NO19G01360, NO19G01360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01360 vs. NCBI_GenBank
Match: EWM23633.1 (CRAL-TRIO domain protein [Nannochloropsis gaditana]) HSP 1 Score: 402.9 bits (1034), Expect = 7.000e-109 Identity = 188/238 (78.99%), Postives = 209/238 (87.82%), Query Frame = 0 Query: 1 MVLEILTPRVWDLLSPGGKNTQQVLQGELDRMIARFPDAKPKDLKRFLMGFHQKADKAISAYEAHLKWRAENLPVTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAFDP 239 MVLE LTPR WD+L+P K+TQ+ L+ EL++M A FP AK KDLKRFLMGFH KADKAI AYEAHL WRA+NLP+ KESCL ELQKGRFYFHG D +GRPVAYYSLACHDPKH D++EIMRMMTYQVEK L+EMPD+VKGFTI+WDTRNTG+KNTDTEFLREFLNFFRAQYPEVLAQL+I PVG QRTMWN FARFLDERRASRIRMVATME LR+Y+ +ELL + GGKNTW FDP Sbjct: 1 MVLEFLTPRKWDILTPKAKDTQEALRIELEKMTAHFPAAKEKDLKRFLMGFHTKADKAIPAYEAHLHWRAQNLPIAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHFDP 238
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_005758036.1 (hypothetical protein EMIHUDRAFT_438954 [Emiliania huxleyi CCMP1516] >EOD05607.1 hypothetical protein EMIHUDRAFT_438954 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 128.6 bits (322), Expect = 2.500e-26 Identity = 68/198 (34.34%), Postives = 103/198 (52.02%), Query Frame = 0 Query: 44 LKRFLMGFHQKADKAISAYEAHLKWRAENLPVTKE-SCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGM-KNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAFDPS 240 L+RFL+ K + AH+KWRAENLP+ E + L ELQKG+FY +G+D GRP+ DP RDL +R + Y++E+ ++++P F + +D + KN D L+ YPE L + P G L +W FLD R S+++ + T E L + + E + + GG +T AFDP+ Sbjct: 54 LRRFLVARKFKVPATVEMISAHVKWRAENLPIKPEGAVLAELQKGKFYSYGTDAAGRPLVLIHSGKFDPATRDLEASVRSVFYEIERVIAQLPPGQAQFAVFYDRTGFSIKKNWDYTLLKAVFTQLSNNYPERLGAGYVYPSGKLLPMLWGLVKHFLDARTRSKVKFINTQEELLKSLPAEYVPTAYGGSSTHAFDPA 251
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_005772066.1 (hypothetical protein EMIHUDRAFT_444869 [Emiliania huxleyi CCMP1516] >EOD19637.1 hypothetical protein EMIHUDRAFT_444869 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 128.6 bits (322), Expect = 2.500e-26 Identity = 68/198 (34.34%), Postives = 103/198 (52.02%), Query Frame = 0 Query: 44 LKRFLMGFHQKADKAISAYEAHLKWRAENLPVTKE-SCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGM-KNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAFDPS 240 L+RFL+ K + AH+KWRAENLP+ E + L ELQKG+FY +G+D GRP+ DP RDL +R + Y++E+ ++++P F + +D + KN D L+ YPE L + P G L +W FLD R S+++ + T E L + + E + + GG +T AFDP+ Sbjct: 54 LRRFLVARKFKVPATVEMISAHVKWRAENLPIKPEGAVLAELQKGKFYSYGTDAAGRPLVLIHSGKFDPATRDLEASVRSVFYEIERVIAQLPPGQAQFAVFYDRTGFSIKKNWDYTLLKAVFTQLSDNYPERLGAGYVYPSGKLLPMLWGLVKHFLDARTRSKVKFINTQEELLKSLPAEYVPTAYGGSSTHAFDPA 251
