NO19G01560, NO19G01560 (gene) Nannochloropsis oceanica

Overview
NameNO19G01560
Unique NameNO19G01560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1317
Alignment locationchr19:471465..472781 +

Link to JBrowse

Properties
Property NameValue
DescriptionA1 cistron-splicing factor, AAR2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:471465..472781 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007946AAR2
Homology
BLAST of NO19G01560 vs. NCBI_GenBank
Match: XP_002899360.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY62329.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 157.9 bits (398), Expect = 7.100e-35
Identity = 105/332 (31.63%), Postives = 166/332 (50.00%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTFGT---GQGLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVLALCGLKVETRILPGAWEEEKIHARGEEEKREGGELVPFFPGLGHAATFTDVRGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKETTALLCHASLSPSLPQYFPLYHAFLHVFSAQSSAMPSDFFFNDEEGEMVKGKESFLQPCL 330
            +P+ +EFG+D ++ + GP F+GV  +PLG+HF+ + +     G+RQGFFV++ R  +V+V+ W   +EEL     GL   ++ NL +A+   +L+  LG+YP ++  + W  LS YI+  VL  CG++    +LPG    + +       K + G + P+FP L     FT ++     +   D+     T YH DR   L E++   +                                  WK L+GE QL+FL+FL L S+A L+ WK+  AL+C  S   +L  + PL+ AF+ +F  Q   +    FF DE        E+FL+PCL
Sbjct:   45 VPAATEFGVDYEVFRTGPEFQGVKFLPLGIHFVLYRSRDQEHGIRQGFFVNVERNAQVIVREWSLEKEELGLPRLGL---NVENLERAVLSFQLDSGLGSYP-KQHLKTWHRLSSYISASVLQRCGVEFGAILLPG----DAVDDAATLFKTQDG-VTPYFPDLPRTVGFTALQ-----RTRTDLLAEARTGYHFDRRWRLVELIETEFG-------------------------------GDWKELMGELQLSFLVFLQLSSLAALEQWKQFIALMC--SCERALSSHVPLFMAFIKLFRTQ---LEQVHFFQDE-----TTSENFLRPCL 321          
BLAST of NO19G01560 vs. NCBI_GenBank
Match: CBN75489.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 156.0 bits (393), Expect = 2.700e-34
Identity = 110/364 (30.22%), Postives = 169/364 (46.43%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTFGTGQGLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVLALCGLKVETRILPGAWEEEKIHARGE--------EEK-------------------------REGGELVPFFPGLGHAATFTDV--RGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKETTALLCHASLSPSLPQYFPLYHAFLHVFSAQSSAMPSDFFFNDEEGEMVKGKESFLQPCL 330
            +P G EFGID++  + GP F+GV  +P GLHF  FGTG+G +QG F   S    V    WD + E+L++  T L +G++  L +++ R E++K LG +P  EQ   W +L+  +T+ VL  CG+ V  ++L G+   E     GE        EE                            G ++VP FP +G  A + +V  R     KNA    P +VT+ ++D S+ L   +   +                                 +W  LLGE QL+F+LF++L S+ G +HW+  +ALLC      +L     L+ AF+ +  A    +P DFF      ++   K++FL PCL
