NO19G01460, NO19G01460 (gene) Nannochloropsis oceanica

Overview
NameNO19G01460
Unique NameNO19G01460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2391
Alignment locationchr19:445979..448369 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:445979..448369 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G01460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL013nonsL013Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR037ngnoR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004464NSK004464Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01460.1NO19G01460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01460.1NO19G01460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01460 ID=NO19G01460|Name=NO19G01460|organism=Nannochloropsis oceanica|type=gene|length=2391bp
ATGGAGGCCGACGAGAAAGACAGCGCCGCCTCTACAGGCAGCAATAATAG
CAGCAACCAGGATCATTACTGCAACAGTACCAGGGCACGCAGACGGCGAA
TTTATGGGGTGGATCGTCCCGTCCTAGGATATCGAAACGTAGCAGCCTAC
GTCCACGCACGGGAAGGGCCAGACGGACGATTTGGCCCACCTCCCGGCAG
ACAGCGACTAGGAGGGGTTGCTTATTCACAAGCTACCTTGTTGCAGCAAT
GGCAACCAGATCTTATGCTCGACATGGACACCATGGTGGAGTTGCTGAAG
GAGGATTGGGAAGAACGGCCAGCTCGACGGAGGGAGGGCATGGAGAGGCA
AGGGAATGCGTTATGGATCCCCTTCTTTCCCCTCGCCTCCAACCAGCAGC
ACCAACAACAACATTTACTGGTGCATGCGGGGGGGGCTATCATGGACCGG
TTGTATTTTTCGTTGTTGGACGAGAGAAGGAGCTCAATCAGGAGTGGTGG
CGGCCATGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGA
GAATACGAAATAAAAGTAGTAGCAGTAGATTTCATCCTCCGACATGCACG
GTGCATGGAGGAGGGATGTGGGTATCGGGAGAAGTAGGGGGTATACGCCA
AATTGCACCTTTGAATCAATATGAGCCTGCTGTTACCGCTGCTGCCGCTG
CTACTGCTCCTCCGACGTGCTTCATCCGGGGGACCACTGAAGCAGCTCTT
TTTCAGCTACGACCATTAGAGGAGGAGGAGCAACAGTGGTCCTACCCCTT
TCTCCTCACCCCTCTCCAAAAGTGTCAGTTTCAGCATCCTCTGCTTGACA
TAGCCACACGCCCTTCCTCCCCCCACCGTTGTGCCTTCCTAACCGACCGT
CTCGAGGTATTCGAATGGACAAGCGCTGCTGGTGCTACCCGTATCAATTA
CCAACTCTCTCTTCCTTCCTTGCTTTCTCCCCCTTCGGTTTCTGCGTCGA
GGTTGATGTGGGGGGCGCATCCCCGCTCGCTGTGGTTGAGTATAGATGAT
GCTGGTGCTGCTGCTTCCTCTGCAGCTGGTGGCACTTCCCTGTACCACCT
TGATTTGAGACAAAAGATAGCGGCAGGTAGATTGAATCTAGGAGGAAGAG
GAAGAAGAGTAGATGGAGGAGGTGGTGGGGGAGGAGGAAGAGGACAAGGA
GGGAGGAGGAGGATCACTGCTAAAGGTCATCTGCTCTCCACGGGTCGGTT
CCCCTCTGGACTTTTAGGGCCCGAGAAGCCCTTGGTAGAAGGAGGGAGGG
AGGGGGGGAGGGAAGGAGGGAGGGTTGGGGCAATGGAGCGTCATCCCACC
