NO19G01370, NO19G01370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01370 vs. NCBI_GenBank
Match: EWM23642.1 (electron transfer flavoprotein subunit beta [Nannochloropsis gaditana]) HSP 1 Score: 428.7 bits (1101), Expect = 1.700e-116 Identity = 222/252 (88.10%), Postives = 241/252 (95.63%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAK 336 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKK ATEIVAVSVG KQAQETLRTALAMGVDR IH+ET+LR DQE+QPLAVAK+L+KLV+KEKAGL+ILGKQSIDGD AQTAPMLAALLGWPQATF+AGVEPVD NKAL+VERETDTGSEVLK+NLPAV+STDLRLNTPRYATIPNIMKAKKKPMELL+ E LG+D+TPK +V+SVA+P KRK GIMVE+VDEL+DKLKNEAK Sbjct: 90 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKFATEIVAVSVGTKQAQETLRTALAMGVDRGIHVETALRADQELQPLAVAKMLAKLVDKEKAGLVILGKQSIDGDNAQTAPMLAALLGWPQATFAAGVEPVDENKALKVERETDTGSEVLKVNLPAVLSTDLRLNTPRYATIPNIMKAKKKPMELLSPEKLGVDVTPKTSVISVAEPGKRKAGIMVESVDELLDKLKNEAK 341
BLAST of NO19G01370 vs. NCBI_GenBank
Match: CBJ27362.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 329.7 bits (844), Expect = 1.100e-86 Identity = 163/256 (63.67%), Postives = 212/256 (82.81%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIET--SLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338 R++VGVKRV+DYAVKVR+ DK GVEL NVK SMNPFCE A+EEAV+LKE K A+E++AVS+GPK A++TLRTALAMG DR +H+ T ++R DQ ++PLAVA +L K+VE++K L++LGKQSIDGD +QT PMLA +LGWPQATF+A V V+ K L+VERETDTG++VL + LPAV++ DLRLN PRYAT+PNIMKAKKK +++LT+ +G+DL P+ TV+ V PP R+GG++VE+VDEL+DKLK EA V+ Sbjct: 2 RVMVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVKLKETKAASEVIAVSIGPKAAKDTLRTALAMGADRGVHVMTDDAVRTDQGLEPLAVAGLLKKVVEEQKVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKVTVVEAGKQLEVERETDTGTQVLSVPLPAVVTADLRLNEPRYATLPNIMKAKKKTVDVLTAADMGVDLKPRTTVIEVVPPPVRQGGVIVESVDELIDKLKTEAGVL 257
BLAST of NO19G01370 vs. NCBI_GenBank
Match: GAY00371.1 (electron transfer flavoprotein subunit beta [Pythium insidiosum]) HSP 1 Score: 324.7 bits (831), Expect = 3.400e-85 Identity = 173/254 (68.11%), Postives = 208/254 (81.89%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338 +ILV VKRV+DYAVK+RVA KGVELNNVK SMNPFCEIAVEEA+RLKEKKVA EIVAVS+GPKQ+QET+RTALAMG DR IHIET +R DQE+QPLAVAK+L ++V KE L+I GKQSID D AQT P+LA LL W QATF++ V V+G +AL V RETD+G E +K+ LPAV++ DLRLN PRYAT+PNIMKAKKK +++L +++LG+DL P+I V+ V +P RK GI V VD+LVDKLKNEA VV Sbjct: 2 KILVPVKRVVDYAVKIRVA--PKGVELNNVKMSMNPFCEIAVEEAIRLKEKKVAKEIVAVSIGPKQSQETIRTALAMGADRGIHIETDMRTDQELQPLAVAKLLKEIVAKESPNLVICGKQSIDADAAQTGPLLAGLLDWSQATFASEV-AVEG-EALTVTRETDSGVETIKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIDVLAADSLGVDLAPRIEVVEVKEPAARKAGIKVADVDQLVDKLKNEAGVV 251
BLAST of NO19G01370 vs. NCBI_GenBank
Match: XP_009038470.1 (hypothetical protein AURANDRAFT_28553 [Aureococcus anophagefferens] >EGB06720.1 hypothetical protein AURANDRAFT_28553 [Aureococcus anophagefferens]) HSP 1 Score: 323.9 bits (829), Expect = 5.800e-85 Identity = 167/254 (65.75%), Postives = 201/254 (79.13%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338 R+LVGVKRVIDYAV+VRVA DK GVEL NVK SMNPFCEIA EEA++LKEKKVA+E+VAVS+GPKQAQETLR+ALAMG DR+IH+ T LR DQE+ PLAVA++L+K+V E+ L+I+GKQSIDGD T PMLA LLGW QATF+A + +VERETDTG+EV+K+ LP V++ DLRLNTPRY +PNIMKAKKKP+E + G+DL P I V +VA P R GI V++VD LVDKLKNEA V+ Sbjct: 2 RVLVGVKRVIDYAVRVRVAGDKSGVELANVKMSMNPFCEIACEEAIQLKEKKVASEVVAVSIGPKQAQETLRSALAMGCDRAIHVATDLRLDQELNPLAVARLLAKVVADEQPDLVIVGKQSIDGDNGTTGPMLAELLGWSQATFAAKFDVAGDGATAEVERETDTGTEVVKVKLPTVLTADLRLNTPRYPKLPNIMKAKKKPLESKDAADYGVDLAPSIVVEAVASPEARAAGITVDSVDTLVDKLKNEAAVI 255