Sbjct:   26 VPPGVEFGIDLKSYKTGPQFKGVKMIPPGLHFTHFGTGEGEKQGIFFR-SSAGSVAATQWDTSAEDLVDAQTCLPDGAVRALRESVLRLEMDKSLGPHP-FEQQAAWLNLTNCVTDSVLERCGVPVGAKVLAGSSAAEPGEPGGEGVPXXXXXEESXXXXXXXXXXXXXXXXXXXXXXXXXMAGRQIVPHFPHVGRVARYCEVPNRAQGPEKNA---NPEDVTKRNMDGSEALRMWIATDFG-------------------------------GSWVELLGELQLSFVLFVSLSSLGGFRHWQALSALLCRC--GDALKTDPALFTAFIRMLHAHLKLVPEDFF------DVELSKDNFLVPCL 345          
BLAST of NO19G01560 vs. NCBI_GenBank
Match: GAY02370.1 (Hypothetical protein PINS_010215 [Pythium insidiosum])

HSP 1 Score: 155.6 bits (392), Expect = 3.500e-34
Identity = 109/335 (32.54%), Postives = 168/335 (50.15%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTFGTGQ---GLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVLALCGLKVETRILPG-AWEEEKIHARGEEEKREGGELVPFFPGLGHAATFTDV--RGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKETTALLCHASLSPSLPQYFPLYHAFLHVFSAQSSAMPSDFFFNDEEGEMVKGKESFLQPCL 330
            +P  +EFGID ++ + GP F+GV  VP G+HF+ F + +   G+RQGFF+++    +VLV+ W   +EEL     GL   ++ +L  A+   +L++ LG YP ++  + W+ LS YIT  VL  CG+++ T ILPG A E    +A  E        + P+F        FT +  RG  +      MT  E T Y  D+S++LEE+L   +                                  W  LLGE+QLAF++FL L S+A L+ WK+   +LC  S   +L     L+ AFL    A    +P +FF    + E+   +++FL+PC+
Sbjct:   45 VPDATEFGIDYEVFRTGPKFQGVKFVPKGVHFVVFRSREHEHGIRQGFFLNVEYDGQVLVREWSAEKEELGPPRPGL---NIEHLTDAVHSFQLDRGLGPYP-KQHYKTWQRLSCYITHSVLKRCGIELGTLILPGDAAELPSSNATPE------NVVAPYFADAPRTVRFTPLARRGVHK------MTTQERTAYLFDKSKMLEELLETSFE-------------------------------HKWTELLGEFQLAFVVFLQLSSLAALEQWKQMLLMLC--SCEHALVTQPALFEAFLRSLRAHLKQIPPEFF----QEELT--EQNFLRPCM 324          
BLAST of NO19G01560 vs. NCBI_GenBank
Match: OWZ13435.1 (hypothetical protein PHMEG_00013239 [Phytophthora megakarya])

HSP 1 Score: 155.2 bits (391), Expect = 4.600e-34
Identity = 108/342 (31.58%), Postives = 166/342 (48.54%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTFGTGQ---GLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVL----------ALCGLKVETRILPGAWEEEKIHARGEEEKREGGELVPFFPGLGHAATFTDVRGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKETTALLCHASLSPSLPQYFPLYHAFLHVFSAQSSAMPSDFFFNDEEGEMVKGKESFLQPCL 330
            +PS +EFG+D ++ + GP F+GV  +PLG+HF+ F + +   G+RQGFFV++ R  +V+V+ W    EEL     GL   ++ NL +A+   +L+  LG YP ++  + W+ LS +I+  VL          A CG             EE   A    + +EG  +VP+FP L     FT ++     K   D++    T YH DRS+ LEE++   +                                  WK L+GE QL+FL+FL L S+A L+ WK+  AL+C  S   +L     L+ AF+ +   Q   +  DFF ++         E+FL+PCL
Sbjct:   37 VPSATEFGVDYEVFRTGPKFQGVKFLPLGIHFVLFRSREQEHGIRQGFFVNVERHAQVIVREWSLENEELGPPRPGL---NVDNLERAVLSFQLDSGLGPYP-KQHLKTWQRLSSFISATVLQFGAILLPGDARCGXXXXXXXXXXXXVEE---AATSTKTQEG--VVPYFPDLPRTVRFTTLQ-----KTRTDLSAEARTAYHFDRSERLEELIETEFG-------------------------------GEWKELVGELQLSFLVFLQLSSLAALEQWKQFIALMC--SCERALSSQVALFLAFIKLLRTQLEQISEDFFQDETT------SENFLRPCL 325          
BLAST of NO19G01560 vs. NCBI_GenBank
