NO19G02640, NO19G02640 (gene) Nannochloropsis oceanica

Overview
NameNO19G02640
Unique NameNO19G02640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3477
Alignment locationchr19:791768..795244 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:791768..795244 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G02640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR099ncniR099Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02640.1NO19G02640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02640.1NO19G02640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02640 ID=NO19G02640|Name=NO19G02640|organism=Nannochloropsis oceanica|type=gene|length=3477bp
ACAGGCAGCAGCACCAGCTGCAGCGCCAACCGCGGCGCCAGCCCAGCAGC
ACCGGTAGTAGCAAGGAGGAGCGGTCTTGCGTCTGGTGTGGTGTGGTCGG
TCTGTCTCCAGCACAGGACGTGAGCTACCAGCAGGAAGCACAGCCTAAGC
CTAATAGTCGTCAGCAGGGTGAAAAAGAATAGTTGTGCCGTATCGTGGAG
CGAGAGGGAATAGGTCCCGCGCCTTACTTCTCGCACACAGGTCTGGGAAG
CAAAACAAAGGGCATTCTGAAAGCACCTTGAGGAATGgtgcgtggcctgg
ccctcttacccatttctcccatcacccctcgcacccacccctcccctccc
ttccctgtggaggaccctaaccctccctccttcccttaaccccttcctcc
ctccttccctccttcctcccttcctcccctcctgacgaactccagGGCCT
GACCGGCATGATCCTCAACACCATCCTCTCCCCCTTCACGCGTGGTCCTT
CCCTTCCCCCATCCCTTCCTCCCTCCCACCCCTCCTCCTCCTCCACCACC
ACCGGCACCAGCGGCAAACGCAGCGCAGTCTACGGAGCACGGACCTTGCA
CTTGTCCTCTCTCCCCCACTCCCTCCCTTCCCATCGTCGAAAAGGCTCGG
CAGGTGCCGCAGTGCTCGTGGCCTCCGTCTCTCACCATCCCAACCATGGA
GGAAGGAAGGAGGGGAGGGAGGGAGGGCGAGCAGGGAGAAAGAAGAGGCC
GAGATATCTTCGGCAACGGTATTATCATGAAGAGCAGCCAGAGGTTGAGG
AGGAAGAGGAGGAGGAGGAAGAAGAGGAGGAGGAACCGCGGCAAATTTTG
AAGGAGAGACATCGAAGGAGGGGGGGAAGGCGATATGGTGGCACGACAGC
AGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCATACACACAC
CCCCAAGGCCGTGTCCCTGGCCACCGAAAGAGTGGCAAGGAAAATCGCGC
CCCTTCCTGCCAACCGTCCTCCCTCTCCCCCTCCCCCTCCCCCCTCCCTT
CACCAACCATGAGCGGCCTGAAACGATCTCGACCCACCACCTCCCCCTCC
TCCTCCCCCTCTTCCTCCCTCGCCTTCTCGCTGTCGTGCAAAGCCAGGTT
CGGGCTCTCTGAGGCAGCCTTCCTCGCCCTCCCTCCCTCCTTCCCTCCCC
TCACGGCCACGAGCAAGATAACCCTGCTTATGCTCAGCGGAGAAGAGGAG
GAAGAGGGAGAGAGGGAGGGTGAGAAGGAGGAAGGATCGATAAGTGCGGT
GGTGAAGCGGAATGTGGCAGCCAAGCAGCTCCGGAAAGgtgaggaaggga
aggaaggagggagggaaggagagagagaaggaagaagggagggagggaga
aagggatatctggccctattgtcatgacctctaatcctactcaccctctc
tccctccctccctccctccctgccttccttccttcccgcacttaaatcag
AAGCCGCTGCTGCCGCTGCCCAGGACACCTCCCCCTTCCTCCTTCCCTCC
CTCGTGCATTGTCCGACCTTCCGCCTCTTGCCTGAGGAGGAGGTGGAGGT
GATGGGGAGGGATGATCCCTCCCTCCGTCGTCGTCGCTCGGAACGCATCG
CCGAAGCTTATTCGGACGATGAGgtacggccctggccctccctccctgcc
tccctccctcccttcctccctccctttctttcccacgcttccactccatg
atttcctcatcctccttcccttactccctcccttcttcatttccttcctt
