NO19G01550, NO19G01550 (gene) Nannochloropsis oceanica

Overview
NameNO19G01550
Unique NameNO19G01550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length645
Alignment locationchr19:470415..471059 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:470415..471059 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01550.1NO19G01550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599149gene_7553Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01550.1NO19G01550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01550 ID=NO19G01550|Name=NO19G01550|organism=Nannochloropsis oceanica|type=gene|length=645bp
ATGGAGGCCGAGGACGAAGAAGGCGATGCCATGATGGTCAGCAGCAGGAA
CAGCAGTGAAACCAGTCCACCCACAAAGAGCTGCAGCAACAGCAGCAGTA
GCAGCAACAACAAACGTCGTTCAGGGCAGGATTATGAAAATCCCGATTTT
CTCGAGCATCTGCTGCATGTCACAGGCATCACGGGCACGGCCAGCAAGCG
GCGGATGCTAAAACACTCTCCGTCCTCCCCCCTCTTCCTTCGAAGCACCG
ACCAAAATGCTCCCGGCGTGGGCTTTTGCAACAATTGTACGACGAATTTC
AACAATAATGTCAATGCCTTCTATTGGTCCTTGCCGTTTCGGCCCACACC
TCTCCAACCAAGCCCACCATCACCACCAATCTCCTCCCCCTTGCTTTTCC
TTCAGTCGCCTCATTACGACGAGGTCATGAATACAATTATGAGCGAAGGC
GGGAGAAAAGAAGTAGGGATAGGAAGAGGAGGAGGAGGAATGGCCAGCAT
GGCGTTATGCGCTCTCCAACGGCAGCAGCAGCAGGAGGAACAACAACATC
AGCATTACCAGCAGCAGAAGCACCAGCATCAGCATCAGCATCAGCATCAG
CATCAGCAACTACTACTACAGCAACTACAAAATTCTGACGGTTGA
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protein sequence of NO19G01550.1

>NO19G01550.1-protein ID=NO19G01550.1-protein|Name=NO19G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=215bp
MEAEDEEGDAMMVSSRNSSETSPPTKSCSNSSSSSNNKRRSGQDYENPDF
LEHLLHVTGITGTASKRRMLKHSPSSPLFLRSTDQNAPGVGFCNNCTTNF
NNNVNAFYWSLPFRPTPLQPSPPSPPISSPLLFLQSPHYDEVMNTIMSEG
GRKEVGIGRGGGGMASMALCALQRQQQQEEQQHQHYQQQKHQHQHQHQHQ
HQQLLLQQLQNSDG*
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Synonyms
Publications