NO19G02660, NO19G02660 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO19G02660
Unique Name	NO19G02660
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2255
Alignment location	chr19:800258..802512 +

Link to JBrowse

Properties


Property Name	Value
Description	Cellulase 2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr19	genome	chr19:800258..802512 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798	hydrolase activity, acting on glycosyl bonds
GO:0016787	hydrolase activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process
GO:0008152	metabolic process
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR017853	Glycoside_hydrolase_SF
IPR001547	Glyco_hydro_5

Homology

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BLAST of NO19G02660 vs. NCBI_GenBank
Match: EWM26490.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 373.6 bits (958), Expect = 8.700e-100
Identity = 183/387 (47.29%), Postives = 245/387 (63.31%), Query Frame = 0

Query:   94 LQWTSEEGELRVNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRVQ--DPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIE---------------WGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQG-NVACLSEGKYANPNC 462
            L WTSE GE+ +NG PFHLKG+SYFGFET    P GL    T   +F  LR E FNA+R+PFS  +AL P++ +     + +L +L  +  +   +D AAE+ +L+M DMHRL  +  I  LWYD++     + EAW N++ A  D+WN   IDLKNEPHG ATWG+    TDWN AAEEL+  L+ + PQ+ GL FV G +               WG  ++G++ FPIDLG     +R+VYSPHVYGPD + +PYF    FPDN+P IW+  + FVE      AVV+GEWGG+Y       +DK W D+ AK++V+ CLED FYWC+NP+S DTGG+L+ D+ TP+  KL LL +VQPHP+ +  T +G +  C+S G YANP C
Sbjct:   69 LDWTSEGGEILLNGQPFHLKGVSYFGFETPNEVPHGL-WSVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANTIEKELHDLTALELIGNIIDKAAEYGILIMLDMHRLNED-FIPELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAKNFPDNMPDIWKKQWAFVEE-QTDRAVVVGEWGGRY-----ENQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPTFI--TVKGSDQYCISPGAYANPKC 445

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BLAST of NO19G02660 vs. NCBI_GenBank
Match: PDM84795.1 (hypothetical protein PRIPAC_33818 [Pristionchus pacificus])

HSP 1 Score: 320.1 bits (819), Expect = 1.100e-83
Identity = 160/365 (43.84%), Postives = 216/365 (59.18%), Query Frame = 0

Query:  109 PFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRV---QDPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDK-------WNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVACLSEGKYANPNCR 463
            PF LKGI+YFGFE+ T  P G+     +      ++   FNA+R+PFS E+  N    L +    +P L     +  L  F+D AAE  LL+M D HR+   GGI  LWY+N  P S+++  W +++    D+       WN   IDLKNEPH  A+WGNSN ATDWNKAAE +  +L   FP   GL FV GIEWGN ++ +  FPI+ G      RV+YSPH YGP VYDRP FN   FP+NL GI+ + +GF+ +  G + VV+GEWG   GR   G RD  W     +W+ ++C+ +NFYWC+NP+S+DTGG+LEDDW TP   K+ L  R QP+P+      Q    C++ G +   +CR
Sbjct:   22 PFVLKGINYFGFESETYTPHGI-WSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCGSNPGLCGKTALQLLDAFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQVISLWQSLITRYSDRQVQLKWIWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL-SSFP---GLFFVEGIEWGNRLENVAQFPINTGNASLNNRVIYSPHCYGPSVYDRPEFNTQDFPNNLDGIYMAKYGFIVNQTG-HPVVVGEWG---GRAEVGSRDMAWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPTPRKINLTNRAQPNPTKF--QPQNGQICITAGAFPEAHCR 375

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BLAST of NO19G02660 vs. NCBI_GenBank
Match: ADV58317.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58318.1 cellulase 2, partial [Pristionchus pacificus] >ADV58332.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 318.2 bits (814), Expect = 4.400e-83
Identity = 162/362 (44.75%), Postives = 213/362 (58.84%), Query Frame = 0

