NO19G01920, NO19G01920 (gene) Nannochloropsis oceanica

Overview
NameNO19G01920
Unique NameNO19G01920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5936
Alignment locationchr19:565372..571307 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein pelota homolog
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:565372..571307 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0071025RNA surveillance
GO:0070481nuclear-transcribed mRNA catabolic process, non-stop decay
GO:0070966nuclear-transcribed mRNA catabolic process, no-go decay
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR038069Pelota/DOM34_N
IPR029064L30e-like
IPR004405Transl-rel_pelota
IPR005142eRF1_3
IPR005141eRF1_2
IPR005140eRF1_1_Pelota
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0004518nuclease activity
Homology
BLAST of NO19G01920 vs. NCBI_GenBank
Match: CBJ25660.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 441.8 bits (1135), Expect = 2.500e-120
Identity = 219/412 (53.16%), Postives = 299/412 (72.57%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNVAHDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPLEIEMEEEDLPLEEGGKGSSSNGVCGGGXRGSNKDGDVGDFYS 413
            MK++ R +S KDG+G V ++ EE EDMW  YNLI++GD        +VV ES+TGSTTS ++RL+LTI VERV FD D+C+LRLSGRN EE+ HVK+GAYHTLDLEL + F+I+K  WD + L+R++ + DP K+AEVAA+VM  GLA++CL+T  MT+ R RI+M+IP+KRAG+  H KA+ +FY A Y+A++RH+NF  +K +LL SPGFV  DFF F+N EA  +E++ L++NK+KFVL H+SSGHKHA+EE+L+QP +Q RL+DTKA  E++AL  F+ ML   PDRA+YG+NHVS A E  AV+ LL++D +FR  D   R+++V LVE+ K +G +   FSS+HVTGE+L QL G+AAVLRFPL    E++D       + S  + V G G     +D D G+  S
Sbjct:    1 MKVLRRQISSKDGDGFVQMKTEEAEDMWHAYNLIADGD--------RVVNESSTGSTTSKRVRLSLTIAVERVDFDSDSCLLRLSGRNSEENPHVKIGAYHTLDLELNQVFSIEKDVWDLIHLERIETSSDPTKKAEVAAVVMTGGLAHVCLVTSHMTVTRARIEMNIPRKRAGSSDHQKAISRFYEAVYQAIVRHVNFQQIKCLLLGSPGFVKDDFFEFLNLEAVRREERVLIENKSKFVLVHASSGHKHAVEEILSQPAVQTRLADTKASEEIRALATFFDMLKKDPDRAYYGYNHVSRANEELAVDSLLVTDGLFRSSDLQTRKKYVGLVEAAKDRGAKVFVFSSMHVTGEQLGQLTGIAAVLRFPLPEIAEDDD-------ESSDEDSVIGEG-----RDMDAGEVKS 392          
BLAST of NO19G01920 vs. NCBI_GenBank
Match: XP_024585445.1 (mrna surveillance protein pelota [Plasmopara halstedii] >CEG49076.1 mrna surveillance protein pelota [Plasmopara halstedii])

HSP 1 Score: 440.3 bits (1131), Expect = 7.400e-120
Identity = 206/370 (55.68%), Postives = 281/370 (75.95%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNVAHDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPL 371
            +KL+ + +S KD  G V+LR EEPEDMW IYNLI   DLV+TTT RKVVKE  TGST+S ++R+ L I+VE+V FDP  CVLR+ G+N  ES+HV++GAYHTLDLE+ R+FT+ K CWD + L+R++ ACD  KQAE+AA+VMQ GLA++CL+ G MT++R RI++S+PKKR GN AH K +++FY     ++ +HI+F LVK V+LASPGFV  +F+ FM   A   +DK +L+NK KFVLCHSSSGHKHAL+EVL+ P IQ+ ++DTKAV +V+ L  F+ ML    DRA+YG+ HV  A  + A+E L++SD++FR +D   RR++V++VESV+  GG    FSS+HV+GEKL Q+ G+AA+LRFP+