Match: XP_009821832.1 (hypothetical protein H257_00718 [Aphanomyces astaci] >ETV89432.1 hypothetical protein H257_00718 [Aphanomyces astaci])

HSP 1 Score: 154.8 bits (390), Expect = 6.000e-34
Identity = 106/315 (33.65%), Postives = 158/315 (50.16%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTFGT------GQGLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVLALCGLKVETRILPGAWEEEKIHARGEEEKREGGELVPFFPGLGHAATFTDVRGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKETTALLCHASLSPSLPQYFPLYHAFLHVFSAQSSAMPSDFF 310
            +P GSEFG+D +  +    FRGV  +P GLHF+ + +      G G+RQGFFV I +P +V++++W    EEL+      RE  + NL +A+   +L+  LGAYP++   + WR LS+YIT++VLA CGL V   I PG  +   +      E  +   L PFFP +   A FT +   K+P +    +  ++T YH+D S+ LE +L   +                                + W ALLGE QL+F+LFL L S+  L  WK+   LLC  S   ++     L+ AFL +       + +DFF
Sbjct:   15 VPVGSEFGVDYEAFRTAEKFRGVKLIPSGLHFVFYASNGEHDNGNGIRQGFFVEI-KPNDVVIRTWSSDTEELVPM---TREADVENLTRAVHGFQLDGNLGAYPQK-HAKTWRRLSKYITKEVLAQCGLTVGGTISPGDPDTLSL------ESNDLTTLKPFFPDVAQVARFTPL---KKP-STTQRSAGDLTLYHVDSSEHLEWLLSTHF-------------------------------HNDWHALLGELQLSFVLFLLLSSLDALHQWKQFVWLLC--SCEHAVTTQPALFAAFLQLMHVHLEQVGADFF 281          
BLAST of NO19G01560 vs. NCBI_GenBank
Match: XP_008609560.1 (hypothetical protein SDRG_05613 [Saprolegnia diclina VS20] >EQC36779.1 hypothetical protein SDRG_05613 [Saprolegnia diclina VS20])

HSP 1 Score: 151.8 bits (382), Expect = 5.100e-33
Identity = 108/333 (32.43%), Postives = 162/333 (48.65%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTF---GTGQGLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVLALCGLKVETRILPGAWEEEKIHARGEEEKREGGELVPFFPGLGHAATFTDVRGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKETTALLCHASLS-PSLPQYFPLYHAFLHVFSAQSSAMPSDFFFNDEEGEMVKGKESFLQPCL 330
            +P GSEFG+D +  +    F+GV  +P GLHF+ +   G   G+RQGFF+H++   +V ++ W    EEL+   T  R+    NL +A+   +L+  LGAYP++   + WR LS+YI+ +VL  CG+ +   I+PG  +    +        E   L P+FP     A FT ++     K AL  + AEVT +H+D S+ L  VL + +S                               + WK LLGE QL+F+LFL + S+  L  WK+   LLC +  +  S+P  F  +   +H    Q  A     FF DE  +     E+FLQ  L
Sbjct:   12 VPVGSEFGVDYEAFRTAERFQGVKLLPTGLHFVFYASSGDQDGIRQGFFIHVNAG-DVTLRKWSHETEELLPL-TDARDA--ENLTRAVHGFQLDGNLGAYPQK-HAKTWRRLSKYISANVLRRCGITLGATIMPGDPDVMSTN--------EPSTLTPYFPNTAQTARFTPLK-----KPALSRSAAEVTLFHVDSSEHLHHVLAEHFS-------------------------------NDWKELLGELQLSFVLFLLISSLDALTQWKQMVWLLCSSEAAVESMPDLFIAFLKLMHTHLDQVGAE----FFQDEVAQ-----ENFLQASL 286          
BLAST of NO19G01560 vs. NCBI_GenBank
Match: XP_012196471.1 (hypothetical protein SPRG_02508 [Saprolegnia parasitica CBS 223.65] >KDO32815.1 hypothetical protein SPRG_02508 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 151.0 bits (380), Expect = 8.700e-33
