NO19G01580, NO19G01580 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO19G01580
Unique Name	NO19G01580
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2114
Alignment location	chr19:474842..476955 +

Link to JBrowse

Properties


Property Name	Value
Description	Serine/threonine-protein phosphatase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr19	genome	chr19:474842..476955 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004721	phosphoprotein phosphatase activity
GO:0005515	protein binding
GO:0016787	hydrolase activity
GO:0016787	hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006470	protein dephosphorylation
GO:0006464	cellular protein modification process

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom
IPR013026	TPR-contain_dom
IPR011236	Ser/Thr_PPase_5
IPR013235	PPP_dom
IPR004843	Calcineurin-like_PHP_apaH
IPR019734	TPR_repeat
IPR006186	Ser/Thr-sp_prot-phosphatase

Homology

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BLAST of NO19G01580 vs. NCBI_GenBank
Match: EWM23660.1 (serine threonine-protein phosphatase 5 [Nannochloropsis gaditana])

HSP 1 Score: 732.3 bits (1889), Expect = 1.000e-207
Identity = 375/515 (72.82%), Postives = 417/515 (80.97%), Query Frame = 0

Query:    9 QVTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRG------------QLRRT---------------RAGGRGRRERGGGEEDVRVTPAFLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            +VT+  AH  SKAT + ATALK+EGN+AL +NHFE+ATE Y+QA+ LHPTA+LYSNRA+AAI+MENYG+AIQDAE AI LDP YLKAFYRRGSA YALGK KEALRDFKHV KVHPRD+DA AK RE     +               L +T               R G  G  E G  E ++ VTP+FLE+LTERFK QKLLHTKY I++LLA L+ FQ+LPN++EL+T D+P   + E GRE      +G VITVCGDTHGQFFDVLRIFE+NGKPS +NPYLFNGDFVDRGSFSFEVITLLLAYKVAYP  MHLVRGNHESK+MNRIYGFEGE+KHKYDE MMGLFTEVFCAMPLCATID+S+FIVHGGLAA+DGVTL DINK+YRFREPPESGLMSDLLWSDPQP PGR PSKRGVGLSFGPDVT RFL+ N LKMVVRSHEVKEEGY VEHDGKCVTVFSAPNYCDQMGNKGAFIRF   +  P YTQF+AAPHPPI+PMAYA NMMGL
Sbjct:   10 EVTMGDAHGPSKATKETATALKEEGNRALHDNHFEQATEYYTQALALHPTAVLYSNRAMAAIKMENYGIAIQDAEEAIALDPGYLKAFYRRGSAKYALGKYKEALRDFKHVVKVHPRDRDAVAKLRECEKCVKIAAFAAAIQTEDSMPLSQTINVDAIVVEDSYDGPRLGPEG-GEEGMAEGELGVTPSFLEDLTERFKAQKLLHTKYVIRILLAALRLFQALPNVMELRTRDIPRTPDAEAGRE------EGNVITVCGDTHGQFFDVLRIFEMNGKPSPTNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPSSMHLVRGNHESKSMNRIYGFEGEIKHKYDEAMMGLFTEVFCAMPLCATIDASVFIVHGGLAAQDGVTLADINKIYRFREPPESGLMSDLLWSDPQPMPGRLPSKRGVGLSFGPDVTNRFLETNGLKMVVRSHEVKEEGYQVEHDGKCVTVFSAPNYCDQMGNKGAFIRF-GPDLVPRYTQFQAAPHPPIRPMAYASNMMGL 516

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BLAST of NO19G01580 vs. NCBI_GenBank
Match: GAX97426.1 (serine/threonine-protein phosphatase 5 [Pythium insidiosum])

HSP 1 Score: 542.7 bits (1397), Expect = 1.200e-150
Identity = 288/516 (55.81%), Postives = 357/516 (69.19%), Query Frame = 0