Sbjct:    9 IKLLKKQISEKDSAGFVILRAEEPEDMWHIYNLIHVSDLVKTTTIRKVVKEGVTGSTSSQRVRMTLQIEVEQVNFDPALCVLRIKGKNIMESQHVRLGAYHTLDLEMNRDFTLTKNCWDVMSLERINIACDVTKQAELAAVVMQSGLAHLCLIKGDMTVIRARIEISVPKKRPGNSAHAKGIERFYENIVRSIRQHIDFKLVKCVILASPGFVKDNFYKFMLEHAVRHDDKIILENKQKFVLCHSSSGHKHALDEVLSDPSIQSHVADTKAVEDVKCLEQFFNMLHIDQDRAYYGYKHVIRANSNMAIETLMISDALFRSQDIATRRKYVEIVESVRDNGGTVRLFSSMHVSGEKLGQVSGIAAILRFPM 378          
BLAST of NO19G01920 vs. NCBI_GenBank
Match: XP_002294291.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88646.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 438.3 bits (1126), Expect = 2.800e-119
Identity = 203/379 (53.56%), Postives = 281/379 (74.14%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNVAHDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPLEIEMEEEDL 380
            MKL+ + +S KDG G + L P  PED+W  YNL+  GDLVR TT RKV KES+TGS TS+K+R+NLTI+V +V+FD DT  +R+SG NR ESEHV+MGA+HTL LEL R F+I+K CWD + LDR++EAC+P K AEVA +VM  GLA++CL+TGS+T+ + RI+++IPKKR G+  H KAL KFY A Y A++ H+ F  +K VLL SPGF   DFF ++ AE+  +ED+PL++NK KFVLCHSSSGHKHA+EE+ + P I +R+++TK   E++ L  F  +L   PD+A+YG+ HV  A +  A++ LL+SD +FR  D + R+++V LVESV+ +GG    FS++HV+G++L Q+ GVAA+LR+PL    E ED+
Sbjct:    1 MKLLKKQISSKDGSGFISLLPSTPEDLWHTYNLLQNGDLVRCTTLRKVSKESSTGSVTSNKVRMNLTIEVTKVEFDRDTLQVRISGPNRAESEHVRMGAFHTLTLELDRQFSIEKLCWDQIYLDRIEEACNPEKGAEVACVVMSGGLAHVCLVTGSVTVTKARIEVTIPKKRTGSSGHAKALTKFYDAIYRAVLMHVPFDKIKCVLLGSPGFQKDDFFKYLLAESVRREDRPLIENKGKFVLCHSSSGHKHAIEEMFSDPNIMSRVTETKLSREIEVLNKFMRLLDTNPDKAYYGYFHVQKANDELAIDSLLISDELFRSSDVVTRKKYVSLVESVRDRGGTVYVFSTMHVSGQQLQQVSGVAAILRYPLPDLEELEDI 379          
BLAST of NO19G01920 vs. NCBI_GenBank
Match: XP_023231017.1 (protein pelota-like isoform X2 [Centruroides sculpturatus])

HSP 1 Score: 434.9 bits (1117), Expect = 3.100e-118
Identity = 211/378 (55.82%), Postives = 282/378 (74.60%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNVA-HDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPLEIEMEEE 378
            MKL+ + +  KDG G V L  EEPEDMW  YNL++EGD +R +T RKV  ESATGST S+++R  LTI +E + FD   CVLR+ GRN  E+++VKMGAYHTLDLEL R FT+ K+CWD++ LDR+D ACDP + A++AA++M  GLA+ICL+T SMT++R +ID++IP+KR G  A HDK LQKF+ +  + ++RH+NF +VK VLLASPGFV   F+ +M A+A   + K LL+NK+KFVL HSSSG KH+L+E+L  P +  +L+DTKA GEV+AL  FY ML  +P+RA YGFNHV  A E  A+E LL+SD++FR +D   R+++V LV+SVK  GG    FSSLHV+GE+L  L G+AA+LRFP+  E+EEE
