NO19G02550, NO19G02550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_008911178.1 (hypothetical protein PPTG_15656 [Phytophthora parasitica INRA-310] >ETI38090.1 hypothetical protein F443_16101 [Phytophthora parasitica P1569] >ETN03405.1 hypothetical protein PPTG_15656 [Phytophthora parasitica INRA-310] >ETO66861.1 hypothetical protein F444_16086 [Phytophthora parasitica P1976]) HSP 1 Score: 79.7 bits (195), Expect = 1.900e-11 Identity = 77/294 (26.19%), Postives = 120/294 (40.82%), Query Frame = 0 Query: 23 QGVEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLK-FGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311 + V +++ LAAG Y ALQ++ + R +K + +A V A E A LI+ E+ N+++ F D ++ + ID+ + DL +LK A+KWS +G GD E+ + G+ A+ + AE P LA L + L VL L+LEN+RDAN + +AY L T ERDA LF+ L + Y P LA + + + L+ IG+K++ L+PP Sbjct: 30 ENVTKKLEVQLAAG---DFYGALQMYKTLFMRLLKGDEPSAEQQDKAVALAQEAALKLIEHDQNTAATEMANLMVSVFSDFHHPVDDAHKQRIRQIDAVFQPK--PQFSADL--AVVLKNAVKWSAEEGARKRGDPELQLLLARAYRTAGDFTHALKHFLHAETPQELADALFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSVGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYAPALARDNSLKSYLSVIGQKFYGLQPP 301
BLAST of NO19G02550 vs. NCBI_GenBank
Match: ETK78310.1 (hypothetical protein L915_15646 [Phytophthora parasitica] >ETL31740.1 hypothetical protein L916_15542 [Phytophthora parasitica] >ETM38137.1 hypothetical protein L914_15497 [Phytophthora parasitica] >ETP07975.1 hypothetical protein F441_15930 [Phytophthora parasitica CJ01A1] >ETP36020.1 hypothetical protein F442_15952 [Phytophthora parasitica P10297]) HSP 1 Score: 79.7 bits (195), Expect = 1.900e-11 Identity = 77/294 (26.19%), Postives = 120/294 (40.82%), Query Frame = 0 Query: 23 QGVEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLK-FGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311 + V +++ LAAG Y ALQ++ + R +K + +A V A E A LI+ E+ N+++ F D ++ + ID+ + DL +LK A+KWS +G GD E+ + G+ A+ + AE P LA L + L VL L+LEN+RDAN + +AY L T ERDA LF+ L + Y P LA + + + L+ IG+K++ L+PP Sbjct: 30 ENVTKKLEVQLAAG---DFYGALQMYKTLFMRLLKGDEPSAEQQDKAVALAQEAALKLIEHDQNTAATEMANLMVSVFSDFHHPVDDAHKQRIRQIDAVFQPK--PQFSADL--AVVLKNAVKWSAEEGARKRGDPELQLLLARAYRTAGDFTHALKHFLHAETPQELADALFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSVGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYAPALARDNSLKSYLSVIGQKFYGLQPP 301
BLAST of NO19G02550 vs. NCBI_GenBank
Match: ETL84968.1 (hypothetical protein L917_15364 [Phytophthora parasitica]) HSP 1 Score: 79.7 bits (195), Expect = 1.900e-11 Identity = 77/294 (26.19%), Postives = 120/294 (40.82%), Query Frame = 0 Query: 23 QGVEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLK-FGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311 + V +++ LAAG Y ALQ++ + R +K + +A V A E A LI+ E+ N+++ F D ++ + ID+ + DL +LK A+KWS +G GD E+ + G+ A+ + AE P LA L + L VL L+LEN+RDAN + +AY L T ERDA LF+ L + Y P LA + + + L+ IG+K++ L+PP Sbjct: 30 ENVTKKLEVQLAAG---DFYGALQMYKTLFMRLLKGDEPSAEQQDKAVALAQEAALKLIEHDQNTAATEMANLMVSVFSDFHHPVDDAHKQRIRQIDAVFQPK--PQFSADL--AVVLKNAVKWSAEEGARKRGDPELQLLLARAYRTAGDFTHALKHFLHAETPQELADALFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSVGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYAPALARDNSLKSYLSVIGQKFYGLQPP 301