Query:  105 VNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRVQ---DPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVACLSEGKYANPNCR 463
            VNG P  LKGI+YFGFET T  P G+     +      ++   FNA+R+PFS E+  N    L +    +P L     +  L  F+D AAE  LL+M D HR+   GGI  LWY+N  P S+              +WN   IDLKNEPH  A+WGNSN ATDWNKAAE +  +L      + GL FV GIEWGN ++ +  FPI+ G P    RVVYSPH YGP VYDRP FN   FP+NL GI+   +GF+ +  GQ  VV+GEWG   GR   G RD TW     +W+ ++C+ +NFYWC+NP+S+DTGG+LEDDW TP+  K+ L  R QP+P+     +Q    C++ G +   +C+
Sbjct:    3 VNGQPLVLKGINYFGFETETYTPHGI-WSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIEWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNQTGQ-PVVVGEWG---GRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKF--QAQNGQICITAGAFPEAHCQ 346

[Close]

BLAST of NO19G02660 vs. NCBI_GenBank
Match: ADV58315.1 (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 317.0 bits (811), Expect = 9.700e-83
Identity = 161/362 (44.48%), Postives = 213/362 (58.84%), Query Frame = 0

Query:  105 VNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRVQ---DPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVACLSEGKYANPNCR 463
            VNG P  LKGI+YFGFET T  P G+     +      ++   FNA+R+PFS E+  N    L +    +P L     +  L  F+D AAE  LL+M D HR+   GGI  LWY+N  P S+              +WN   IDLKNEPH  A+WGNSN ATDWNKAAE +  +L      + GL FV GIEWGN ++ +  FPI+ G P    RVVYSPH YGP VYDRP FN   FP+NL G++   +GF+ +  GQ  VV+GEWG   GR   G RD TW     +W+ ++C+ +NFYWC+NP+S+DTGG+LEDDW TP+  K+ L  R QP+P+     +Q    C++ G +   +C+
Sbjct:    3 VNGQPLVLKGINYFGFETETYTPHGI-WSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFT-------ITHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIEWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQ-PVVVGEWG---GRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKF--QAQNGQICITAGAFPEAHCQ 346

[Close]

BLAST of NO19G02660 vs. NCBI_GenBank
Match: ADV58322.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58335.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 317.0 bits (811), Expect = 9.700e-83
Identity = 161/362 (44.48%), Postives = 213/362 (58.84%), Query Frame = 0

Query:  105 VNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRVQ---DPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVACLSEGKYANPNCR 463
            VNG P  LKGI+YFGFET T  P G+     +      ++   FNA+R+PFS E+  N    L +    +P L     +  L  F+D AAE  LL+M D HR+   GGI  LWY+N  P S+              +WN   IDLKNEPH  A+WGNSN ATDWNKAAE +  +L      + GL FV GIEWGN ++ +  FPI+ G P    RVVYSPH YGP VYDRP FN   FP+NL G++   +GF+ +  GQ  VV+GEWG   GR   G RD TW     +W+ ++C+ +NFYWC+NP+S+DTGG+LEDDW TP+  K+ L  R QP+P+     +Q    C++ G +   +C+
Sbjct:    3 VNGQPLVLKGINYFGFETETYTPHGI-WSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIEWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQ-PVVVGEWG---GRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKF--QAQNGQICITAGAFPEAHCQ 346

[Close]

BLAST of NO19G02660 vs. NCBI_GenBank
Match: ADV58328.1 (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 317.0 bits (811), Expect = 9.700e-83
Identity = 161/362 (44.48%), Postives = 213/362 (58.84%), Query Frame = 0

Query:  105 VNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRVQ---DPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVACLSEGKYANPNCR 463
            VNG P  LKGI+YFGFET T  P G+     +      ++   FNA+R+PFS E+  N    L +    +P L     +  L  F+D AAE  LL+M D HR+   GGI  LWY+N  P S+              +WN   IDLKNEPH  A+WGNSN ATDWNKAAE +  +L      + GL FV GIEWGN ++ +  FPI+ G P    RVVYSPH YGP VYDRP FN   FP+NL G++   +GF+ +  GQ  VV+GEWG   GR   G RD TW     +W+ ++C+ +NFYWC+NP+S+DTGG+LEDDW TP+  K+ L  R QP+P+     +Q    C++ G +   +C+
Sbjct:    3 VNGQPLVLKGINYFGFETETYTPHGI-WSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIEWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLEGMYMVKYGFIVNQTGQ-PVVVGEWG---GRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKF--QAQNGQICITAGAFPEAHCQ 346

[Close]

BLAST of NO19G02660 vs. NCBI_GenBank
Match: ADV58314.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58323.1 cellulase 2, partial [Pristionchus pacificus] >ADV58325.1 cellulase 2, partial [Pristionchus pacificus] >ADV58327.1 cellulase 2, partial [Pristionchus pacificus] >ADV58331.1 cellulase 2, partial [Pristionchus pacificus] >ADV58334.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 316.6 bits (810), Expect = 1.300e-82
Identity = 161/362 (44.48%), Postives = 213/362 (58.84%), Query Frame = 0