Sbjct:    1 MKLLGKIIE-KDGSGHVTLVAEEPEDMWHAYNLVAEGDSLRASTIRKVTTESATGSTGSNRVRTTLTIAIENIDFDTQACVLRVKGRNIVENQYVKMGAYHTLDLELNRKFTLAKSCWDSIALDRIDMACDPAQHADLAAVIMHEGLAHICLVTSSMTLIRAKIDVNIPRKRKGQCAQHDKGLQKFFESVMQGILRHVNFDIVKCVLLASPGFVKDQFYEYMFAQAVKLDQKVLLENKSKFVLMHSSSGFKHSLKEILADPAVAVKLADTKAAGEVKALESFYTMLQNEPNRAFYGFNHVQKANEGQAIETLLISDNLFRCQDVAKRKQYVTLVDSVKDNGGDVKLFSSLHVSGEQLGLLTGIAAILRFPMP-ELEEE 376          
BLAST of NO19G01920 vs. NCBI_GenBank
Match: XP_018579916.1 (protein pelota [Anoplophora glabripennis])

HSP 1 Score: 434.1 bits (1115), Expect = 5.300e-118
Identity = 215/380 (56.58%), Postives = 284/380 (74.74%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNV-AHDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPL-EIEMEEED 379
            MKLV R++  K+GEG +VL PEEPEDMW  YNLISEGD VR+TT RKV  ESATGS++S+++R  LTI VE + FD   C+LRL GRN EE+++VKMGAYHTLDLEL R F+++K  WD++ L+R+D ACDP K A+VAA++MQ GLA++CL+T SMT++R +ID+SIP+KR G V  H+K L KFY    +A++RH+NF +VK VL+ASPGFV   F+ +M   A   ++K LL NK+KF+L HSSSG KH+L+EVL  P + A++SDTKA GEV+AL  FY ML  +P RA YG  H+  A E  A+E LL+SD++FR +D   R+ +V +VES +  GG    FSSLH++GE+L QL GVAA+LRFP+ E+E EE D
Sbjct:    1 MKLVERNMD-KEGEGHIVLIPEEPEDMWHAYNLISEGDSVRSTTIRKVQTESATGSSSSNRVRTTLTISVENIDFDTQACMLRLKGRNIEENQYVKMGAYHTLDLELNRKFSLRKQYWDSISLERIDTACDPTKTADVAAVIMQEGLAHVCLITPSMTLIRAKIDVSIPRKRKGFVQQHEKGLNKFYDNVMQAILRHVNFDIVKCVLIASPGFVRDQFYEYMFQTAVKTDNKVLLDNKSKFMLIHSSSGFKHSLKEVLQDPAVMAKISDTKAAGEVKALETFYTMLQCEPARAFYGKKHIEKANEAQAIETLLISDNLFRCQDVNLRKEYVRIVESAREYGGDVKIFSSLHISGEQLEQLTGVAAILRFPMPELEDEESD 379          
BLAST of NO19G01920 vs. NCBI_GenBank
Match: XP_023305431.1 (protein pelota [Lucilia cuprina] >KNC31105.1 Protein pelota [Lucilia cuprina])

HSP 1 Score: 433.0 bits (1112), Expect = 1.200e-117
Identity = 213/393 (54.20%), Postives = 296/393 (75.32%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNV-AHDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPL-EIEMEEEDLPLEEGGKGSSSN 392
            MKLVS+++  K G+G+V+L PEE EDMW  YNLISEGD VR+TT RKV  E+ATGS+TSS++R  LTI VE + FD   CVLRL GRN EE+++VKMGAYHTLDLEL R F ++K  WD++ L+R+D ACDP + A+VAA+VMQ GLA++CL+T SMT+VR +I+++IP+KR GN+  H+K L KFY +  + ++RH+NF +VK VL+ASPGFV   FF +M  +A   ++K LL NK+KF+L HSSSG KHAL+EVL +P + +++SDTKA GEV+AL  FY ML  +P +A YG  H+ +AA++ A+E LL+SD++FR +D   R+ +V LVE+V+  GG    FSS+H++GE+L QL G+AA+LRFP+ E+E + +D    EG  G++ +
Sbjct:    1 MKLVSKNMD-KGGQGSVILIPEESEDMWHAYNLISEGDSVRSTTIRKVQNETATGSSTSSRVRTTLTITVESIDFDTQACVLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDSIALERIDMACDPTQSADVAAVVMQEGLAHVCLITPSMTLVRSKIEVNIPRKRKGNIQQHEKGLAKFYESVMQGILRHVNFEVVKCVLIASPGFVRDQFFEYMYQQAVKTDNKVLLDNKSKFMLVHSSSGFKHALKEVLQEPAVMSKISDTKAAGEVKALEQFYTMLQCEPAKAFYGKKHILMAADNMAIETLLISDNLFRCQDVQQRKEYVQLVENVRDAGGDVKIFSSMHISGEQLAQLTGIAALLRFPMPELEEDSDD----EGDNGAADS 388          
BLAST of NO19G01920 vs. NCBI_GenBank