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_004342754.1 (hypothetical protein CAOG_08153 [Capsaspora owczarzaki ATCC 30864] >KJE98140.1 hypothetical protein CAOG_008153 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 75.9 bits (185), Expect = 2.700e-10 Identity = 78/288 (27.08%), Postives = 121/288 (42.01%), Query Frame = 0 Query: 25 VEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYPECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVV-AEAPSL-LASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGP--PSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309 V A+++ + AG YEA Q++ S R D + + G+T G +L ++L T + D ++L I + L S ++ A R KL++ +LKWS + G + GD ++ ++G W A S LV+ EA +L LA L E + VL +L L N+RDAN L + + PS+ L T ERDAA LFK L + Y+P L + ++ L IG+ +FN+R Sbjct: 10 VLAKLEKSIEAG---DYYEAHQMYRSVYARYAAQNDFDSAILLVYTGSTLFFKHGQTGSAGDLAVLMLDAYTAQPTPLD--EKSLARI-AELFSGYKEDHAT---RDKLVRQSLKWSTAVGRNTRGDPSLHHLFGTAFWREHNYQLAESHLVLGTEASALSLAEMLLE---------WSQKGSPSELELFITRAVLKYLELGNLRDANVLFRTFTAQHPSI-------RNPPFRLPLLNFCHFLLATLERDAAPLFKMLREKYRPSLQRDASFDASLDAIGQCFFNIR 272
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_002997571.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68586.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 75.5 bits (184), Expect = 3.600e-10 Identity = 71/275 (25.82%), Postives = 110/275 (40.00%), Query Frame = 0 Query: 42 YEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLK-FGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311 Y ALQ++ + R +K + +A V A E A LI+ E+ N+++ F D ++ + ID+ S + D+ LK +KWS +G GD E+ + G+ A+ + AE P LA L + L VL L+LEN+RDAN + +AY L T ERDA LF+ L + Y P LA + + + L+ IG+K++ L+PP Sbjct: 45 YGALQMYKTLFMRLLKGDEPSAEQQNKAVVLAQEAALKLIEHDQNTAATEMANLMVSVFSDFHHAVDDAHKQRIRQIDAAFQSK--PQFSADV--AVFLKNTVKWSAEEGARKRGDPELQLLLARAYRTAGDFTHALKHFLHAENPQELADTLFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSVGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYAPALARDSSLKNYLSVIGQKFYGLQPP 300