BLAST of NO19G01370 vs. NCBI_GenBank
Match: POM60116.1 (Electron transfer flavoprotein subunit beta [Phytophthora palmivora var. palmivora]) HSP 1 Score: 322.0 bits (824), Expect = 2.200e-84 Identity = 170/254 (66.93%), Postives = 206/254 (81.10%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338 ++LV VKRV+DYAVK+RV + KGV+L NVK SMNPFCEIAVEEA+RLKEKK+ATE+VAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE+ L+I GKQSID D AQT PMLA LL W Q TF++ V VDG+ A+ V RETD+G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DL P+I V+ V DP RK GI V +VDELVDKLKNEA V+ Sbjct: 2 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKLATEVVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEIVAKEEPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASEV-AVDGD-AVNVTRETDSGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLAPRIDVVEVKDPAARKAGIKVASVDELVDKLKNEAGVI 251
BLAST of NO19G01370 vs. NCBI_GenBank
Match: XP_002902119.1 (electron transfer flavoprotein subunit beta [Phytophthora infestans T30-4] >AAN31477.1 electron transfer flavoprotein beta subunit [Phytophthora infestans] >EEY56791.1 electron transfer flavoprotein subunit beta [Phytophthora infestans T30-4]) HSP 1 Score: 320.9 bits (821), Expect = 4.900e-84 Identity = 170/254 (66.93%), Postives = 205/254 (80.71%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338 ++LV VKRV+DYAVK+RV + KGV+L NVK SMNPFCEIAVEEA+RLKEKKVA+EIVAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE L+I GKQSID D AQT PMLA LL W Q TF++ V VDG+ A+ + RETD+G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DL P+I V+ V DP RK GI V +VDELVDKLKNEA V+ Sbjct: 2 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVASEIVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEVVAKEGPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASDV-AVDGD-AVNITRETDSGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLAPRIDVVEVKDPASRKAGIKVASVDELVDKLKNEAGVI 251
BLAST of NO19G01370 vs. NCBI_GenBank
Match: XP_008890143.1 (hypothetical protein PPTG_00500 [Phytophthora parasitica INRA-310] >ETI57030.1 hypothetical protein F443_00609 [Phytophthora parasitica P1569] >ETK96803.1 hypothetical protein L915_00565 [Phytophthora parasitica] >ETL50151.1 hypothetical protein L916_00567 [Phytophthora parasitica] >ETM56472.1 hypothetical protein L914_00561 [Phytophthora parasitica] >ETN24039.1 hypothetical protein PPTG_00500 [Phytophthora parasitica INRA-310] >ETO85782.1 hypothetical protein F444_00600 [Phytophthora parasitica P1976] >ETP26809.1 hypothetical protein F441_00598 [Phytophthora parasitica CJ01A1] >ETP54777.1 hypothetical protein F442_00592 [Phytophthora parasitica P10297] >KUF76244.1 Electron transfer flavoprotein beta subunit [Phytophthora nicotianae] >KUF88627.1 Electron transfer flavoprotein beta subunit [Phytophthora nicotianae]) HSP 1 Score: 320.9 bits (821), Expect = 4.900e-84 Identity = 171/254 (67.32%), Postives = 204/254 (80.31%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338 ++LV VKRV+DYAVK+RV + KGV+L NVK SMNPFCEIAVEEA+RLKEKKVA+EIVAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE L+I GKQSID D AQT PMLA LL W Q TF++ V V+G+ A+ V RETD G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DLTP+I V+ V DP RK GI V VDELVDKLKNEA V+ Sbjct: 2 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVASEIVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEVVAKEDPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASEV-AVEGD-AVNVTRETDAGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLTPRIDVVEVKDPASRKAGIKVANVDELVDKLKNEAGVI 251