Identity = 106/333 (31.83%), Postives = 165/333 (49.55%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTF---GTGQGLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVLALCGLKVETRILPGAWEEEKIHARGEEEKREGGELVPFFPGLGHAATFTDVRGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKETTALLCHASLS-PSLPQYFPLYHAFLHVFSAQSSAMPSDFFFNDEEGEMVKGKESFLQPCL 330
            +P GSEFG+D +  +    F+GV  +P GLHF+ +   G   G+RQGFF+H++   +V ++ W    EEL+   T  R+    NL +A++  +L+  LGAYP++   + WR LS+YI+ +VL  CG+ +   I+PG  +    +        E   L P+FP     A FT +R     K AL  + AEVT +H+D S+ LE++L + ++                               + WK L+GE QL+F+LFL + S+  L  WK+   LLC +  +  ++P  F  +   +H    Q  A     FF DE  +     E+FLQ  L
Sbjct:   12 VPVGSEFGVDYEAFRTAERFQGVKLLPAGLHFVFYASSGDQDGIRQGFFMHVNAG-DVQLRKWSHETEELLPL-TDARDA--ENLTRAVRGFQLDGNLGAYPQK-HAKTWRRLSKYISANVLRRCGITLGATIMPGDPDVMSTN--------EPSTLTPYFPNTAQTARFTPLR-----KPALSRSAAEVTMFHVDSSEHLEQLLAEHFN-------------------------------NDWKELVGELQLSFVLFLLISSLDALTQWKQMVWLLCSSEAAVETMPDLFIAFLKLMHTHLEQVGAE----FFQDEVAQ-----ENFLQASL 286          
BLAST of NO19G01560 vs. NCBI_GenBank
Match: OQR81861.1 (CTP synthase [Thraustotheca clavata])

HSP 1 Score: 149.4 bits (376), Expect = 2.500e-32
Identity = 106/332 (31.93%), Postives = 161/332 (48.49%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTF---GTGQGLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVLALCGLKVETRILPGAWEEEKIHARGEEEKREGGELVPFFPGLGHAATFTDVRGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKETTALLCHASLSPSLPQYFPLYHAFLHVFSAQSSAMPSDFFFNDEEGEMVKGKESFLQPCL 330
            +P GSEFGID +  +    F+GV  +P GLHF+ +   G   G+RQGFF+ ++   +VL + W    EEL+          + NL  A++  +L+  LGAYP++   ++W+ LS+YIT  VL  CG+ +   I+PG  +             E   L P+FP     A FT +   K+PK  L  +  E+T YHLD S+ L  +LRD ++                               + W  LLGE QL+F+LFL + S   L  WK+   LLC  S   ++  +  L+ +FL +  +Q   + +D FF DE  +     E+F+Q  L
Sbjct: 1036 VPLGSEFGIDYEAFRTAERFQGVKLIPTGLHFVFYASSGEHDGIRQGFFIEVNHG-DVLTRKWSNETEELLPMQDAC---DIANLTNAVKSFQLDGNLGAYPQK-HFKMWQRLSKYITPSVLKRCGITIGATIMPGDPD--------VMSTEEPATLSPYFPNTAQTARFTPL---KKPK--LIRSAHEITAYHLDSSEHLLRLLRDHFN-------------------------------NDWHELLGELQLSFVLFLLISSFEALNQWKQFVWLLC--SCEAAVVSHPQLFSSFLQIMQSQLEMVGAD-FFQDEVAQ-----ENFIQTSL 1310          
BLAST of NO19G01560 vs. NCBI_GenBank
Match: XP_009821833.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV89433.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 145.6 bits (366), Expect = 3.700e-31
Identity = 95/275 (34.55%), Postives = 141/275 (51.27%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTFGT------GQGLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVLALCGLKVETRILPGAWEEEKIHARGEEEKREGGELVPFFPGLGHAATFTDVRGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKE 270
