NO19G01360, NO19G01360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_020434396.1 (cellular retinaldehyde-binding/triple function domain-containing protein [Heterostelium album PN500] >EFA82279.1 cellular retinaldehyde-binding/triple function domain-containing protein [Heterostelium album PN500]) HSP 1 Score: 100.9 bits (250), Expect = 5.700e-18 Identity = 51/162 (31.48%), Postives = 88/162 (54.32%), Query Frame = 0 Query: 75 VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAF 237 +T+E+ E++ G+ +FHGSDK+GRPV HD RDL E R Y +E + +P ++ T+I+D + KN D ++ ++ F+ YPE LA+ +I + +WN +LD S+I V T + L +Y+ ++LL + GG++ + + Sbjct: 79 ITEETVDNEMKAGKSFFHGSDKEGRPVCIVRTRKHDSSQRDLEEAQRYCVYVMETGKALLPPGIETCTLIFDMSSFSTKNMDYPLVKFMVDMFQKYYPESLARCLILNAPWVFMGVWNIIKHWLDPYTVSKISFVKTRQ-LIDYIPADQLLMAYGGESKFKY 239
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_012756286.1 (hypothetical protein SAMD00019534_043270, partial [Acytostelium subglobosum LB1] >GAM21152.1 hypothetical protein SAMD00019534_043270, partial [Acytostelium subglobosum LB1]) HSP 1 Score: 100.1 bits (248), Expect = 9.700e-18 Identity = 58/196 (29.59%), Postives = 96/196 (48.98%), Query Frame = 0 Query: 46 RFLMGFHQKADKAISAYEAHLKWRAENLP-----VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAF 237 RFL K + + + + L +RA +T+ S EL+ G+ +FHGSDK+GRP+ HD RDL E R + Y +E +P+ ++ T+I+D + KN D + + F+ YPE L++ I + +W+ +LD S+I V + + L EY+ E+LL S GG + + + Sbjct: 45 RFLRARKWKLEDSYNMLQEALSFRASFQDKGVDFITESSVENELKCGKSFFHGSDKEGRPICIVRTRKHDSSQRDLDEAQRYIVYVMETGKELLPEGIETCTLIFDMSSFSTKNMDYPLCKFMVEMFQKYYPESLSKCFILNAPWMFMGIWSIIKHWLDPYTVSKINFVKSKQ-LLEYIHPEQLLTSYGGASDFKY 239
BLAST of NO19G01360 vs. NCBI_GenBank
Match: KIM91770.1 (hypothetical protein PILCRDRAFT_138851 [Piloderma croceum F 1598]) HSP 1 Score: 97.4 bits (241), Expect = 6.300e-17 Identity = 59/209 (28.23%), Postives = 94/209 (44.98%), Query Frame = 0 Query: 46 RFLMGFHQKADKAISAYEAHLKWRAENLPVTK-----ESCLT--------ELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAFDPSEV 242 RFL +A++ + +KWR E L V K E L +++ + YFHGSDK+ RPV Y + H+P+ + + Y++E + +++D + G+KN D F+ + F A YPE+L L I + +W A LD A ++ T E L EY+D +L GG W F+ ++V Sbjct: 89 RFLRARKWDVSRALTMLTSMIKWRVE-LEVDKIIEQGEEVLNKEMPGFDFQMKSRKAYFHGSDKQNRPVFYIHVRIHEPRQQTFEVLRTFTIYKMETGRMFLTPPTYQNCLVFDMTDFGLKNMDWPFITFLVKAFEAYYPEILGTLAIHKAPWIFSGIWKALRPLLDPVVADKVVFTRTDEQLLEYIDAGQLPKELGGDEDWVFEYTDV 296
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_020581592.1 (CRAL-TRIO domain-containing protein YKL091C [Phalaenopsis equestris]) HSP 1 Score: 96.7 bits (239), Expect = 1.100e-16 Identity = 67/215 (31.16%), Postives = 96/215 (44.65%), Query Frame = 0 Query: 28 ELDRMIARFPDAKPKD-----LKRFLMGFHQKADKAISAYEAHLKWRAENLP---VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVA---TMEGLREYVDTEELLASCGGK 232 EL R I D+ KD LKRFL +KA + HL+WR E +P +++ E+ + + + G DK GRPV H+ +RDL E R + Y +EK S M N + FTII D + G + D L+ + YPE L + + V L W F+D+ S+I V M L E ++ +L GGK Sbjct: 9 ELMRKILEQKDSDSKDLDDSTLKRFLRARDLDVEKAANFLVKHLRWRREAIPKGYISESEIQNEIAQKKMFAQGFDKIGRPVGVVFGCRHNASNRDLNEFKRFVVYIIEKLCSRMQQNQEKFTIIADLQGLGYSHCDIRAYIAALDILQNNYPERLGKCFLLHVPYLFMKAWKIVYPFIDKNTRSKIIFVEDKNMMSTLLEDIEENQLPEQYGGK 223
