NO19G02220, NO19G02220 (gene) Nannochloropsis oceanica

Overview
NameNO19G02220
Unique NameNO19G02220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4271
Alignment locationchr19:632461..636731 -

Link to JBrowse

Properties
Property NameValue
DescriptionType ii inositol--trisphosphate 5-phosphatase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:632461..636731 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0046856phosphatidylinositol dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR000300IPPc
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO19G02220 vs. NCBI_GenBank
Match: EWM28392.1 (type i inositol polyphosphate, partial [Nannochloropsis gaditana])

HSP 1 Score: 186.0 bits (471), Expect = 5.400e-43
Identity = 121/333 (36.34%), Postives = 172/333 (51.65%), Query Frame = 0
Query:  536 RQEQLQLKESPSHLTCRIFATSLNCGSCTRVQDL-GRLDEWIPKDGYDLYVLAVQECRMLAQMRKAVHSHLGGPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRISSGIDLVFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEILCRLAASAEVEK----------------SKQGWGLHSGHAWRDVSYNRFFMPPSQLRGMGRTARSPSQEIPVEETEMEVLGEEEGERGREEGVGREMTWTTARGSGSEGG-RKKEGLV 851
            R+E+    E  +  T  IF ++LN G    +  L G L+EW+P  GYD+Y + VQEC +L  +R+A+H HLGGPS + +F+ D+G   +  G IAL  F R   VQ GA   A      R+ +G++LV ++  NKG+VG+A +Y+ + +AF+ AHFASDSGGK R +RR+ DA   L  L+L   E  FD HL+H H  ++GDLNYR +     ++ R+AA+A   K                S QG G       RD    RF  P    +     A S  +++       E  G E  E G+   V  +      RG+  +GG R   GLV
Sbjct:  353 RREETSASERGAS-TATIFTSTLNLGGVKDIAHLGGSLEEWLP-PGYDVYCIGVQECIILDDLRQALHEHLGGPSEYTMFQADVGAATMLYGTIALTAFARASDVQRGAFS-AIDALTSRVKNGVNLVVTKTANKGMVGLAFRYHDSTLAFVTAHFASDSGGKTRLKRRNGDAYVLLRALNLTDTEEGFDFHLEHHHTFVMGDLNYRMKTDAASMITRIAAAATRAKGILNDGFSQTSDAFQPSMQGLGFLGEEEDRDGRNVRFGFPSFDEK--MEDAPSSHRDLASTPAPQEEAGVEWREEGQMSWVREKYLRLYPRGAPGDGGSRSPLGLV 680          
BLAST of NO19G02220 vs. NCBI_GenBank
Match: EWM27419.1 (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 183.7 bits (465), Expect = 2.700e-42
Identity = 110/314 (35.03%), Postives = 161/314 (51.27%), Query Frame = 0
Query:  552 RIFATSLNCGSCTRVQDLGRLDEWIPKDGYDLYVLAVQECRMLAQMRKAVHSHLGGPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRISSGIDL-VFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEILCRLAASAEVE----------------------------KSKQGWGLHSGHAWRDVSYNRFFMPPSQLRGMGRTARSPSQEIPVEETEMEVLGEEEGERGREEGVGREMTWTTAR 837
