NO19G01890, NO19G01890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01890 vs. NCBI_GenBank
Match: EWM23688.1 (transmembrane bax inhibitor motif-containing protein 4 [Nannochloropsis gaditana]) HSP 1 Score: 375.6 bits (963), Expect = 1.600e-100 Identity = 191/244 (78.28%), Postives = 209/244 (85.66%), Query Frame = 0 Query: 72 YPKAGGDEFYDPEAAQVAEHVPSSFMENTQGQIRLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFVLATPQLFTLALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLISWLTGWRSTFFYSLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLLGGSRRD 316 YP+ G +EFYDPEAAQ E PSSFM+ TQG+IRLALLRKVY+ILS+QLL TV V+CLF FNR +SDFVLATPQLFT+AL+LSFACLIGLFCFKQKHP N++LL FTLCQSFLVGLIC IYYRQG+GELVLQAFGITLAIFVGLTAYT YSDKDFSFLGGFC AGLIGL+VWGLISWLTGWR VYDTWLLSKRFGP++AI ASIMLYLD+INLFLFILQLLGG+RRD Sbjct: 113 YPR-GMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRXXXXXXXXXXXXXXXXXVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
BLAST of NO19G01890 vs. NCBI_GenBank
Match: OSX80822.1 (hypothetical protein BU14_0032s0079 [Porphyra umbilicalis]) HSP 1 Score: 183.0 bits (463), Expect = 1.500e-42 Identity = 110/261 (42.15%), Postives = 158/261 (60.54%), Query Frame = 0 Query: 70 QPYPKAGGDEFYDPEAAQVAEHVPSSFMENTQGQ--------IRLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFVLATPQLFTL-ALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLISWLTG----WRSTFFY--SLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLLGGSRRD 316 +P + G YDP ++ VA + + G +RL LRKVY+ILS+QL TV VA +F + SV FV+A T+ L+ + L L +K KHP N+ LL FT +S++VG +CAIY QG G+LVL+AF +T+ +FV LT Y + S +DFSFLGGF AGLI ++ +++ L G STF + S+ GALLF+ I+YDT ++ + GP++ IA++ LYLD+INLF++ILQ+L R D Sbjct: 10 EPASGSSGKTHYDPVSSSVAAGAATGMDDFDYGTSVGTSDKFVRLQFLRKVYTILSMQLALTVAVAAVFMLSDSVRHFVIAANGPMTIVGLIATLGFLFALMAYKDKHPLNLYLLAGFTAAESYMVGTVCAIYQEQGIGDLVLEAFALTMLVFVSLTIYCFVSKRDFSFLGGFLFAGLIIMVGASVLNLLLGLGGAQNSTFSFAISVAGALLFTGYILYDTSVIMNQLGPDEWAIAAVNLYLDLINLFMYILQILSRMRED 270
BLAST of NO19G01890 vs. NCBI_GenBank
Match: CBJ28269.1 (Homologue of a Golgi anti-apoptotic protein identified from vaccinia virus. Transmembrane BAX inhi [Ectocarpus siliculosus]) HSP 1 Score: 178.7 bits (452), Expect = 2.800e-41 Identity = 95/211 (45.02%), Postives = 139/211 (65.88%), Query Frame = 0 Query: 104 IRLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFVLATPQLFTLALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLISWLTGWRSTFFYSLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLLGGSRR 315 +RL +RKVY ILSIQLL T VA + N +V +L + S L+ L C++ K+P NM LL A+T +++ VG++CA Y QG G +V+QA G+T+A+F+GLT +T+ + DFSFLGG A + L++WG++ + G++ ++ YSLFGA++FS I+YDT LL G ++ I+ASI LYLDI+NLFL+IL+LL R Sbjct: 67 LRLGFIRKVYGILSIQLLLTAAVAAVCVLNDNVRTGILGNLWTVWVGFFFSIGLLLCLMCYRDKYPLNMYLLGAWTFVEAYTVGVVCAAYASQGQGTIVVQAAGLTMAVFLGLTLFTFQTKIDFSFLGGALFASIWVLMLWGVVMSVFGFQQSYLYSLFGAIIFSLYILYDTSLLMNHLGYDEYIVASISLYLDILNLFLYILRLLSRDNR 277
BLAST of NO19G01890 vs. NCBI_GenBank