GACGAAAATTTGTTGTTTGTGAGTGTGGCGGAAGCTCTCCTTCTGTTGGA
CTTGAGACAACCGAGCACCCCTCTAGCGGTGCTACCACAAGCTGACTCAT
GCCATCTCCTTGCTGTTGGTCTAGAGCAGCAGCAGCAGCAGCAGCAACAA
CAACAAAAGACGTGGGTGACCGCGGGATGTCGAACAATGCCCCGGCTTCA
TTTTCATTTCGAGGAGGAAGGAGGCGGGAAGGAGGGCGGGACAGCAGTCT
CAGGGAGGGGGATCGTGGAGGAGTGGTGCTCGGGAGTGGACTGGTTGACA
AGAGGAGGGAGCGAGGGAAAGAGGGCGGGTTTGAGGTATGAGACTGGCAC
GTTCGTAAATTGGGATCTCACTCCCGAGAGAGGACAGTCAGTCTGGCTGG
CGGGGTTGGGGGCCATCCCTTCCTCCCTCCCTTCCTCGTCCTCGTCCTCG
TCCTCATCTTTTTACCTGCCGTACCTGACGTCATTGGGCGATCTATACAT
GCAGCGGGTGTTAGTGGGAGCGGGAAAGGGAGGGAGGGGAGAGGGGGGGG
AGGGATGGCGTACGTGGGAGACGAGGGATATGCCTTGTGGAGTTTCTCGT
CACCTTCGCGATGATGGAGGGGAGGTGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAAAAGGAGGAGGAGGAGGAGGAGCAGCAGCAGCAGCAGCCACAAC
AGCAACAACAGCAACAACAGCAGCACCAGCAAGAGATAAATAGGAGAAAA
CTGCAATTATCTTCCCCTTCTATCCCTTCCTTGCCTTCTTCCGCTTTTTT
CCAACCCTACGCTAAAGACGATCTGAAGGACTATCAAGTTGCTGCTCTCG
ACCCTCCACACACTGCCTTCGGCACTGACCTTCTCGCTGCTCCTGTGGAT
ACCACCTTTAGCAGCAGTAGCAGCAACTGTAGTAGCCGCAGAGTGGCGAC
AGATGTAAATAGCAAAGCGCTAGCTCGGAGGACGAGGGAGGGGGGAAGGA
GGGGTTGCATCGCGTGGTTAGAGAGCAGTGGGGAGAGCTAG
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protein sequence of NO19G01460.1

>NO19G01460.1-protein ID=NO19G01460.1-protein|Name=NO19G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=797bp
MEADEKDSAASTGSNNSSNQDHYCNSTRARRRRIYGVDRPVLGYRNVAAY
VHAREGPDGRFGPPPGRQRLGGVAYSQATLLQQWQPDLMLDMDTMVELLK
EDWEERPARRREGMERQGNALWIPFFPLASNQQHQQQHLLVHAGGAIMDR
LYFSLLDERRSSIRSGGGHEEEEEEEEEEEEEGRIRNKSSSSRFHPPTCT
VHGGGMWVSGEVGGIRQIAPLNQYEPAVTAAAAATAPPTCFIRGTTEAAL
FQLRPLEEEEQQWSYPFLLTPLQKCQFQHPLLDIATRPSSPHRCAFLTDR
LEVFEWTSAAGATRINYQLSLPSLLSPPSVSASRLMWGAHPRSLWLSIDD
AGAAASSAAGGTSLYHLDLRQKIAAGRLNLGGRGRRVDGGGGGGGGRGQG
GRRRITAKGHLLSTGRFPSGLLGPEKPLVEGGREGGREGGRVGAMERHPT
DENLLFVSVAEALLLLDLRQPSTPLAVLPQADSCHLLAVGLEQQQQQQQQ
QQKTWVTAGCRTMPRLHFHFEEEGGGKEGGTAVSGRGIVEEWCSGVDWLT
RGGSEGKRAGLRYETGTFVNWDLTPERGQSVWLAGLGAIPSSLPSSSSSS
SSSFYLPYLTSLGDLYMQRVLVGAGKGGRGEGGEGWRTWETRDMPCGVSR
HLRDDGGEVEEEEEEEEEEKEEEEEEQQQQQPQQQQQQQQQHQQEINRRK
LQLSSPSIPSLPSSAFFQPYAKDDLKDYQVAALDPPHTAFGTDLLAAPVD
TTFSSSSSNCSSRRVATDVNSKALARRTREGGRRGCIAWLESSGES*
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Synonyms
Publications