            ++F ++ N G C+ V+  G +  W+P+ GYDLY+L  QE  +L  +R A+H HLGGP+ + +F +++GD  + NG IA+ IF R   +Q GA+ + A    G +++G+ L +  R  NKG VG++++Y+  +IA + AHFA+D  G  R  RR++DA +TL  L L  D  DFD HLQHD  ILLGDLNYR      +IL R++ SA VE                              +QG G      WRD  Y       ++                 EE+E +  G+EE ER   +  G E   + AR
Sbjct:  443 KVFISTCNVGGCSDVRSFGSIPAWVPR-GYDLYILGFQEVLILDSLRIALHDHLGGPAVYEMFCREIGDATILNGMIAITIFARTVDIQRGAV-VVARSASGTVNTGMSLGIMGRAANKGTVGLSVRYHDLSIACITAHFAADKHGHSRVTRRNQDAVQTLRELSLTYDNEDFDAHLQHDVAILLGDLNYRLTAKPLDILRRVSESAAVEAAWWQNQTASPTGRDRERPRAVALDKGGNERQGIGTGRDRTWRDCRYRSLMFGEAE-----------------EESEWQEGGKEEMERAGSDRDGVEAPTSPAR 737          
BLAST of NO19G02220 vs. NCBI_GenBank
Match: EWM29605.1 (72 kda inositol polyphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 181.4 bits (459), Expect = 1.300e-41
Identity = 138/446 (30.94%), Postives = 198/446 (44.39%), Query Frame = 0
Query:  572 LDEWIPKDGYDLYVLAVQECRMLAQMRKAVHSHLGGPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRISSGIDL-VFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYR-SQCFVGEILCRLAASAEV------EKSKQGWGLHSGHAWRDVSYNRFFMPPSQL----------------RGMGRTARSPSQE--------IPVEETEMEVLG-----------------EEEGERGREEGVGR--------------EMTWTTARGSGSEGGRKKEGL------VGLLSSTRGSACVREQ-----AXXXXXXXXXXXXXXXHWNWVGEVDELSLSRKAEVALSGFQEGPLTFPPTFKYHPKRSVE------DYADVADLRYAY 938
            L +W+P   + LYVL VQEC+ L Q R  VHSHLGGP AF +F  +LGD    +G IA+ +F R D V  GA  L   G   ++++G+ L       NKG+VG++ +YY  ++AF+ AHFASDS G+ R  +R++ AR TL  L L  D  DF+VH QH H I LGD NYR S     E++  +A SA++       ++ +     +   WR +SY  FF  P+ L                R    ++++ SQ         +P   +    LG                 +E        G+G               +M+   +R    E      G+       G      GS  +R+                       WNWVG  DELS S +  V    F E P+TFPP+++++  RS+       DY DV  L +AY
Sbjct:  565 LPQWLP-PSFSLYVLGVQECQCLRQFRADVHSHLGGPEAFVMFGDELGDDQFLHGFIAITLFVRADDVATGAFHL-HKGAVNKVAAGVSLGALGHAPNKGMVGLSCRYYDVSLAFVTAHFASDSKGRNRVSKRNQHARTTLQALSLHNDSDDFEVHHQHHHQICLGDFNYRLSPATPTEVVQLVARSAQISQEIVANEASESNANPTSENWRKLSYKHFFERPTGLTFSLGSIPELPPCLGTRYSSNSSQNVSQPSYGTSGLGLPNSTSSKSYLGGKLPHLFLARSGSNAAKDELNRPPEAHGIGAGFSNVLRRRPSMELDMSSPHSRFGRQESSNPVYGIGSITDGEGPQQQISGSPSLRKNVKPSIVNSSSTQSIEDLGVDMAWNWVGCFDELSRSMRGRVVFYNFTEAPITFPPSYRWN--RSIHGFDLAGDYTDVEQLMHAY 1006          
BLAST of NO19G02220 vs. NCBI_GenBank
Match: EWM29391.1 (phosphatidylinositol- -trisphosphate 5-phosphatase 2 [Nannochloropsis gaditana])

HSP 1 Score: 177.9 bits (450), Expect = 1.500e-40
Identity = 140/514 (27.24%), Postives = 206/514 (40.08%), Query Frame = 0