Match: XP_019618090.1 (PREDICTED: protein pelota-like [Branchiostoma belcheri])

HSP 1 Score: 433.0 bits (1112), Expect = 1.200e-117
Identity = 211/379 (55.67%), Postives = 283/379 (74.67%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNV-AHDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPLEIEMEEED 379
            MKL+ R    KDG G V L PE+PEDMW  +NL++ GD +R+TT RKV  ESATGS +SSKIR  LT+ +E + FD   CVLR+ GRN +E+++VKMGAYHTLDLEL R FT+ K CWD + +DR+++ACD  K+A+VAA+VMQ GLA++CLLTGSMT+VR +I+ +IP+KR G+   HDK L +FY +  +A++RH+NF +VK VL+ASPGFV   +  +M ++A   + K + +NK+KF+L HSSSG KH+L+EVL  P + A+L+DTKA GEV++L  FY ML  +PDRA+YG  HV  A+E +A+E LL+SD +FR +D   RRR+V LVE VK  GG    FSSLHV+GE+L QL GVAA+LRFP+  E++EED
Sbjct:    1 MKLIDRSFD-KDGSGQVTLLPEDPEDMWHAFNLVAVGDSLRSTTIRKVQNESATGSVSSSKIRTTLTVNIETIDFDTQACVLRVKGRNIQENQYVKMGAYHTLDLELNRKFTLAKECWDAIAIDRIEQACDIEKKADVAALVMQEGLAHLCLLTGSMTVVRAKIETNIPRKRRGSCEQHDKGLGRFYESVMQAILRHVNFEIVKCVLVASPGFVKDQYCEYMFSQAIKTDCKVITENKSKFLLVHSSSGFKHSLKEVLQDPSVAAKLADTKAAGEVKSLEQFYIMLQHEPDRAYYGIKHVESASESEAIETLLISDRLFRAQDVATRRRYVALVEKVKDLGGDVKIFSSLHVSGEQLDQLTGVAAILRFPIP-EIDEED 377          
BLAST of NO19G01920 vs. NCBI_GenBank
Match: XP_002611849.1 (hypothetical protein BRAFLDRAFT_123358 [Branchiostoma floridae] >EEN67858.1 hypothetical protein BRAFLDRAFT_123358 [Branchiostoma floridae])

HSP 1 Score: 432.6 bits (1111), Expect = 1.500e-117
Identity = 211/379 (55.67%), Postives = 283/379 (74.67%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNV-AHDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPLEIEMEEED 379
            MKL+ R    KDG G V L PE+PEDMW  +NL++ GD +R+TT RKV  ESATGS +SSKIR  LT+ +E + FD   CVLR+ GRN +E+++VKMGAYHTLDLEL R FT+ K CWD + +DR+++ACD  K+A+VAA+VMQ GLA++CL+TGSMT+VR +I+ +IP+KR G+   HDK L +FY +  +A++RH+NF +VK VL+ASPGFV   F  +M ++A   + K + +NK+KF+L HSSSG KH+L+EVL  P + A+L+DTKA GEV++L  FY ML  +PDRA+YG  HV  A+E +A+E LL+SD +FR +D   RRR+V LVE VK  GG    FSSLHV+GE+L QL GVAA+LRFP+  E++EED
Sbjct:    1 MKLIDRSFD-KDGSGQVTLLPEDPEDMWHAFNLVAVGDSLRSTTIRKVQNESATGSVSSSKIRTTLTVTIETIDFDTQACVLRVKGRNIQENQYVKMGAYHTLDLELNRKFTLAKECWDAIAIDRIEQACDIEKKADVAALVMQEGLAHLCLVTGSMTVVRAKIETNIPRKRRGSCEQHDKGLGRFYESVMQAILRHVNFEIVKCVLVASPGFVKDQFCEYMFSQAIKTDCKVITENKSKFLLVHSSSGFKHSLKEVLQDPSVTAKLADTKAAGEVKSLEQFYIMLQHEPDRAYYGIKHVESASESEAIETLLISDRLFRAQDVATRRRYVALVEKVKDLGGDVKIFSSLHVSGEQLDQLTGVAAILRFPIP-EIDEED 377          
BLAST of NO19G01920 vs. NCBI_GenBank
Match: XP_009824014.1 (mRNA surveillance protein pelota [Aphanomyces astaci] >ETV87215.1 mRNA surveillance protein pelota [Aphanomyces astaci])

HSP 1 Score: 431.0 bits (1107), Expect = 4.500e-117
