NO19G01270, NO19G01270 (gene) Nannochloropsis oceanica

Overview
NameNO19G01270
Unique NameNO19G01270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2532
Alignment locationchr19:402460..404991 +

Link to JBrowse

Properties
Property NameValue
DescriptionPeptidase s41
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:402460..404991 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
IPR001440TPR_1
IPR019734TPR_repeat
Homology
BLAST of NO19G01270 vs. NCBI_GenBank
Match: EWM23653.1 (peptidase s41 [Nannochloropsis gaditana])

HSP 1 Score: 374.4 bits (960), Expect = 4.700e-100
Identity = 205/292 (70.21%), Postives = 226/292 (77.40%), Query Frame = 0
Query:   97 KLSPLLLGFLPMLAPSSPYGQASSVANAATFTSTFFEPSTTMSAVAFDDAMEKAKAGEEEVMGMVEVGEE-----KDGLRLMGKVEPIDKLGKEAEGIFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELLPSKAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGKFGRVEEIKVALATIVYAYGDKNEAER 384
            K SPLL GFLP+LAP+           AA+FT T     +   AV+F     K          MV   +E     ++  RLMG+VEPID+LG+EAEGIFKRARIAE+DNEFEKALRLYDRVTR+APGYAYAWSNKGNAYIALGDLEKGLDSY+RA+ELLPSK GDAWLVYLNKATTELALDR+DAAI DLDLARVL GQPDMLLFANKGLALERKG    ALENYEFAV++KPKDVQPWWLRYS+VLFQEQQDIK+MEVMRKV GKFGRVEE KVALA+     G     ER
Sbjct:   87 KFSPLLFGFLPVLAPA-----------AASFTPTPAHAVSAPVAVSFSIISTKGPTALVAATDMVLKEDEMKADGEEVQRLMGRVEPIDRLGQEAEGIFKRARIAEADNEFEKALRLYDRVTRVAPGYAYAWSNKGNAYIALGDLEKGLDSYSRAVELLPSKTGDAWLVYLNKATTELALDRLDAAIQDLDLARVLRGQPDMLLFANKGLALERKGDLAQALENYEFAVLTKPKDVQPWWLRYSMVLFQEQQDIKAMEVMRKVVGKFGRVEETKVALASKCLGVGWGRGRER 367          
BLAST of NO19G01270 vs. NCBI_GenBank
Match: CBJ30660.1 (TPR domain-containing protein [Ectocarpus siliculosus])

HSP 1 Score: 177.9 bits (450), Expect = 6.500e-41
Identity = 91/246 (36.99%), Postives = 139/246 (56.50%), Query Frame = 0
Query:  175 KVEPIDKLGKEAEGIFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELLPS-KAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGKFGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDEDFLRNKLRWPQRMIDTLREF 420
            +V P  KL  E    FK+A+ A S  +F+KA +LY++V + APGY Y WSN+ N  IA GDL+  +  Y+RA++L       D W++YL                     A  L+   D+   AN+  A ER+G +  AL +YE A+  +P +VQPWW+RYSLVLFQE +D  S+  +++V  KF  V E++ A+  I +  GD   AE  W  +N   Q  Y  + +L+++L+WP R++++L+ F
Sbjct:  161 EVVPTIKLEGELAAQFKKAQAAGSVQQFDKAKKLYNQVVKYAPGYVYGWSNRANVLIAEGDLKAAVSDYDRALQLAEGIYMPDKWIIYLXXXXXXXXXXXXXXXXXXXXQAAKLNTSKDLYTLANRAQAFERRGDWAKALADYEGAINVQPGNVQPWWIRYSLVLFQEGRDFDSLAFLKRVQAKFEGVGEVQAAMTAIEFGRGDMKAAEGAWRGINIVDQQMYLKDSYLKDQLKWPPRVVESLKSF 406          
BLAST of NO19G01270 vs. NCBI_GenBank
Match: CEM11327.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 153.7 bits (387), Expect = 1.300e-33
Identity = 90/289 (31.14%), Postives = 151/289 (52.25%), Query Frame = 0
Query:  133 EPSTTMSAVAFDDAMEKAKAGEEEVMGMVEVGEEKDGLRLMGKVEPIDKLGKEAEGIFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELL---PSKAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGKFGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDEDFLRNKLRWPQRMIDTLRE 419
            E ST+++            +G++   G+  V   ++ +     V+P  ++  EA G++++AR A  +  ++ A+ L +RVT+ AP YAY +S+ G A    G+  + L    RAI+L     +   D W VYL +    L L     A+ DLD A+ L G+PD L+  ++  AL++ G++  A  +YE AV     D QP+WLRY L L ++ + ++S  +MR+V  KF    E+  A + I +  GDK  + R +  L+  AQ  Y    FL  K+RWP + +  +++
Sbjct:  108 EASTSLTPTGLHGHNSHLSSGDQGTAGLSTVWLSENPV----AVDP-TRISGEAGGVYRKARAALEEGRWDDAVILLERVTKAAPNYAYGYSSLGTAKANRGEPREALVELTRAIDLFREGRATPSDLWTVYLQRGNIRLTLKECSTAVEDLDEAKRLRGRPDALVLTSRAQALDQCGRWSEAAADYEGAVGLLASDPQPFWLRYCLALLEQNRVLESFGIMRRVQSKFPDAAEVNAATSAIYFTRGDKEGSARFFRLLSPDAQKDYSQRSFLEGKVRWPPKAVAAMQK 391          
BLAST of NO19G01270 vs. NCBI_GenBank
Match: GAX21480.1 (hypothetical protein FisN_10Hh060 [Fistulifera solaris])

