLLILAKAQSPTLVVVQDDQNVIFGGFASDEW-HHALNYYGNGESFLFSF------ENGASVTKYPWSRKNNYFQL-CSEDALIMGGGGSFGLYLDGDLLQGSTGACDTFASKPL 933          
BLAST of NO20G00030 vs. NCBI_GenBank
Match: XP_012197312.1 (hypothetical protein SPRG_03345 [Saprolegnia parasitica CBS 223.65] >KDO32128.1 hypothetical protein SPRG_03345 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 142.1 bits (357), Expect = 1.500e-29
Identity = 181/791 (22.88%), Postives = 310/791 (39.19%), Query Frame = 0
Query:  730 ALLAPDMALPTVFAEMIDSLATDEGAATSSLFDAEVSEPRSVLHILDLANRGFRLPAVPRNAEAATTHFRAVSVALMEFLDALPEPLLGWHHYDAVIQAVTRSDLIEDQEARLRNLRLLLGEIPAVHKPLLCKLTAMCHRLLQEPR---NGLTSRYLAECMAPGLVRSPYMPDSISARIELARLMQNEEEIIVTQALIEHRPLVLSDLDAEQEGYAQRLQLKWDRLLLLRHQLEEDPTRXXXXXXXXXXXXXXRKDALARAVASRLAGVEAALQRIRCVSASTDEWQITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAIGVRKDILEVLEAKTKEDVVRSEVLTLTPSTIEARLRVCGFPCGDLSDFRASGGGVLSVSCLLFFFQQHPQHAALLAFKYARRPGFCFTRVI--CRVVRMVMGVLHLGPSVREEHL-LLHMCQAPWWDLLSEPMAVPSLVSLSLLLLDY--LARHEALRPHEEDIFVLEAKRQLTWVLKQGPPSLDAAWHLWLSVRLEKLRAFARAEKARVYRKQFPQEFSALPSYPNTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPAHFNAAAPLPPSVSLVTPRLLGLPLSSSSILSSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFFKKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGEVGAEGEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGSSGACETFFSSPL 1513
            A + P +A+P    E +D +A+   A+T  LF   VS+   +  + D       LP  P            VS  L+EFL  +PEPL+    YDA +     S  + D+  R+RNL  L+ ++P   K +L ++  +   LL+      NGL    L+  +AP +VR     ++   +++   +        V + ++ H   + + + +  +   Q  + K   L      +++ P                  DA   A+ + +    + +Q +    A  +  +                                                        G+  + + +  +   +DV   +   L    +             L +F++  GGVL + CL ++ Q  P+     A    R P   +  +     +V +++  L L P+     +    +   P+W++L++      +  L L + +Y     H+  R  EE I       QL W+L + P S+D     W                 ++YRK      +A+ S  N+                                 A  A   AAA    ++      +    +  S IL+    + ++ ++  LP   +   W+LLYS    GASL +    AK + PTL+V++D Q  +FGGFA+  W     +YYG+GESF+++       E  A + K+ WS +N+YFQL  S+D L MGGGGSF L++D +LL GS+GAC+TF S PL
Sbjct:  280 AFIDPHLAIPNFVLECLDYIASH--ASTPRLFRTTVSQV-YLAPVKDYIEFHGCLPKQPDP--------HVVSAILVEFLRHIPEPLITSERYDAFVS----SSRMPDESDRVRNLACLVADLPIECKIVLERVFGVLATLLEPAHAALNGLNVVGLSIALAPAIVRKRETREN-KLQMQSQEVRMAAIGAHVVELMLSHHETIFASVRSTIDKATQEFEAKQRFLSSFAPLVKQHPV-----------VGNVDDDAALEAIWNCMKRHRSQVQTMEETEAQANATRRQSAILRSEGQQHARDEDNNQANDEND-----------------------------GMVFEEIPLPSSAATDDVALWQAYGLHAERV-------------LDNFQS--GGVLLLRCLAYYVQHDPKALEYFASCERRTPPRSYNALTASAAIVAVLLNALKLAPTPSHPSIDFTFLSMEPFWEILADHAFFYRMFGLGLEMFEYQWTFTHDFGRVLEETI------AQLEWLLHRSPSSIDDIIDDW-----------------KLYRK------TAISSRQNS----------------------------ITNMLAAIATPEAAATTTKALDFNEAAMAQKLIGDSKILNI---AHIVEIDEVLPITCQLCKWKLLYSTDVHGASLQSLLILAKAQSPTLVVVQDDQNVIFGGFASDEW-HHALNYYGNGESFLFTF------ENGASVTKHPWSRKNNYFQL-CSEDALIMGGGGSFGLYLDADLLQGSTGACDTFASKPL 931          