Query:    1 MSTTNRHYQVTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRGQLRRTRAGGRGRRERGGGE----EDVRVTPA----------------FLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            MS +    +VTV + H  S+ T   A ALK +GN+ALQ   F  A +LY+QAI L PTAI Y+NRA A ++ E+YG+AI DA AA++LD +Y+KA+YRRGSAN ALG +K+A++DF+ V K+ P+DKDA AK    +L  +  +     A  +  R R   E    + + V PA                FL  L +RFK  KLLH KY I++LLA+     SLP+++ +   D                 G    ITVCGDTHGQF+DV  IF LNG PS SNPYLFNGDFVDRGSFSFEV+  L A K+ YP  +HL+RGNHESKNMN+IYGFEGEVKHKYDE +MGLFTEVF  +PL A I++ + +VHGGL ++D V+L+DI K+ R REPPESGLMSDL+WSDPQP PGR PSKRG+GLSFGPD+T  FL  N L+++VRSHEVK+EGY VEHDGKC+TVFSAPNYCDQMGNKGAFIRF   + +P +TQF A  HPPI+PMAYA NM G+
Sbjct:    1 MSASPSDVKVTVGEPHAVSEETKARAEALKAQGNEALQHFKFAAAVDLYTQAIALFPTAIYYANRAAAHMKNESYGLAIDDASAALELDSTYIKAYYRRGSANLALGHHKKAVKDFRLVAKLRPQDKDARAKL---KLCEKIIKEAAFAAAIQSERNRPLSETIDVDSIVVDPAYDGPHLPADLSATKHDFLVALMDRFKRGKLLHRKYVIQILLAMKTMLSSLPSLLRVSLGD-----------------GADAHITVCGDTHGQFYDVCNIFALNGMPSESNPYLFNGDFVDRGSFSFEVVMTLFAMKLVYPQHVHLLRGNHESKNMNKIYGFEGEVKHKYDETVMGLFTEVFNWLPLAAVIENRVLVVHGGLFSDDQVSLEDIEKIDRNREPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDITKAFLAYNNLELLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRF-GKDMQPKFTQFTAVEHPPIRPMAYAGNMGGM 495

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BLAST of NO19G01580 vs. NCBI_GenBank
Match: CCA27195.1 (serine/threonineprotein phosphatase 5 putative [Albugo laibachii Nc14])

HSP 1 Score: 534.6 bits (1376), Expect = 3.200e-148
Identity = 279/507 (55.03%), Postives = 348/507 (68.64%), Query Frame = 0

Query:   10 VTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRGQLRRTRAGGRGRRERGGGE-------------------EDVRVT-PAFLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            VT+ Q H  S+ +   A +LK+EGN++LQE  +  A ELY+ AIE++PTAI Y+NRA A ++ E+YG+AI+DA  AI +DP+Y+KA+YRRGSA  ALG  K AL++F+ V ++ P+DKDA  K+   +L  +  +     A  +  R     E                   +DV+ T P F+ EL ERFK  KLLH KY I +LL + K F SLP+++ +   D                      ITVCGDTHGQF+DV  IF LNG PS  NPYLFNGDFVDRGSFSFEV+  L A K+ YP  +HL+RGNHESKNMN+IYGFEGE+KHKYDE +M LFTEVF  +PL A +D+ + +VHGGL  ED V+L+DI K+ R REPPESG MSDL+WSDPQP  GR PSKRG+GLSFGPD+T  FL+ NKL ++VRSHEVK+EGY VEHDGKC+TVFSAPNYCDQMGNKGAFIRF      P++TQF A  HPPI+PMAYA NM G+
Sbjct:    4 VTIGQTHEISEESKREADSLKNEGNQSLQEYKYRNAVELYTAAIEIYPTAIYYANRAAAHMKTESYGLAIKDATNAIGMDPNYVKAYYRRGSAELALGHYKAALKNFRLVVQMKPQDKDARMKY---KLCDKLVKEAAFAAAIQSERNLPISETIDVDSIVIDSSYDGPRLADDVQSTLPDFIPELMERFKKGKLLHRKYVILILLEMKKLFSSLPSLLRITLPDADADDAH---------------ITVCGDTHGQFYDVCNIFNLNGMPSEENPYLFNGDFVDRGSFSFEVVMTLFAMKLIYPRHVHLLRGNHESKNMNKIYGFEGEIKHKYDETVMQLFTEVFNWLPLAAVLDNRVLVVHGGLFGEDDVSLEDIEKIERNREPPESGYMSDLMWSDPQPFAGRGPSKRGIGLSFGPDITRAFLEYNKLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRF-EKNMVPIFTQFTAVEHPPIRPMAYAANMGGM 491