BLAST of NO19G01370 vs. NCBI_GenBank
Match: ETM03217.1 (hypothetical protein L917_00540, partial [Phytophthora parasitica]) HSP 1 Score: 320.9 bits (821), Expect = 4.900e-84 Identity = 171/254 (67.32%), Postives = 204/254 (80.31%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338 ++LV VKRV+DYAVK+RV + KGV+L NVK SMNPFCEIAVEEA+RLKEKKVA+EIVAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE L+I GKQSID D AQT PMLA LL W Q TF++ V V+G+ A+ V RETD G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DLTP+I V+ V DP RK GI V VDELVDKLKNEA V+ Sbjct: 39 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVASEIVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEVVAKEDPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASEV-AVEGD-AVNVTRETDAGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLTPRIDVVEVKDPASRKAGIKVANVDELVDKLKNEAGVI 288
BLAST of NO19G01370 vs. NCBI_GenBank
Match: ETM56484.1 (hypothetical protein L914_00559, partial [Phytophthora parasitica]) HSP 1 Score: 320.9 bits (821), Expect = 4.900e-84 Identity = 171/254 (67.32%), Postives = 204/254 (80.31%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338 ++LV VKRV+DYAVK+RV + KGV+L NVK SMNPFCEIAVEEA+RLKEKKVA+EIVAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE L+I GKQSID D AQT PMLA LL W Q TF++ V V+G+ A+ V RETD G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DLTP+I V+ V DP RK GI V VDELVDKLKNEA V+ Sbjct: 41 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVASEIVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEVVAKEDPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASEV-AVEGD-AVNVTRETDAGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLTPRIDVVEVKDPASRKAGIKVANVDELVDKLKNEAGVI 290
BLAST of NO19G01370 vs. NCBI_GenBank
Match: XP_024571708.1 (electron transfer flavoprotein subunit beta [Plasmopara halstedii] >CEG35339.1 electron transfer flavoprotein subunit beta [Plasmopara halstedii]) HSP 1 Score: 315.5 bits (807), Expect = 2.100e-82 Identity = 166/254 (65.35%), Postives = 202/254 (79.53%), Query Frame = 0 Query: 84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338 ++LV VKRV+DYAVK+RV + GV+L NVK SMNPFCEIAVEEA+RLKEKKVATE+VAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE L+I GKQSID D AQT P+LA LL W Q TF++ V ++G A V RETD G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E+L +E+ G+DLTP+I ++ V +P RK GI V +VDELVDKLKNE V+ Sbjct: 2 KVLVPVKRVVDYAVKIRV--EPSGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVATEVVAVSIGPKQSQETLRTALAMGADRGIHISTDMRTDQELQPLAVAKLLKEIVIKEDPKLVICGKQSIDADAAQTGPLLAGLLDWSQGTFASKV-AIEGESA-HVTRETDAGIETLKLCLPAVVTADLRLNEPRYATLPNIMKAKKKKIEILDAESFGVDLTPRIEIVEVKEPASRKAGIKVTSVDELVDKLKNEVGVI 251 The following BLAST results are available for this feature:
BLAST of NO19G01370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01370 ID=NO19G01370|Name=NO19G01370|organism=Nannochloropsis oceanica|type=gene|length=1724bpback to top protein sequence of NO19G01370.1 >NO19G01370.1-protein ID=NO19G01370.1-protein|Name=NO19G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bpback to top Synonyms
Publications
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