NO19G02430, NO19G02430 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02430 vs. NCBI_GenBank
Match: EWM28051.1 (fungal specific transcription [Nannochloropsis gaditana]) HSP 1 Score: 96.7 bits (239), Expect = 4.000e-16 Identity = 70/252 (27.78%), Postives = 103/252 (40.87%), Query Frame = 0 Query: 328 AELMTGALSRALDMQTVDHKKALAVLRLWSLCAYTTGVDHTWGLLVNASHLLQRAGHRLTHTREWVFVGPEAESTLTVTNPSFDWND---------------IPEALRLLDDGGVSAISSYVYIDGIFRMFTNQTFSEMFMDPEECNGRMADEKIMPVFVWTRCFDEREKVAFLELMISVAYTQGSNAGEASRVLNALDRHGMHIPCLVRARYMFLNQGSYCSMVVSFFPLP------LPSLEGPSSITSRA 559 A L + R +D + H K LA+LR W + G+D + G AS + R G +ES T +WND +P + L DGG SA+ YVY G +R++T + F++ FM N KI+P F++ ++ F +I E + + ++ G LVRARYM LN+G Y +SF +P +P PSSI S A Sbjct: 606 APLFGETVLRMIDTGRLQHLKTLAILRTWDFYNHKHGIDISCG----ASAAIVRVLALRKSAAYTSGSGESSESVGTNAEQPVEWNDDLLAMDRQDALDQAHMPSYVSSLQDGGDSAVGGYVYCSGQYRLWTGKRFADRFMTASTVNSLFDQTKILPCFLFGSFLAPNDRPNFYRSLIEYMLGPTREGREMTVTADVMELDGHVFKALVRARYMVLNEGQYSCFALSFLQIPGLPVRFVPPTIHPSSIASAA 853
BLAST of NO19G02430 vs. NCBI_GenBank
Match: EWM23734.1 (fungal specific transcription factor domain-containing protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 96.3 bits (238), Expect = 5.300e-16 Identity = 43/59 (72.88%), Postives = 48/59 (81.36%), Query Frame = 0 Query: 77 PQPQGFTCFACRIAKVRCDKTAPCGRCQLLSLECISQGKGPGRPIKTAMPYQKRAARAG 136 PQPQGFTCFACR+AKVRCDK+ PC RC L+LECISQGKGPGRP K + P RA +AG Sbjct: 58 PQPQGFTCFACRVAKVRCDKSTPCNRCSQLALECISQGKGPGRPSKASTP---RARKAG 113
BLAST of NO19G02430 vs. NCBI_GenBank
Match: XP_005852521.1 (hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526] >EKU23311.1 hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 84.0 bits (206), Expect = 2.700e-12 Identity = 53/207 (25.60%), Postives = 92/207 (44.44%), Query Frame = 0 Query: 344 VDHKKALAVLRLWSLCAYTTGVDHTWGLLVNASHLLQRAGHRLTHTREWVFVGPEAESTLTVTNPSFDW----NDIPE-ALRLLDDGGV--SAISSYVYIDGIFRMFTNQTFSEMFMDPEECNGRMADEKIMPVFVWTRCFDEREKVAFLELMISVAYTQGSNAGEASRVLNALDRHGMHIPCLVRARYMFLNQGSYCSMVVSFFPL 544 + H K +LR W + Y T D T G L+ +L + H + E+ + + + +PE LRL + +A+ Y Y++G F+++T+ F+E + E N R ++P +++ F R++ F EL++ T+G + V L G CLV+AR+ +N G Y + +SF PL Sbjct: 50 LQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRIL---ASPIPHGVPICYQASLQENISMYDDRPIEEKLSPHHMPEYVLRLCMESRKEGAAVCGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPL 253
BLAST of NO19G02430 vs. NCBI_GenBank
Match: EWM29550.1 (hypothetical protein Naga_100006g18 [Nannochloropsis gaditana] >EWM29551.1 hypothetical protein Naga_100006g18 [Nannochloropsis gaditana]) HSP 1 Score: 84.0 bits (206), Expect = 2.700e-12 Identity = 53/207 (25.60%), Postives = 92/207 (44.44%), Query Frame = 0 Query: 344 VDHKKALAVLRLWSLCAYTTGVDHTWGLLVNASHLLQRAGHRLTHTREWVFVGPEAESTLTVTNPSFDW----NDIPE-ALRLLDDGGV--SAISSYVYIDGIFRMFTNQTFSEMFMDPEECNGRMADEKIMPVFVWTRCFDEREKVAFLELMISVAYTQGSNAGEASRVLNALDRHGMHIPCLVRARYMFLNQGSYCSMVVSFFPL 544 + H K +LR W + Y T D T G L+ +L + H + E+ + + + +PE LRL + +A+ Y Y++G F+++T+ F+E + E N R ++P +++ F R++ F EL++ T+G + V L G CLV+AR+ +N G Y + +SF PL Sbjct: 50 LQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRIL---ASPIPHGVPICYQASLQENISMYDDRPIEEKLSPHHMPEYVLRLCMESRKEGAAVCGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPL 253