HSP 1 Score: 141.7 bits (356), Expect = 5.100e-30
Identity = 76/237 (32.07%), Postives = 124/237 (52.32%), Query Frame = 0
Query:  181 KLGKEAEGIFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELLPS-KAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGKFGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDEDFLRNKLRWPQRMIDTL 417
            +L  +A+ IF   R  E       A RLY +VT++AP + Y WS+ GN   A GDL     SY ++I+L       D +++YLN+ T  L  +R   A+ DL LA  L G+PD ++  N   A E  G +  A  NY+ A+      V P+WLR ++V FQ  +  +  ++++++  +F    E+K A A  +   G   EA++ + E++ + + KY D+ +L   + WP  M+  L
Sbjct:   67 QLTGDAKKIFGEGRALELQGNLMAAQRLYGKVTQMAPNFVYGWSSLGNTQTAFGDLAAAEVSYTKSIDLCTQVDCSDQYVLYLNRGTIRLNTNRPAEALADLRLAATLRGRPDDIVLQNLARACELNGLYEEADRNYDVAIRMTGNQVSPYWLRAAMVKFQLNEKQQGYDLLKRIENRFPDAPEVKAASAVFLAGTGKMVEAQQKFLEISDRQRLKYVDQQYLTGTIAWPPAMLSQL 303          
BLAST of NO19G01270 vs. NCBI_GenBank
Match: GAX17207.1 (hypothetical protein FisN_10Lh060 [Fistulifera solaris])