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BLAST of NO19G01580 vs. NCBI_GenBank
Match: POM79022.1 (Serine/threonine-protein phosphatase 5 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 528.1 bits (1359), Expect = 3.000e-146
Identity = 270/487 (55.44%), Postives = 338/487 (69.40%), Query Frame = 0

Query:   10 VTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRGQLRRTRAGGRGRRERGGGEEDVRVTPAFLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            VT    H  S  T   A A K +GN+AL    F  A + Y++AIEL PTAI Y+NRA A ++ E+YG+AI DA AAIDL+PSY+KA+YRRGSA  ALG +K+A++DF+ V ++ P+D+DA AK +      +           R        ++  +    F+  L +RFK  KLLH K+ I++LL + +   +LP+++ +      P +                  TVCGDTHGQF+DV  IF LNG PS +NPYLFNGDFVDRGSFSFEV+  L A K+ YP  +HL+RGNHESKNMN+IYGFEGEVKHKYDE +M LFTEVF  +PL A I++ + +VHGGL +E+ VTL DI K+ R REPPESGLMSDL+WSDPQP PGR PSKRG+GLSFGPDVT  FL+ NKL ++VRSHEVK+EGY VEHDGKC+TVFSAPNYCDQMGNKGAFIRF   + +P +TQF A  HPPI+PMAYA NM G+
Sbjct:    6 VTEGAPHAVSDETRARADAFKTQGNEALAHFKFAAAVDFYTKAIELVPTAIFYANRAAAHVKSESYGLAIDDASAAIDLEPSYIKAYYRRGSAQLALGHHKKAVKDFRLVVRMKPQDRDARAKLKLCEKIIKEAAFAAAIQSERNLPLSETIDDVTQTKSDFIVALMDRFKRGKLLHRKFVIQILLKLKEMLCALPSLLRISLPSDDPDAH----------------FTVCGDTHGQFYDVCNIFSLNGLPSETNPYLFNGDFVDRGSFSFEVVMTLFAMKIVYPQHVHLLRGNHESKNMNKIYGFEGEVKHKYDETVMQLFTEVFNWLPLAAVIENKVLVVHGGLFSEENVTLADIEKIDRNREPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDVTKAFLEHNKLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRF-EKDMQPRFTQFVAVEHPPIRPMAYAGNMGGM 475

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BLAST of NO19G01580 vs. NCBI_GenBank
Match: XP_008907379.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI43759.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK83825.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL37240.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL90379.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN07003.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO72435.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP13570.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP41633.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 525.0 bits (1351), Expect = 2.500e-145
Identity = 279/507 (55.03%), Postives = 347/507 (68.44%), Query Frame = 0

Query:   10 VTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRGQLRRTRAGGRGRRERGGGE-------------------EDVRVT-PAFLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            VT    H  S  T   A ALK +GN+AL    F +A ELY++AIEL PTAI Y+NRA A ++ E+YG+AI D+ AAI+L+PSY+KA+YRRGSA  ALG +K+A++DF+ V ++ P+D+DA  K    +L  +  +     A  +  R     E                   EDV  T P F+  L +RFK  KLLH K+ I++LL + +   +LP+++ +      P +                  TVCGDTHGQF+DV  IF LNG PS SNPYLFNGDFVDRGSFSFEV+  L A K+ YP  +HL+RGNHESKNMN+IYGFEGEVKHKYDE +M LFTEVF  +PL A I++ + +VHGGL +E+ VTL DI K+ R REPPESGLMSDL+WSDPQP PGR PSKRG+GLSFGPDVT  FL+LN L ++VRSHEVK+EGY VEHDGKC+TVFSAPNYCDQMGNKGAFIRF   + +P +TQF A  HPPI+PMAYA NM G+
Sbjct:   25 VTEGAPHAVSDETRARADALKVQGNEALANFKFAQAVELYTKAIELVPTAIFYANRAAAHVKSESYGLAIDDSSAAIELEPSYIKAYYRRGSAQLALGHHKKAVKDFRLVVRMKPQDRDARTKL---KLCEKIIKEAAFAAAIQSERNLPLSETIDVNSLVVDPSYDGPCLPEDVSKTKPDFIVALMDRFKRGKLLHRKFVIQILLKLKEMLCALPSLLRVSLPADDPDAH----------------FTVCGDTHGQFYDVCNIFSLNGLPSESNPYLFNGDFVDRGSFSFEVVMTLFAMKLVYPQHVHLLRGNHESKNMNKIYGFEGEVKHKYDETVMQLFTEVFNWLPLAAVIENKVLVVHGGLFSEENVTLADIEKIDRNREPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDVTKAFLELNNLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRF-ERDMQPRFTQFVAVEHPPIRPMAYAGNMGGM 511