Query:  105 VNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRVQ---DPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVACLSEGKYANPNCR 463
            VNG P  LKGI+YFGFET T  P G+     +      ++   FNA+R+PFS E+  N    L +    +P L     +  L  F+D AAE  LL+M D HR+   GGI  LWY+N  P S+              +WN   IDLKNEPH  A+WGNSN ATDWNKAAE +  +L      + GL FV GIEWGN ++ +  FPI+ G P    RVVYSPH YGP VYDRP FN   FP+NL GI+   +GF+ +  GQ  VV+GEWG   GR   G +D TW     +W+ ++C+ +NFYWC+NP+S+DTGG+LEDDW TP+  K+ L  R QP+P+     +Q    C++ G +   +C+
Sbjct:    3 VNGQPLVLKGINYFGFETETYTPHGI-WSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIEWGNRLENVAQFPINTGNPSVNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNQTGQ-PVVVGEWG---GRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKF--QAQNGQICITAGAFPEAHCQ 346

[Close]

BLAST of NO19G02660 vs. NCBI_GenBank
Match: ADV58320.1 (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 316.2 bits (809), Expect = 1.700e-82
Identity = 161/362 (44.48%), Postives = 213/362 (58.84%), Query Frame = 0

Query:  105 VNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRVQ---DPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVACLSEGKYANPNCR 463
            VNG P  LKGI+YFGFET T  P G+     +      ++   FNA+R+PFS E+  N    L +    +P L     +  L  F+D AAE  LL+M D HR+   GGI  LWY+N  P S+              +WN   IDLKNEPH  A+WGNSN ATDWNKAAE +  +L      + GL FV GIEWGN ++ +  FPI+ G P    RVVYSPH YGP VYDRP FN   FP+NL GI+   +GF+ +L GQ  VV+GEWG   GR   G +D TW     +W+ ++C+ +NFYWC+NP+S+DTGG+LE DW TP+  K+ L  R QP+P+     +Q    C++ G +   +C+
Sbjct:    3 VNGQPLVLKGINYFGFETETYTPHGI-WSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIEWGNRLENVAQFPINTGNPSVNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNLTGQ-PVVVGEWG---GRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEGDWLTPIPRKINLTNRAQPNPTKF--QAQNGQICITAGAFPEAHCQ 346

[Close]

BLAST of NO19G02660 vs. NCBI_GenBank
Match: ADV58316.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58319.1 cellulase 2, partial [Pristionchus pacificus] >ADV58329.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 315.5 bits (807), Expect = 2.800e-82
Identity = 160/362 (44.20%), Postives = 213/362 (58.84%), Query Frame = 0

Query:  105 VNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRVQ---DPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVACLSEGKYANPNCR 463
            VNG P  LKGI+YFGFET T  P G+     +      ++   FNA+R+PFS E+  N    L +    +P L     +  L  F+D AAE  LL+M D HR+   GGI  LWY+N  P S+              +WN   IDLKNEPH  A+WGNSN ATDWNKAAE +  +L      + GL FV GIEWGN ++ +  FPI+ G P    RVVYSPH YGP VYDRP FN   FP+NL G++   +GF+ +  GQ  VV+GEWG   GR   G +D TW     +W+ ++C+ +NFYWC+NP+S+DTGG+LEDDW TP+  K+ L  R QP+P+     +Q    C++ G +   +C+
Sbjct:    3 VNGQPLVLKGINYFGFETETYTPHGI-WSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIEWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQ-PVVVGEWG---GRAEVGSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKF--QAQNGQICITAGAFPEAHCQ 346

[Close]

BLAST of NO19G02660 vs. NCBI_GenBank
Match: ADV58313.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58324.1 cellulase 2, partial [Pristionchus pacificus] >ADV58336.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 314.7 bits (805), Expect = 4.800e-82
Identity = 159/362 (43.92%), Postives = 212/362 (58.56%), Query Frame = 0

