NO19G02480, NO19G02480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02480 vs. NCBI_GenBank
Match: CBN78186.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 304.7 bits (779), Expect = 2.500e-79 Identity = 164/235 (69.79%), Postives = 192/235 (81.70%), Query Frame = 0 Query: 3 VPESILKXXXXXXXXXXXXXXXXXXXXXXXXXXXGETVKRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIKSVL 238 +PES+LK XXXXXXXXXXXXX E +RAE+YVKEY END IR RREAKAAG+ +VPAEA V V+RIRGI GVSPKV+KILQLLRLRQI+N VF+KLN +T+ +LR VEPY+AYGYPNLK+VRELIYKRG+ KVNKQR+P++DN+++E LGK G+ICVEDLIHEIYTVGPNFK A NFLWPFKLS+P GG+++K HF EGGDAG RGAKINALIK +L Sbjct: 13 IPESVLKKRRTKEAIAAKXXXXXXXXXXXXXAKKTEIFERAERYVKEYRAQENDSIRFRREAKAAGNIHVPAEAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINALIKRML 247
BLAST of NO19G02480 vs. NCBI_GenBank
Match: XP_020625376.1 (uncharacterized protein LOC110062769 [Orbicella faveolata]) HSP 1 Score: 297.7 bits (761), Expect = 3.100e-77 Identity = 140/199 (70.35%), Postives = 172/199 (86.43%), Query Frame = 0 Query: 38 ETVKRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIKSV 237 E KRAEKYVKEY + E D+IR++R + +FYVPAEAK+AFV+RIRGINGVSPKV+KILQL RL QIHNGVFIKLN +TIN+LR V+PY+AYGYPNLKSVRELIYKRGY KVNKQR+ +TDN+++EQ+LGK+G+IC+EDLIHEIY+VG +FK+A NFLWP KLSSP+GG+++ THF+EGGD G R KIN LI+ + Sbjct: 484 EIFKRAEKYVKEYRQQEKDEIRMKRMGRKHANFYVPAEAKLAFVIRIRGINGVSPKVRKILQLFRLLQIHNGVFIKLNKATINMLRIVQPYVAYGYPNLKSVRELIYKRGYGKVNKQRIAITDNSIIEQQLGKHGIICIEDLIHEIYSVGEHFKEANNFLWPMKLSSPRGGFRKITTHFVEGGDHGNREDKINQLIRKM 682
BLAST of NO19G02480 vs. NCBI_GenBank
Match: XP_008861018.1 (hypothetical protein H310_00144 [Aphanomyces invadans] >ETW09607.1 hypothetical protein H310_00144 [Aphanomyces invadans]) HSP 1 Score: 297.0 bits (759), Expect = 5.300e-77 Identity = 141/197 (71.57%), Postives = 168/197 (85.28%), Query Frame = 0 Query: 41 KRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIKSVL 238 K AEKYVKEY +E + LRR+AKAAG+FYVPAEAKVAFV+RIRGI GVSPKV+KIL+L RL QI NGVF+KLN +TIN+LR VEP+IAYGYPNLKS RELIYKRG+ K+NKQR+ LTDN+LVE+ LGK+G+IC+EDLIHE++T GP+FK+AANFLWPF+LSSP GGY +K HF EGGD G RG +IN IK +L Sbjct: 66 KSAEKYVKEYRSIEKQNVLLRRQAKAAGNFYVPAEAKVAFVVRIRGIIGVSPKVRKILKLFRLTQIQNGVFVKLNKATINMLRLVEPFIAYGYPNLKSTRELIYKRGFGKINKQRIALTDNSLVEKVLGKFGIICMEDLIHEVFTCGPHFKEAANFLWPFQLSSPNGGYTQKLLHFAEGGDHGNRGEEINKFIKQIL 262
BLAST of NO19G02480 vs. NCBI_GenBank
Match: XP_001628718.1 (predicted protein [Nematostella vectensis] >EDO36655.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 297.0 bits (759), Expect = 5.300e-77 Identity = 140/197 (71.07%), Postives = 175/197 (88.83%), Query Frame = 0 Query: 38 ETVKRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIK 235 E KRAEKYVKEY + E D++R+++ AK G+FYVP EA++AFV+RIRGINGVSPKV+KILQLLRLRQI+NGVF++LN +T N+LR V+PYIA+GYPNLKSVRELIYKRGY KV+KQR+ LTDN++VE+ LGK+G+ICVEDLIHEI+TVG +FK+A+NFLWPFKLSSPKGG+++K THF+EGGD G R KIN L++ Sbjct: 46 EIFKRAEKYVKEYRQKEVDELRMKKMAKKHGNFYVPPEARLAFVIRIRGINGVSPKVRKILQLLRLRQINNGVFVRLNKATANMLRIVQPYIAFGYPNLKSVRELIYKRGYGKVDKQRVALTDNSIVEKVLGKHGIICVEDLIHEIFTVGEHFKEASNFLWPFKLSSPKGGFRKKTTHFVEGGDHGNREDKINGLVR 242