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BLAST of NO19G01580 vs. NCBI_GenBank
Match: CCI42080.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 524.6 bits (1350), Expect = 3.300e-145
Identity = 277/507 (54.64%), Postives = 343/507 (67.65%), Query Frame = 0

Query:   10 VTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRGQLRRTRAGGRGRRERGGGE-------------------EDVRVT-PAFLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            V V  A   S+ +   A  LK EGN++LQE  +  A ELY+ AIE++PTAI Y+NRA A ++ E+YG+AI+DA  AI +DP+Y+KA+YRRGSA  ALG  K AL++F+ V K+ P+DKDA  K+   +L  +  +     A  +  R     E                   +DV+ T P F+ EL +RFK  KLLH KY I +LL + K F SLP+++ +   D                      ITVCGDTHGQF+DV  IF LNG PS  NPYLFNGDFVDRGSFSFEV+  L A K+ YP  +HL+RGNHESKNMN+IYGFEGE+KHKYDE +M LFTEVF  +PL A +D+ + +VHGGL  ED V+L+DI K+ R REPPESG MSDL+WSDPQP  GR PSKRG+GLSFGPD+T  FL+ N L ++VRSHEVK+EGY VEHDGKC+TVFSAPNYCDQMGNKGAFIRF      P++TQF A  HPPI+PMAYA NM G+
Sbjct:    4 VAVGNAQQVSEDSRKQAELLKHEGNQSLQEYKYRNAVELYTAAIEVYPTAIYYANRAAAHMKTESYGLAIKDATDAITMDPNYVKAYYRRGSAELALGHYKAALKNFRLVVKMKPQDKDARMKY---KLCDKLVKEAAFAAAIQSERNLPISETVDVDSIVIDSSYDGPRLSDDVKSTSPDFISELMDRFKRGKLLHRKYVILILLEMKKLFSSLPSLLRITLPD-----------------ANDAHITVCGDTHGQFYDVCNIFHLNGMPSGDNPYLFNGDFVDRGSFSFEVVMTLFAMKLIYPKHVHLLRGNHESKNMNKIYGFEGEIKHKYDETVMLLFTEVFNWLPLAAVLDNRVLVVHGGLFGEDDVSLEDIEKIERNREPPESGYMSDLMWSDPQPFAGRGPSKRGIGLSFGPDITHAFLEYNDLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRF-EKNMVPIFTQFTAVEHPPIRPMAYAANMGGM 489

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BLAST of NO19G01580 vs. NCBI_GenBank
Match: KUF64920.1 (Serine/threonine-protein phosphatase [Phytophthora nicotianae])

HSP 1 Score: 524.6 bits (1350), Expect = 3.300e-145
Identity = 279/507 (55.03%), Postives = 347/507 (68.44%), Query Frame = 0