BLAST of NO20G00030 vs. NCBI_GenBank
Match: GBG24798.1 (RUN and FYVE domain-containing protein 1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 141.0 bits (354), Expect = 3.300e-29
Identity = 130/420 (30.95%), Postives = 192/420 (45.71%), Query Frame = 0
Query: 1116 DFRASGGGVLSVSCLLFFFQQHPQHAALLAFKYARRPGFCFTRVICRVVRMVMGVLHLGPSVREEHLLLHMCQAPWWDLLSEPMAVPSLVSLSLLLLDYLARHEALRPHEEDIFVLEAKRQLTWVLKQGPPSLDAAWHLWLSVRLEKLRAFARAEKARV--------------------------YRKQFPQEFSALPSYPNTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPAHFNAAAPLPPSVSLVTPRLLGLPLSSSSILSSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFFKKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGEVGAEGEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGSSGACETFFS 1510
            DFR  GGG  ++  + +F + H   A L+  K  + P   F R   +V R+   VL L     ++H  L   + PWW LLSE  AVP +  +SLLLLD           +      E +  ++ +L  GP S++  WH W+ +R E++  +A++++                                  P    A  S  +                   XXXXXXXXXXXXXXX                 +   +LL + L S+    +LT + +  LEAALP  ++ Y W+ ++S  G    +  F+  A+  E TLLV++D  G +FGGF  R W     SYYG  E+F+++L        E     Y  +  N+YF L+ ++D LA+GGGG F LF+D + L G+SG CETF S
Sbjct:  649 DFR--GGGKFALEMVTYFVRAHRAKARLI-IKSQKYP---FIRAASQVARLCSDVLQLS---AQDHTTLP--ETPWWGLLSESDAVPRVFCMSLLLLDINFCESGASITDFGRVAQETRIHMSDLLSLGPTSVNKLWHSWIQLRAERM-LWAKSQQGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTPLNGEAHSSATSDGPRVTQEENQVSEKTHMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYAGVDLDQLLPVVLGST---ETLTKTHIAKLEAALPSVYQGYDWKAVFSSNGSDHDIGDFYNNAEGHEATLLVVRDKGGAIFGGFCPRPWALDNASYYGSPETFLFTL--------EPSFAVYRATQRNAYFMLA-NEDSLALGGGGEFGLFLDEDFLGGTSGPCETFDS 1044          
BLAST of NO20G00030 vs. NCBI_GenBank
Match: OQS02280.1 (hypothetical protein THRCLA_05335 [Thraustotheca clavata])

HSP 1 Score: 136.3 bits (342), Expect = 8.100e-28
Identity = 186/803 (23.16%), Postives = 316/803 (39.35%), Query Frame = 0
Query:  729 HALLAPDMALPTVFAEMIDSLATDEGAATSSLFDAEVSEPRSVLHILDLANRGFRLPAVPRNAEAATTHFRAVSVALMEFLDALPEPLLGWHHYDAVIQAVTRSDLIEDQEARLRNLRLLLGEIPAVHKPLLCKLTAMCHRLLQEPR---NGLTSRYLAECMAPGLVRSPYMPDSISARIELARLMQNEEEII------VTQALIEHRPLVLSD----LDAEQEGYAQRLQLKWDRLLLLRHQLEEDPTRXXXXXXXXXXXXXXRKDALARAVASRL-AGVEAALQRIRCVSASTDEWQITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAIGVRKDILEVLEAKTKEDVVRSEVLTLTPSTIEARLRVCGFPCGDLSDFRASGGGVLSVSCLLFFFQQHPQHAALLAFKYARRPGFCFTRVI--CRVVRMVMGVLHLGPSVRE---EHLLLHMCQAPWWDLLSEPMAVPSLVSLSLLLLDYLARHEALRPHEEDIFVLEAKRQLTWVLKQGPPSLDAAWHLWLSVRLEKLRAFARAEKARVYRKQFPQEFSALPSYPNTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPAHFNAAAPLPPSVSLVTPRLLGLPLSSSSILSSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFFKKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGEVGAEGEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGSSGACETFFSSPL 1513