ctttttccccgtggcagGAGGGCGGCCTTGCATCCATTTATGTCCCTCGT
CGGGTTAATGTAAGGAGGAGGAAGACGGAGGCTGTGACCAAACCGAGGCG
AGGACGAGGGGGAGAGAGGAGAGGAAGGAGGAAGAACAGACAACCCATGG
AAGAGGCAGAACAAGAAGAAGAAGAGGAAGAGGAGGAGGAGGAGGGGGAG
GAGGAGGAGGAAGAGGAGGAGGAGGAGGTTGAGGAGAGTAGCAGCAGTGA
CGAAGAAGAGGGAGTAGGGGAGGAGAAGAGACGTGTAGTGAGGAGAGGAA
GTCTGCTGCGGCATGTCATGGAGGGTCAGGGGGAGGAGGAGGAGGAAACG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGAGGAGG
AGGAGGAGGAGGAGGTTGTTGTCACGGCGTCACGGAGAGGGAGAGGACGA
GGAGGAGGGAAGGAGAGAAGGGGGATAAGGCGGCTTCGAAAAGGCTTTCG
ATCTTCTTCTTTGTCGCTATTTGCTAGGCGCGCCATGAGCTCTCAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAAGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGCGCCACGCAAGTCC
ACACGCTCGACGTCTTTGACTTCTGTGTACGGAGGTTATCGCCCTTCCTT
TCCTCCCTCCCTCCCTCCCTCCCTCCGTCCCACTCTACAGGAGCAAGCGC
GAAGGGGAGTGGCGAGGATGACGAGGAAGCGAGAAAGGGAGGGAAGGAGG
AAGGATAGAGAAGAGGAGGAAGAGAAGCAGCAGCAACAGTTGTCGTCCTC
TTGGAAACGGCAGCGGGTGCGGCGGGGGGTAGGGGGAGCGTAGGAAGGGA
AGGAGGGAGGGAGGGAAGgtgtctactcccctttcttttcaggcatgaat
aagggaatgattagggaatgagtaaggattgatgacgaaaaagagcgaca
agaagaagaaaaagaagaggagaaagaagacaaagaagaagaagaagaat
atatatacagagagaaagaaagaaaggaagaagaaaaaggatggaaggag
gttaggcggaaaagagagaaggatggtgaaggacagagggaggaagaggg
agtgtgggcgtgcatgaagaggctgatagggtgatgagtatggaggtagc
gataatgggagagagagagctggttgtgcacgtgggagggaaggagggag
ggagggaagGAAGGAAGGAGGGAGGTTCGAAATAAATAGGTGTGAAAAGG
AATGGAAGGGAGGGAGGGAGGGAGGGGGGGAGGGAGTCTATATGCACACG
AGGAACGAGGCCGAGGGAAAAGAAAAAAAGCACGAATAAATGATGTGGTC
AGGAAAGGAGGGAAGGAGGAGGGATACTGTCGTGCCTGTGTTGCTCCTCC
CCCCCGCCCTCCCCCTCTCCCTCCCCT
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protein sequence of NO19G02640.1

>NO19G02640.1-protein ID=NO19G02640.1-protein|Name=NO19G02640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=715bp
MGLTGMILNTILSPFTRGPSLPPSLPPSHPSSSSTTTGTSGKRSAVYGAR
TLHLSSLPHSLPSHRRKGSAGAAVLVASVSHHPNHGGRKEGREGGRAGRK
KRPRYLRQRYYHEEQPEVEEEEEEEEEEEEEPRQILKERHRRRGGRRYGG
TTAAAAAATTTTTTTTAAAAAAAAAAAAAAAAAYTHPQGRVPGHRKSGKE
NRAPSCQPSSLSPSPSPLPSPTMSGLKRSRPTTSPSSSPSSSLAFSLSCK
ARFGLSEAAFLALPPSFPPLTATSKITLLMLSGEEEEEGEREGEKEEGSI
SAVVKRNVAAKQLRKEAAAAAAQDTSPFLLPSLVHCPTFRLLPEEEVEVM
GRDDPSLRRRRSERIAEAYSDDEEGGLASIYVPRRVNVRRRKTEAVTKPR
RGRGGERRGRRKNRQPMEEAEQEEEEEEEEEEGEEEEEEEEEEVEESSSS
DEEEGVGEEKRRVVRRGSLLRHVMEGQGEEEEETEEEEEEEEEEEEEEEE
EEEEEEEEEEEEEDEEEEEEEEVVVTASRRGRGRGGGKERRGIRRLRKGF
RSSSLSLFARRAMSSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEAPRKSTRSTSLTSVYGGYRPS
FPPSLPPSLRPTLQEQARRGVARMTRKREREGRRKDREEEEEKQQQQLSS
SWKRQRVRRGVGGA*
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Synonyms
Publications