Query:  553 IFATSLNCGSCTRVQDL-GRLDEWIPKDGYDLYVLAVQECRMLAQMRKAVHSHLGGPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGR-GRISSGIDLVFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEILCRLAAS-----------AEVEKSK-------------------------QGWG---------------------------LHSGHAWRDVSYNRFFMPPSQLRGM----------------------------------------------------------GRTARSPSQEIPVEETEMEVLGEEEGERGREEGVGREMTWTTARGSGSEGGRKKEGLVGLLSSTRGSACVREQAXXXXXXXXXXXXXXXHWNWVGEVDELSLSRKAEVALSGFQEGPLTFPPTFKYHPKRSVEDYADVADLRYAYQVSKGG 944
            +F T+ N G    +  L GRL+EWIP  GYD+YV+ +QEC  + + R A+H HLGGP  F +F  ++G   V  G IAL +  R   V  GA   AA G    R+ +G++LV ++  NKG+ G++ +Y+   +AF+  HFASDSGGKKR   R E+AR+TL  + L  DE  FDVHLQH H  +LGDLN+R +    E++  +A +            E E+S+                         + WG                           +  G  W    Y + F    + R +                                                          G TA +    +P  ++      +E G+R +      E +W      G  G R+     G ++S   S+    Q                 W WV E DEL    +   A + F+EGPLTFPP+F++       D++D   +  AY + K G
Sbjct:  359 VFVTTFNMGPVRNLAALGGRLEEWIPARGYDVYVIGLQECHCVEEFRAALHQHLGGPGMFHMFNAEVGPATVLYGNIALTVLARASDVASGA--FAAVGAEVSRVRNGVNLVVTKAGNKGMTGLSFRYHDATLAFITCHFASDSGGKKRLLERLENARQTLREVKLTDDE-GFDVHLQHHHTFILGDLNFRMRLRAREVVEHVARTVRQMGASVWQEGESERSEAVDTSITQANEAGEIGDEDSLWVSTRPWGQAENDRRHEDNNHVYDKEGGLDQRADAVDQGMNWVSKDYMQLFSHAEEERAVVSYLSNASSYIGSDMSSFSSAHKDSIDITSESDWDNSKGRDSTGDPVASDSERHVTDEGSTAATTDPALPYSDSSER---KESGKRAKSP----EGSWWRWFDRGVRGRRQHSS--GGITSDAFSSFSSSQDQFLVFTSKASTSTSSLWGWVEEDDELRREIRTGQAFADFREGPLTFPPSFRWRRGGCAGDFSDAKRMADAYVLVKKG 860          
BLAST of NO19G02220 vs. NCBI_GenBank
Match: XP_005856242.1 (inositol polyphosphate 5-phosphatase-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU20117.1 inositol polyphosphate 5-phosphatase-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 170.2 bits (430), Expect = 3.100e-38
Identity = 94/226 (41.59%), Postives = 131/226 (57.96%), Query Frame = 0
Query:  572 LDEWIPKDGYDLYVLAVQECRMLAQMRKAVHSHLGGPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRISSGIDL-VFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYR-SQCFVGEILCRLAASAEV------EKSKQGWGLHSGHAWRDVSYNRFFMPPSQL 790
            L +W+P   + LYVL VQEC+ L Q R  VHSHLGGP AF +F  +LGD    +G IA+ +F R D V  GA  L   G   ++++G+ L       NKG+VG++ +YY  ++AF+ AHFASDS G+ R  +R++ AR TL  L L  D  DF+VH QH H I LGD NYR S     E++  +A SA++       ++ +     +   WR +SY  FF  P+ L