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_020677939.1 (random slug protein 5-like isoform X4 [Dendrobium catenatum]) HSP 1 Score: 105.9 bits (263), Expect = 1.800e-19 Identity = 70/215 (32.56%), Postives = 98/215 (45.58%), Query Frame = 0 Query: 28 ELDRMIARFPDAKPKD-----LKRFLMGFHQKADKAISAYEAHLKWRAENLP---VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVA---TMEGLREYVDTEELLASCGGK 232 EL R I D+ KD LKRFL D+A + HL WR EN+P +++ E+ + + + G DK GRP+A H+P +RDL E R Y +EK S M + FTII D + G N D L+ + YPE L +L++ V L W F+D+ S+I V M L E +D +L GG+ Sbjct: 9 ELMRRIVEQKDSDSKDLDDSTLKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 223
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_020677937.1 (random slug protein 5-like isoform X2 [Dendrobium catenatum]) HSP 1 Score: 105.9 bits (263), Expect = 1.800e-19 Identity = 70/215 (32.56%), Postives = 98/215 (45.58%), Query Frame = 0 Query: 28 ELDRMIARFPDAKPKD-----LKRFLMGFHQKADKAISAYEAHLKWRAENLP---VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVA---TMEGLREYVDTEELLASCGGK 232 EL R I D+ KD LKRFL D+A + HL WR EN+P +++ E+ + + + G DK GRP+A H+P +RDL E R Y +EK S M + FTII D + G N D L+ + YPE L +L++ V L W F+D+ S+I V M L E +D +L GG+ Sbjct: 19 ELMRRIVEQKDSDSKDLDDSTLKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 233
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_020677936.1 (random slug protein 5-like isoform X1 [Dendrobium catenatum]) HSP 1 Score: 105.9 bits (263), Expect = 1.800e-19 Identity = 70/215 (32.56%), Postives = 98/215 (45.58%), Query Frame = 0 Query: 28 ELDRMIARFPDAKPKD-----LKRFLMGFHQKADKAISAYEAHLKWRAENLP---VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVA---TMEGLREYVDTEELLASCGGK 232 EL R I D+ KD LKRFL D+A + HL WR EN+P +++ E+ + + + G DK GRP+A H+P +RDL E R Y +EK S M + FTII D + G N D L+ + YPE L +L++ V L W F+D+ S+I V M L E +D +L GG+ Sbjct: 19 ELMRRIVEQKDSDSKDLDDSTLKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 233
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_020677938.1 (random slug protein 5-like isoform X3 [Dendrobium catenatum] >PKU79568.1 Patellin-5 [Dendrobium catenatum]) HSP 1 Score: 105.1 bits (261), Expect = 3.000e-19 Identity = 66/214 (30.84%), Postives = 98/214 (45.79%), Query Frame = 0 Query: 24 VLQGELDRMIARFPDAKPKDLKRFLMGFHQKADKAISAYEAHLKWRAENLP---VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVA---TMEGLREYVDTEELLASCGGK 232 +L+ ++R + D LKRFL D+A + HL WR EN+P +++ E+ + + + G DK GRP+A H+P +RDL E R Y +EK S M + FTII D + G N D L+ + YPE L +L++ V L W F+D+ S+I V M L E +D +L GG+ Sbjct: 15 LLRNLVERKDSNAKDLDDSTLKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 228