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_009530815.1 (hypothetical protein PHYSODRAFT_316672 [Phytophthora sojae] >EGZ13386.1 hypothetical protein PHYSODRAFT_316672 [Phytophthora sojae]) HSP 1 Score: 73.9 bits (180), Expect = 1.000e-9 Identity = 70/293 (23.89%), Postives = 119/293 (40.61%), Query Frame = 0 Query: 23 QGVEARIKDLLAAGVKESAYEALQLFSSQAKRQVKDGDVTA-----GVGTALEGATALIDQGYPECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLRPP 311 + V +++ LAAG Y ALQ++ + R +K + +A AL+ A L++ E+ N+++ + D + + + + + A+ + LK A+KWS ++G GD E+ + G+ A+ + +E P LA L + L VL L+LEN+RDAN + +AY L T ERDA LF+ L + Y P LA + + + L+ IG+K++ L+PP Sbjct: 29 ENVGKKLELRLAAG---DFYGALQMYKTLFMRFLKGDEPSAEQQEKAAALALDAALKLVEHDQNTAATEMANLMVSVFADFHHPVDDAHKQRVRLVAAAFEPKPQFSADLAV---FLKNAVKWSAAEGARKRGDPELQLLLARAYRTAGDFTHAMKHFLHSENPQELADALFQ---------WSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAY------VAKCQSAGRPVDLPLFNFTRFLLLTLERDALPLFQMLQERYTPALARDSSLKSYLSVIGQKFYGLQPP 300
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_024388542.1 (Golgi to ER traffic protein 4 homolog [Physcomitrella patens] >PNR45553.1 hypothetical protein PHYPA_015324 [Physcomitrella patens]) HSP 1 Score: 73.6 bits (179), Expect = 1.300e-9 Identity = 75/294 (25.51%), Postives = 111/294 (37.76%), Query Frame = 0 Query: 42 YEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYPECGVELGNILLK-FGTEK----DVSHDLIRRALLHIDSTLASAGGKNGANDLLR-------------------KKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATG---ELDKAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309 YEA Q++ + R + + GA A+++ G CG ELG +L++ F K + D IR T + K+ +ND L++ALKWS+ G G E++ + GE +W E KA V P A + E ++ VL +L+L N+RDAN L S+ L T ERDA LFK L Q Y+P L + + L +IGE++FNL+ Sbjct: 27 YEAQQMYKTIHSRYMHAKKYNEAIELLNSGAVAMLNHGEVTCGTELGVLLIQTFNVAKLPFDSSTLDQIRTIYNAYPRTAGTRQEKSSSNDTSNLGVESSEAAVIAKTRVEGCTSFLRSALKWSIETGGFPRGAPELHDMLGEYIWTESPHPETMKASQHFVRGNQPETFAKVVVE---------CMDKCYPGEADLVVARAVLLYLSLGNLRDANRLWD-----SVRQRLSDSSQELPDTPLLHFIKFLLLTLERDALPLFKMLRQKYKPSLDRDTSLDEYLDEIGERFFNLQ 306
BLAST of NO19G02550 vs. NCBI_GenBank
Match: XP_021735646.1 (Golgi to ER traffic protein 4 homolog [Chenopodium quinoa]) HSP 1 Score: 70.1 bits (170), Expect = 1.500e-8 Identity = 72/276 (26.09%), Postives = 110/276 (39.86%), Query Frame = 0 Query: 39 ESAYEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYP---ECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWA-TGELD--KAVSRLVVAEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQAYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309 E YEAL + S A Q+K VT G AL L+ +P + L I F H + + L +A + A L+AA++WS+ G D G +E++T+ E +++ T E+D K V +P A L + + VL +LAL NMRDAN ++ + LQT ERDA LF+ L Q Y+ + ++PA+ L +I EK++ +R Sbjct: 46 ERYYEALDILESGACLQLKHDQVTCGAELALLFVETLVKGKFPYNDDLLDRLRKIYEAFPRNAVPDHVGDDDDMQKLSEALGAAKIRVEA----CASFLRAAIRWSIELGPDRNGSRELHTMLAEYIYSETPEVDMAKVSFHFVRGNSPKKFADTLVD---------FMEKCYPGEDDLAIARAVLMYLALGNMRDANYVLN-----EVKKQAESKELDFPDSDLMQFINYLLQTLERDALPLFRMLRQSYKSSIDIDPAFNEFLDEIAEKFYGVR 303
BLAST of NO19G02550 vs. NCBI_GenBank