Identity = 204/378 (53.97%), Postives = 284/378 (75.13%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNVAHDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPLEIEMEEED 379
            MKL+ +++S KDG G+V LR EEPEDMW ++NLI +GD ++TTT RKVVKE ATGST+S ++R++L ++++++ FDP  C+LR+ G N EE+ HV+MGA HT DLEL ++FT++K CWD + ++R++ AC+  KQA+VAA+VMQ GLA++CL+TG MT++R +I+ SIP+KR GN +H K +++FY    ++L RHI+F LVK VL+ASPGFV  DFF +M   A   +DK LL+NKA+F+L H+SSGHKHAL+EVL    ++ +L DTKA G+V+ L  F+ ML    DRA+YG+NHV  A + +AVE LL++DS+FR +D   RR++V LVE V+  GG    FSSLHV+GEKL QL GVAA+LR PL    +E D
Sbjct:    1 MKLLKKNISEKDGTGSVSLRAEEPEDMWHVFNLIHKGDTLKTTTVRKVVKEGATGSTSSQRMRMSLALEIDKIDFDPAKCLLRIKGVNVEENPHVRMGASHTTDLELNKDFTLKKNCWDLMSIERIETACNVAKQADVAAVVMQTGLAHLCLITGHMTVIRAKIESSIPRKRPGNTSHAKGVERFYDNIVQSLKRHIDFNLVKCVLVASPGFVKDDFFKYMLEYAVRTDDKVLLENKARFILVHASSGHKHALDEVLADAKVKVQLEDTKAAGDVKCLDTFFEMLHTDQDRAYYGYNHVVRANDQNAVETLLIADSLFRSQDVQTRRKYVTLVEKVRDNGGVVRVFSSLHVSGEKLGQLSGVAAILRMPLPDLDDEGD 378          
BLAST of NO19G01920 vs. NCBI_GenBank
Match: XP_008865666.1 (mRNA surveillance protein pelota [Aphanomyces invadans] >XP_008865667.1 mRNA surveillance protein pelota, variant 1 [Aphanomyces invadans] >ETW05889.1 mRNA surveillance protein pelota [Aphanomyces invadans] >ETW05890.1 mRNA surveillance protein pelota, variant 1 [Aphanomyces invadans])

HSP 1 Score: 431.0 bits (1107), Expect = 4.500e-117
Identity = 203/377 (53.85%), Postives = 285/377 (75.60%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANICLLTGSMTIVRQRIDMSIPKKRAGNVAHDKALQKFYRATYEALIRHINFGLVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHKHALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVSVAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLHVTGEKLHQLGGVAAVLRFPLEIEMEEE 378
            MKL+ R++S KDG G+V LR EEPEDMW ++NLI +GD+++TTT RKVVKE ATGST+S ++R++L ++++ + FDP  C+LR+ G N EE+ HV+MGA HT DLEL ++FT++K CWD + ++R++ AC+  KQA+VAA+VMQ GLA++CL+T  MT++R +I+ SIP+KR GN +H K +++FY    ++L RHI+F LVK VLLASPGFV  DF  +M   A   +DK +L+NKA+F+L H+SSGHKHAL+EVL    ++ +L DTKA G+V+ L  F+ ML +  DRA+YG+NHV  A + +AVE LL++DS+FR +D   RR++V LVE V+  GG    FSSLHV+GEKL QL G+AA+LR PL  E+EE+
Sbjct:    1 MKLLKRNISEKDGTGSVTLRAEEPEDMWHVFNLIHKGDVLKTTTVRKVVKEGATGSTSSQRLRMSLALEIDHIDFDPAKCLLRIKGINVEENPHVRMGASHTTDLELNKDFTLKKNCWDLMSIERIETACNVAKQADVAAVVMQTGLAHLCLITSHMTVIRAKIESSIPRKRPGNTSHAKGVERFYDNIVQSLKRHIDFNLVKCVLLASPGFVKDDFLKYMLDYAIRTDDKVILENKARFILVHASSGHKHALDEVLADQKVKVQLEDTKAAGDVKCLDTFFEMLHSDQDRAYYGYNHVVRANDQNAVETLLIADSLFRSQDVQTRRKYVTLVEKVRENGGLVRVFSSLHVSGEKLAQLSGIAAILRMPLP-ELEED 376          
The following BLAST results are available for this feature:
BLAST of NO19G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ25660.12.500e-12053.16conserved unknown protein [Ectocarpus siliculosus][more]