HSP 1 Score: 140.2 bits (352), Expect = 1.500e-29
Identity = 75/237 (31.65%), Postives = 124/237 (52.32%), Query Frame = 0
Query:  181 KLGKEAEGIFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELLPS-KAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGKFGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDEDFLRNKLRWPQRMIDTL 417
            +L  +A+ IF   R  E       A RLY +VT++AP + Y WS+ GN   A G+L     SY ++I+L       D +++YLN+ T  L  +R   A+ DL LA  L G+PD ++  N   A E  G +  A  NY+ A+      V P+WLR ++V FQ  +  +  ++++++  +F    E+K A A  +   G   EA++ + E++ + + KY D+ +L   + WP  M+  L
Sbjct:   29 QLTGDAKKIFGEGRALELQGNLMAAQRLYGKVTQMAPNFVYGWSSLGNTQTAFGNLAAAEVSYTKSIDLCTQVNCNDQYVLYLNRGTIRLNTNRPAEALADLRLAATLRGRPDDIVLQNLARACELNGLYEEADRNYDVAIRMTGNQVSPYWLRAAMVKFQLNEKQQGYDLLKRIENRFPDAPEVKAASAVFLAGTGKMVEAQQKFLEISDRQRLKYVDQQYLTETIAWPPAMLSQL 265          
BLAST of NO19G01270 vs. NCBI_GenBank
Match: XP_002185640.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65110.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 135.2 bits (339), Expect = 4.800e-28
Identity = 78/244 (31.97%), Postives = 122/244 (50.00%), Query Frame = 0
Query:  185 EAEGIFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELLP------------SKAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGKFGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDEDFLRNKLRWPQRMIDTL 417
            +A+ +F  AR  ES      A RLY +VT+I+P + Y WSN  N   ALGDL     +Y+ AI+L               +  D +++ LN+ +  L   R   A+ DL  + +L G+PD  +  N   A E  G +  A  +Y  A+     +V P+WLR SLV FQ        ++M++V  +F    E++ A A  + A GD+   +R + E+  +A+ KY D+++L   + WP    DTL
Sbjct:   73 DAKKLFNEARALESQGNMAAAQRLYTKVTKISPRFIYGWSNLANTQTALGDLRSADQAYSIAIDLCNENLQTTEEGFGIKRCNDLYVLLLNRGSLRLNDGRPKEALADLQQSDLLRGRPDSTVLQNLARAKELNGLYKQADNDYTVAISMTANEVNPFWLRSSLVKFQLGDIQGGYDLMKRVENRFPEAPEVRAAYACFLAARGDQVAGQRKYLEIPDRARLKYVDQNYLTRTISWPPAARDTL 316          
BLAST of NO19G01270 vs. NCBI_GenBank
Match: EJK45918.1 (hypothetical protein THAOC_35441 [Thalassiosira oceanica])

HSP 1 Score: 130.6 bits (327), Expect = 1.200e-26
Identity = 71/242 (29.34%), Postives = 122/242 (50.41%), Query Frame = 0
Query:  189 IFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAI--------ELLPS----KAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGKFGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDEDFLRNKLRWPQRMIDTLRE 419
            +F+  +  E+      A R+Y + T+IAP + YAW+N  N  +A GDL    ++Y  AI        E+ PS    +  D +L+ LN+ +  L   +    + DL  +  L G+PD ++  N   A E    +G A  NY  A+     +V P+WLR S+V FQ+     + ++ R+V  +F    E++   A ++ A GD++ A R + E+  + + KY D +++   + WP  M +TL +
Sbjct:  107 LFREGQALEAQGNILAAQRIYTKATKIAPRFIYAWANLANTLVAQGDLSNADEAYTTAISLCEQNLSEVEPSFGTKRCDDLYLLLLNRGSVRLNNGKPSEGLADLSKSNDLRGRPDSVILENLARAQEINSYYGLADRNYSTAISMTANEVAPFWLRSSMVKFQQGDLTGAFDLARRVENRFPEAPEVRACYACLLLAKGDEDAARRKYLEIPDRPRLKYSDREYVDRVITWPPAMKETLAQ 348          
BLAST of NO19G01270 vs. NCBI_GenBank
Match: XP_005707660.1 (hypothetical protein Gasu_16360 [Galdieria sulphuraria] >EME31140.1 hypothetical protein Gasu_16360 [Galdieria sulphuraria])

HSP 1 Score: 129.0 bits (323), Expect = 3.400e-26
Identity = 74/237 (31.22%), Postives = 130/237 (54.85%), Query Frame = 0
Query:  183 GKEAEGIFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELLPSKAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGKFGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDEDFLRNKLRWPQRMIDTLREF 420
            GK A+   K  ++AE + EF  A +LY ++ +  P +A A+SN  N  I  G   + + +Y RA+EL P  + D W+VYLN+A T +AL  I+ A+ D++ A     + D L+ + + L    +GK+  A   ++ AV S+P +VQP+W  Y ++LF++ +  ++  ++ +V+ K+ ++ +I V LA I YA G+   AE  W  +     Y +    F+  +  WP ++   +  F
Sbjct:  123 GKGAKIFSKAKKLAELE-EFSAAEKLYQQLIQEEPTFAPAYSNLANIQIIFGKYSQAITNYTRALELAP-LSNDTWIVYLNRANTWIALRDIEKAMADIEQAAQWKPK-DSLILSTRALLFAYEGKWDEAFLEFQNAVESRPNEVQPFWFNYGMLLFEKSKSFEARSIIYRVAQKYPKLSDIHVVLAGIEYAEGNIQTAESQWKLVEHPKIYTH---IFIEREKIWPPKVKQAVESF 353          
BLAST of NO19G01270 vs. NCBI_GenBank
Match: XP_005710066.1 (TPR repeat-containing protein [Chondrus crispus] >CDF39772.1 TPR repeat-containing protein [Chondrus crispus])

