NO19G02030, NO19G02030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02030 vs. NCBI_GenBank
Match: XP_005853560.1 (ESCRT-I complex subunit VPS28 [Nannochloropsis gaditana CCMP526] >EKU22796.1 ESCRT-I complex subunit VPS28 [Nannochloropsis gaditana CCMP526] >EWM23710.1 Vacuolar protein sorting-associated VPS28 [Nannochloropsis gaditana]) HSP 1 Score: 408.3 bits (1048), Expect = 1.700e-110 Identity = 207/239 (86.61%), Postives = 227/239 (94.98%), Query Frame = 0 Query: 1 MQPPPYDAAIQSQPSKPPRSKFDAPSP-PPSLKQEIKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQEDYTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWLKA 239 MQPPPYDAAIQ QPSKPPR K+++ SP P S+KQEIKLINNAAERRKYEDLADL+SIIKATEHLE AFARDA++++DYTAACSKLISQFKSTEAAVLAAKTVAD +AFM+EYHMDCPRAVERLLRLGVP+TV+NPS DDGRG+AIKVAETVQ+FITAMDGVRLEQRAVDELQPMLTDIMTSL RV GLP +F+ SKKLE+WLVTLNAMRAMD+ITEEQARQLLFDLDQGYSSFHAWLK+ Sbjct: 1 MQPPPYDAAIQQQPSKPPRGKYESLSPTPASMKQEIKLINNAAERRKYEDLADLFSIIKATEHLEIAFARDAISEDDYTAACSKLISQFKSTEAAVLAAKTVADARAFMTEYHMDCPRAVERLLRLGVPSTVLNPSVDDGRGDAIKVAETVQYFITAMDGVRLEQRAVDELQPMLTDIMTSLRRVQGLPAEFLGSKKLEEWLVTLNAMRAMDAITEEQARQLLFDLDQGYSSFHAWLKS 239
BLAST of NO19G02030 vs. NCBI_GenBank
Match: GAY01453.1 (vacuolar protein sorting-associated protein 28 [Pythium insidiosum]) HSP 1 Score: 239.6 bits (610), Expect = 1.000e-59 Identity = 117/211 (55.45%), Postives = 163/211 (77.25%), Query Frame = 0 Query: 26 SPPPSLKQEIKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQEDYTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWL 237 SP P+ E+KL N ERRK+EDL+DL++IIK TEHLE A+ RDA+T E+YT C+KLISQFK+ E A+ + D +AF+S+Y +DCPRA+ERL+R+GVPATV++ +S + + +++ VA+TVQ+FIT MD ++L RAVDE+QP+L ++MTSLT+V GLP DF K+E WL TLN++RA D + ++QARQL FDL++ YSSF A+L Sbjct: 20 SPAPTSAPEVKLWGNTKERRKFEDLSDLFAIIKTTEHLETAYVRDAITPEEYTETCTKLISQFKTAETALRLGGFLDDIEAFISQYRLDCPRALERLVRIGVPATVVH-NSTNRKADSVNVAQTVQNFITLMDVLKLNIRAVDEIQPLLCEMMTSLTQVSGLPADFQGRDKMEGWLRTLNSLRASDELDDDQARQLSFDLERAYSSFMAFL 229
BLAST of NO19G02030 vs. NCBI_GenBank
Match: XP_008915861.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETI55142.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETK94974.1 hypothetical protein, variant [Phytophthora parasitica] >ETL48359.1 hypothetical protein, variant [Phytophthora parasitica] >ETM01457.1 hypothetical protein, variant [Phytophthora parasitica] >ETM54655.1 hypothetical protein, variant [Phytophthora parasitica] >ETM98858.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETO83882.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP24954.