            +P GSEFG+D +  +    FRGV  +P GLHF+ + +      G G+RQGFFV I +P +V++++W    EEL+      RE  + NL +A+   +L+  LGAYP++   + WR LS+YIT++VLA CGL V   I PG  +   +      E  +   L PFFP +   A FT +   K+P +    +  ++T YH+D S+ LE +L   +                                + W ALLGE QL+F+LFL L S+  L  WK+
Sbjct:   15 VPVGSEFGVDYEAFRTAEKFRGVKLIPSGLHFVFYASNGEHDNGNGIRQGFFVEI-KPNDVVIRTWSSDTEELVPM---TREADVENLTRAVHGFQLDGNLGAYPQK-HAKTWRRLSKYITKEVLAQCGLTVGGTISPGDPDTLSL------ESNDLTTLKPFFPDVAQVARFTPL---KKP-STTQRSAGDLTLYHVDSSEHLEWLLSTHF-------------------------------HNDWHALLGELQLSFVLFLLLSSLDALHQWKQ 243          
BLAST of NO19G01560 vs. NCBI_GenBank
Match: OQR99103.1 (hypothetical protein ACHHYP_07497 [Achlya hypogyna])

HSP 1 Score: 145.2 bits (365), Expect = 4.800e-31
Identity = 107/334 (32.04%), Postives = 164/334 (49.10%), Query Frame = 0
Query:    1 MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTF---GTGQGLRQGFFVHISRPYEVLVKSWDPTEEELIEQGTGLREG-SMHNLLQALQRGELNKQLGAYPEREQGRLWRDLSEYITEDVLALCGLKVETRILPGAWEEEKIHARGEEEKREGGELVPFFPGLGHAATFTDVRGAKRPKNALDMTPAEVTRYHLDRSQLLEEVLRDVYSKIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAWKALLGEYQLAFLLFLNLYSMAGLKHWKETTALLCHASLS-PSLPQYFPLYHAFLHVFSAQSSAMPSDFFFNDEEGEMVKGKESFLQPCL 330
            +P G+EFGID +  +    F+GV  +P+GLHF+ +   G   G+RQGFF+ + +  +VL++ W    EE++     L++     NL +A++  +L+  LGAYP++   + WR LS+YI+  VL  CG+ + T ++PG   +  I +  E      G +  +FP     A FT ++     K  L  + AEVT+YHLD S+ L  +L   Y                                + WK LLGE QLAF+LFL + S+  L+ WK+   LLC +  +  + P+ F  + A +H    Q  A     FF DE  E      +FLQ  L
Sbjct:   16 VPVGTEFGIDYEAFRTAERFQGVKLLPVGLHFVFYASTGEHDGIRQGFFIDV-QAGDVLLRKWSNDTEEILP----LQDARDAENLTRAVRGFQLDGNLGAYPQK-HCKTWRRLSKYISHSVLQRCGVSLGTTLMPG---DPDIMSTDEP-----GTVAAYFPNTAQTARFTSLK-----KPTLARSAAEVTQYHLDSSEHLAFLLETHYG-------------------------------NDWKELLGELQLAFVLFLFISSLDALQQWKQLVWLLCSSEAAVATKPELFTSFLALMHAHLDQVGAE----FFQDEVAE-----HNFLQASL 290          
The following BLAST results are available for this feature:
BLAST of NO19G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002899360.17.100e-3531.63conserved hypothetical protein [Phytophthora infes... [more]
CBN75489.12.700e-3430.22conserved unknown protein [Ectocarpus siliculosus][more]
GAY02370.13.500e-3432.54Hypothetical protein PINS_010215 [Pythium insidios... [more]
OWZ13435.14.600e-3431.58hypothetical protein PHMEG_00013239 [Phytophthora ... [more]
XP_009821832.16.000e-3433.65hypothetical protein H257_00718 [Aphanomyces astac... [more]
XP_008609560.15.100e-3332.43hypothetical protein SDRG_05613 [Saprolegnia dicli... [more]
XP_012196471.18.700e-3331.83hypothetical protein SPRG_02508 [Saprolegnia paras... [more]
OQR81861.12.500e-3231.93CTP synthase [Thraustotheca clavata][more]