HSP 1 Score: 125.6 bits (314), Expect = 3.800e-25
Identity = 92/316 (29.11%), Postives = 162/316 (51.27%), Query Frame = 0
Query:  118 ASSVANAATFT------------STFFEPSTTMSAVAFDDAMEKAKAGEEEVMGMVEVGEEKDGLRLMGKVEPIDKLGKEAEGIFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELLPSKAGDAWLVYLNKATTELAL-DRIDAAITDLDLARVLHGQPDMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGKFGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDEDFLRNKLRWPQRMIDTLREFK 421
            A +++NA+TF+            S F E  T  +      ++E+ KA  E         E +   R  GKV             F  AR      +  +AL  YD +T+  P +A A+SN+GN + A    ++ +  Y+R++EL P    D+W+V++N+  T+LA  D    A+ D+++A  L    D++L +N+    E  GK+  A+ +Y+ A+ S   DVQP+W RY LVLFQ  +  +++ ++++V+ +F  V ++  A+A I +  GD  EAE  WS ++    ++   + FL ++ +WP R ++ +  F+
Sbjct:   86 AIALSNASTFSPHHHGDAHFVVASAFAETETATNFSVSSLSVEERKALRE---------ESRRHTRAAGKVAQ----------NFALARRQALAGDIPEALSTYDAITKSDPDFAPAYSNRGNIFAAQKKFDQAITEYDRSLELAPLD-NDSWVVFVNRGVTKLARGDDPYIALADMNIANELRAGNDIIL-SNRAGVWEVMGKWDNAIRDYQAALQS--NDVQPFWERYGLVLFQRNKSYEALSILKRVATRFD-VSDVHAAMAVIYFDRGDIAEAETQWSLVDRPRLFE--SKKFLVSERKWPPRAVEAMENFR 375          
BLAST of NO19G01270 vs. NCBI_GenBank
Match: XP_005535048.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM78762.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 119.8 bits (299), Expect = 2.100e-23
Identity = 76/249 (30.52%), Postives = 122/249 (49.00%), Query Frame = 0
Query:  189 IFKRARIAESDNEFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELL--------------------PSKAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQP-DMLLFANKGLALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEVMRKVSGK--FGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDEDFLRNKLRWPQRMID 415
            +F RA+  E + EF++AL++Y  V    PG  +A++N+ N Y  LG  ++ L  Y +AI LL                    P    + W++YLN+AT    L R   A+ D++  R L  +P + L                               DVQP+W+ Y+L LFQ  +D  ++ +MR+V+ K  F + +E+K A A ++Y  G  ++AE +W  L  Q   +++DE+FLRN+  WP R I+
Sbjct:  279 LFSRAQRLEDEGEFQEALKIYASVVDREPGLVWAYANRANLYSRLGQYDQALADYTQAIRLLCKTVSGNESTGDERLTDADAPCLERELWVLYLNRATVYRTLRRHQEALRDMN--RALSIRPYEPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVQPFWVDYALTLFQRGRDTDALGIMRRVASKPSFAQSDEVKAAYAVLLYDRGMLSDAEGLWGAL--QRPRRFQDENFLRNERHWPPRAIE 523          
The following BLAST results are available for this feature:
BLAST of NO19G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23653.14.700e-10070.21peptidase s41 [Nannochloropsis gaditana][more]
CBJ30660.16.500e-4136.99TPR domain-containing protein [Ectocarpus siliculo... [more]
CEM11327.11.300e-3331.14unnamed protein product [Vitrella brassicaformis C... [more]
GAX21480.15.100e-3032.07hypothetical protein FisN_10Hh060 [Fistulifera sol... [more]
GAX17207.11.500e-2931.65hypothetical protein FisN_10Lh060 [Fistulifera sol... [more]
XP_002185640.14.800e-2831.97predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK45918.11.200e-2629.34hypothetical protein THAOC_35441 [Thalassiosira oc... [more]
XP_005707660.13.400e-2631.22hypothetical protein Gasu_16360 [Galdieria sulphur... [more]
XP_005710066.13.800e-2529.11TPR repeat-containing protein [Chondrus crispus] >... [more]