Sbjct:   71 LPQWLP-PSFSLYVLGVQECQCLRQFRADVHSHLGGPEAFVMFGDELGDDQFLHGFIAITLFVRADDVATGAFHL-HKGAVNKVAAGVSLGALGHAPNKGMVGLSCRYYDVSLAFVTAHFASDSKGRNRVSKRNQHARTTLQALSLHNDSDDFEVHHQHHHQICLGDFNYRLSPATPTEVVQLVARSAQISQEIVANEASESNANPTSENWRKLSYKHFFERPTGL 294          
BLAST of NO19G02220 vs. NCBI_GenBank
Match: XP_005854386.1 (type i inositol polyphosphate 5, partial [Nannochloropsis gaditana CCMP526] >EKU21974.1 type i inositol polyphosphate 5, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 164.1 bits (414), Expect = 2.200e-36
Identity = 90/223 (40.36%), Postives = 129/223 (57.85%), Query Frame = 0
Query:  544 ESPSHLTCRI--FATSLNCGSCTRVQDLGR------LDEWIPKDGYDLYVLAVQECRMLAQMRKAVHSHLGGPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRISSGIDL-VFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEILCRLAASA 758
            E   H T  +  F ++ N G  T    +        L  WIP D YDLYV+ VQEC ++ + R+AVH HLGGP A+ +  +++GD  + +G IAL IF R   V  GA+     G   R++SG+      R  NKG VG++++ + T++A + AHFASD  G+ R  +R++DARRTL  + L  D  DF +H QH   ++LGDLNYR++    EIL  +A SA
Sbjct:  174 EGQEHATASVLMFVSTYNMGGITLKDAIDNDGLAAVLPTWIPLD-YDLYVIGVQECCIIREFRRAVHKHLGGPEAYVMVGKEIGDDRILHGFIALTIFARTQDVATGAV-YVQEGAVDRVASGVSFGPMGRAPNKGFVGLSMRVHDTSLALITAHFASDKKGRNRLGKRNQDARRTLSDMSLLWDSDDFSIHTQHHFTVVLGDLNYRNRGHPEEILEMVAHSA 394          
BLAST of NO19G02220 vs. NCBI_GenBank
Match: EWM22143.1 (endonuclease exonuclease phosphatase family protein [Nannochloropsis gaditana])

HSP 1 Score: 164.1 bits (414), Expect = 2.200e-36
Identity = 90/223 (40.36%), Postives = 129/223 (57.85%), Query Frame = 0
Query:  544 ESPSHLTCRI--FATSLNCGSCTRVQDLGR------LDEWIPKDGYDLYVLAVQECRMLAQMRKAVHSHLGGPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRISSGIDL-VFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEILCRLAASA 758
            E   H T  +  F ++ N G  T    +        L  WIP D YDLYV+ VQEC ++ + R+AVH HLGGP A+ +  +++GD  + +G IAL IF R   V  GA+     G   R++SG+      R  NKG VG++++ + T++A + AHFASD  G+ R  +R++DARRTL  + L  D  DF +H QH   ++LGDLNYR++    EIL  +A SA
Sbjct:  452 EGQEHATASVLMFVSTYNMGGITLKDAIDNDGLAAVLPTWIPLD-YDLYVIGVQECCIIREFRRAVHKHLGGPEAYVMVGKEIGDDRILHGFIALTIFARTQDVATGAV-YVQEGAVDRVASGVSFGPMGRAPNKGFVGLSMRVHDTSLALITAHFASDKKGRNRLGKRNQDARRTLSDMSLLWDSDDFSIHTQHHFTVVLGDLNYRNRGHPEEILEMVAHSA 672          
BLAST of NO19G02220 vs. NCBI_GenBank
Match: EWM22803.1 (inositol polyphosphate phosphatase-like isoform cra_a [Nannochloropsis gaditana])

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-27
Identity = 75/186 (40.32%), Postives = 111/186 (59.68%), Query Frame = 0