XP_009821833.13.700e-3134.55hypothetical protein, variant [Aphanomyces astaci]... [more]
OQR99103.14.800e-3132.04hypothetical protein ACHHYP_07497 [Achlya hypogyna... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004493NSK004493Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01560.1NO19G01560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558656gene_7554Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100191g15gene6797Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01560.1NO19G01560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01560 ID=NO19G01560|Name=NO19G01560|organism=Nannochloropsis oceanica|type=gene|length=1317bp
ATGCCCTCCGGGAGTGAGTTTGGAATCGACATGCAAATAAACCAGGTCGG
CCCCAACTTTCGAGGCGTTGCGGGCGTGCCTTTAGGCTTGCATTTCCTGA
CGTTCGGGACAGGCCAAGGCCTCCGCCAAGGCTTTTTCGTTCACATTTCC
CGTCCGTATGAAGTCCTCGTCAAATCATGGGACCCAACAGAAGAAGAATT
AATTGAGCAAGGAACAGGACTACGGGAAGGGTCTATGCATAATCTACTCC
AGGCCCTGCAAAGGGGTGAATTGAACAAGCAATTAGGGGCATACCCTGAA
AGGGAGCAGGGGAGGCTTTGGCGGGATCTGAGCGAGTACATAACAGAGGA
CGTCTTGGCACTATGTGGTTTGAAAGTGGAAACGCGTATCTTACCAGGAG
CTTGGGAAGAGGAGAAAATACATGCTCGAGGCGAAGAAGAGAAGAGGGAA
GGAGGGGAGTTGGTGCCGTTCTTTCCAGGGTTGGGCCACGCGGCCACTTT
CACGGATGTACGAGGCGCGAAACGGCCAAAGAATGCATTGGACATGACAC
CGGCAGAAGTGACACGATACCACTTGGATCGCTCTCAACTGTTGGAGGAA
GTGTTGAGGGATGTGTATAGTAAAATAGGCTCGTCCTCATCCTCGGCCTC
CCTCCTTCCCTCGTCCTTCTCGTCCTCCTCGTCCTCATCCTCTTCTCCTT
CTTTTCCTTCTTCGTCAGCCTGGAAAGCCCTTCTAGGCGAGTATCAGCTC
GCCTTCCTTCTCTTCCTTAACCTGTACTCCATGGCCGGCCTCAAGCACTG
GAAAGAAACCACCGCCCTGCTCTGCCACGCTTCCCTCTCTCCCTCCCTCC
CTCAATACTTCCCCCTCTATCACGCCTTCCTCCATGTCTTCTCGGCCCAG
TCTTCTGCTATGCCTTCGGATTTCTTTTTTAATGACGAAGAAGGAGAGAT
GGTGAAAGGCAAAGAGAGTTTCCTCCAGCCTTGCCTGAGGCAGTTGTTAC
GGAATGTGAGGGAGGGAGGGAGGGAGGGAGAAAGGGAGGGCAGCGGCTTG
CTGGAAGAAGTTGAGCTGTTCGCACGGAAGATGGAAGCGAGGTTCCTGGG
GTTTAATCTAAAGGCGAGGAGGGAGGGAGCGAGAAAGGACGAGGTAGAGG
AAGAGGAGGAGGAGGAGGATGGGCCGTTGGTGGTGCCGTGGGAGGAGGTG
GAGAGGGCGATGCTTCGGACGACGATGACGGAGGACTGGGAGGAGGAAGA
GAGGGAAGAAATAGGGAAGAATCGGGTTCTCGAGACGATTCAGGAACAGG
AGGGGGTGGAGGATTAG
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protein sequence of NO19G01560.1

>NO19G01560.1-protein ID=NO19G01560.1-protein|Name=NO19G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=439bp
MPSGSEFGIDMQINQVGPNFRGVAGVPLGLHFLTFGTGQGLRQGFFVHIS
RPYEVLVKSWDPTEEELIEQGTGLREGSMHNLLQALQRGELNKQLGAYPE
REQGRLWRDLSEYITEDVLALCGLKVETRILPGAWEEEKIHARGEEEKRE
GGELVPFFPGLGHAATFTDVRGAKRPKNALDMTPAEVTRYHLDRSQLLEE
VLRDVYSKIGSSSSSASLLPSSFSSSSSSSSSPSFPSSSAWKALLGEYQL
AFLLFLNLYSMAGLKHWKETTALLCHASLSPSLPQYFPLYHAFLHVFSAQ
SSAMPSDFFFNDEEGEMVKGKESFLQPCLRQLLRNVREGGREGEREGSGL
LEEVELFARKMEARFLGFNLKARREGARKDEVEEEEEEEDGPLVVPWEEV
ERAMLRTTMTEDWEEEEREEIGKNRVLETIQEQEGVED*
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Synonyms
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