Query:  105 VNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNALRIPFSAEIALNPDRILRVQ---DPDLDNLGHMARLAKFVDVAAEFDLLVMPDMHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEPHGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQGMRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNF-GFPDNLPGIWESSFGFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNFYWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVACLSEGKYANPNCR 463
            VNG P  LKGI+YFGFET T  P G+     +      ++   FNA+R+PFS E+  N    L +    +P L     +  L  F+D AAE   L+M D HR+   GGI  LWY+N  P S+              +WN   IDLKNEPH  A+WGNSN ATDWNKAAE +  +L      + GL FV GIEWGN ++ +  FPI+ G P    RVVYSPH YGP VYDRP FN   FP+NL G++   +GF+ +  GQ  VV+GEWG   GR   G +D TW     +W+ ++C+ +NFYWC+NP+S+DTGG+LEDDW TP+  K+ L  R QP+P+     +Q    C++ G +   +C+
Sbjct:    3 VNGQPLVLKGINYFGFETETYTPHGI-WSYDLNVYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKSALQLLDVFIDRAAERGFLIMLDNHRITPGGGISELWYNNEYPESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIEWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQ-PVVVGEWG---GRAEVGSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKF--QAQNGQICITAGAFPEAHCQ 346

The following BLAST results are available for this feature:

BLAST of NO19G02660 vs. NCBI_GenBank

BLAST of NO19G02660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26490.1	8.700e-100	47.29	cellulase 2 [Nannochloropsis gaditana]	[more]
PDM84795.1	1.100e-83	43.84	hypothetical protein PRIPAC_33818 [Pristionchus pa...	[more]
ADV58317.1	4.400e-83	44.75	cellulase 2, partial [Pristionchus pacificus] >ADV...	[more]
ADV58315.1	9.700e-83	44.48	cellulase 2, partial [Pristionchus pacificus]	[more]
ADV58322.1	9.700e-83	44.48	cellulase 2, partial [Pristionchus pacificus] >ADV...	[more]
ADV58328.1	9.700e-83	44.48	cellulase 2, partial [Pristionchus pacificus]	[more]
ADV58314.1	1.300e-82	44.48	cellulase 2, partial [Pristionchus pacificus] >ADV...	[more]
ADV58320.1	1.700e-82	44.48	cellulase 2, partial [Pristionchus pacificus]	[more]
ADV58316.1	2.800e-82	44.20	cellulase 2, partial [Pristionchus pacificus] >ADV...	[more]
ADV58313.1	4.800e-82	43.92	cellulase 2, partial [Pristionchus pacificus] >ADV...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniR099	ncniR099	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR039	ngnoR039	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO19G02660.1	NO19G02660.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|613682	gene_10952	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO19G02660.1	NO19G02660.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO19G02660 ID=NO19G02660|Name=NO19G02660|organism=Nannochloropsis oceanica|type=gene|length=2255bp
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAAAGATGATGCTTACTAATAATAAAGCTCTCTACACTTGCATGGTG
TTCATATAAAGTTTTGCGCAGCTGGTGCAAAAGGCCTCTGTAGAAGTCGA