Query:  607 GPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRISSGIDL-VFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEILCRLAASAEVEKSKQGWGLHSG-HAWRDVSYNRFFMPPSQLR 791
            GP  ++ F  ++GD  V +G IA+ IF R   V EGA ++   G   R+++G+ L    R  NKG+VG++L+Y+ T++A + AHFASDS G+ R  +R++DA  TL  L L  D  +FDVH QH H ILLGD+NYR      E+L  ++ SA   K+     L+S    WR+ S+ R ++P S  +
Sbjct:  477 GPERYSQFGAEIGDARVLHGLIAITIFVRSKDVLEGAFQV-QKGAVNRVATGVSLGPMGRAANKGMVGLSLRYFDTSLAVITAHFASDSKGRNRVTKRNKDACTTLRELSLTYDSEEFDVHHQHTHAILLGDMNYRVSASPSEVLSLISKSARQSKAL----LYSAFRNWRETSFARLYLPFSSTK 657          
BLAST of NO19G02220 vs. NCBI_GenBank
Match: EWM22804.1 (inositol polyphosphate phosphatase-like isoform cra_a [Nannochloropsis gaditana])

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-27
Identity = 75/186 (40.32%), Postives = 111/186 (59.68%), Query Frame = 0
Query:  607 GPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRISSGIDL-VFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEILCRLAASAEVEKSKQGWGLHSG-HAWRDVSYNRFFMPPSQLR 791
            GP  ++ F  ++GD  V +G IA+ IF R   V EGA ++   G   R+++G+ L    R  NKG+VG++L+Y+ T++A + AHFASDS G+ R  +R++DA  TL  L L  D  +FDVH QH H ILLGD+NYR      E+L  ++ SA   K+     L+S    WR+ S+ R ++P S  +
Sbjct:  409 GPERYSQFGAEIGDARVLHGLIAITIFVRSKDVLEGAFQV-QKGAVNRVATGVSLGPMGRAANKGMVGLSLRYFDTSLAVITAHFASDSKGRNRVTKRNKDACTTLRELSLTYDSEEFDVHHQHTHAILLGDMNYRVSASPSEVLSLISKSARQSKAL----LYSAFRNWRETSFARLYLPFSSTK 589          
BLAST of NO19G02220 vs. NCBI_GenBank
Match: OQR93744.1 (transmembrane protein [Achlya hypogyna])

HSP 1 Score: 134.8 bits (338), Expect = 1.400e-27
Identity = 122/410 (29.76%), Postives = 167/410 (40.73%), Query Frame = 0
Query:  540 LQLKESPSHLTCRIFATSLNCGSCTRVQDLGRLDEWIPKDGYDLYVLAVQECRMLAQMRKAVHSHL--GGPSAFALFEQDLGD---TLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRISSGIDLVFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEILCRLAASAEVEKSKQGWGLHSGHAWRDVSYNRFFMPPSQLRGMGRTARSPSQEIPVEETEMEVLGEEEGERGREEGVGREMTWTTARGSGSEGGRKKEGLVGLLSSTRGSACVREQAXXXXXXXXXXXXXXXHWNWVGEVDELSLSRKAEVALSGFQEGPLTFPPTFKYHPKRSVEDYADVADLRYAYQVSKGGG 945
            L L E+PS  +  IFAT+ N G  +   D   L +WIP  G+DLYV+ VQEC  LA +R ++ S+L  G    F  + +D+G     L  +G I +LIF   + V  G   +  P     ++ G  L   R  NKG VG A +Y  T+IA +  H ASD  GK + +RR+EDA      LHL+GD+   D  L H H I+LGD NYR        L RL A+ E   S                         Q R   R+A   S  +                         E+ W       +    K   + G+                              W+ V E DEL        A +GF E P++FPPTF+     S+     + D  Y+ QV+ GGG