XP_024585445.17.400e-12055.68mrna surveillance protein pelota [Plasmopara halst... [more]
XP_002294291.12.800e-11953.56predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_023231017.13.100e-11855.82protein pelota-like isoform X2 [Centruroides sculp... [more]
XP_018579916.15.300e-11856.58protein pelota [Anoplophora glabripennis][more]
XP_023305431.11.200e-11754.20protein pelota [Lucilia cuprina] >KNC31105.1 Prote... [more]
XP_019618090.11.200e-11755.67PREDICTED: protein pelota-like [Branchiostoma belc... [more]
XP_002611849.11.500e-11755.67hypothetical protein BRAFLDRAFT_123358 [Branchiost... [more]
XP_009824014.14.500e-11753.97mRNA surveillance protein pelota [Aphanomyces asta... [more]
XP_008865666.14.500e-11753.85mRNA surveillance protein pelota [Aphanomyces inva... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01920.1NO19G01920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632367gene_7595Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01920.1NO19G01920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01920 ID=NO19G01920|Name=NO19G01920|organism=Nannochloropsis oceanica|type=gene|length=5936bp
ACAGATCTTCATTTAATTTCTCTGTTTTGTATTCTTTATCGTCCATCCGC
GTAGTGATGATAAAAATCAAGCATTTGAGGAGTAATTTGTCGCTGCCAGC
CCGTCAAGACCTGGTCAAGGTGCCGACCTTGCAGCGAGTGGGCATTCACC
GGGTCTTCCTCTATCGCACAGAGAGCAGCTTCTCGACACAAAGCCACCAT
CTCTGCCCCCGAGAACCCCTCCGTGCGCCGCGCGATTTCATTCAAGTTCA
ACATTTCACCGCAAATCGCCTCTCCATCCCTTTCTCCACCCGTGTACTCC
CCAGGCATACCGCGCAACGCAATGCGAAGAATTTCGAAGCGGGAAGCCGT
GTCGGGCGGTGGCACGTAGACCTTGCGGTCAATGCGGCCGGGCCGAAGCA
GGGCTGGATCCAGCAAGTCGGGGCGATTGGTAGCTGCCACCACCACCACG
CGCCGTAAAGGCTGCACGCCATCCAGCTCTGTCAGCAACTGGCTCAACAC
CCTTTCTGAGGCCTTGGAGTCTTCGCCCTCACCCCGCCGCCCCGCCAGCG
CATCCACCTCATCGAAAAATATAACTGTGGGCGCAGCCGCCCGCGCTTTT
TTAAAGAGTGCCTTCAGGGCCTTCTCGCTCTCGCCCAGCCATTTGCTGAG
GAGCTCTGGTCCCTTGACGGCCAAGAAATTCATACCGGACTCGGTGGCAA
GGGCGCGGGCCATTAGCGTTTTGCTACAACCTGGCGGTCCGTAGAGAAGC
ACTCCCTTGGGTGGGGGGATGCCCATGCGCACGAATGCTTCAGGTCGAGT
GAGCGGCCATTCCACGCACTCCTGCAACGCACGCTTCACCTCACTCATGC
CCCCAATATCCCCCCAGCGCACCCGCGGCACCTCCACCGCTACTTCCCGA
AGTGCGCTTGGTCGGACTCGGGCTAGGCCCGCCAGCAAGTCCTCGCCTGT
CACCTGCACATTGCCCTCTTGGACCCCACCCTCTTCTACGCGAGTTGACT
GTTTTACTACTCGTCTCGCTGCAAGCATGGCTGCTTCCTTGCATACAAGC
AACAGGTCTGCGCCCACAAACCCATGTGCGCGACTAGCCACCCGCTGCAT
GTCTTCCTCCGAGACTTTCATGATTGTGGGGCCTGCCTGTCGGAGCAGCA
CCTTGAGGATGTCTTTCCGTGCCGCCTCCCCGGGCACGCCTAGGTCGATC
TCTCGGTCCAGCCGACCTGGACGCCGCACTGCGGAGTCAAGTGCATGCGG
TCTGCTCGTGGCAGCGAGAACTACAACTCGCTCCATCCCCTGAAAGCCGT
CCAACAAGGCCAAGAAGGTGGCCACCATGCGTTTGTCTAGGTCTGAGGAA
GTAGCGTCTCGCCGTAAGCACAAGGCCTCCACCTCGTCGAGCACTATCAC
GGTGGGTGCCATTGCTTTCGCCTCTTGAAATGCCTGACGCAGCTTGGTCT