Query:   10 VTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRGQLRRTRAGGRGRRERGGGE-------------------EDVRVT-PAFLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            VT    H  S  T   A ALK +GN+AL    F +A ELY++AIEL PTAI Y+NRA A ++ E+YG+AI D+ AAI+L+PSY+KA+YRRGSA  ALG +K+A++DF+ V ++ P+D+DA  K    +L  +  +     A  +  R     E                   EDV  T P F+  L +RFK  KLLH K+ I++LL + +   +LP+++ +      P +                  TVCGDTHGQF+DV  IF LNG PS SNPYLFNGDFVDRGSFSFEV+  L A K+ YP  +HL+RGNHESKNMN+IYGFEGEVKHKYDE +M LFTEVF  +PL A I++ + +VHGGL +E+ VTL DI K+ R REPPESGLMSDL+WSDPQP PGR PSKRG+GLSFGPDVT  FL+LN L ++VRSHEVK+EGY VEHDGKC+TVFSAPNYCDQMGNKGAFIRF   + +P +TQF A  HPPI+PMAYA NM G+
Sbjct:    6 VTEGAPHAVSDETRARADALKVQGNEALANFKFAQAVELYTKAIELVPTAIFYANRAAAHVKSESYGLAIDDSSAAIELEPSYIKAYYRRGSAQLALGHHKKAVKDFRLVVRMKPQDRDARTKL---KLCEKIIKEAAFAAAIQSERNLPLSETIDVNSLVVDPSYDGPCLPEDVSKTKPDFIVALMDRFKRGKLLHRKFVIQILLKLKEMLCALPSLLRVSLPADDPDAH----------------FTVCGDTHGQFYDVCNIFSLNGLPSESNPYLFNGDFVDRGSFSFEVVMTLFAMKLVYPQHVHLLRGNHESKNMNKIYGFEGEVKHKYDETVMQLFTEVFNWLPLVAVIENKVLVVHGGLFSEENVTLADIEKIDRNREPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDVTKAFLELNNLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRF-ERDMQPRFTQFVAVEHPPIRPMAYAGNMGGM 492

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BLAST of NO19G01580 vs. NCBI_GenBank
Match: XP_002906665.1 (serine/threonine-protein phosphatase 5 [Phytophthora infestans T30-4] >EEY66066.1 serine/threonine-protein phosphatase 5 [Phytophthora infestans T30-4])

HSP 1 Score: 524.2 bits (1349), Expect = 4.300e-145
Identity = 277/508 (54.53%), Postives = 348/508 (68.50%), Query Frame = 0

Query:    9 QVTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRGQLRRTRAGGRGRRERGGGE-------------------EDVRVT-PAFLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            Q+T    H  S  T   A  LK +GN+AL    F +A ELY++AIEL PTAI Y+NRA A ++ E+YG+AI+DA AAI+L+ SY+KA+YRRGSA  ALG +K+A++DF+ V ++ P+D+DA AK    +L  +  +     A  +  R     E                   EDV  T P F+  L +RFK  KLLH K+ I++LL + +   +LP+++ +      P +                  TVCGDTHGQ++DV  IF LNG PS SNPYLFNGDFVDRGSFSFEV+  L A K+ YP  +HL+RGNHESKNMN+IYGFEGEVKHKYDE +M LFTEVF  +PL A I++ + +VHGGL +++ VTL DI K+ R REPPESGLMSDL+WSDPQP PGR PSKRG+GLSFGPDVT  FL+LN L ++VRSHEVK+EGY VEHDGKC+TVFSAPNYCDQMGNKGAFIRF   + +P +TQF A  HPPI+PMAYA NM G+
Sbjct:    5 QLTEGAPHAVSDETRALADTLKAQGNEALSHFKFAQAVELYTKAIELVPTAIFYANRAAAHVKSESYGLAIEDASAAIELEASYIKAYYRRGSAELALGHHKKAIKDFRLVVRIKPQDRDARAKL---KLCEKIIKEAAFAAAIQSERNLPLSETIDVNSLVVDPSYDGPCLPEDVSKTKPDFIVALMDRFKRGKLLHRKFVIQILLKLKEMLCALPSLLRVSLPTDDPDAH----------------FTVCGDTHGQYYDVCNIFSLNGLPSESNPYLFNGDFVDRGSFSFEVVMTLFAMKLVYPQHVHLLRGNHESKNMNKIYGFEGEVKHKYDETVMQLFTEVFNWLPLAAVIENKVLVVHGGLFSDENVTLADIEKIDRNREPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDVTKAFLELNNLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRF-ERDMQPRFTQFVAVEHPPIRPMAYAGNMGGM 492

[Close]

BLAST of NO19G01580 vs. NCBI_GenBank
Match: CCI42081.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 523.5 bits (1347), Expect = 7.300e-145
Identity = 278/506 (54.94%), Postives = 344/506 (67.98%), Query Frame = 0