XP_005535048.12.100e-2330.52hypothetical protein, conserved [Cyanidioschyzon m... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL013nonsL013Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR037ngnoR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004486NSK004486Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01270.1NO19G01270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G01270.2NO19G01270.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599050gene_7521Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100191g3gene6808Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01270.1NO19G01270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G01270.2NO19G01270.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01270 ID=NO19G01270|Name=NO19G01270|organism=Nannochloropsis oceanica|type=gene|length=2532bp
TCTCCCTGTGGGTCTATGTGGACTAGGAGGGGAAGGGGGGTATGGAGGGT
GGGGGGTCAGTAGTGCCATGGGCAAGACGGGTTGGTTGATCTACGCCAAT
GGCCTTGGCAGCAGATAGAAGGGACATTCATGGCATAGTGCACTCGATGA
ATGGGAGGATTTGGAGGGCATGGACTTAAAGGTATGGCCGCCGCAGGAAG
CGATAATAGTGAGGGGGCTACCCCTTGGATGAGAAGGGAGTCGGAGTGGA
GGCTATGTACCATATGCAATTACGGGTGGCGTGTAACTGCCTAACCTTCT
CCCCCTCGTCTCGACCCCTCTCTAAACTCACTACAGCTATCTGTCCTGTT
GCGTAATGTGTTGGATGCAGGCCCGGTGTGAGAGTCGACTTTTGTTCCAT
GAGCACGATCGCCGGAGGACGAGCATTCGCAAATTGAGGCTCAGAGCCCA
CAAAAGCTGACCCACACAACACCCCATCCATTCACAGGTCACCATGCCGC
GTCTTCAGCACGCCCATGCCCTGTTGCTTCTTCTAGTCGCTACGACTTGT
GTCTCTCTCCATCCTGCCGCCGCTGCTCTCCGACCTGCCACCAAGATTTG
GGCCTCCTCCTCCCGCGCGGCCTACGTCTCCCCTCGCCCACCCTCCTGCC
TCCTCGCCAGCACCCGTGCCGCTGTACAGCGCAGAAGAGAACAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTTGGTGACGGCACCTTGAC
CCTCGCGACAGCACCCGTGATCTTACTCCGGAAACTGTCTCCACTTCTTC
TTGGTTTCCTTCCCATGCTTGCCCCATCATCGCCTTACGGGCAGGCCTCG
TCAGTAGCTAATGCGGCCACTTTTACCTCCACTTTTTTTGAGCCATCAAC
AACGATGTCGGCTGTTGCCTTTGACGACGCGATGGAAAAGGCGAAGGCAG
GAGAGGAGGAGGTGATGGGCATGGTAGAAGTAGGAGAGGAGAAAGACGGG
CTCCGCCTGATGGGGAAGGTGGAACCAATTGATAAGCTGGGAAAGGAGGC
AGAGGGTATCTTCAAGgtgcgtaggttggaagagaaagggagggacgaaa
atatttgagagtacaaggtggatatgctgcctttttaaacctctttttcc
atcctctcctccacccacaacatgcacactcacacactcagCGTGCCCGT
ATTGCGGAATCGGATAACGAATTCGAGAAAGCTTTGAGGCTGTACGATCG
AGTCACGCGCATCGCACCGGGTTATGCGTATGCGTGGAGCAACAAGGGCA
ATGCGTACATCGCCTTGGGAGATCTCGAAAAGgtaagagaggagggaagg
agggaaaggagggaaggaggacaggtgcacgagctcccaatatgttttac
tgcgacatcaggcgcaatcaatcaatatcttttcctttcctttttccctc
cctccctccctccctccctccctcccacagGGTCTAGACTCATATAACCG
GGCCATCGAGCTCCTACCGTCCAAGGCCGGGGACGCTTGGCTGGTGTACC
TTAACAAAGCCACCACGGAACTCGCCCTCGACCGAATAGACGCCGCCATC
ACCGACTTGGACCTTGCGAGAGTTCTGCACGGACAGCCGGATATGCTGCT
TTTCGCCAACAAGGGCCTGGCGTTGGAGAGGAAAGGGAAGTTTGGACCGG
CCCTTGAGAACTATGAATTTGCTGTCATGAGCAAGCCCAAGGACGTGCAG
CCGTGGTGGTTGAGgtgcgtacatacgccccacccttccctctctccctc
tttgcctccccccctccttcaggtactccctcgtcctttttcaggagcaa
caaaacatcaagtctatggagggtgatgcgaaaactgacgtctccttccc
tccctccttccctcctccctccctccttcagGTACTCCCTCGTCCTGTTC
CAGGAGCAACAAGACATCAAGTCTATGGAGGTCATGCGAAAAGTGTCGGG
GAAATTTGGGCGTGTGGAAGAAATCAAGGTGGCCCTCGCGAGTAAGTAGG
TGGAGACGAGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGACAGGTGTGA
CTGAGGAAGGTATGAGTCATCCCACGGGGGAGATAGAAAAATATAAAAAG
GCAGAGGGCATTTGGAAGGAGGGCAGGGGGGAAGGTAGGGAGGGAGGAAG
GGCGAGATATCTCCCCACATGTTCACACTCTTATTGCCTTCCTCTTACTA
TCCTCTCCTCCCTCCTTCTCTCGCTCCCTCCCTCCTTAGCGATCGTCTAC
GCCTATGGAGACAAGAACGAAGCTGAACGAATGTGGAGCGAACTGAACGG
CCAGGCCCAGTATAAGTACAGGGACGAGGATTTTCTTAGAAACAAATTAA
GGTGGCCCCAGAGGATGATTGACACACTCAGAGAGTTCAAGGGGCTTTAT
ACATCGAGGGTCTAGGAAGGGAGGGAGGGGGGAAGGAGGGAGGGTAGGAG
GGGATAGGGAAGAAGAAGCAGGCAATCATCGT
back to top