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP52945.1 hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 236.1 bits (601), Expect = 1.100e-58 Identity = 115/210 (54.76%), Postives = 163/210 (77.62%), Query Frame = 0 Query: 27 PPPSLKQEIKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQEDYTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWL 237 PPP +EIKL + +RRKYEDLADL++I K TEHLEAA+ RDA+T E+YT AC+KLISQ+K+ E A+ + ++F++EY +DCPRA+ERL+R+GVPATV++ ++ + + +++ VA+TVQ+FIT MD ++L RAVDE+QP+L+++M+SLT V GLP DF K+E WL T+N+MRA + + EEQARQL FDL++ YSSF A+L Sbjct: 23 PPPQQIREIKLWADTKDRRKYEDLADLFAIFKTTEHLEAAYVRDAITPEEYTEACTKLISQYKTAETALRLGGFIDSVESFIAEYRLDCPRALERLVRIGVPATVVH-NTTNRKTDSVNVAQTVQNFITLMDVLKLNIRAVDEIQPLLSEMMSSLTMVSGLPPDFAGRDKIEGWLRTMNSMRASEELDEEQARQLSFDLERAYSSFMAFL 231
BLAST of NO19G02030 vs. NCBI_GenBank
Match: XP_002905306.1 (vacuolar protein sorting-associated protein 28 [Phytophthora infestans T30-4] >EEY68147.1 vacuolar protein sorting-associated protein 28 [Phytophthora infestans T30-4]) HSP 1 Score: 234.2 bits (596), Expect = 4.300e-58 Identity = 119/224 (53.12%), Postives = 168/224 (75.00%), Query Frame = 0 Query: 13 QPSKPPRSKFDAPSPPPSLKQEIKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQEDYTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWL 237 QP + + AP PP +EIKL + +RRKYEDLADL++I K TEHLEAA+ RDA+T E+YT AC+KLISQ+K+ E A+ + ++F++EY +DCPRA+ERL+R+GVPATV++ ++ + + +++ VA+TVQ+FIT MD ++L RAVDE+QP+L+++M+SLT V GLP DF K+E WL T+NAMRA + + EEQARQL FDL++ YSSF A+L Sbjct: 9 QPPSSSSAPYLAPPSPP--VREIKLWTDTKDRRKYEDLADLFAIFKTTEHLEAAYVRDAITPEEYTEACTKLISQYKTAETALRLGGFIDSVESFIAEYRLDCPRALERLVRIGVPATVVH-NTTNRKTDSVNVAQTVQNFITLMDVLKLNIRAVDEIQPLLSEMMSSLTMVSGLPPDFAGRDKIEGWLRTMNAMRASEELDEEQARQLSFDLERAYSSFMAFL 229
BLAST of NO19G02030 vs. NCBI_GenBank
Match: XP_008915860.1 (hypothetical protein PPTG_19403 [Phytophthora parasitica INRA-310] >ETI55141.1 hypothetical protein F443_02164 [Phytophthora parasitica P1569] >ETK94973.1 hypothetical protein L915_02065 [Phytophthora parasitica] >ETL48358.1 hypothetical protein L916_02037 [Phytophthora parasitica] >ETM01456.1 hypothetical protein L917_01972 [Phytophthora parasitica] >ETM54654.1 hypothetical protein L914_02050 [Phytophthora parasitica] >ETM98857.1 hypothetical protein PPTG_19403 [Phytophthora parasitica INRA-310] >ETO83881.1 hypothetical protein F444_02172 [Phytophthora parasitica P1976] >ETP24953.1 hypothetical protein F441_02135 [Phytophthora parasitica CJ01A1] >ETP52944.1 hypothetical protein F442_02122 [Phytophthora parasitica P10297]) HSP 1 Score: 231.1 bits (588), Expect = 3.600e-57 Identity = 112/204 (54.90%), Postives = 160/204 (78.43%), Query Frame = 0 Query: 33 QEIKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQEDYTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWL 237 +EIKL + +RRKYEDLADL++I K TEHLEAA+ RDA+T E+YT AC+KLISQ+K+ E A+ + ++F++EY +DCPRA+ERL+R+GVPATV++ ++ + + +++ VA+TVQ+FIT MD ++L RAVDE+QP+L+++M+SLT V GLP DF K+E WL T+N+MRA + + EEQARQL FDL++ YSSF A+L Sbjct: 31 REIKLWADTKDRRKYEDLADLFAIFKTTEHLEAAYVRDAITPEEYTEACTKLISQYKTAETALRLGGFIDSVESFIAEYRLDCPRALERLVRIGVPATVVH-NTTNRKTDSVNVAQTVQNFITLMDVLKLNIRAVDEIQPLLSEMMSSLTMVSGLPPDFAGRDKIEGWLRTMNSMRASEELDEEQARQLSFDLERAYSSFMAFL 233
BLAST of NO19G02030 vs. NCBI_GenBank
Match: XP_024576489.1 (nuclear lim factor interactor-interacting protein hyphal [Plasmopara halstedii] >CEG40120.1 nuclear lim factor interactor-interacting protein hyphal [Plasmopara halstedii]) HSP 1 Score: 227.6 bits (579), Expect = 4.000e-56 Identity = 110/202 (54.46%), Postives = 157/202 (77.72%), Query Frame = 0 Query: 35 IKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQEDYTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWL 237 ++L ++ +RRKYEDLADL++I K TEHLEAA+ RDA+T E+YT AC+KLISQFK+ E A+ + ++F++EY +DCPRA ERL+R+GVPATV++ ++ + + +++ VA+TVQ+FIT MD ++L RAVDE+QP+L+++M+SLT V GLP DF K+E WL T+NAMRA D + EEQ RQL +DL++ YSSF A+L Sbjct: 380 MRLWVDSKDRRKYEDLADLFAIFKTTEHLEAAYVRDAITPEEYTEACTKLISQFKTAETALRLGGFIESVESFVAEYKLDCPRAFERLVRIGVPATVVH-NTTNRKTDSVNVAQTVQNFITLMDVLKLNIRAVDEIQPLLSEMMSSLTMVSGLPPDFAGRDKIEGWLRTMNAMRASDELNEEQTRQLSYDLERAYSSFMAFL 580
BLAST of NO19G02030 vs. NCBI_GenBank
Match: KUF79361.1 (CTD small phosphatase protein 2 [Phytophthora nicotianae]) HSP 1 Score: 224.2 bits (570), Expect = 4.400e-55 Identity = 112/208 (53.85%), Postives = 159/208 (76.44%), Query Frame = 0 Query: 34 EIKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQED-----YTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWL 237 EIKL + +RRKYEDLADL++I K TEHLEAA+ RDA+T E+ YT AC+KLISQ+K+ E A+ + ++F++EY +DCPRA+ERL+R+GVPATV++ ++ + + +++ VA+TVQ+FIT MD ++L RAVDE+QP+L+++M+SLT V GLP DF K+E WL T+N+MRA + + EEQARQL FDL++ YSSF A+L Sbjct: 425 EIKLWADTKDRRKYEDLADLFAIFKTTEHLEAAYVRDAITPEEVESFKYTEACTKLISQYKTAETALRLGGFIDSVESFIAEYRLDCPRALERLVRIGVPATVMH-NTTNRKTDSVNVAQTVQNFITLMDVLKLNIRAVDEIQPLLSEMMSSLTMVSGLPPDFAGRDKIEGWLRTMNSMRASEELDEEQARQLSFDLERAYSSFMAFL 631
BLAST of NO19G02030 vs. NCBI_GenBank
Match: XP_008875071.1 (hypothetical protein H310_10452, partial [Aphanomyces invadans] >ETV96279.1 hypothetical protein H310_10452, partial [Aphanomyces invadans]) HSP 1 Score: 223.8 bits (569), Expect = 5.800e-55 Identity = 112/211 (53.08%), Postives = 153/211 (72.51%), Query Frame = 0 Query: 26 SPPPSLKQEIKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQEDYTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWL 237 S PPS E+KL +A +RR YED++DLY+IIK TEHLE A+ RDA++ E+YT AC+KLISQ+K+ E A+ A + AF++ Y +DCPRAVERL+RLGVPATV++ ++ +A+ VA+TVQHFIT D +++ RAVDE+QP+L++ M S+T+V GLP F KLE WL LNAMRA D + + Q RQL FDL+Q Y+ F ++L Sbjct: 52 SKPPS---EVKLFESAKDRRMYEDMSDLYAIIKTTEHLETAYVRDAISPEEYTEACTKLISQYKTAETALRNAGHLVSIDAFLAHYRLDCPRAVERLVRLGVPATVVH-NTTSTNADAVNVAQTVQHFITLSDALKMNIRAVDEVQPLLSESMASITKVKGLPPTFDGLLKLEQWLRVLNAMRASDELDDNQTRQLSFDLEQAYTGFMSFL 258