Query:   10 VTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFR---------------ESRLHHR---RGQLRRTRAGGRGRRERGGGEEDVRVT-PAFLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            V V  A   S+ +   A  LK EGN++LQE  +  A ELY+ AIE++PTAI Y+NRA A ++ E+YG+AI+DA  AI +DP+Y+KA+YRRGSA  ALG  K AL++F+ V K+ P+DKDA  K++               +S L+        L    +   G R      +DV+ T P F+ EL +RFK  KLLH KY I +LL + K F SLP+++ +   D                      ITVCGDTHGQF+DV  IF LNG PS  NPYLFNGDFVDRGSFSFEV+  L A K+ YP  +HL+RGNHESKNMN+IYGFEGE+KHKYDE +M LFTEVF  +PL A +D+ + +VHGGL  ED V+L+DI K+ R REPPESG MSDL+WSDPQP  GR PSKRG+GLSFGPD+T  FL+ N L ++VRSHEVK+EGY VEHDGKC+TVFSAPNYCDQMGNKGAFIRF      P++TQF A  HPPI+PMAYA NM G+
Sbjct:    4 VAVGNAQQVSEDSRKQAELLKHEGNQSLQEYKYRNAVELYTAAIEVYPTAIYYANRAAAHMKTESYGLAIKDATDAITMDPNYVKAYYRRGSAELALGHYKAALKNFRLVVKMKPQDKDARMKYKLCDKLVKEAAFAAAIQSELNDPCLIPILLTVIDSSYDGPRL----SDDVKSTSPDFISELMDRFKRGKLLHRKYVILILLEMKKLFSSLPSLLRITLPD-----------------ANDAHITVCGDTHGQFYDVCNIFHLNGMPSGDNPYLFNGDFVDRGSFSFEVVMTLFAMKLIYPKHVHLLRGNHESKNMNKIYGFEGEIKHKYDETVMLLFTEVFNWLPLAAVLDNRVLVVHGGLFGEDDVSLEDIEKIERNREPPESGYMSDLMWSDPQPFAGRGPSKRGIGLSFGPDITHAFLEYNDLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMGNKGAFIRF-EKNMVPIFTQFTAVEHPPIRPMAYAANMGGM 487

[Close]

BLAST of NO19G01580 vs. NCBI_GenBank
Match: ETM43684.1 (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 522.7 bits (1345), Expect = 1.200e-144
Identity = 278/507 (54.83%), Postives = 346/507 (68.24%), Query Frame = 0

Query:   10 VTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYSQAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRGSANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRGQLRRTRAGGRGRRERGGGE-------------------EDVRVT-PAFLEELTERFKNQKLLHTKYAIKLLLAVLKQFQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDVLRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLVRGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFIVHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKRGVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPNYCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL 497
            VT    H  S  T   A ALK +GN+AL    F +A ELY++AIEL PTAI Y+NRA A ++ E+YG+AI D+ AAI+L+PSY+KA+YRRGSA  ALG +K+A++DF+ V ++ P+D+DA  K    +L  +  +     A  +  R     E                   EDV  T P F+  L +RFK  KLLH K+ I++LL + +   +LP+++ +      P +                  TVCGDTHGQF+DV  IF LNG PS SNPYLFNGDFVDRGSFSFEV+  L A K+ YP  +HL+RGNHESKNMN+IYGFEGEVKHKYDE +M LFTEVF  +PL A I++ + +VHGGL +E+ VTL DI K+ R REPPESGLMSDL+WSDPQP PGR PSKRG+GLSFGPDVT  FL+LN L ++VRSHEVK+EGY VEHDGKC+TVFSAPNYCDQM NKGAFIRF   + +P +TQF A  HPPI+PMAYA NM G+
Sbjct:   25 VTEGAPHAVSDETRARADALKVQGNEALANFKFAQAVELYTKAIELVPTAIFYANRAAAHVKSESYGLAIDDSSAAIELEPSYIKAYYRRGSAQLALGHHKKAVKDFRLVVRMKPQDRDARTKL---KLCEKIIKEAAFAAAIQSERNLPLSETIDVNSLVVDPSYDGPCLPEDVSKTKPDFIVALMDRFKRGKLLHRKFVIQILLKLKEMLCALPSLLRVSLPADDPDAH----------------FTVCGDTHGQFYDVCNIFSLNGLPSESNPYLFNGDFVDRGSFSFEVVMTLFAMKLVYPQHVHLLRGNHESKNMNKIYGFEGEVKHKYDETVMQLFTEVFNWLPLAAVIENKVLVVHGGLFSEENVTLADIEKIDRNREPPESGLMSDLMWSDPQPFPGRGPSKRGIGLSFGPDVTKAFLELNNLDLLVRSHEVKDEGYLVEHDGKCITVFSAPNYCDQMSNKGAFIRF-ERDMQPRFTQFVAVEHPPIRPMAYAGNMGGM 511