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_004359533.1 (cellular retinaldehyde-binding/triple function domain-containing protein [Cavenderia fasciculata] >EGG21683.1 cellular retinaldehyde-binding/triple function domain-containing protein [Cavenderia fasciculata]) HSP 1 Score: 95.1 bits (235), Expect = 3.100e-16 Identity = 48/162 (29.63%), Postives = 84/162 (51.85%), Query Frame = 0 Query: 75 VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAF 237 + ++S EL+ G+ +FHG+DK+GRPV HD +RD+ E R Y +E + ++ T+I+D + KN D ++ ++ F+ YPE LA+ +I + W+ +LD S++ V T + L +++ TE LL S GG + + + Sbjct: 79 IKEDSIENELKSGKSFFHGTDKEGRPVCIVRTRKHDGTNRDIDEAQRYCVYVMESGKQMLKPGIETCTLIFDMSSFSTKNMDYPLVKFMVDMFQKYYPESLAKCLILNAPWIFMGFWHIIKHWLDPYTVSKVNFVKTKQ-LADFIPTENLLQSYGGSSQFKY 239
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_003559145.1 (phosphatidylinositol transfer protein 3 [Brachypodium distachyon] >KQK12099.1 hypothetical protein BRADI_1g01630v3 [Brachypodium distachyon]) HSP 1 Score: 95.1 bits (235), Expect = 3.100e-16 Identity = 62/215 (28.84%), Postives = 100/215 (46.51%), Query Frame = 0 Query: 27 GELDRMI-ARFPDAKPKD---LKRFLMGFHQKADKAISAYEAHLKWRAENLP---VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATME---GLREYVDTEELLASCGGK 232 GEL ++ A+ P +K +D L+RFL KA + + +L W+ P VT + EL + + Y G DK+GRP+ Y A H P RDL E R + Y +++ + +P + F + D + G N D L+ ++ YPE L ++ + V + W F+D++ + VA + LR+ VD +L GGK Sbjct: 30 GELRAVVEAQDPASKEEDDFMLRRFLRARDHNIGKASAMFLKYLAWKRTAKPRGDVTDDEVRNELAQEKLYMQGHDKEGRPMVYVIGARHLPSRRDLDEFKRFVAYVIDRTCTRLPAGQEKFAAVADLKGWGYANCDIRAYVAALDIMQSYYPERLGRVFLIHVPRVFMAAWRMVYPFIDDKTKKKFVFVADADLDAALRDAVDEAQLPEMYGGK 244
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_003295224.1 (hypothetical protein DICPUDRAFT_44467 [Dictyostelium purpureum] >EGC28251.1 hypothetical protein DICPUDRAFT_44467 [Dictyostelium purpureum]) HSP 1 Score: 94.4 bits (233), Expect = 5.300e-16 Identity = 68/243 (27.98%), Postives = 114/243 (46.91%), Query Frame = 0 Query: 3 LEILTPRVWDLLSPGGKNTQQVLQGEL----DRMIARFPDAKPKDLKRFLMGFHQKADKAISAYEAHLKWRA--ENLPVT---KESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAF 237 L+I+ +V +L P VLQ E+ D M+ RF A+ + K H+ LK+RA +N+ V + EL+ G+ YFHG DK GRPV + HD +RDL E MR + +E + ++ T+I+D + KN D ++ + F+ YPE L + +I + +W+ +LD AS++ V T + L +Y+ ++L + GG + + + Sbjct: 16 LDIINNKVKELKDP-------VLQNEINNLDDSMVLRFLRARKWNEKDSFEMLHEA-----------LKFRATFQNIGVNGIKPDMVENELKSGKSYFHGIDKGGRPVCVVKTSKHDSYNRDLDESMRYCVFVMENGKQMLKPGIETCTLIFDMSDFSSKNMDYPLVKFMVELFQKFYPESLQKCLILNAPWIFMGIWHIIKHWLDPNTASKVSFVKTKQ-LADYIPKDQLEKNYGGTSDFVY 239
