NO19G02340, NO19G02340 (gene) Nannochloropsis oceanica

Overview
NameNO19G02340
Unique NameNO19G02340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2141
Alignment locationchr19:673236..675376 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:673236..675376 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G02340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02340.1NO19G02340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02340.1NO19G02340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02340 ID=NO19G02340|Name=NO19G02340|organism=Nannochloropsis oceanica|type=gene|length=2141bp
TTCTCGTTCCATAAAACAACCACCACCTCGCTTGCTTGAGCTTCTTGCCT
TGTGCCTGCCCCCTTGATCCTAATAATGATTGCATCACTCTTCACCCTTA
ACTATATCGCGTCGGGCATCTTGCTCCTGTGTCTGCTGTGTGTTATTAGG
TGTCTAGGTCTGTTGGCCTGCTTTCCTTAACTTATACTCTTCTTTCCCGC
CCCTACAGCGCAGACCACCACCACCGCCGTTTGAAGCACAAGCCCCACCT
CCTCCACCTTCCTTTCCCATAAAGgttcgtccacataacgattgtgtgtt
tttttttcattccgccctgtgttcgaaaagccaggggcgtctcgaggtgg
ttgaatggatgcactctccccgtttggcaccagcatcgacaccggcatct
acctctcaataaattttgccaattattaccaaggatcttgatcgctttca
tctcttggaaaggtgtgatgctaccatattccaccctagtcgcgtcatca
tctcagcgagtcccatacgacccttcatcctactcccaccgccctcacca
ttcaaccgccccccgttccccttacttttccagcttgtatgttgtaccat
aatcggtgtccgaaccacgccattttcggtttcagtgccgctccggttgc
tccctctatttgcaaatgcccgacactccccgttcttggccctccgtcac
atttcgcactctcatccgtcctttccactcttccttttttcttgcctttc
cagTAAAATGGTGTCCAAAAGCAGTGGCAGCAAAAGTTCTAAGAAGAGTG
CGGGCAAGTCGTCCTCTTCCTCCTCCTCGGGTCGTTCCATGAAGGACACC
GGGCGTTACATGCCCTCTCACGGGAAGAAGAGTGGGGGCAGCAAGAGCGG
CAGTGGCGTCGGTAAGAAAGCAATCCACAAGCTCCCGATTTCTCATAAGA
AAAAGCCTGCCGCTGCTGGTGCGGCAGCTGCCGCCGCGATCCAAAAGCAG
CAGCAGAAGAAGGCGGCACTGGCTGCAGGAGGAGGAGGAGGAGGAGGAGG
AGCTCGTCTCAACGCAAGTGAGACTCGACGAGCATCGTCTCGCTTGGCGG
CGGCGTCGACGGAGGGGGGAAGAAGGGGAAAGGGGGCAAGAACAAAAGCA
GTGGCCGGGACTCGACCAGTGTAGACGGAATGGGGAAGCGGATGAAGGCG
GCTCCCTCGCTGATGGAGTCGTTGAAGAATGTGCTGTCGTCGGTTGTGGG
GAGGTTTACCAGCAGCTTTGCGTAAGGAGAAGGAAACGGGGATGGGTTAC
GGTCCACTTGAAAAAGAAAAACCTTGACCCTATCCGGAAGCGGATGTGTG
AGGGAGGGAGAGAGGGAGGGAGAGAAGGAAAGATGGAGGGAAGGAAGGAA
AGAAGGAGGGAGGGGGAGGGTTGGGAACTCGGTCGTCGATTGCCATGTTC
TCTCTGGAGCGAATCGCAAACTACGATCTGCGGGAAGAAGAGGGGTAGGG
GGAGAGGGAGGGAGGGAGGGGTCGAAGGGGTAGGGTAAAGGGTTTTTGGG
GCAGGGGCAATATACGGATGGAAGGAAGAGAAAAGAAGGGAGGGAGGGAC
TGTGGGAGGAAACTGGAGCATGTCTTGGGATTCTATGTGTAACCATATGG
GTTCAGAGAGGGCGTAAGGAGGGAGGGAGGGAAAGAAGGGGGAAGGAAGG
GAGGAAGAGCGTATTTATGAGTTGTTTTGGAGGGGGGGAGAGACAGTGTG
TGACAGGGAGGGGTGTAGAGAAAGAGAGAGTGACGGGGGAGGGGAGAGAG
AGTAGCGAGAATTGAAGACGCAGCAAAGACAGTCGTGGACTTCCAGTTTA
CATAGATATGAATGATATTATAGACTGACATCACGGGAAGGGAAGGAGGT
AAGGAGAGAGGGAGGGAGGGAGGAAGGGAAAATGCGGGATACACATTAAT
CCCTTCCGTTGGCACTGAGCGGAACGGAAGCCTGACAAGCGCACCATAAG
GTAGGGAGGGAAAAAAGCACCGACGACATACAGAGAGAATGCAGCAGCAG
AGCTAAAACGACGAAGTGGAAGGGGTGCATAAGACGAGAGTTGGCACATA
CGAAAATAAAACCAACGACAAAACAAGACCTGACACTGTCA
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protein sequence of NO19G02340.1

>NO19G02340.1-protein ID=NO19G02340.1-protein|Name=NO19G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=139bp
MVSKSSGSKSSKKSAGKSSSSSSSGRSMKDTGRYMPSHGKKSGGSKSGSG
VGKKAIHKLPISHKKKPAAAGAAAAAAIQKQQQKKAALAAGGGGGGGGAR
LNASETRRASSRLAAASTEGGRRGKGARTKAVAGTRPV*
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Synonyms
Publications