BLAST of NO19G02480 vs. NCBI_GenBank
Match: XP_009830197.1 (hypothetical protein H257_06611 [Aphanomyces astaci] >ETV80273.1 hypothetical protein H257_06611 [Aphanomyces astaci]) HSP 1 Score: 295.8 bits (756), Expect = 1.200e-76 Identity = 139/197 (70.56%), Postives = 167/197 (84.77%), Query Frame = 0 Query: 41 KRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIKSVL 238 K AEKYVKEY +E + LRR+AKA G+FYVPAEAK+AFV+RIRGI GVSPKV+KIL+L RL QI NGVF+KLN +TIN+LR VEP+IAYGYPNLKS RELIYKRG+ K+NKQR+ LTDN+LVE+ LGK+G+IC+EDLIHE++T GP+FK+AANFLWPF+LSSP GGY +K HF EGGD G RG +IN IK +L Sbjct: 64 KSAEKYVKEYRSIEKQNVLLRRQAKAVGNFYVPAEAKIAFVVRIRGIIGVSPKVRKILKLFRLTQIQNGVFVKLNKATINMLRLVEPFIAYGYPNLKSTRELIYKRGFGKINKQRIALTDNSLVEKVLGKFGIICIEDLIHEVFTCGPHFKEAANFLWPFQLSSPNGGYTQKLLHFAEGGDHGNRGEEINKFIKQIL 260
BLAST of NO19G02480 vs. NCBI_GenBank
Match: XP_013380988.2 (60S ribosomal protein L7 [Lingula anatina]) HSP 1 Score: 295.4 bits (755), Expect = 1.500e-76 Identity = 141/235 (60.00%), Postives = 178/235 (75.74%), Query Frame = 0 Query: 3 VPESILKXXXXXXXXXXXXXXXXXXXXXXXXXXXGETVKRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIKSVL 238 VPES+LK E KRAEKYVKEY E D IRL R+A+ AG+FYVPAE K+AFVMRIRGINGV P+ +KI+QL RLRQI+NGVF++LN +T+N+LR EPY+A+GYPNLKSVRELIYKRGY KVN +R+PLTDN ++E++LG+YG+IC+EDLIHEI TVGPNFKQA+NFLWPFKL++P GG+++K HF++GGD G R KIN L++ ++ Sbjct: 12 VPESLLKKRKQNAEMRAKRAKATLLAKKKHRANRREIFKRAEKYVKEYRIKERDDIRLARQARKAGNFYVPAEPKLAFVMRIRGINGVHPRPRKIMQLFRLRQINNGVFVRLNKATVNMLRIAEPYLAWGYPNLKSVRELIYKRGYGKVNSKRIPLTDNEIIEKQLGQYGIICMEDLIHEIMTVGPNFKQASNFLWPFKLNTPNGGWRKKANHFVDGGDYGDRDVKINNLLRKMV 246
BLAST of NO19G02480 vs. NCBI_GenBank
Match: XP_009033491.1 (hypothetical protein AURANDRAFT_52193 [Aureococcus anophagefferens] >EGB12467.1 hypothetical protein AURANDRAFT_52193 [Aureococcus anophagefferens]) HSP 1 Score: 294.7 bits (753), Expect = 2.600e-76 Identity = 171/235 (72.77%), Postives = 195/235 (82.98%), Query Frame = 0 Query: 3 VPESILKXXXXXXXXXXXXXXXXXXXXXXXXXXXGETVKRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIKSVL 238 VPES+LK XXXXXXXXXXXXXXXXXXXXXX T KRAEKY+ EY END IRLRREAKAA S YVP E K+AFV+RIRGI G+SPKVKKILQLLRLRQ+H+GVF+KL G+T +LR VEPYIAYG PNLKSVRE IYKRGY KVNK+R+P+ +N +VE LGKY +ICVEDLIHEIYTVGP+F++AANFLWP KLSSP GG+K K H+ EGGDAG RG KI+ L+K +L Sbjct: 4 VPESVLKKRRTQXXXXXXXXXXXXXXXXXXXXXXXVTFKRAEKYMAEYKAAENDAIRLRREAKAANSIYVPPEGKLAFVIRIRGIIGMSPKVKKILQLLRLRQLHSGVFVKLTGATTKMLRLVEPYIAYGEPNLKSVRECIYKRGYGKVNKKRVPIDNNAVVEDVLGKYDIICVEDLIHEIYTVGPHFREAANFLWPVKLSSPTGGFKAKLLHYNEGGDAGYRGEKIHELVKKML 238