BLAST of NO19G02030 vs. NCBI_GenBank
Match: XP_009828550.1 (hypothetical protein H257_05384 [Aphanomyces astaci] >ETV81813.1 hypothetical protein H257_05384 [Aphanomyces astaci]) HSP 1 Score: 223.0 bits (567), Expect = 9.900e-55 Identity = 112/209 (53.59%), Postives = 153/209 (73.21%), Query Frame = 0 Query: 28 PPSLKQEIKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQEDYTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWL 237 PPS ++KL +A +RR YED++DLY+IIK TEHLE A+ RDA++ ++YT AC+KLISQ+K+ E A+ A + AF+S Y +DCPRAVERL+RLGVPATV++ ++ +A+ VA+TVQHFIT D +++ RAVDE+QP+L++ M SLT+V GLP F KLE WL LNAMRA D + E+Q RQL FDL+Q Y+ F ++L Sbjct: 50 PPS---DVKLFESAKDRRMYEDMSDLYAIIKTTEHLETAYVRDAISPDEYTEACTKLISQYKTAETALRNAGHLVSIDAFLSHYRLDCPRAVERLVRLGVPATVVHNTTSTS-VDAVNVAQTVQHFITLSDALKMNIRAVDEVQPLLSESMGSLTKVKGLPPTFDGLMKLEQWLRVLNAMRASDELDEDQTRQLSFDLEQAYTGFMSFL 254
BLAST of NO19G02030 vs. NCBI_GenBank
Match: XP_008611312.1 (hypothetical protein SDRG_07268 [Saprolegnia diclina VS20] >EQC35028.1 hypothetical protein SDRG_07268 [Saprolegnia diclina VS20]) HSP 1 Score: 221.9 bits (564), Expect = 2.200e-54 Identity = 112/217 (51.61%), Postives = 155/217 (71.43%), Query Frame = 0 Query: 20 SKFDAPSPPPSLKQEIKLINNAAERRKYEDLADLYSIIKATEHLEAAFARDAVTQEDYTAACSKLISQFKSTEAAVLAAKTVADTQAFMSEYHMDCPRAVERLLRLGVPATVINPSSDDGRGEAIKVAETVQHFITAMDGVRLEQRAVDELQPMLTDIMTSLTRVPGLPTDFVASKKLEDWLVTLNAMRAMDSITEEQARQLLFDLDQGYSSFHAWL 237 S APS PP+ EIKL + ERR YEDL+DLY+IIK TEHLE A+ RDA++ + YT AC+KLISQ+K+TE A+ A + +F++ Y +DCPRA+ERL+RLGVPATV++ ++ + + VA+TVQH IT D ++L RAVDE+QP+L++ M+SL++V GLP F KLE WL LNAMRA D + ++Q RQ+ FDL++ Y+ F A+L Sbjct: 32 SAASAPSGPPAKVGEIKLWDTPKERRMYEDLSDLYAIIKTTEHLETAYVRDAISPDAYTEACTKLISQYKTTETALRNAGHLVSIDSFLTHYRLDCPRAIERLVRLGVPATVVH-NTTSSSSDTVNVAQTVQHCITLSDYLKLNVRAVDEIQPLLSECMSSLSKVNGLPPTFEGRLKLEQWLRVLNAMRASDELDDDQIRQMSFDLERAYTGFMAFL 247 The following BLAST results are available for this feature:
BLAST of NO19G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02030 ID=NO19G02030|Name=NO19G02030|organism=Nannochloropsis oceanica|type=gene|length=2086bpback to top protein sequence of NO19G02030.1 >NO19G02030.1-protein ID=NO19G02030.1-protein|Name=NO19G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=241bpback to top Synonyms
Publications
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