Sbjct:  525 LPLSETPSQ-SLSIFATTFNMGEGSAPTD---LSQWIPL-GHDLYVVGVQECLDLAALRSSIMSYLERGSRRVFVDYSRDIGSKNTALGYHGYIGVLIFVPQETVASGRFSMPTP-TNPEVNCGKTLNV-RTSNKGAVGFAFRYLDTSIAVVSCHLASDGKGKSQLQRRNEDAALVWQSLHLSGDDHIIDFPLLHHHTIVLGDFNYR--------LSRLQATPETVLS-------------------LVESAMQQRRWPRSAHVASPAV-------------------------ELVWNALHEDDASALAKPPAVDGV------------------------------WSPVLEHDELRAVLHHHSAFAGFAEAPISFPPTFRRIRGMSLVTGHKLEDC-YSLQVANGGG 844          
The following BLAST results are available for this feature:
BLAST of NO19G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28392.15.400e-4336.34type i inositol polyphosphate, partial [Nannochlor... [more]
EWM27419.12.700e-4235.03type ii inositol- -trisphosphate 5-phosphatase [Na... [more]
EWM29605.11.300e-4130.9472 kda inositol polyphosphate 5-phosphatase [Nanno... [more]
EWM29391.11.500e-4027.24phosphatidylinositol- -trisphosphate 5-phosphatase... [more]
XP_005856242.13.100e-3841.59inositol polyphosphate 5-phosphatase-like protein,... [more]
XP_005854386.12.200e-3640.36type i inositol polyphosphate 5, partial [Nannochl... [more]
EWM22143.12.200e-3640.36endonuclease exonuclease phosphatase family protei... [more]
EWM22803.11.100e-2740.32inositol polyphosphate phosphatase-like isoform cr... [more]
EWM22804.11.100e-2740.32inositol polyphosphate phosphatase-like isoform cr... [more]
OQR93744.11.400e-2729.76transmembrane protein [Achlya hypogyna][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02220.1NO19G02220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599389gene_7623Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02220.1NO19G02220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02220 ID=NO19G02220|Name=NO19G02220|organism=Nannochloropsis oceanica|type=gene|length=4271bp
TTCCGCGGAGGTCTTCTTGCTGTTGAGCCATGGCGGCTCCTCCTCCCTCC
CCTCCCTTTGCTCCTTCCCCCGACCCCACCATCGCATCCCCCCCAAAGGC
ATCTTGGACCAATCAATACATCTCACCGCATGACGCTCAGACTCTCTTTT
TAGAAAGCCTTGTTATCCTCTTCCTCTCCATCCTGGCCACGCTGTCCGTG
CTGCTGGCGATCCTCCACAGgcacgtgcgcttgttgttctggcggccatt
tctcctcctcctgaaagcttcctcttcttaccttccccgacccagacact
attttcccgatagagcctcatttttgtttcatcttctttttttttcttat
gatctccccgcactccccatagGAAGTACAACCGGCGTGACCAGAGGCAC
CAGGCAGAACGACGTCGACGGCACCGCGAAATCCGCAAGTTTCTTGACTT
CATCGTCCTGGTCTTGTTTGGGTTTGAGCTATGGCTGTCTCTCAATTGGA
TGGCTGGCACCATTCTCTCGGAGCAGTTGCATGGCCGGAGCTCGTTTGGA
GTGGAAGCCAGGGAGGAGATGACGAGGCGAGGGTGGGAGGGAAGGAGGAA
GGCCTGTCGGGTCGTGGGGGGATTGATCTACGCCATTGAGATCGTTCTTT
ACTTGTGGAATGCGTGCCTGGCCTACAGCATCTATTCATGGATCGTCAAA
