NO19G02130, NO19G02130 (gene) Nannochloropsis oceanica

Overview
NameNO19G02130
Unique NameNO19G02130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3333
Alignment locationchr19:611003..614335 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:611003..614335 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G02130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02130.1NO19G02130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02130.1NO19G02130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02130 ID=NO19G02130|Name=NO19G02130|organism=Nannochloropsis oceanica|type=gene|length=3333bp
TTTCTGTATTTCATTCATTCAAAAATCATCTCTGCTTCCGGTACCGCTTT
CTAGAATTTCCATTTCCCCCCACCGCCTCCCGCTCCTGCGCCTCCACTCC
CTCCATCGAGGGCCCCCCACATATCTTATCGCCATCGCTTATCTTTATGC
CCGTCAAGACGCACCCACCATCCGCACTCATGTTCATATGCGGATGTGAC
CTGCCGGGCATAACCTGATACTCACGCCACCATGTGCTCAGCAACTGCAG
TCTCAGCATGCCCGCGTCCATCAACAAGTCCTGCAAGGCGACCAAGGGCT
CCAAAAACTCACAGTACACTGCAAACGCCGCCCCCTCCTGCATGAAAGGC
AACAACCTCGGCACCACAACTGCCGGATCATGCCGACAGGCTACGATCAA
GCAATCTGTCCCTTCCAACAACAATCTCCTGCCCTCCGCTAAGGCCCGGA
GACGACTCCGCTTCTTCTCCAGGTACTTCAACCACTTGGGTCGATCAAAG
CTATCCCCTTCTTCCTCTCCCTTGCCAATCTTCCCTTCCTCCACCCTTTC
ATTCACACCTACTGGCTTCTGGTACACGACGAACTTCCCCGACGCCCGCG
CCTTGACCTCCTCCTCGGCCGTCGGTAAGAACCTCTTATCCCCCTCCTCC
TCCTCCTCCTCCACCCCGGCCTCCATCCTCCTCCTCCTCGCCCTCTCCGC
CTCTGCCAATCCCGTTAACGGATAATGGACCAGCGTCCTGGCCAAATGTT
CCTTGGGCAAATTAAAATACTTGACATGGTCCATATGAGCCTGAGCCCCC
GCGAATAAATTCACCACATTTCCATACCCTCCCAATCGCTCAAGGACCGA
GCCCAGCACCACGCCCGAGTAGGAATCGAAGAGCAAGACACGGGAGCCGG
CGGAGACATTGCCATAGGAGAGGAGTTGGGCGATACTGTCTGGACGGATG
GCAGTGCTCTTAACAAGGCCCGACTTCACAAAGAGGGCTTGCACCACATT
TGTCCCGTTCCCGGCTACTGCTCTGACGCGCACGACGTATTTATGCGCCT
TTTTCCTGGTCCACTTCTGCTTTGCGAACGCCGTTTTTTTGTCCCAGGTG
TCTGAATTCGAAGCCAAGGCTTGAATGATCGCGTGGCCAGATGCTCCACT
ATTCTTGAGCTCTTCAATCTCGACCATGGTCATGCGCTGCGCCGTGTTTG
TGTCCGTAAAATCCCTGTTATCCGAGGTAGCACCATCATACTCCCCCACG
CTCGCAGGTCCTCCTCCTCGGGTGAATTCGTTTCCGTCCATGTCGCCCAC
GGCAAGGTCTTCGTAGAGCTCGTTCGTACCCGGCAGAGGGACTAGACCAT
CCGGGTGGACCTCCAAGACACTGCCATAGGGCACACCTATCAATCCACTG
AGCGAGATATTAACCCTACCAAGACGCATCATACCCTTGGACTGCGCGCA
AGCAAAAAAATTTCGGCCATCTCCCATTTGCAGGATTACCCAGGCGCCTT
CTTCGATGACGGGAAGTGCGGCTGGTTGTGAGGCCAGAGGAGGGGAGGTT
GTAATGGGTGGAAGAGGAGGAGATGTGCGGGTACAACAAGCGGTTGCGGA
AGCTTCGGTGCCGCTGACATCGGTCATACTTGCTTGCGAAACCTGTGTTG
TGGTAGGCGTTGAAAGATGCTGTGAGTCTAGGTGCACGGGGTGATATTTG