BLAST of NO19G02480 vs. NCBI_GenBank
Match: XP_017567218.1 (PREDICTED: 60S ribosomal protein L7 [Pygocentrus nattereri]) HSP 1 Score: 294.3 bits (752), Expect = 3.400e-76 Identity = 140/197 (71.07%), Postives = 169/197 (85.79%), Query Frame = 0 Query: 40 VKRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIKSV 237 +KRAE Y KEY +L ++RL R A+ AG+FYVPAE K+AFV+RIRGINGVSPKV+K+LQLLRLRQI NGVF+KLN ++IN+LR EPYIA+GYPNLKSVRELIYKRGY K+NKQR+PLTDN+L+E+ LG+ G+IC+EDLIHEIYTVG NFK A NFLWPFKLSSP+GG +K THF+EGGDAG R +IN LI+ + Sbjct: 49 LKRAESYHKEYRELYRREVRLSRMARKAGNFYVPAEPKLAFVVRIRGINGVSPKVRKVLQLLRLRQIFNGVFVKLNKASINMLRIAEPYIAWGYPNLKSVRELIYKRGYGKINKQRIPLTDNSLIEKSLGRSGIICIEDLIHEIYTVGKNFKAANNFLWPFKLSSPRGGMNKKTTHFVEGGDAGNREDQINRLIRKM 245
BLAST of NO19G02480 vs. NCBI_GenBank
Match: GAX93047.1 (Hypothetical protein PINS_000961 [Pythium insidiosum]) HSP 1 Score: 293.5 bits (750), Expect = 5.900e-76 Identity = 137/197 (69.54%), Postives = 168/197 (85.28%), Query Frame = 0 Query: 41 KRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIKSVL 238 K AEKYVKEY ++E + LRR+AK+ G+FYVPAEAK+AFV+RIRGI GVSPKV+KILQL RLRQI NGVF+KLN +TIN+LR VEP++ YGYPNLK+ RELIYKRG+ KV QR+ LTDN+++E+ LG +G+IC+EDLIHEI+TVGP+FK+A+NFLWPF+LSSP GGYK+K HF EGGDAG RG +IN IK VL Sbjct: 44 KSAEKYVKEYRQIEKQNVLLRRQAKSTGNFYVPAEAKLAFVIRIRGIIGVSPKVRKILQLFRLRQIQNGVFVKLNKATINMLRLVEPFVTYGYPNLKTTRELIYKRGFGKVRGQRIALTDNSIIEKSLGHHGIICIEDLIHEIFTVGPHFKEASNFLWPFQLSSPNGGYKQKLLHFCEGGDAGNRGEEINKFIKKVL 240
BLAST of NO19G02480 vs. NCBI_GenBank
Match: OQR97336.1 (60S ribosomal protein L7 [Achlya hypogyna]) HSP 1 Score: 293.1 bits (749), Expect = 7.700e-76 Identity = 141/197 (71.57%), Postives = 166/197 (84.26%), Query Frame = 0 Query: 41 KRAEKYVKEYTKLENDQIRLRREAKAAGSFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTINLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPNFKQAANFLWPFKLSSPKGGYKEKKTHFIEGGDAGARGAKINALIKSVL 238 K AEKYVKEY +E + LRR+AKAAG+FYVPAEAKVAFV+RIRGI GVSPKV+KIL+L RL QI NGVF+KLN +TIN+LR VEP+IAYGYPNLKS RELIYKRG+ K+NKQR+ LTDN LVE+ LGK+G+IC+EDLIHEI+T GP+FK+AANFLWPF+LSSP GGY +K H+ EGGD G RG +IN IK L Sbjct: 68 KSAEKYVKEYRAIEKQNVLLRRQAKAAGNFYVPAEAKVAFVIRIRGIIGVSPKVRKILKLFRLVQIQNGVFVKLNKATINMLRLVEPFIAYGYPNLKSTRELIYKRGFGKINKQRIALTDNALVEKVLGKFGIICIEDLIHEIFTCGPHFKEAANFLWPFQLSSPNGGYTQKLLHYNEGGDHGNRGEEINKFIKQCL 264 The following BLAST results are available for this feature:
BLAST of NO19G02480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02480 ID=NO19G02480|Name=NO19G02480|organism=Nannochloropsis oceanica|type=gene|length=2619bpback to top protein sequence of NO19G02480.1 >NO19G02480.1-protein ID=NO19G02480.1-protein|Name=NO19G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top Synonyms
Publications
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