Match: XP_005709020.1 (transmembrane BAX inhibitor motif containing 4 isoform 1 [Galdieria sulphuraria] >EME32500.1 transmembrane BAX inhibitor motif containing 4 isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 175.6 bits (444), Expect = 2.400e-40 Identity = 99/218 (45.41%), Postives = 138/218 (63.30%), Query Frame = 0 Query: 104 IRLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFVLATPQLFTLALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLISWLTGWRS------TFFYSLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLLGGSRRD 316 +RL +RKVY ILS+QL TV ++ LF N+S+S VL P L + L+ + L L +K +HP NM LL FT +SF+V ICA++ G G +V +AF +T +F LTAY +YS KDFSFLGGF AGL+ L +I+ L GW +F S+ G+LLF I++DT LL R P++ I+A+I LYLD+INLF+++LQ+L +RD Sbjct: 46 VRLGFIRKVYGILSLQLGFTVFLSSLFMLNQSISMVVLRNPWLLWIGLLATMGALFALVFYKNQHPKNMYLLGIFTFGESFMVATICALFRSAGLGVIVFEAFLLTALVFTSLTAYCFYSKKDFSFLGGFLWAGLLCLFGAAMINMLLGWTGNFSPGFSFLISVMGSLLFCGYILFDTSLLINRLSPDEYILAAISLYLDVINLFMYLLQILSYLQRD 263
BLAST of NO19G01890 vs. NCBI_GenBank
Match: KOO28781.1 (transmembrane bax inhibitor motif-containing protein 4-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 174.9 bits (442), Expect = 4.000e-40 Identity = 95/208 (45.67%), Postives = 137/208 (65.87%), Query Frame = 0 Query: 104 IRLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFVLATPQLFTLALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLISWL--TGWRSTFFYSLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLL 310 ++ +RKVYSIL++QLL T+ + LF F+ VL +P + A +L F L+ LFC+K KHP NM LL FTLC S+ VG++CA+YY+ G G +V QA +T A+FV LT YT+ + +DFSFLG + L LI+W +++ L G S ++L GALLF I++DT ++ GP+ I+A+I LYLD+INLFL++L+LL Sbjct: 14 VKAGFIRKVYSILALQLLMTMMGSALFMFHEPTRMLVLTSPNMMMTATLLPFGFLLALFCYKDKHPVNMALLGGFTLCMSYSVGVVCAVYYQTGYGIVVFQALILTSAVFVALTTYTFVTKRDFSFLGAGLFSALFILIIWSILNSLFDFGAGSRMVFALLGALLFCGYILFDTSMILHHCGPDDYIMAAIALYLDLINLFLYMLELL 221
BLAST of NO19G01890 vs. NCBI_GenBank
Match: XP_002293340.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89076.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 167.5 bits (423), Expect = 6.500e-38 Identity = 94/207 (45.41%), Postives = 131/207 (63.29%), Query Frame = 0 Query: 103 QIRLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFVLATPQLFTLALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLISWLTGWRSTFFYSLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLL 310 + R +RKVYSILS+QL+ T V+ + +VL TL++V S A ++ L C+K KHP NM LL FT+ ++FLVG Y G +VL+A +T AIF+GLT +T+ S DFSFLG GL LI+WGL + L G ++ + Y+L G +LFS I++DTWL+ R P + ++A+IMLYLDIIN FL++LQLL Sbjct: 1 ETRRLFIRKVYSILSVQLVLTGVVSTFMAMHVPTQIYVLTHGWPVTLSMVTSIALIVALMCYKDKHPENMYLLATFTIVEAFLVGTTTTAYCAAGYEGVVLEAVFLTGAIFIGLTLFTFQSKIDFSFLGAALSMGLGALILWGLFAMLFGVQTGYAYALIGCILFSGYILFDTWLIMDRLSPSEYVLAAIMLYLDIINFFLYLLQLL 207
BLAST of NO19G01890 vs. NCBI_GenBank
Match: XP_005834884.1 (hypothetical protein GUITHDRAFT_69344 [Guillardia theta CCMP2712] >EKX47904.1 hypothetical protein GUITHDRAFT_69344 [Guillardia theta CCMP2712]) HSP 1 Score: 158.3 bits (399), Expect = 3.900e-35 Identity = 93/214 (43.46%), Postives = 125/214 (58.41%), Query Frame = 0 Query: 98 ENTQGQIRLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFVLATPQLFTLALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLISWLTGWRSTFFYSLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLLGG 312 E + Q++ L KVYSIL QLL T + LF F V+ FVL L L +++ +I L+ K +PWN +LL FTL F+VG+ CA Y G G + A +TL IFV LT + SD DFSFLG F LI L+VW L + + G++ + GALLFS I+YDTW++ + G + IIASI LYLD+INLF +L ++GG Sbjct: 32 ETVRKQVQKDFLIKVYSILCAQLLVTTLICALFVFAEPVTYFVLGNIWLTLLLFIVNLFVIIALWFLKNTYPWNYILLGVFTLSMGFMVGVTCAAYTVNGMGYNIAFAALLTLVIFVSLTVFVSVSDIDFSFLGLFLPVCLIVLLVWSLFAIIFGFQLGMLFGAIGALLFSGFIIYDTWMIMNKMGCDDYIIASIELYLDVINLFSMLLLVMGG 245
BLAST of NO19G01890 vs. NCBI_GenBank