The following BLAST results are available for this feature:

BLAST of NO19G01580 vs. NCBI_GenBank

BLAST of NO19G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM23660.1	1.000e-207	72.82	serine threonine-protein phosphatase 5 [Nannochlor...	[more]
GAX97426.1	1.200e-150	55.81	serine/threonine-protein phosphatase 5 [Pythium in...	[more]
CCA27195.1	3.200e-148	55.03	serine/threonineprotein phosphatase 5 putative [Al...	[more]
POM79022.1	3.000e-146	55.44	Serine/threonine-protein phosphatase 5 [Phytophtho...	[more]
XP_008907379.1	2.500e-145	55.03	hypothetical protein, variant 1 [Phytophthora para...	[more]
CCI42080.1	3.300e-145	54.64	unnamed protein product [Albugo candida]	[more]
KUF64920.1	3.300e-145	55.03	Serine/threonine-protein phosphatase [Phytophthora...	[more]
XP_002906665.1	4.300e-145	54.53	serine/threonine-protein phosphatase 5 [Phytophtho...	[more]
CCI42081.1	7.300e-145	54.94	unnamed protein product [Albugo candida]	[more]
ETM43684.1	1.200e-144	54.83	hypothetical protein, variant 1 [Phytophthora para...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL012	nonsL012	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR034	ncniR034	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR039	ngnoR039	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK004495	NSK004495	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO19G01580.1	NO19G01580.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|599160	gene_7556	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100191g17	gene6796	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO19G01580.1	NO19G01580.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO19G01580 ID=NO19G01580|Name=NO19G01580|organism=Nannochloropsis oceanica|type=gene|length=2114bp
ATGAGCACGACGAACAGACACTACCAAGTCACCGTCGCGCAGGCCCACCA
CGCGTCTAAAgtacgttcttgcccctgccggctagtccaggaacaggcac
ttcttctatttcgctcaaccccgcttgtggtcaatgcggcttgcaggcga
tttgcctgcagtgttctaccatatcacagctgcctttaatttatctttgc
agcgtcatgtaatgctgattttggctagcacatattgcacttgcaccgtt
tgcatttgccgtggccttctgcgtgcgtggctggcgccttcaacctcccc
tctgagcatcacgtacaccaccatcatctctcatcatttttcactctccc
cagGCAACCATGGACGCAGCAACAGCTCTCAAGGATGAAGGGAACAAAGC
TTTGCAAGAAAATCATTTCGAGAAGGCCACAGAGCTTTACTCACAAGCAA
TCGAGTTGCATCCTACTGCTATCCTATATTCCAACCGCGCTCTGGCCGCG
ATTCGAATGGAGAACTACGGCATGGCCATCCAAGACGCAGAGGCTGCCAT
TGACCTGGACCCTAGTTACCTCAAGGCTTTCTATAGGAGAGGCAGTGCTA
ATTATGCGCTTGGCAAGgtaagcgttttttttaaatgttgggttttggtc
ctccgtttcatttcttctccctctctccctctctccttttcttagAACAA
AGAGGCCCTGCGTGATTTCAAACATGTCTTCAAGGTCCATCCCCGTGACA
AGGACGCTGCGGCAAAATTTCGGGAATgtgaaaaggccgtgaaggctgca
gcgttcgccgcagccattcaaacagaagacagcatgcctttgtcccaaac
cgtccagCCCGACTCCATCATCGTCGAGGACAGCTACGACGGACCCGTGC
TGGAGGACGGGGAAGGCGGGAAAGAGGGGGGGGGGAGGAGGACGTGCGAG
TGACCCCGGCGTTCCTGGAGGAGTTGACAGAGAGGTTTAAGAACCAGAAG
CTGCTGCACACCAAGTACGCCATAAAGCTGTTGCTGGCTGTCCTGAAGCA
ATTCCAATCCCTCCCTAATATAATTGAATTGAAGACTGCTGATGTCCCCC
CTCCTTCAGAGGAAGAGGTCGGGAGGGAGGGAGGAGTGGCGATGGGGAAG
GGGAAGGTGATCACGGTATGCGGGGATACCCACGGACAGTTTTTCGATGT
CCTGAGAATTTTTGAATTAAACGGCAAGCCAAGTAACAGCAACCCGTATC
TGTTTAACGGCGACTTTGTGGATCGTGGCTCGTTCTCGTTCGAGGTCATC
ACGTTGCTGCTGGCCTACAAGGTGGCGTACCCCATGGGCATGCACCTGGT
AAGAGGGAACCACGAGAGCAAGAACATGAACCGCATCTACGGCTTCGAGG
GCGAGGTGAAGCATAAGTACGATGAGGTTATGATGGGGCTCTTCACCGAG
gtatggttcctcttccagccagccttcgctcctttcttttatccctctct
tcccttgtgacaaaccacttcctctcattccctctcctcgctgcccgcga
tctaccttctctttccttccgtccttctttccgtccctccctccctccct
ccttccctccctcactccccagGTGTTCTGTGCCATGCCCCTGTGCGCCA
CCATCGACTCCTCCATTTTCATCGTCCACGGTGGCCTGGCCGCTGAAGAC
GGAGTCACGCTCGACGACATCAATAAGGTCTACCGTTTCCGAGAACCGCC
CGAGAGCGGCCTCATGAGCGACTTGCTCTGGTCGGACCCCCAGCCTGCCC
CTGGCCGGCAGCCGAGCAAGCGTGGGGTAGGGTTGAGTTTTGGACCCGAT
GTGACGGCCAGATTTTTGGACTTGAACAAGTTGAAGATGGTGGTGAGGAG
TCATGAGGTGAAGGAGGAGGGGTACAGTGTGGAGCATGATGGAAAGTGCG
TCACAGTCTTCTCGGCGCCGAACTACTGCGACCAGATGGGTAACAAGGGG
GCGTTCATTCGATTTTGCCACGGTGAGAATGAGCCTGTCTACACACAGTT
TGAGGCGGCGCCGCACCCGCCGATAAAGCCCATGGCATATGCGAGGAATA
TGATGGGGTTGTAA