            +AL+ P +A+P    E +D +A    A T  LF   VS+    +++  + +       +P+  +        +S  L+EFL  +PEPL+    YDA I +    + ++    R+RNL  L+ ++P   K +L K+      LL+      NGL    L+  +AP +VR     ++        + MQ++E  +      V + L+EH+  + +     +    E +A + +      LL +    E PT                 DA    + S + A     L      S ST+  ++                                                     A G+  + + +  +   +D    +    T +T+                     GG L +  L ++ Q  P+    L   +AR P   +  V     +V +V+  L L P+      +  LL M   P+W++  +      + +LSL + +    H+    H+    + E   QL W+L + P ++D     W+                 +YRK      +A+ S  N+                                      FN AA        +  +L+G    +S IL+      ++ L+  LP   +   W+LLYS    G+SL +    AK + PTL+V++D +  +FGGFAT  W     +YYG GE+F+++       E  + ++KY WS +N+YFQL  S+D L MGGGGSF +++D +L+ GS+GAC+TF S PL
Sbjct: 1235 YALINPYLAIPNFIVECLDYIAAH--ANTPRLFRTTVSQ----VYLAPVKDYIEFHGCLPKQTDP-----HVISAILVEFLRHIPEPLITSERYDAFIASSRMPEAVD----RIRNLECLVADLPVECKVVLEKVFGTLAILLEPEHAAVNGLNVVGLSIALAPAIVRKRETKEN-------KQQMQSQEVRMAAIGAQVVELLLEHQSKIFASVRTMIAKAHEDFAAKQKFLGSFALLTK----EIPT-----------VGKPEHDAAFNGIWSNMKAHRSQQLTMEETESISTNTRRLHAERRQKAQEEFKDDDNQD----------------------------------AEGMVFEEVPLPHSTATDDFALWQSFGFTAATVPENF---------------ISGGTLLLRSLAYYIQHEPKAMEFLETCHARTPPMYYNIVTASAALVAVVLNALKLSPTPSHPVIDFTLLSM--EPFWEIFDDANFFYRMFALSLNMFE----HQWTFTHDFGRVLEETIAQLEWLLHRSPSTIDDIIDDWM-----------------LYRK------TAVSSRHNS---------------INNMLAAIVTPEAGATTTDKSMDFNEAA--------MAQKLIG----TSKILNI---GHIVELDEVLPITCQLCKWKLLYSTDIHGSSLQSLLILAKAQSPTLIVVQDEKNVIFGGFATDEW-HPALNYYGTGEAFLFTF------EQGSTVKKYPWSRKNNYFQL-VSEDALIMGGGGSFGIYLDADLMGGSTGACDTFSSKPL 1884          
BLAST of NO20G00030 vs. NCBI_GenBank
Match: XP_024571500.1 (hypothetical protein, variant 1 [Plasmopara halstedii] >CEG35131.1 hypothetical protein, variant 1 [Plasmopara halstedii])

HSP 1 Score: 131.3 bits (329), Expect = 2.600e-26
Identity = 75/160 (46.88%), Postives = 98/160 (61.25%), Query Frame = 0
Query: 1353 LSSSSILSSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFFKKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGEVGAEGEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGSSGACETFFSSPL 1513
            + SSSI   LT   +  ++ ALP   +   W  +YS+  +G+SL T    AK + PTLLV+KD +G VFGGFA+  W  +  +YYG GESF++S      A G     KY WS +NSYF L  S + L MGGGG+F LF+D +L  G+SGACETF S PL