BLAST of NO19G02430 vs. NCBI_GenBank
Match: EWM25637.1 (hypothetical protein Naga_100037g11 [Nannochloropsis gaditana] >EWM25638.1 hypothetical protein Naga_100037g11 [Nannochloropsis gaditana]) HSP 1 Score: 77.4 bits (189), Expect = 2.500e-10 Identity = 70/257 (27.24%), Postives = 107/257 (41.63%), Query Frame = 0 Query: 344 VDHKKALAVLRLWSLCAYTTGVDHTWGLLVNASHLLQRAGHRLTHTREWVFVGPEAESTLTVTNPSFDW----NDIPEALRLLDDGGVSAISSYVYIDGIFRMFTNQTFSEMFMDPEECNGRMADEKIMPVFVWTRCFDEREKVAFLELMISVAYTQGSNAGEASRVLNALDRHGMHIPCLVRARYMFLNQGSYCSMVVSFFPLPLPSLEGPSSIT-----SRALTITPHGCSLSSSSPAASPLPTPGRWNERGGRR 592 + H KALA++R W C VD T G+ ++LL R T + + + L++ S D ++P +R L + VS +V+ G FR++TN FS +M E+ N +AD ++P F + F + F E + S S V + R G + LV RY LN G ++ PL + SI S L TP SLS S + + + E+GG+R Sbjct: 56 LQHDKALAIIRTWERCCELNKVDATCGV----TNLLLRVLASPTPSGVDCIPQVQMRTDLSLWLLSIDKLMEPKNMPATVRSLREEAVSMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPLEYSNAAVHDSIATSVSFSSTLISTPQ-LSLSPRSMSRARIGAFLAGGEKGGKR 307
BLAST of NO19G02430 vs. NCBI_GenBank
Match: EWM29230.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 74.3 bits (181), Expect = 2.100e-9 Identity = 45/127 (35.43%), Postives = 63/127 (49.61%), Query Frame = 0 Query: 423 DDGGVSAISSYVYIDGIFRMFTNQTFSEMFMDPEECNGRMADEKIMPVFVWTRCFDEREKVAFLELMISVAYTQGSN-AGEASRVLNALDRHGMHIPCLVRARYMFLNQGSYCSMVVSFFPLPLPSL 549 DD G SAI S VY G ++ N F+ MFM EE ++ E + P VW R VA+ E + AY +G N GE ++ +DR G+ +PC +R R + GS + V+ PL L L Sbjct: 756 DDDG-SAICSAVYCGGRLQLTLNSRFAAMFMTLEEMEMTISQEIVRPELVWRRLLSPECFVAYNEALCQ-AYFRGQNLGGEVCEIIKCVDRFGLELPCFMRVRIFASSHGSITASVILLLPLQLSRL 880
BLAST of NO19G02430 vs. NCBI_GenBank
Match: EWM29539.1 (hypothetical protein Naga_100006g24 [Nannochloropsis gaditana]) HSP 1 Score: 69.7 bits (169), Expect = 5.300e-8 Identity = 54/227 (23.79%), Postives = 95/227 (41.85%), Query Frame = 0 Query: 344 VDHKKALAVLRLWSLCAYTTGVDHTWGLLVNASHLLQRAGHRLTHT-REWVFVGPEAESTLTVTNPS---FDWNDIPEALRLLDDGGVSAISSYVYIDGIFRMFTNQTFSEMFMDPEECNGRMADEKIMPVFVWTRCFDEREKVAFLELMISVAYTQGSNAGEASRVLNALDRHGMHIPCLVRARYMFLNQGSYCSMVVSFFPLPLPSL---EGPSSITSRALTITP 564 + H++ALA++ W + VD + G A++L+ RA L T V P T P+ + +P + LD+G SA ++Y G FR++T+ FS + D EE N ++P +++ + F + + + S V L R + L+R RY+ N G Y + ++ P+ P E P++ S ++ P Sbjct: 85 LQHERALAIIHTWDTTSRAQRVDVSCG----AANLILRALASLNSTYASPVLQVPVRFGTSVACCPAGELLEGVHVPAFVAELDEGATSASCGFIYTGGEFRIWTDLNFSARYFDAEEANVYHIQAGVLPCYLFGCIIHRTYQEQFFDRLAVHMLKDNTEEKTMSMVAQTLGRDQVVTQNLLRIRYVVRNSGHYACLALNVLPIDYPGAMNGESPAATPSALSSVMP 307 The following BLAST results are available for this feature:
BLAST of NO19G02430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02430 ID=NO19G02430|Name=NO19G02430|organism=Nannochloropsis oceanica|type=gene|length=4896bpback to top protein sequence of NO19G02430.1 >NO19G02430.1-protein ID=NO19G02430.1-protein|Name=NO19G02430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=909bpback to top Synonyms
Publications
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