AAAGCCCTCCTCCGACGCCTGTACCACCGCATGCAGTTCCTCCTTCTCCT
CTCCCTCCTCGTCTCTCTCACCATCTCTATTGTCCCGCTCTCGCAAAACG
CCTTTGGGGCCACGGCCCATGCCACCTGCTGGCTCGTCAACATCCGCATG
ACCAGTGCCCCCTTTCTCCTCAACAAAATGATCGTCCTCCCAATCTGCTG
GCTCTTCGTCGGCTATTTCTACGCCCTCACTTTGGCCCATATCTGGCGAC
AACCGTCCTCCGGCCCCCTCACCCTGCCAGTCATCAAGTCCTACCAACGC
CTCCGCAGACGCCTTTTCCTCTTCGCATTCGTCTTCTTCCTCTGCTGGAC
ACTCAATGCCCTCTGGTACCTCCTGCTGGCCATCAGGCCGTCCTCCCTCC
CTCGTTCCTTTCCTCTCTTCCTCGTCCTGGGGGTGATGGCAAAGTTCTCT
TATGCGCTCGGTCTTTTGGACGCCCTGGCTTATGGGCTTGGGAGTAGCAG
CATGGGTGGGGTCACTTTTACGTGCCAGAGGATGAGGGCAGGAGGGAGGA
ACAGGGTGGGTGAGTGGTGGAGGAGTATTGTGCGTCGGTGGAGAGAGGGG
GCGGTGGAGGAGGAGGAGGGGGAGGGAGGGGAAGAGGGCGGAGAGATGTG
GGGGGCATCGTCGGAGAGGGAGGGAGAGAGGGAGGGAGGAAGGCCGCATC
TAATGAGTTCGTGGTTCACGTTGTTGGCAGGGGTAGGGGGCACGGGTGAA
GGCGTGGAGGAGGGGATGGAGGAAGGGAGGGGCGAGGTGTTTCCTTGGTC
TAGAGTTGAGGATGTGGTTGAGTCGGCTGAAGGAGGGAAGGAGGGAGGGA
AGGAGGGCGGGCGTGGGAAAAGGGATGAGGAGGAATGGAAGGAGGGCGAA
AGAGTATTAGATGAAGAAGTGGCCTTGTCAAAAATAGGCGGCGGAGGAGA
AGGGAAAGGTGTTGGTGGTAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGAAGGAAGAGAAAGATTGGGAAGGGGGTACAACGCT
TCCCTCCCTCCCTTCTTCTTCCACCTCACCTCTCAGAGACAGGAGCAGCT
GCAGCTGAAAGAAAGCCCTAGCCATCTGACCTGTCGCATATTTGCCACCA
GCCTTAACTGTGGCTCTTGCACCCGGGTCCAGGATTTGGGCCGCCTGGAC
GAGTGGATTCCGAAAGgtgcgtttcccccttccctcctcgctcccccctt
cctccctccctttctttctctcaacctgtacaggtggtggtttcgatccg
tccgtttggaaacagtgcacggaggtcgcctgcaatcttcaagacaccca
ccctccttcgctccatctctccctccctccttccctccctccctttttcc
gcccctccctagACGGCTACGACCTCTACGTCCTGGCAGTGCAAGAGTGC
CGCATGCTCGCTCAGATGCGTAAAGCGGTCCATAGCCATTTGGGCGGCCC
CAGCGCCTTTGCCCTCTTCGAACAGGATCTGGGTGATACCCTCGTTTGCA
ACGgttagaaccaccctcccttcctccctccctccctcccttcctccctt
cctccctctctccctccctctatccctgcctactcgcccctgagtccctt
ccccctcctgctacagtctctcatccctccccctctctcatcttaacatg
tctacatatgtctccatccattcacgctcccctccccgcgtcctttctct
cctctttctctacccccttcccgccccctcaacagGCAAGATTGCCCTCC
TCATCTTCGGCCGTTACGACCACGTGCAGGAAGGAGCCCTCAAGCTTGCG
GCGCCGGGAGGACGAGGGCGTATCTCCAGCGGCATTGACTTGGTCTTTTC
GCGATTCCATAATAAGGgtacgccttgactctctttccgtagtcacgtct
tcgctcgcttgatggtcctgtcctccctccctgacctcgcctcttgtccc
ttccctaaggctcccatcacgcctgcctgtactctttccctctcctcttt
gcttggtctctcaacttctcttttgtctttctctcctgtctccttagtct
gtccattccctcccaaacactgtagactcccccttccccctccctccccc
tttccctcagGTGTGGTGGGTGTGGCGCTGCAGTACTACGGCACAGCCAT
CGCCTTCCTCGTCGCGCATTTTGCCAGTGACAGCGGCGGGAAAAAGCGAT
GGGAACGACGGGATGAGGACGCCAGGCGTACCCTGCATATGCTGCATCTG
GCTGgtgaaaaccctccctccctccctccctccctcccttcctccgtgtc
ccattccccatcacccatccaagacttgctgactccccacattgactcat
tcttttgtccctccctccatttccccttcctcccctccctccctctctcc