Sbjct:  872 IDSSSI---LTADHIACIDHALPITTQLCRWYKIYSVEANGSSLETLLTLAKKQSPTLLVVKDAKGNVFGGFASDEW-HRAFNYYGTGESFLFSFANTSAAGG---FVKYQWSRKNSYFML-CSDESLIMGGGGNFGLFLDSDLSRGTSGACETFNSPPL 1023          
BLAST of NO20G00030 vs. NCBI_GenBank
Match: EWM22238.1 (rap2 interacting protein x isoform 3, partial [Nannochloropsis gaditana])

HSP 1 Score: 128.6 bits (322), Expect = 1.700e-25
Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 0
Query:  457 VGRARAWLRLCLNMGCLESSLRALIAQHNHLLQVFYRPSASLLLCPEGSNILLALVATLESFQFSLSLLPALDQEVVYPFIDW 540
            +GRARAWLRL LN  CLE+SLRAL+ QH HLLQVFY PS SLLLCPEGS ILLALV+TLE+F FSL L P LD+EV YPFIDW
Sbjct:   63 IGRARAWLRLSLNAQCLETSLRALMTQHKHLLQVFYDPSLSLLLCPEGSLILLALVSTLETFSFSLHLKPGLDREVAYPFIDW 145          
BLAST of NO20G00030 vs. NCBI_GenBank
Match: XP_009529546.1 (hypothetical protein PHYSODRAFT_315971 [Phytophthora sojae] >EGZ15797.1 hypothetical protein PHYSODRAFT_315971 [Phytophthora sojae])

HSP 1 Score: 126.7 bits (317), Expect = 6.400e-25
Identity = 70/153 (45.75%), Postives = 93/153 (60.78%), Query Frame = 0
Query: 1360 SSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFFKKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGEVGAEGEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGSSGACETFFSSPL 1513
            S LT   +  ++ ALP   +   W  +YS+  DG+SL T    A+ + PTLLV+KD +G VFGG+A+  W  +   YYG GESF++S      A G     KY WS +NSYF L  S + L MGGGG+F LF+D +L  G+SGACET+ S PL
Sbjct:  896 SILTLEHIAYIDHALPITSQLCRWFRIYSIEADGSSLETLLILAQKQSPTLLVVKDAEGNVFGGYASDEW-HRAFHYYGTGESFLFSFANSSTAGG---FVKYQWSRKNSYFML-CSDESLIMGGGGNFGLFLDSDLSRGTSGACETYNSPPL 1043          
The following BLAST results are available for this feature:
BLAST of NO20G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22237.11.500e-24460.61tld family protein [Nannochloropsis gaditana][more]
EWM26371.14.900e-4928.54oxidation resistance protein 1 [Nannochloropsis ga... [more]
OQR85392.13.400e-3424.65hypothetical protein ACHHYP_11880 [Achlya hypogyna... [more]
XP_008618239.15.400e-3223.90hypothetical protein SDRG_13916 [Saprolegnia dicli... [more]
XP_012197312.11.500e-2922.88hypothetical protein SPRG_03345 [Saprolegnia paras... [more]
GBG24798.13.300e-2930.95RUN and FYVE domain-containing protein 1 [Aurantio... [more]
OQS02280.18.100e-2823.16hypothetical protein THRCLA_05335 [Thraustotheca c... [more]
XP_024571500.12.600e-2646.88hypothetical protein, variant 1 [Plasmopara halste... [more]
EWM22238.11.700e-2577.11rap2 interacting protein x isoform 3, partial [Nan... [more]
XP_009529546.16.400e-2545.75hypothetical protein PHYSODRAFT_315971 [Phytophtho... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002522NSK002522Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00030.1NO20G00030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|86488gene_6210Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100597g1gene8202Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00030.1NO20G00030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00030 ID=NO20G00030|Name=NO20G00030|organism=Nannochloropsis oceanica|type=gene|length=8553bp