protein sequence of NO19G01270.1

>NO19G01270.1-protein ID=NO19G01270.1-protein|Name=NO19G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MPRLQHAHALLLLLVATTCVSLHPAAAALRPATKIWASSSRAAYVSPRPP
SCLLASTRAAVQRRREQQQQQQQQQQQQQLGDGTLTLATAPVILLRKLSP
LLLGFLPMLAPSSPYGQASSVANAATFTSTFFEPSTTMSAVAFDDAMEKA
KAGEEEVMGMVEVGEEKDGLRLMGKVEPIDKLGKEAEGIFKRARIAESDN
EFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELL
PSKAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKG
LALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEV
MRKVSGKFGRVEEIKVALATIVYAYGDKNEAERMWSELNGQAQYKYRDED
FLRNKLRWPQRMIDTLREFKGLYTSRV*
back to top

protein sequence of NO19G01270.2

>NO19G01270.2-protein ID=NO19G01270.2-protein|Name=NO19G01270.2|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MPRLQHAHALLLLLVATTCVSLHPAAAALRPATKIWASSSRAAYVSPRPP
SCLLASTRAAVQRRREQQQQQQQQQQQQQLGDGTLTLATAPVILLRKLSP
LLLGFLPMLAPSSPYGQASSVANAATFTSTFFEPSTTMSAVAFDDAMEKA
KAGEEEVMGMVEVGEEKDGLRLMGKVEPIDKLGKEAEGIFKRARIAESDN
EFEKALRLYDRVTRIAPGYAYAWSNKGNAYIALGDLEKGLDSYNRAIELL
PSKAGDAWLVYLNKATTELALDRIDAAITDLDLARVLHGQPDMLLFANKG
LALERKGKFGPALENYEFAVMSKPKDVQPWWLRYSLVLFQEQQDIKSMEV
MRKVSGKFGRVEEIKVALASK*
back to top
Synonyms
Publications