GCGGTATGCCGCTTCGGCGTGCCTCATATTCCTTGCTCCTCCCATATTTC
AATGCCTCCAGTTCGTTACTCTGTTGGCCTTCCCCTTTCATATCCCTCGC
CACTTCCCCTCACCGCTACTGACGAGCTCTCTACACCCTATTCTGCTGTC
TTACCTCTCCCCAAAAATAGACCTAGAGATAACAAAGTGTAACCAAAAAA
ATCATTTTATGCCCCTGATTACCAATCCATCCATCTCACATGCTACAGCT
CCAGACTTCCAGATCATTTTACAAGCAAATAAGGCCGAGATCCGGAGTTA
TGGTATCTTCCCACCTCTTTGTCGTCATCCTTGCTTTATGCTCCTCCGTC
CGCTCCACTACCGCTGTCATCTCTTCCTTCGTCGGAACCCTTGACAACGA
CCCTGCTGCAAGGGATCGCCACCTCCTTCCCACAGTGAACGCCAGTAATG
CAGCTGCTACCCTCCCCCGTGGTCTTGAAAACGAGGACATAGCCATATGC
TTTGACTTGGACGTACCATTGCAATGGACATCTGAGGAAGGGGAGCTGCG
CGTGAACGGCTTTCCTTTCCATCTCAAGGGAATCTCATgtatgtcaatac
tttcatttcatttttcaacccactctcctatcattcatttttacacattc
aatcaatctattgcagATTTTGGCTTCGAGACGGGCACCATGTATCCAGG
TGGCCTGTCCGGGAAAACCACCGTGCGTGACGTCTTCACCCTGCTTCGGG
CCGAGGGCTTTAATGCTTTGCGTATCCCTTTTTCAGCCGAGATAGCCCTG
AATCCAGACCGTATCCTCCGCGTCCAAGATCCCGATTTAGATAATCTCGG
ACATATGGCACGCTTGGCCAAATTTGTCGACGTGGCGGCTGAATTTGACC
TCCTTGTGATGCCCGATATGCACCGCCTGTACGCGAATGGTGGGATTGAT
GCGCTCTGGTACGACAACAGGACACCCTACTCCCGTCTTTTGGAAGCCTG
GACAAACATCATGGGGGCGATAGAGGACAAATGGAACTTCGCGTTTATCG
ATTTGAAGAACGAGCCTCATGGGCAAGCCACGTGGGGAAATAGCAACCGG
GCGACAGACTGGAACAAGGCGGCGGAAGAGCTCTCCAAGGCTTTATTTGG
TCGTTTTCCGCAATGGCATGGGCTTGCTTTCGTAGGAGGTATCGAGTGGG
GTAACGCTATTCAAGGAATGCGCAACTTCCCTATTGACTTGGGTCGCCCT
GATTGGACGCGCCGCGTCGTCTACTCCCCTCATGTATACGGACCCGATGT
GTACGACCGACCTTACTTTAATTTTGGTTTTCCGGACAACTTACCAGGCA
TCTGGGAGTCGAGCTTTGGCTTTGTAGAATCCCTCTACGGGCAAAACGCG
GTGGTTATTGGCGAATGGGGCGGTAAATATGGACGAGGTCCCAGTGGGAG
ACGAGACAAGACGTGGGCGGACACTTTGGCTAAGTGGGTCGTAAACCGTT
GCTTGGAGGATAACTTCTACTGGTGTGTCAATCCAGACAGCAGCGACACG
GGGGGTATTTTGGAAGATGACTGGACCACGCCGGTAAAGCCCAAGCTCGA
ACTCCTTCGCCGCGTCCAGCCCCATCCGTCGCTTTTGTACGGGACATCGC
AGGGTAATGTTGCGTGCTTGTCTGAAGGAAAGTATGCGAACCCCAACTGC
CGTCGCAAGTAAATGAGCAAGGAAATATTGCAGAGGGTGAAAATGCGTAT
GGAATTTGAGAACGCAACAAGAGAAAGAAAAAATATAGCTCAAATACCCG
TCAAGAAGTAACTGCTTCCCGAAGAAAGATAGCTATTTTAGATATGAAAA
AGCAGCAAATGAAGAAGAACGGGGGAAGTAAAGACATGCAGCAGGCTGTG
AATAATGGGTGATATTCATAAGACACATAATCATAGGCAGGCTTCGGAAA
TTTCCGAGGAGGAAAAAGTCGACAGAAATTCAGAGGAGGCACTGAAAGTA
CACGATTAATAAAGAGGGAATGATATAGAGCATCACCGAGAAGTGTCAGT
ATAGAAAAGTAGAAGCATTTCCATATCTGATTCAAGTATGCAATACTTCG
GTGTG

protein sequence of NO19G02660.1

>NO19G02660.1-protein ID=NO19G02660.1-protein|Name=NO19G02660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MLQLQTSRSFYKQIRPRSGVMVSSHLFVVILALCSSVRSTTAVISSFVGT
LDNDPAARDRHLLPTVNASNAAATLPRGLENEDIAICFDLDVPLQWTSEE
GELRVNGFPFHLKGISYFGFETGTMYPGGLSGKTTVRDVFTLLRAEGFNA
LRIPFSAEIALNPDRILRVQDPDLDNLGHMARLAKFVDVAAEFDLLVMPD
MHRLYANGGIDALWYDNRTPYSRLLEAWTNIMGAIEDKWNFAFIDLKNEP
HGQATWGNSNRATDWNKAAEELSKALFGRFPQWHGLAFVGGIEWGNAIQG
MRNFPIDLGRPDWTRRVVYSPHVYGPDVYDRPYFNFGFPDNLPGIWESSF
GFVESLYGQNAVVIGEWGGKYGRGPSGRRDKTWADTLAKWVVNRCLEDNF
YWCVNPDSSDTGGILEDDWTTPVKPKLELLRRVQPHPSLLYGTSQGNVAC
LSEGKYANPNCRRK*

Synonyms

Publications