CTTGCATTTGGTGGAGACCACCTGATGATGAATGTAGATAGAGTCAGGGC
GCATCAAGGCATGTTTCCCTGTCCCTGCATGCTGTAGGGGACTTGTCCAT
CGCAAGGCAATGGAGGGGGAGCGGGGGGGGGCTCACAAGATTAATCGCCT
TTTCTTGGGTCACCTCATGAGGATCTGTCCTACTTTGCCGTGCGGAGACC
AGCAATACACCCGTCCGCCTGCATGTTGGACCACCTACAGATGAATAATG
CGTCCCTCATTTCCTCCTCTACCTGAGATTAGCATGATGATCGTCTGCTG
GCATTTCTGGCCATCTCTATCTACTACAAATGCATCCCTCCTTTCCTTTC
CTCCTCCAGCTCGACAGGCAGCGCTCGGAGCGCACCTGGTACATAACCCG
CACACAAGCCTCGTCCACTTGCCTCCCCATCTCATCCGTCCCTTTCAACA
CTTTCGCGACTAGAAAATAAATTACCTGCAAACACCGCCATCACCATTGC
GCCACCCACACAATGTCGTGGCTTTTTGGTAGCTGGCTAGGTGGCGGGTC
AAGCGCCGGAGGAGAAGGGGGCAGCAAGGACAGGCAACGATCGGGGAAGG
AAAGCAGCAAAATCGACATCCATTTATCAGGCTGCGCCTCCTCCCTCCCC
GCGTCCTCTTTTCATTCCTTGCGTCCACAGCCGACGCCCCATGTCAAGGC
CGGCAACTATGACCTTCGCATCCCTCCCTCCCCTGCCGACGGCCTCCTAA
CGGGCGGCACCCCGCAGCAACACGCCCTCGTGGAGTTCAAGCGCGTGATT
CAGgtatgtagggtgcgtgtacagacaacagtcctattttcctctgcttc
cttggtctaggctactagtctagtgtctgccatctcatcccgacgaaacc
ctttttttgtcgcatccagGTGCTTCTGAGAGAGCGCTGCTACCCGCCCT
TCTCGCCCGGAGGCACCCTCTCCATCTCATCCTCTACGGCCTCAAATGCT
CACGATGACGAGGAGGGGTGTGTCTCCGCGTCCACCCTGCAAGATGTTTC
GGACGTGCCTCCTGCTCCTATGGGAGATACAAAGAAGAGGGGAAACCCAA
GCCTTGAAAGCATCCCGCCCTCTAAACCGTCCTCGACCTCGTCGTCACCT
TTGCCTTCCTCTTCTATCATCGCCAGAGCTACAGCGAACGAAGAAGCGAC
ACAAGCCGAAGGGAAAGCCTCCCTCCCCTTCCTAACAGCTTCTGCAGATG
AATCAACACTTGCTTCCCCTCCTCCCCCTCCTCCTCTTCCTCCTCTTACG
GCTGGAGACACGGGGGAGAGCAGTGAGCTGCTACTGGCGCCTTTCTCTTC
TCATGCTTCTACCACAGCTGCTGTTCCTGATGCTGCTGTTTCTTCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTACGGCAACGAAGGCTCCTACT
GGTCCCGATTCCTCCGCAGCACTTAAGGTTCCCCGTCCCTCTTCCCTGTT
CCCGTCATCGGCTTCCTCCTCTTCTTCGTCCTCTTCGTCCTCCTCTGCTG
CTGCCGCGCCTCCTCGCTCGCTTCCACCGCCTCGGCAAAGAAGCCGCGTG
GTGCAAGCCAGGAGAGAGAGGACGAACGATGAGGCCGGGGAAGAGGCAGC
AGCCAGGCGGAAAGCTCGACAGGTGATCGAGGGGGCGGGAGAGGGAGAGG
ATCCAGCGGTGGCAGCCGTGCTGCGGGCTCTGGAGCAGTGCGTGTTTTTG
GGCATGCGGCGCCAGGAGTTTCACGgtgatgagatgagggggaggaagtg
tgtgggagggagggaaggagggagggagtatgcggtctttagcgggggat
tctcatttcatattcttcctgcacattgcgtatgacagGCGTGCTGCCGT
TTTGGAGGATGGTCTGGACTGCGGCGACCGGCTGCCTCCAACTCCCGCAT
GGGCACCACCCGACGgtgggtatgagagaggggggggaaagtggctggac
ggagggaggctctgggctgtctcacaactgtctcacgcgctcacttgatg
catgtatatgctcatcgcgcccctccctggtctattttgttctgtccctt
tctgcagCAACAGCACGGCCACGATCGGCGGGGCTTTCTCCAGGACCCCC
CGGGCCAAAACCACCCCTTGGCGGAGGAGgtgcgatagaagggagggctg
gaggagagcatggaagagaagcaagtcgtatacgtcgcaatacccatgtc
gttcccctccctatccattctttccctcgggcagGTGCCACCCGAGCTGC
AGGGCCTGCGCGCGGCGTATGAGACAGTCTTGGCCTCGGGCGCCGTCAAC