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_016611508.1 (hypothetical protein SPPG_00952 [Spizellomyces punctatus DAOM BR117] >KND03469.1 hypothetical protein SPPG_00952 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 94.4 bits (233), Expect = 5.300e-16 Identity = 67/224 (29.91%), Postives = 106/224 (47.32%), Query Frame = 0 Query: 20 NTQQVLQGEL--DRMIARFPDAKPKDLKRFLMGFHQKADKAISAYEAHLKWRAE-----NLPVTKESC-LTELQKGRFYFHGSDKKGRPVAYYSLACHDPK--HRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNT 234 +T+ VL+ L + +A D + + R+L DKA++ A L WR E L V + L+ELQ G+ YFHG D GRP Y + HD R+ + + ++T + + + E P + TII+D N GMKN D +FL+ L + YPE L ++ + W +LD S++ + + E L YVD +++ GG +T Sbjct: 44 STENVLKSPLMEEFWLACAHDRPDQLMLRYLRARKWDVDKAVAMVMATLNWRKEFGVRNVLEVGERGLDLSELQSGKSYFHGVDCNGRPCCYVHVQLHDKNTVDREKTKALTVLTLETGRLVLEPPQEMA--TIIFDMTNFGMKNMDYDFLKFLLTCMQDYYPESLGGALVVNAPWIFNGCWTIIRPWLDPVVVSKVHFIKSSE-LFNYVDEKQIPERLGGSST 264
BLAST of NO19G01360 vs. NCBI_GenBank
Match: PKA47593.1 (Patellin-4 [Apostasia shenzhenica]) HSP 1 Score: 93.6 bits (231), Expect = 9.100e-16 Identity = 62/203 (30.54%), Postives = 90/203 (44.33%), Query Frame = 0 Query: 37 PDAKPKD---LKRFLMGFHQKADKAISAYEAHLKWRAENLP---VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATME---GLREYVDTEELLASCGG 231 P AK D L+RFL +KA + + HLKW+ E +P +++ E + + + G DK GRP+ H+P +RDL E R + Y +EK S M N + F II D + G N D L+ + YPE L +L+ V L W F+D +I V L E +D ++L GG Sbjct: 32 PCAKEVDDLTLRRFLRARDLDINKATNFFLKHLKWKREAIPKGFISESEIQNETTQRKMFSQGIDKNGRPIGVVLGCRHNPSNRDLDEFKRFVVYIIEKLCSRMQGNQEKFAIIADLQGWGYSNCDIRAYLASLDILQNNYPERLGKLLFVHVPYLFMKAWKIIYPFIDNNTKCKIVFVEDKNMKAKLLEEIDGDQLPEKYGG 234
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_021620187.1 (random slug protein 5-like [Manihot esculenta] >OAY43822.1 hypothetical protein MANES_08G100800 [Manihot esculenta]) HSP 1 Score: 92.8 bits (229), Expect = 1.500e-15 Identity = 65/226 (28.76%), Postives = 101/226 (44.69%), Query Frame = 0 Query: 18 GKNTQQVLQGELDRMIARF----PDAKPKD---LKRFLMGFHQKADKAISAYEAHLKWRAENLP---VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATME---GLREYVDTEELLASCGG 231 G+ + ++ Q ++ M A P AK D L+RFL +KA + + +L WR LP V+ L EL + + + G DKK PV + A H P + +L E R + + +E+ MP + F +I D G N+D L+ + YPE LA+L I V + T W + F++ + +I V + L E VD +L GG Sbjct: 11 GEESNEIQQYKVRLMRAHVEREDPSAKAVDDLMLRRFLRARELDIEKASTLFLRYLSWRRSFLPNGFVSTSDILNELAQNKLFMQGVDKKNHPVLVFFAAKHKPSNGNLEEFKRFLVFGLERVCERMPTGQEKFVVIADLEGWGYTNSDIRGYLAALSILQDFYPERLAKLFIVHVPSMFMTAWKLISPFINNKTKKKITFVENKKLKSILLEDVDESQLPDIYGG 236 The following BLAST results are available for this feature:
BLAST of NO19G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01360 ID=NO19G01360|Name=NO19G01360|organism=Nannochloropsis oceanica|type=gene|length=1838bpback to top protein sequence of NO19G01360.1 >NO19G01360.1-protein ID=NO19G01360.1-protein|Name=NO19G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=242bpback to top Synonyms
Publications
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