Match: PKC76312.1 (DUF410-domain-containing protein [Rhizophagus irregularis]) HSP 1 Score: 68.9 bits (167), Expect = 3.300e-8 Identity = 72/298 (24.16%), Postives = 115/298 (38.59%), Query Frame = 0 Query: 28 RIKDLLAAGVKE-SAYEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYPECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVV--AEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQ--------------AYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309 ++ D L V+E + YEA Q++ + +R +K + + GA L+ G++L L+ E+ +S RA L L N+ RK+ + A+ W++ G + GD E++ GEL W +A + AE+ L E + VL +L L ++R+A A P+L + T +RDAADLF L Y+ L++EP++ LL KIGE +FNLR Sbjct: 9 KVLDKLKVSVEEGNYYEAHQMYRTVCRRYIKQRKYMSAIDLLYSGAETLLKHKQTGSGIDLSLYLIDAYNEEQMSVTEESRARLIQLLELFP------HNEPGRKRFIDVAISWTVKFGENPAGDPELHHFVGELFWKDKMYHEAEPHFLAGNAESSKSYGKMLAE---------WSGKDHPSKRGAYIARAVLQYLCLRSIREAKTSFDTFIAEIDSSIKSGTAQYQPTL--TGDKIEVAIYSLSLLNFLQLLILTVQRDAADLFINLRNKYKNDLSIEPSFDELLNKIGEIFFNLR 289
BLAST of NO19G02550 vs. NCBI_GenBank
Match: EXX55362.1 (Get4p [Rhizophagus irregularis DAOM 197198w] >GBC27701.1 ER membrane insertion protein get4 [Rhizophagus irregularis DAOM 181602] >PKC00735.1 DUF410-domain-containing protein [Rhizophagus irregularis] >PKC03581.1 DUF410-domain-containing protein [Rhizophagus irregularis] >PKK79672.1 DUF410-domain-containing protein [Rhizophagus irregularis] >PKY28760.1 DUF410-domain-containing protein [Rhizophagus irregularis] >POG70476.1 hypothetical protein GLOIN_2v1615114 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 68.2 bits (165), Expect = 5.700e-8 Identity = 71/298 (23.83%), Postives = 115/298 (38.59%), Query Frame = 0 Query: 28 RIKDLLAAGVKE-SAYEALQLFSSQAKRQVKDGDVTAGVGTALEGATALIDQGYPECGVELGNILLKFGTEKDVSHDLIRRALLHIDSTLASAGGKNGANDLLRKKLLKAALKWSLSKGLDVYGDKEINTIYGELLWATGELDKAVSRLVV--AEAPSLLASKLKEGXXXXXXXXXXXXXXXXXXXRLLGLGVLSFLALENMRDANALIQ--------------AYGPPSLXXXXXXXXXXXXXXXXXXXXXXXLQTCERDAADLFKGLLQVYQPYLAVEPAYQGLLAKIGEKYFNLR 309 ++ D L V+E + YEA Q++ + +R +K + + GA L+ G++L L+ E+ +S RA + L N+ RK+ + A+ W++ G + GD E++ GEL W +A + AE+ L E + VL +L L ++R+A A P+L + T +RDAADLF L Y+ L++EP++ LL KIGE +FNLR Sbjct: 9 KVLDKLKVSVEEGNYYEAHQMYRTVCRRYIKQRKYMSAIDLLYSGAETLLKHKQTGSGIDLSLYLIDAYNEEQMSVTEESRARIIQLLELFP------HNEPGRKRFIDVAISWTVKFGENPAGDPELHHFVGELFWKDKMYHEAEPHFLAGNAESSKSYGKMLAE---------WSGKDHPSKRGAYIARAVLQYLCLRSIREAKTSFDTFIAEIDSSIKSGTAQYQPTL--TGDKIEVAIYSLSLLNFLQLLILTVQRDAADLFINLRNKYKNDLSIEPSFDELLNKIGEIFFNLR 289 The following BLAST results are available for this feature:
BLAST of NO19G02550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02550 ID=NO19G02550|Name=NO19G02550|organism=Nannochloropsis oceanica|type=gene|length=3033bpback to top protein sequence of NO19G02550.1 >NO19G02550.1-protein ID=NO19G02550.1-protein|Name=NO19G02550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bpback to top Synonyms
Publications
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