CTGTCTCTCCCACCAAGCGCCCCCCAAACTCTGGCCCGCCCAGTCGCATC
ACGTTGTAGCCTTTGCAATCAGCAAAATATTGAGCCGCCGCTCTGTATGT
TGAGGAGGGGGGTTGGAGGTGAAAAAAAGCATAAGAGAGACTTCCAACAA
GGAACTGTATTAGAATTGACACAAGAATAATCTTTCGTGGAACCAACAGT
TTTTCACATACCGGAGAAGTGTCGTCTTGCCCGTGCCACTGGGGCCGACC
ACCAAGAGACCCCGCGTCGGCCGCAACCCGTGCTGAGCAAAAACTTCCGG
AGATTCCAACGATTGCTCGACGCCCTCTCGTATCTCCTGAACAGCTATTT
GAAGCCCGCCCACTGTAGCCCAGCAAGCGTCTCCATTGTTCTGTGTGTCT
GTTGCCCTTTCAATTTTAGGCTTATCCTCTTCATAGACGTCTCTCTCGGA
TGCCCCTCTTGGAGGACGATTTACCACTCTCACCCTCGTGCGCCGCCCCA
CCTTGTACATAAGATTTGATATGGTGACATCATGACCCTCATTGGTGCTG
TCCTTGTCGGCGAGTGAAAGCGCTGTCAAGTCCGGGAGAGACACTCTTTT
GTCTACCTGATCTCCTTTGGATGAGGAAGTCTCCTCCAGTGCCGTTAGCT
CCACAACCTCAAAGGTGGCACGGGCAGCAAAGCTAGCAAAGGTCAGGCGC
AGGCCAGGATAAAGGAGGTGCCCTACCAATACGTCCTTTAGTCTTGCCTT
CCAAAGAACTGCAGTCGCACCTCTACTGCACGAATTTGTTGTTATTGTAT
TCCATCCCGTCTCATCCTCCATCCCCTCCTCTTGGTCTGGTGGTACGACG
CGCAGGGCCACCTCGGAGGCAGCGACTTGTCGCACCGACCTGAACAGCGC
ACGGATAGAGACATAACACTCCTGTCCAGCCTCTTTAATGCGGGGGTATT
GGCCCAAGATAAACGGGCCTGTCCCGGCCGCTACCCCGGATGGCCCACTG
CTTCCTGGCCAGGCCCTCAGTGCTACTAGTTGGGAGCATTTTAGTCCTCG
TCGCGGCGGAGTTTGGCATTCGGTGCCCGACGATGGAGAGGATGGTGTGG
AGGGCGAGGAATGAATTACGACCCAGTCGCCTGCCTTGACTCCCAGGCGC
CGACAGTCTAGTGGGGTCAGGAGCAGCCGATCGGGTGGGGAGGGCGACGA
TGCCGGGGCATGCAGAAGTAAAACATCGTCCAGCTGATCTGTCGGTTCTA
CGTCCTCATGCTGCTGCTGCCGCCGTTTCTTACTACCAGAAGACCACGGC
ATGGCCATCTGCCTTCCTCTACCTCCTGCAGATCATTTGCAAAGCGTATG
AGGTATGCCGATGTATGCAGTAATTTCCAGATATCAGAGGAAGGAAGTTG
GTTGCGGTTGTTGGTTGTCGTGTTTTAAAAGTAGCTTGAGGGACACCTGG
ATCGATTGAATGAGAGGCACAGACATGCGCTAGAGAGTGCAGACCTTCAC
GGATGCTGCAGAAGTCTGAAACGCCGCTCTCCCTGACCTTCACCGCTTCA
TTCCCCTCTGACCAAAGAAACTCACCTTTACCCGTGGGAGAGGGCGTCGA
AAGCCGATCACTAGTTCCGGACCCTGCTCCTCCTCCCTTTTTGGTTGACG
TCAATGGCATGTCCGAAGCGCGAGTTTCCTCCTGTATGTTTGAGTGATGT
GGTGGTAAGCGCATAACCGCGGTCTCGGCGGATTAACGTCCGCACCACCG
CCCCCTCGAGATCTGCCCATTTCAAGAAAGTTAAAGAAAGTTTCTTTTCA
CGACACAGCAACACTAAGAAGTAGCCCGCAAACGTGCGCGACAAGAGCCT
CCACACCAAGGCGACTTTCTCCGTACCTGACATGAAGCTGGTGAGCCGGG
ACGTGAGCGGGAAGGATGGAGAAGGAACGGTGGTATTGCGGCCCGAGGAA
CCCGAGGACATGTGGGCGATCTACAATTTAATAAGTGAGGGAGACCTGGT
GCGGACCACGACTTTCCGCAAGGTGGTCAAGGAAAGTGCCACGGGCTCAA
CGACCAGCAGCAAAATCCGCCTGAACCTAACCATCCAGGTGGAACGCGTG
CAGTTCGACCCAGACACGTGTGTCCTGCGCTTGAGTGGCCGGAATCGGGA
GGAATCGGAGCACGTCAAGgtaagaaaggagaatgacagaggtgcacgct
cacattttaaactttgtcctgcccgtccaatatctcagATGGGGGCATAC
CATACCTTGGATCTGGAGTTGCAGCGGAATTTTACCATCCAAAAGACCTG
CTGGGACACGGTGGTGCTCGACCGTTTGGACGAGGCTTGCGACCCTGTCA
AGCAGGCCGAAGTCGCTGCCATTGTTATGCAGCCCGGTCTGGCCAATATC
TGCCTTCTTACGGGCTCTATGACCATCGTGCGGCAACGGATCGATgtacg
tctccggtacttgctctttgactctgggttacggtctagtctgcttgttg
ctgttcaagccattggtggttggtggaacagttgccgggtatcattctcg
tcttttctttcgttatcatgattttcctgactcttcatttatctgggtcc
ccatcttctccttcaagctactgtcccccccacctgaatcttctctcatc