AATGGTGCCTGGGGGTGGGGAGGTCGGGCGTAGATGATGAGATAATCCTT
GTCTTTGGTCAACTACGGGCTCACCACCGATTCCCACACCTTGAAAGAAA
TGCTTTACTTGTCTGTATTGTGACGGTGGCATAGGGCGGGCACATGTCAT
GCTTATGGTCTCCAGCAGGCATGGAAAGCCATGGCCCCGACCGGCTATTC
GTTGATGACGATCGAGACTGCAGTTGCCGATTGCTTCTGGCTGACATAGG
CTGTCACATTCACGGAGTGACTATGGCATTTTTTCCATACTCATTTCCCT
TCTCACATGATATGAGCCTCCAGCGAAAACACAAGCCCAACGATTTTTTT
CTTGACTCGTGGTGTACTCTTTACTTTTACCTTTTCATTGGCAGCAAGAC
ATCAAATTCCACATGCCCTCTTCGATTAAACCCGCACACACAGGGCTAAG
AGCAGCACCATCACCGCGAGCACGAGCAGAACGAGGAGTCGCAGTAGATG
CTAGCTATGGCGCCGCATCAAGGGCCAAGAAGAAGAAGGCGGCCCGGTCG
AGGCGCCGCCACAGCAGCAGCAACGACGGCATTCTCGTCTCTCCTCCTCC
TGGTAGGAGGCGCACAAGGGAGCCGTGGACATGgtatgtacattatttag
acatttggggtgaacacagtatccccgcaaagtcgcttggggctgattct
gactctcccaattttgaccctaacagCCCTGGGTGGCAAGAAACAAACGG
AAGCGGGCTTCCTCCACTATGCTTCCTGCACCTCCTCAATCTCCCCTTCC
CCCTTCTCGTCTTTTTCCCCTCCGCCATCCTCTTCATCTCCACCATCATC
ATACGCCGTCTTTGTTTCTACTTTCTCTCTGCGTGTAAATCCCTTGCTTG
CCCGAGGCTGGGGCCCCGGCAGTGGCAGCAGCAGCGCCGGCAGTGGCAGC
GGCAGCGGCAGCGGCAACCGTGGACGAAATATGGACGACGACGCCGACGA
TATAGCGCGAGAGCTGTCGGTGTTGGAAGCGGAGCAGGCACGGTTAATGG
CCGAGCTGGAGGCCGCACGTCTCAAGGCACAACTGGCCAAATTACAGCAG
CAGCAGGCTGAACGTGGTGGTGGAGAAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGGCGAAGCAGGTCCAACAGCAGCAGCGGCGGGAAAAGAAGAGGCA
GTAGAGACAATAAGAGCGATGACAACCAGAAAAATAACGAGGAGCTGCAG
GAGAACGCGCCTCGTCCGCCCGTGAGTAGTCGAACGGGCTTGCAAGCAGC
CGTGCCGCTCTCAGCGAAGGGGCCTGCTGGGAAGAAGAAGGCGGTGGTCG
AGAGAGGGTGGGGTGGCCCTACAGAAGGGAGGGGGGGGAGCATGACCAGT
CGCGCGACTCCTTCTTTGCCTTCCGCTCCCGGAGGAGGAGGGGAGGGTGG
AGGGAAGGGGGGGGCGTTGACGGACCCGGGGCAAGAGGAGAGGTATGCGG
AGGTGGTGGAGGAGCTGGTGAGTGCCTTGCAGGATGTGAGCAAGGACAGT
GGGGTGGACATAAAGACGATTGTAAGGGGGCTCAAGGCGGCGAGAGATGG
TGGTAAAGAAGGGGGGGCGGTATAGTGTTTGGG
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protein sequence of NO19G02130.1

>NO19G02130.1-protein ID=NO19G02130.1-protein|Name=NO19G02130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bp
MLAMAPHQGPRRRRRPGRGAATAAATTAFSSLLLLVGGAQGSRGHALGGK
KQTEAGFLHYASCTSSISPSPFSSFSPPPSSSSPPSSYAVFVSTFSLRVN
PLLARGWGPGSGSSSAGSGSGSGSGNRGRNMDDDADDIARELSVLEAEQA
RLMAELEAARLKAQLAKLQQQQAERGGGEGGGGGGGGGGRSRSNSSSGGK
RRGSRDNKSDDNQKNNEELQENAPRPPVSSRTGLQAAVPLSAKGPAGKKK
AVVERGWGGPTEGRGGSMTSRATPSLPSAPGGGGEGGGKGGALTDPGQEE
RYAEVVEELVSALQDVSKDSGVDIKTIVRGLKAARDGGKEGGAV*
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Synonyms
Publications