AACGTTGTCGgtgcgtgccctctctcccttcctccttccctccctccctc
ccctccttatttcctcctcgcttacccgtatcttcacgtcttgctccctc
tacctcgctccccttccgccacctatagGTCGGGCCCGCGCCTGGCTACG
GCTGTGCCTCAACATGGGATGCCTGGAGAGCAGCCTGCGCGCCCTCATAG
CGCAGCACAACCACCTGCTGCAGgcaagctagcaacgagggaggggagga
gggagggaaggggggggggggcatggtcatagctcgtgcagccggtgagg
cgaggattgtcaagtcccgcacttcccgatcgtttgtcaagtgattgtcc
actgactagaaaccttcgttcctcccttctcacctcccctttcccagGTG
TTCTACCGCCCCTCGGCCTCCCTCCTTCTCTGCCCGGAAGGCTCCAACAT
CTTGCTGGCGCTGGTGGCGACGTTGGAGTCGTTCCAATTCAGCCTCTCCC
TGCTTCCCGCCCTCGACCAGGAGGTGGTTTACCCCTTCATAGACTGGGAC
GCTGACGAGGAGGAGGAGGAAGAGGGTAGGAAGAAGAGAAGGGGAGGCAG
GCAGGAGAAGAAGAAGAAGAAGGAGAACAAGAAGGGCAAGTTGCCCCCAC
CTCTGAGGGAGAGGGAGGGAAAGGAGCTGAGGTCGCCGCACTCCGTGCCG
CCTTCGCCGCAGACCCTGATCCGAGGGTTGGACGCGACGAAGCTGGAGGA
CGAGGAGGAGATGAAGAGGATGCGACAGGCCCTGCTGCACAACCCCAAgt
aggtagcgggaggcgcgtgtgaaggggaacgaggaaggaacgaagatcga
aggggcccctaaatccagaagtcgtgttttacaaggcacagactcacgcc
ccgcctcgaggcagacggcatagtatttagggagacagactacatatgca
ctcgagaggttgtttactggctgggcagcgtgattactagcgcttgcagt
cgtgtagttgctctctcctagttggtcgttggacgagaagagggagggag
ggagggagggagggagggaaaaagacatagaaatgctcgctcacttcatt
atactcacccttgtggttcttgtccttgttgtgcaaatgcacttgactgc
gtgcgcatccacagGTTGTCCTTCAATGAGCATGACCGGTCGGGGCACGG
GGAGGAAGGGCTAGGCAAGCTGCTGCTGCACCAGgtacagaaagacacag
gcgttcgagtggagaggaagcaagtcataggacacacgcgtgctcctaat
gtccccttttccctcccctctttcttccttccctcctttctttcctatct
ggaaaaattatcccctgaggccccctttcgccttctttctctctctctct
cttttcgtcccttccacttcaagacgtactgatatacctcccctcccacc
gtccccactccttcccttcctttttcccttcgattgattggtagGTGGGG
CACGGGCTGGACCGGCTGCTATTGGCCTCCAAGGGCCTAGTCTTGGACGC
CGTGGGGGAAGGCCGGGTGGAGGGGGAGGAAGCAGgtgagcggaaggggg
ggaagaaggggagcgaggaggagagagggatggttagtccgagtccctgg
atgtgctcacttgcatcgatgcgtttctgctagACCGCACTCGCACAGGC
TCGCCGCACCGGCCGATGAGGAGCCCGCAACTGCTGCATCCGCCTCACGT
AGCGGGTGGTGGGAATGGCGGGCAGCAGGTGGAGCAGGTGTGGGGGGAGA
GCTTAGgtaaagtggaagcgagaagaggagggagggaagagaaggacgaa
aacggtcagtcctcgcaaccacgacttctcatttgcggctgctgcacaaa
cggtaatttcctcctaaacaaacagAGCGGCTGTGCGCGGACTCGCGTCT
ATCGCCCCACGCCTTGCTGGCGCCGGACATGGCTCTGCCCACCGTCTTTG
CCGAGATGATAGACAGCCTAGCCACGGACGAGGGGGCTGCCACCAGgtac
gtgacggagaggaagagagggagggagggagggagggagcggggatgctc
gcatgtctagacgtagatgcctcgctgggtgtttccctccctctctacga
ccttgttttcacctctctctccgggtaccatccaccttccctcctatcgc
cagCTCTCTCTTCGATGCGGAGGTGTCTGAGCCTCGGAGCGTGCTGCATA
TCCTTGACCTGGCCAACCGGGGCTTCCGACTGCCCGCCGTGCCCCGGAAT
GCAGAGgtaagaggaaaagggggaaggagggaagggggagaaggaagagg
gacagggctgtatccgaaatagccgagacatggaaagagaacaagatggg
aagtaataggatgaagcaggcagcaggcatatctatttactttatcaaat
atttgtttgaagcgacaaggtcacctgacgtctctctcctccctccaccc
tcctttcttcccccttgtctcacccccatagGCTGCCACCACGCACTTCC
GGGCCGTGTCGGTGGCGCTGATGGAGTTCTTGGACGCCCTGCCCGAGCCC
CTCCTCGGCTGGCACCACTACGACGCCGTCATCCAGGCCGTTACCCGCAG
gttgaacagacatggatactacccacccatcggacccttcatctcttttt