ctctctccctctctccctccctcagGTGATGAGAGAGATTTCGATGTCCA
CCTCCAGCACGACCATGTCATCCTGCTGgtacagggggagggaggaagga
agggagggaggaagggagcgagggagcagggggcaatccgtttccggaag
aagcaaaatgtatataatcaccacggtatgcatccaacccccccaccctc
cctccttccctccttccctccctcagGGTGATCTCAACTACCGCTCTCAG
TGTTTTGTGGGCGAGATTCTGTGCCGGCTGGCGGCTTCGGCGGAGGTCGA
GAAGAGCAAGCAGGGCTGGGGCCTTCACTCTGGTCATGCCTGGAGgtaat
aagacgacctttctctctccctccctccctccctccgcccttccccccat
ccatcatccatagggcgatcgcccctctgggccttcccgtatcccaaccc
cctctctcattacccctccctcgccccctcccttcttccctgacttgtcc
agGGACGTTTCCTACAACCGCTTTTTCATGCCACCGTCGCAGCTCAGAGG
GATGGGGAGAACAGCTCGCTCACCATCTCAAGAGATTCCAGTGGAAGAGA
CGGAGATGGAGGTGTTGGGGGAGGAAGAGGGGGAGAGGGGGAGGGAGGAA
GGTGTGGGACGTGAGATGACGTGGACGACGGCGCGTGGGAGTGGGAGTGA
GGGAGGAAGGAAGAAAGAGGGTTTGGTGGGCCTACTCTCCTCGACAAGAG
GGAGCGCGTGCGTGCGGGAGCAGGCAGAGGAGGAGGCGGGGAAGGAGAGG
GGGGAAGAGAGGAAGGAGGAGCATTGGAATTGGGTTGGGGAAGTGGATGA
GCTCTCCCTGTCACGCAAGGCGGAGGTGGCTCTGAGTGGCTTCCAGGAGG
GCCCTCTCACCTTCCCCCCGACCTTCAAATACCACCCGAAGAGGAGCGTA
GAGGACTATGCGGACGTGGCGGACCTGCGGTATGCCTACCAGGTCAGCAA
GGGAGGGGGGAGGAAGGGGGGAGGGCAGGGAGGTGGGGAAGAAGGAGAGT
CGGACTCCGAGCTGGACGGATCGTGTCTTGTTTCATTCGTTGCCGGGCTT
GGAGGGCCGCTTGGTGCTTGA
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protein sequence of NO19G02220.1

>NO19G02220.1-protein ID=NO19G02220.1-protein|Name=NO19G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=981bp
MAAPPPSPPFAPSPDPTIASPPKASWTNQYISPHDAQTLFLESLVILFLS
ILATLSVLLAILHRKYNRRDQRHQAERRRRHREIRKFLDFIVLVLFGFEL
WLSLNWMAGTILSEQLHGRSSFGVEAREEMTRRGWEGRRKACRVVGGLIY
AIEIVLYLWNACLAYSIYSWIVKKALLRRLYHRMQFLLLLSLLVSLTISI
VPLSQNAFGATAHATCWLVNIRMTSAPFLLNKMIVLPICWLFVGYFYALT
LAHIWRQPSSGPLTLPVIKSYQRLRRRLFLFAFVFFLCWTLNALWYLLLA
IRPSSLPRSFPLFLVLGVMAKFSYALGLLDALAYGLGSSSMGGVTFTCQR
MRAGGRNRVGEWWRSIVRRWREGAVEEEEGEGGEEGGEMWGASSEREGER
EGGRPHLMSSWFTLLAGVGGTGEGVEEGMEEGRGEVFPWSRVEDVVESAE
GGKEGGKEGGRGKRDEEEWKEGERVLDEEVALSKIGGGGEGKGVGGRGGG
GGGGGGGGGGGEGRERLGRGYNASLPPFFFHLTSQRQEQLQLKESPSHLT
CRIFATSLNCGSCTRVQDLGRLDEWIPKDGYDLYVLAVQECRMLAQMRKA
VHSHLGGPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPG
GRGRISSGIDLVFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRW
ERRDEDARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEIL
CRLAASAEVEKSKQGWGLHSGHAWRDVSYNRFFMPPSQLRGMGRTARSPS
QEIPVEETEMEVLGEEEGERGREEGVGREMTWTTARGSGSEGGRKKEGLV
GLLSSTRGSACVREQAEEEAGKERGEERKEEHWNWVGEVDELSLSRKAEV
ALSGFQEGPLTFPPTFKYHPKRSVEDYADVADLRYAYQVSKGGGRKGGGQ
GGGEEGESDSELDGSCLVSFVAGLGGPLGA*
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Synonyms
Publications