cccaacccttccctcagATGTCCATCCCGAAGAAGCGGGCCGGAAATGTT
GCCCACGACAAGGCTTTGCAGAAATTCTACCGCGCCACGTACGAGGCCCT
CATAAGACACATTAATTTCGGGTTGGTAAAGGCTGTGCTGTTGGCAAGTC
CTGGCTTCGTGAATTCAGACTTCTTTGCCTTCATGAACGCCGAGGCCCAG
CTGAAGGAGGACAAGCCGCTGCTGCAGAACAAAGCCAAATTTGTGCTCTG
CCACTCCTCTTCGGGCCACAAGCATGCGCTTGAAGAGGTACTGACACAAC
CCGGCATCCAGGCACGCTTGTCGGACACCAAGGCGGTGGGCGAGGTGCAG
GCTTTGGGGGACTTTTACGCCATGCTCTCGGCCCAGCCAGACCGCGCGCA
CTACGGCTTCAACCACGTGAGTGTAGCAGCCGAACATGACGCAGTGGAAA
TGTTGCTCATGAGCGACTCCATCTTCCGGGGCCGCGACTTCCTGGCGCGC
CGCCGCTTTGTGGACCTGGTGGAAAGCGTCAAGGCCAAAGGCGGCCGCTT
TCTGTGCTTCTCCAGCTTGCACGTAACCGGCGAGAAGTTGCATCAGCTGG
GCGGCGTGGCGGCGGTGCTGCGTTTTCCCTTAGAGATCGAAATGGAGGAA
GAGGACTTACCGCTGGAGGAGGGAGGTAAGGGAAGCAGCAGTAACGGCGT
TTGTGGCGGCGGCGGGAGAGGCTCAAACAAGGACGGAGATGTCGGGGACT
TCTACAGTGGGGAGCCCATAGAACAGCATGAGGATGAAGACAGAGAAGAG
CGCCACAGGGCTGTCGAAGAGGAGGGTATGGAGGCAATAAGAGAAGCCAC
TGACTTGGAAGGAATGGGCTTGTAAAAAGAATGAAATCTTTCACATACAT
ACTATTCTTTTGTTTTTGGTCAATTATTTCAATTTCGAGAATCACGCGAA
GGCTTGATCAAACCAAACAACAGAGAAAAAAACATTTGTGCATATGACTG
CTCCATTCATCACTTCAGATGTTGCAACATAGGCACACACGCATGTTCCG
TTCTGTAATAAAAAATCTGTTAATACCTAGCTCCGTGATCTTTCTTTACT
CCTTCTTCTTCAAGGCCTCTAGCGGCACAGGTCCCTGCAGCGCCCGTCGC
CGAGCTTGCGCCTCCTGACGCTCCTCTTCTTCCAACCGAGCATTATCCTC
TTTCTCCTCTTCCTTGTAACGCTTCACTGCCACCACGAACGAGGCAACAA
AGCCAGGACCCGCAATCGCCACCACAGCGGTTGTGCCCATCAGCCCCAAA
AGTGGTTTGCCACCCGCGAGCTCCGCGAGCGATCCCGTGAAGCTGATTCC
CAGCATCATGGATAAGAAGAGGAAGCCGTAGGCCGGAAAGCGGAAGGGCC
GGTCGGGCTCTGGGCTGGTTGCTTTAGGACCCCCCAAACTTGGCAGCGGC
AGCCGGTCCACGGTGGTTTTTACGGCATCCCCGAACGCACTGCTTTGATT
CGCCTTTTCTGCCTCTTCAAACAGACGGTCCAGCTCCCGCTTCTCCGGCT
TGTCCTCGCCTTCAGCAGCACGCAGCGGTCCTAGCCTCCTACTCCTGCTG
CTGTAGCTGATGCAGCTGCTGCTGGTCTTGGTCCCGCAGTGGCTGCTCCT
CGACATAGCAGCGGTGCAAGACGTTCTCCAACTGCGGTAGATCGGGACAA
CAAACGCGTGACTCGAGGACAGGAGTAGAAGGGACAGCAGCAGCACAAGG
ATTTTCATCATGGGATGTGTGTGCTGGGTCTGCTAGGCAGCGTTCTAAAC
GGAAGTAGGGCGCACCGGCAAATCGGCAGGACCCTG
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protein sequence of NO19G01920.1

>NO19G01920.1-protein ID=NO19G01920.1-protein|Name=NO19G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=451bp
MKLVSRDVSGKDGEGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVK
ESATGSTTSSKIRLNLTIQVERVQFDPDTCVLRLSGRNREESEHVKMGAY
HTLDLELQRNFTIQKTCWDTVVLDRLDEACDPVKQAEVAAIVMQPGLANI
CLLTGSMTIVRQRIDMSIPKKRAGNVAHDKALQKFYRATYEALIRHINFG
LVKAVLLASPGFVNSDFFAFMNAEAQLKEDKPLLQNKAKFVLCHSSSGHK
HALEEVLTQPGIQARLSDTKAVGEVQALGDFYAMLSAQPDRAHYGFNHVS
VAAEHDAVEMLLMSDSIFRGRDFLARRRFVDLVESVKAKGGRFLCFSSLH
VTGEKLHQLGGVAAVLRFPLEIEMEEEDLPLEEGGKGSSSNGVCGGGGRG
SNKDGDVGDFYSGEPIEQHEDEDREERHRAVEEEGMEAIREATDLEGMGL
*
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Synonyms
Publications