NO19G01760, NO19G01760 (gene) Nannochloropsis oceanica

Overview
NameNO19G01760
Unique NameNO19G01760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1277
Alignment locationchr19:529254..530530 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:529254..530530 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01760.1NO19G01760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01760.1NO19G01760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01760 ID=NO19G01760|Name=NO19G01760|organism=Nannochloropsis oceanica|type=gene|length=1277bp
TATTTTTTGCATAATAATGCCCTACGCCGCAGTCCTAATGCCTTTTGTAG
ATGGTCTGTCGTATGAGAAGGCGGGACGCAGGGCCACACAACCGAAGCCT
CCGGGGAAACCATTATATGTTGATCGGGCAGGGGACATGTCGTTGCTGTA
AAATATTTCCCCATCATCCACCCTCCCACGGGGTGTAGTATGTGTATTTT
CCCCTCCCCTTGATATGATACCTTCCTCCGGCTGATGTGCTACCTGGCAA
TGCCCACCCCTCTTGCTGTTTGTGTCTCCTTGTTTTTGGTCGCAAGTGCT
GCCTGCTTGCCCCTCCTGAGAAGGACTCTCGGCAGCTCCACGGGGCTTCA
CATCGCTGCTCTGCGACTACGTGCGTACCCCTTGGCCACCCTCGGACATG
ACAGAGCTTAAGTGTGAAGTTGCTTTCAAGGAAATTATATGTCCAAGCCC
AAATTTTTGCCCGCTTCTTGTGTTTTTGCCGGCCTCCAATCCACGCACTG
CTTTCCTCTAACGAGGAGGAGGAGGGGAGGAGGGGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGATCAGTAGTAGAAGGAGCACTGGTAGTAGCACCA
GAAGCAGCAGGTGAAGGAGGGGGGGAAGGACGAGGAGgtggataaggagt
tgaacgaggaggtggacgaggaggagaagaggaagaagatgaggaggaag
gagaagaagaagaagaaaaaggaaaagaaaaagaaggaaaagaagaagga
gatgatgatgaaagaaagaagaggaagacgaataagaaaaagAGGAAGAG
GAGGAAGAAGGAGGGGGAGTGAGGGAAGGAGGAGGAGGGAAAGACGGAGG
GACACGAGGAGGAGAAGGGAGAGGAGAGAGAGGAGGAGGGAGAGAAGGAG
GAAGAGTAGGAGTAGGGAGAGGGAGAAGAGGGGGAAGGGTACGAGGAGGA
TGGGAAAGGGGAGAAGAAGGAGGAGCAATAACAAGAGGAGCAATAGCAGC
AGCAGCAGCAGCAGGAGGAGGACGATGCGGAGGAGGAGGCGGAGGCGGAG
GAGGAGGAGGAAGAGGCGGAGGAGGAGGAGGAGGTCACGTGCGGGCCACC
AGAGGACTTTATTGGTGTGACACCTGTGAACAGTTCGTGTCTCGGGACGG
CAATGGGGCACGCAACATCCTGCGGGTGTACAGGAGTATGGTCCGTGGAG
AAGCTCGTCCCCATGATCTCCGGTTTGGTCTACCGCGGCAATATATAGGG
ACATTCTACCTGTTGCCTTCTCACTGA
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protein sequence of NO19G01760.1

>NO19G01760.1-protein ID=NO19G01760.1-protein|Name=NO19G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=228bp
MSKPKFLPASCVFAGLQSTHCFPLTRRRRGGGGGGGGGGGGGGSVVEGAL
VVAPEAAGEGGGEGRGEEEEEEGGGVREGGGGKDGGTRGGEGRGERGGGR
EGGRVGVGRGRRGGRVRGGWERGEEGGAITRGAIAAAAAAGGGRCGGGGG
GGGGGGRGGGGGGGHVRATRGLYWCDTCEQFVSRDGNGARNILRVYRSMV
RGEARPHDLRFGLPRQYIGTFYLLPSH*
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Synonyms
Publications