Match: XP_005778836.1 (hypothetical protein EMIHUDRAFT_353880 [Emiliania huxleyi CCMP1516] >EOD26407.1 hypothetical protein EMIHUDRAFT_353880 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 156.4 bits (394), Expect = 1.500e-34 Identity = 95/217 (43.78%), Postives = 137/217 (63.13%), Query Frame = 0 Query: 105 RLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFV--LATPQLFTL--ALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLIS--WLTGWRSTFFYSLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLLGGSRRD 316 R A LRKVY+IL +QLLTT + + +D + + + +T+ A++ SF L GL C + + P NM++L AFTLC+S+++G IC++YY G G LVL+A +T IF GLT +T S DFS +G L+ LIVWGL + + ++ Y+L G +LFS IVYDT ++ K++ ++ I+ +I LYLDIINLFLFIL+LLG RD Sbjct: 92 RKAFLRKVYAILGVQLLTTTALVATMMM-KGGADLITWVQSEGRWTMWTAMIGSFVSLFGLQCVRHRTPHNMLVLGAFTLCESWMIGTICSMYYANGMGILVLEALALTSIIFAGLTVFTMQSKIDFSVMGPALFVSLLALIVWGLFARFFFASVVASQVYALCGVVLFSLFIVYDTHMVLKQYSYDEYIMGAIQLYLDIINLFLFILELLGIKPRD 307
BLAST of NO19G01890 vs. NCBI_GenBank
Match: XP_023254864.1 (protein lifeguard 4-like [Seriola lalandi dorsalis]) HSP 1 Score: 156.4 bits (394), Expect = 1.500e-34 Identity = 95/217 (43.78%), Postives = 137/217 (63.13%), Query Frame = 0 Query: 105 RLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFV--LATPQLFTL--ALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLIS--WLTGWRSTFFYSLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLLGGSRRD 316 R A LRKVY+IL +QLLTT + + +D + + + +T+ A++ SF L GL C + + P NM++L AFTLC+S+++G IC++YY G G LVL+A +T IF GLT +T S DFS +G L+ LIVWGL + + ++ Y+L G +LFS IVYDT ++ K++ ++ I+ +I LYLDIINLFLFIL+LLG RD Sbjct: 95 RKAFLRKVYAILGVQLLTTTALVATMMM-KGGADLITWVQSEGRWTMWTAMIGSFVSLFGLQCVRHRTPHNMLVLGAFTLCESWMIGTICSMYYANGMGILVLEALALTSIIFAGLTVFTMQSKIDFSVMGPALFVSLLALIVWGLFARFFFASVVASQVYALCGVVLFSLFIVYDTHMVLKQYSYDEYIMGAIQLYLDIINLFLFILELLGIKPRD 310
BLAST of NO19G01890 vs. NCBI_GenBank
Match: EJK76928.1 (hypothetical protein THAOC_01277 [Thalassiosira oceanica]) HSP 1 Score: 154.5 bits (389), Expect = 5.700e-34 Identity = 104/288 (36.11%), Postives = 161/288 (55.90%), Query Frame = 0 Query: 44 PAYQQQPQPATYSHHPHAQHQQQLPTQPYPKAGG---------DEFYDPEA----AQVAEHV-PSSFMENT--QGQIRLALLRKVYSILSIQLLTTVGVACLFCFNRSVSDFVLATPQLFTLALVLSFACLIGLFCFKQKHPWNMVLLVAFTLCQSFLVGLICAIYYRQGSGELVLQAFGITLAIFVGLTAYTYYSDKDFSFLGGFCMAGLIGLIVWGLISWLTGWRSTFFYSLFGALLFSALIVYDTWLLSKRFGPEQAIIASIMLYLDIINLFLFILQLLGGSRRD 316 P+ ++ PA + P A + LP PK+G D+ YD EA +AE V + MEN + R +++VY+IL+ QL+ T V+ + +VL L++ S ++ L C+K++ P NM LL FT ++FLVG + +Y G +VL+A +T IF+GLT +T S DFSF+G F GL LI+WG + + G ++ + Y+L G ++FS I++DTWL+ ++ P + ++A+IMLYLDIINLFL++LQLL S R+ Sbjct: 4 PSLHKEETPAESAGLPFA---EALPLND-PKSGAGPAKAYAVKDDRYDYEAQGGKPPMAETVGEAQVMENLGWDPRTRKLFIQRVYTILAAQLMLTFVVSAFMSLHAPTQAYVLTHGWPMGLSMAASIVSIVALMCYKEREPLNMYLLWIFTFAEAFLVGSVVTMYCAAGYQGIVLEAVLLTGLIFIGLTCFTCRSKIDFSFMGAFLSMGLGALILWGFFAMIFGAQTGYVYALLGCIIFSGYILFDTWLIMEKLSPHEHVLAAIMLYLDIINLFLYLLQLLAESNRN 287 The following BLAST results are available for this feature:
BLAST of NO19G01890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01890 ID=NO19G01890|Name=NO19G01890|organism=Nannochloropsis oceanica|type=gene|length=948bpback to top protein sequence of NO19G01890.1 >NO19G01890.1-protein ID=NO19G01890.1-protein|Name=NO19G01890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=316bpback to top Synonyms
Publications
|