ccctcgctccctcccttccgcccttgtcttcacctcgcactcatcgggtg
ttcccctattttatcctccctttccttctcttccccgaaacaaagCGATC
TGATCGAGGACCAAGAGGCACGGCTTCGGAACCTGCGGCTGTTGCTGGGC
GAGATTCCTGCCGTTCACAAGCCCTTGCTCTGCAAGCTCACCGCCATGTG
CCACCGCCTCCTTCAAGgtaatgttcaaccgatcgtctggctctgactcc
cgtccgctcactccacttttcctccctttcttcttcccacagAGCCGAGG
AACGGTCTTACATCTCGTTACCTCGCTGAGTGCATGGCCCCTGGCCTCGT
CCGCTCGCCCTACATGCCCGACTCCATCTCAGCCCGCATCGAGCTCGCTA
GATTGATGCAGAATGAGGAAGAGATCATCGTCACGCAGgtgctccatgcg
caattcctctttgtctccttagttcctttcctccttcttcgcattggtat
ttctccttcctcacccgccctccctccctcccttcccctctctcagGCCC
TTATCGAACACCGCCCCCTCGTCCTTTCAGACCTGGACGCGGAGCAAGAA
GGATACGCCCAACGCCTACAGCTCAAGTGGGATCGTCTTCTTCTCCTCCG
ACATCAGCTCGAGGAGGACCCTACCAGAGACGAAGAAGAAGAGGAAGGGA
AAGGTGAAGGGAAAGAGGGAAGGAAAGATGCGTTAGCCCGTGCGGTCGCC
TCGCGTCTGGCTGGGGTCGAAGCGGCCTTACAGCGCATCCGGTGCGTCTC
CGCCTCCACCGACGAGTGGCAAATCACGGGCGGTGGCTCGCCCGTGCGCC
GGCGACCGCCCGCCTCCTCAGCAGCGTCTTCCTCTTCTCTGCCCAGTTCC
CCGGCTTGCCTCACTCCAGCTGACTCCCTTACGACACCCTCGGACTCGTC
CTCGTCCTCCTTCTCGCCCTCCAAGCAGTCCTTTGCCATAGGCGTGCGGA
AAGACATCCTTGAAGTACTGGAGGCCAAGACCAAGGAGGACGTGGTGCGG
TCTGAGGTCCTGACTCTGACCCCCTCCACCATCGAAGCCCGCCTCCGGGT
GTGTGGCTTTCCCTGTGGTGACCTGAGCGACTTTCGCGCCTCGGgtacgt
ctctctctctctctctctctctctcctctctctctctctctctctctctc
tctctctctctctctctctctctctctctctctctctctctctctctctc
tctctctctctctctctctctgtgtgcgttaggccagcctgtttccatat
catctactgatgctcatactcacatccctccttccctcccaacctgtcca
gGTGGCGGAGTCCTATCTGTGTCGTGCCTCCTCTTCTTTTTCCAGCAGCA
TCCCCAGCACGCCGCCCTCCTGGCCTTTAAGTATGCTCGGAGGCCTGGCT
TTTGCTTCACTCGCGTCATCTGCCGGGTTGTGCGGATGGTCATGGGTGTC
CTCCACCTCGgtacgtctttctccgttcctatccctcccccccacgccac
tgcatgccgtctctctaaccccagtaccctcgtcttcgctcgactccctc
gctaatccagGCCCGTCGGTGCGAGAGGAGCACCTGCTCTTGCACATGTG
CCAAGCGCCCTGGTGGGACTTGCTCTCTGAGgtgcgacgggaggggaggg
aggggggggggggaaggcggctagggcagagaacagaagtaggagcgtgc
cttgatacatctcccccgttgatgaacatcctctaagtccactacctttc
ttaatccgcatcacacccagCCAATGGCGGTCCCCTCTCTGGTTTCTCTC
TCCCTCCTCCTCCTCGACTACCTGGCCCGGCACGAGGCCCTCCGCCCCCA
CGAAGAAGACATTTTCGTCCTGGAGGCCAAGCGGCAGCTCACCTGGGTTC
TCAAGCAAGGCCCGCCCTCCCTGGATGCTGCTTGGCATCTCTGGCTCTCC
GTTCGCCTGGAGAAGCTCCGCGCCTTCGCCCGCGCCGAGAAGGCCCGCGT
CTACCGGAAACAGTTCCCGCAAGAGTTCTCTGCCCTCCCCTCCTACCCCA
ACACCGAACCTGCACCCCCTCCCGCTCTCTCGGAAGCATCCGCACGCCTG
GCATCCATGGCCCTTTCTCCCTCCGCCTCCCCCTCTGCCTCCCCCTCCCG
TACCGCCGGTCCCGCCCACTTCAACGCCGCTGCACCCCTTCCTCCATCGG
TCTCTCTGGTCACGCCGCGGTTGCTGGGTCTCCCCCTCTCCTCCTCTTCC
ATCCTTTCATCCCTCACACCCTCACAATTGATCAGCCTGGAAGCTGCGTT
GCCTCCACAGCACCGAGACTACGCCTGGCGGCTTCTCTATTCTCTCGCTG
GGGATGGGGCCAGCCTCAACACCTTCTTCAAGAAGgtaagggagggaggg
atgagagaggagggaggggttaaagaggaagggaatgataagagaaatgg
gtggcatgaaagacatcctgctgcaatttgaagggttcttcttctcctcc
ctgtggaagagacagaaataatttttctcctcatctctccttttcccttt
tcatacacattttagGCCAAAAACCGCGAGCCCACTCTGTTGGTGCTCAA