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_020677940.1 (random slug protein 5-like isoform X5 [Dendrobium catenatum]) HSP 1 Score: 104.0 bits (258), Expect = 6.700e-19 Identity = 69/214 (32.24%), Postives = 97/214 (45.33%), Query Frame = 0 Query: 29 LDRMIARFPDAKPKD-----LKRFLMGFHQKADKAISAYEAHLKWRAENLP---VTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVA---TMEGLREYVDTEELLASCGGK 232 L R I D+ KD LKRFL D+A + HL WR EN+P +++ E+ + + + G DK GRP+A H+P +RDL E R Y +EK S M + FTII D + G N D L+ + YPE L +L++ V L W F+D+ S+I V M L E +D +L GG+ Sbjct: 10 LMRKIVEQKDSDAKDLDDSTLKRFLRARDLDVDRASNFLLKHLSWRRENIPKGFISESEIQNEIAQKKIFSQGFDKNGRPIAVLFGCRHNPSNRDLNEFKRFAAYILEKLCSRMQGKEEKFTIIADLKGWGYSNCDIRAYIAALDILQNNYPERLGKLLLLHVPYLFMKAWKIICPFIDKNTKSKIIFVEDKNKMTTLLEDIDESQLPEQYGGR 223
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_012759531.1 (hypothetical protein SAMD00019534_006440 [Acytostelium subglobosum LB1] >GAM17469.1 hypothetical protein SAMD00019534_006440 [Acytostelium subglobosum LB1]) HSP 1 Score: 103.6 bits (257), Expect = 8.800e-19 Identity = 67/222 (30.18%), Postives = 108/222 (48.65%), Query Frame = 0 Query: 19 KNTQQVLQGEL----DRMIARFPDAKPKDLKRFLMGFHQKADKAISAYEAHLKWRAENLPVTKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAF 237 +NT V+Q E+ D MI RF A+ K L ++ A+ + E +T+ES EL+ G+ +F+G D GRPV HD RD+ E R Y +EK + +P ++ T+I+D + KN D E ++ ++ F+ YPE L + +I + +WN ++D ++ V + + L EY+ E LLAS GG +TW + Sbjct: 25 ENTDPVIQEEISKLDDSMILRFLRAR----KWVLNDAYKMLLDALVFRATFQEIGVEK--ITEESVENELKTGKSFFYGWDNGGRPVCIIRTRKHDSSQRDIQEAHRYCVYFMEKGKALLPPGIETCTLIFDMTSFSTKNMDYELVKFIVDMFQKYYPESLNKCLIVNAPWIFTGIWNIIKHWMDPITVGKVNFVKSKQ-LIEYIPAEHLLASYGGASTWKY 239
BLAST of NO19G01360 vs. NCBI_GenBank
Match: XP_643391.1 (cellular retinaldehyde-binding/triple function domain-containing protein [Dictyostelium discoideum AX4] >EAL69436.1 cellular retinaldehyde-binding/triple function domain-containing protein [Dictyostelium discoideum AX4]) HSP 1 Score: 103.2 bits (256), Expect = 1.100e-18 Identity = 68/212 (32.08%), Postives = 105/212 (49.53%), Query Frame = 0 Query: 30 DRMIARFPDAKPKDLKRFLMGFHQKADKAISAYEAHLKWRAENLPV-----TKESCLTELQKGRFYFHGSDKKGRPVAYYSLACHDPKHRDLAEIMRMMTYQVEKALSEMPDNVKGFTIIWDTRNTGMKNTDTEFLREFLNFFRAQYPEVLAQLVIAPVGLLQRTMWNAFARFLDERRASRIRMVATMEGLREYVDTEELLASCGGKNTWAF 237 D M RF A+ +LK D YEA LK+RA V T+ + EL+ G+ YFHG DK GRPV + HD +RDL E MR Y +E S + D ++ T+I+D + KN D ++ + F+ YPE L + +I + +W+ +LD AS++ V T + L +Y+ ++L +S GG +T+ + Sbjct: 40 DSMTLRFLRARKWNLK----------DSFDMLYEA-LKFRATFQDVGVEGITESMVVNELKSGKSYFHGVDKGGRPVCIVKTSRHDSYNRDLNESMRYCVYVMENGKSMLKDGIETCTLIFDMSDFSSKNMDYPLVKFMVELFQKFYPESLQKCLILNAPWIFMGIWHIIKHWLDPNTASKVSFVKTKQ-LVDYIPKDQLESSYGGTSTFKY 239 The following BLAST results are available for this feature:
BLAST of NO19G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01360 ID=NO19G01360|Name=NO19G01360|organism=Nannochloropsis oceanica|type=gene|length=1838bpback to top protein sequence of NO19G01360.1 >NO19G01360.1-protein ID=NO19G01360.1-protein|Name=NO19G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=242bpback to top Synonyms
Publications
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