protein sequence of NO19G01580.1

>NO19G01580.1-protein ID=NO19G01580.1-protein|Name=NO19G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=497bp
MSTTNRHYQVTVAQAHHASKATMDAATALKDEGNKALQENHFEKATELYS
QAIELHPTAILYSNRALAAIRMENYGMAIQDAEAAIDLDPSYLKAFYRRG
SANYALGKNKEALRDFKHVFKVHPRDKDAAAKFRESRLHHRRGQLRRTRA
GGRGRRERGGGEEDVRVTPAFLEELTERFKNQKLLHTKYAIKLLLAVLKQ
FQSLPNIIELKTADVPPPSEEEVGREGGVAMGKGKVITVCGDTHGQFFDV
LRIFELNGKPSNSNPYLFNGDFVDRGSFSFEVITLLLAYKVAYPMGMHLV
RGNHESKNMNRIYGFEGEVKHKYDEVMMGLFTEVFCAMPLCATIDSSIFI
VHGGLAAEDGVTLDDINKVYRFREPPESGLMSDLLWSDPQPAPGRQPSKR
GVGLSFGPDVTARFLDLNKLKMVVRSHEVKEEGYSVEHDGKCVTVFSAPN
YCDQMGNKGAFIRFCHGENEPVYTQFEAAPHPPIKPMAYARNMMGL*

Synonyms

Publications