GGACATGCAGGGCGGTGTGTTTGGGGGCTTTGCCACTCGGGTTTGGATGG
AAAAAGGCGAGAGCTACTACGGCGACGGGGAGTCCTTCGTCTGGAGCTTG
GTGGGCGAGGTAGGGGCGGAGGGGGAGGCGCCCCTGAGGAAGTACGCGTG
GAGCACGGAAAATTCTTACTTCCAGCTGTCGACGTCCAAGGACGGGCTGG
CCATGGGCGGAGGGGGATCCTTCGCCCTTTTTGTGGACCCGGAGCTCCTG
AATGGCTCGTCGGGTGCCTGTGAGACGTTTTTCTCTTCCCCTCTCCACCT
CCCCCCTTCGGCTTCTCCTCCTGCTGCTGCACCCAGCACTCCTTCGTTGG
CCACGCCTTCATTTCCTCTTCCCTCGTCATTGCCAGCAGTGGCCAAGCAC
ACACAATTCGAGATTCTGGACCTCGAACTGTGGGCGCTCGAAGCGGACTA
CATGGAAAAGACCAGTGCAGCGATGGCCCGGGGGAGGGGAGTCAGTGATG
GGAAGAAGGGCGTGGCGGCCGAGATGGAGTCGGAGGTGGAGAAAGCGGAC
AGGGGGAGGGGCTGGTAAGCTACAGAAAGGACGGCGTGACTTTTTCGATA
GCTCTTGAGAAGGGTGATAATATTAAGATGGATGGACAGATTTGGATGAA
CATATTTGTATTCACATGTCATTGGATTGTTTGATTCCTAGGTTGTGTCT
TTGTGTGTACATGGAAAATGGGAAGGGGTCTGATCTAGAGCAGGATCCCA
TTTGAGGGAGGGATCAGAATGACGTGGAAGAAAGACCGGGAAAGAAGGAT
CTGAAGATCCATTCAAATTGTGGTTTTAAAGCTGGATCCAGAGTGAAGCG
AAG
back to top

protein sequence of NO20G00030.1

>NO20G00030.1-protein ID=NO20G00030.1-protein|Name=NO20G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1603bp
MSWLFGSWLGGGSSAGGEGGSKDRQRSGKESSKIDIHLSGCASSLPASSF
HSLRPQPTPHVKAGNYDLRIPPSPADGLLTGGTPQQHALVEFKRVIQVLL
RERCYPPFSPGGTLSISSSTASNAHDDEEGCVSASTLQDVSDVPPAPMGD
TKKRGNPSLESIPPSKPSSTSSSPLPSSSIIARATANEEATQAEGKASLP
FLTASADESTLASPPPPPPLPPLTAGDTGESSELLLAPFSSHASTTAAVP
DAAVSSAAAAAAAAAAATATKAPTGPDSSAALKVPRPSSLFPSSASSSSS
SSSSSSAAAAPPRSLPPPRQRSRVVQARRERTNDEAGEEAAARRKARQVI
EGAGEGEDPAVAAVLRALEQCVFLGMRRQEFHGVLPFWRMVWTAATGCLQ
LPHGHHPTQQHGHDRRGFLQDPPGQNHPLAEEVPPELQGLRAAYETVLAS
GAVNNVVGRARAWLRLCLNMGCLESSLRALIAQHNHLLQVFYRPSASLLL
CPEGSNILLALVATLESFQFSLSLLPALDQEVVYPFIDWDADEEEEEEGR
KKRRGGRQEKKKKKENKKGKLPPPLREREGKELRSPHSVPPSPQTLIRGL
DATKLEDEEEMKRMRQALLHNPKLSFNEHDRSGHGEEGLGKLLLHQVGHG
LDRLLLASKGLVLDAVGEGRVEGEEADRTRTGSPHRPMRSPQLLHPPHVA
GGGNGGQQVEQVWGESLERLCADSRLSPHALLAPDMALPTVFAEMIDSLA
TDEGAATSSLFDAEVSEPRSVLHILDLANRGFRLPAVPRNAEAATTHFRA
VSVALMEFLDALPEPLLGWHHYDAVIQAVTRSDLIEDQEARLRNLRLLLG
EIPAVHKPLLCKLTAMCHRLLQEPRNGLTSRYLAECMAPGLVRSPYMPDS
ISARIELARLMQNEEEIIVTQALIEHRPLVLSDLDAEQEGYAQRLQLKWD
RLLLLRHQLEEDPTRDEEEEEGKGEGKEGRKDALARAVASRLAGVEAALQ
RIRCVSASTDEWQITGGGSPVRRRPPASSAASSSSLPSSPACLTPADSLT
TPSDSSSSSFSPSKQSFAIGVRKDILEVLEAKTKEDVVRSEVLTLTPSTI
EARLRVCGFPCGDLSDFRASGGGVLSVSCLLFFFQQHPQHAALLAFKYAR
RPGFCFTRVICRVVRMVMGVLHLGPSVREEHLLLHMCQAPWWDLLSEPMA
VPSLVSLSLLLLDYLARHEALRPHEEDIFVLEAKRQLTWVLKQGPPSLDA
AWHLWLSVRLEKLRAFARAEKARVYRKQFPQEFSALPSYPNTEPAPPPAL
SEASARLASMALSPSASPSASPSRTAGPAHFNAAAPLPPSVSLVTPRLLG
LPLSSSSILSSLTPSQLISLEAALPPQHRDYAWRLLYSLAGDGASLNTFF
KKAKNREPTLLVLKDMQGGVFGGFATRVWMEKGESYYGDGESFVWSLVGE
VGAEGEAPLRKYAWSTENSYFQLSTSKDGLAMGGGGSFALFVDPELLNGS
SGACETFFSSPLHLPPSASPPAAAPSTPSLATPSFPLPSSLPAVAKHTQF
EILDLELWALEADYMEKTSAAMARGRGVSDGKKGVAAEMESEVEKADRGR
GW*
back to top
Synonyms
Publications