NO19G01150, NO19G01150 (gene) Nannochloropsis oceanica

Overview
NameNO19G01150
Unique NameNO19G01150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2510
Alignment locationchr19:377775..380284 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:377775..380284 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G01150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004450NSK004450Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01150.1NO19G01150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599019gene_7509Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100137g6gene6836Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01150.1NO19G01150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01150 ID=NO19G01150|Name=NO19G01150|organism=Nannochloropsis oceanica|type=gene|length=2510bp
TATTTCCTTTTATTTGGGCCTTTGTAATGCGTTGTTTGTGAGGTGGGTGG
GGAGGTTTTCCGTGTGTATCTGCGTCTGCCACTTGCTCTCTTGGACTGAT
GAACTCATCTAATGAAATATTCCCAGTTCCGGATGCAGGGGCAGGCACTG
CACGTGACCGAAAACTCAAAACTTACAGATCGTCGGTGGGCAGAGGAGGC
AAGGCCCCACGCTTGTTTTTCGATAAAACGCACATTGACCACAATCACGA
ACCACACCTCCCTCCCCCTCCCCCCATTCCTCCATGTTCCCGTACAGGTC
TCTGTCCTTTATTGGATCAGCAGCAGCGCAAGCAGCGGTGACAGCAACAG
GACAACTTTTTAGCGTCTTCCTTGCCTTGCCTTGCTCCCATCATTAAAGT
GGGCGACGGCGAGGAGCAACATCATTTAACGAGGACACACTCATATCACC
ATGCCTGCCTCAAGAAGACCAGTCAGCAGCAGCTACGAGAATCGGCCGCG
ACAAAGGCAGGGTTTGCTTGTAATGGCCCCTCTCCTCATCTTTGGTTTCC
TTGTCCTCTTCACCCCGGGCGCCGCGGCTGTCAAAGTGTGGGGCTTGCCT
TTTGCCAgtacgtaaactgagtgacagggaggactcattgtgtcatgaat
ttcccattattttttcgtgtgtattaaatttaccatatatttcttaagtt
tactcttagcctcctgttttcttcgcatgctccctttctacgctcttcac
tctcctgcaccacacctcagatcaacagagacttaccagcaagttttcaa
tgaatttcacgcggtgaaagcaaacaattctgtaatcagcttcaaccctt
cctccctctctccctctctctctccctccctccctccacagATCCTCTGC
ACTGGCTTCGTCCCGGCAGCAGCGGCACGCGAAACTTGCAAGCCGCCGTC
CGCGCTCTCGAGGGCGAACTTTCTCGTCTCCGTTCCCTTCATTCTGCCCA
TCTTGAGGAGTTGCGCAAGCTGCGCTTGAAACGCGCTGAGGACCATGCCC
TCTTTCGTCAACAGAAACGTGAACAAGATGAAAAACTTTTAAAAATTCAG
AAGGAGGCAGCAGAGGCATTAGCATTAGCCAAGGAGAAGGAAGCAGGGGT
AGAGGAAGAGTTGGAGAATGAGAGGAAGAGATGGAGGATTGAGGCACAGG
AAGCGATCGGCAAGGCAGTGAGGGTAGCCGTGGAGCAGGAAGGGAGGAAG
CGGAAAGAGGAGGTAGGGAAATTGGAAAGTTTGTTGGCGGCTAGGACGAG
GGATGACGAGGAGGGGAAGGAGATTGAGGAGATGGAGGAGATGTTCGAGA
AGGAACGAAAGGTGTTCAAAAAGAGGCTGGCGGCTGAGAGGGAGGTGGCA
GAGGAGGCACTGGAGAGAGAGGAAAAGCTGCAGCAGGTGGTTTCAGCTTT
GGAGGATGATAATCAGATTTTAAAGAACGAGGTGGGAAAATTGACCATGA
AGATCAACAGCAGCAGTAGCGTGCCTCCCACAACAGCAGCAGCGGCAGCA
CCAGCACCAGCAGCTGTAGTACCGGTAAAAGAGGAGGAGGAGAATAAGGG
GGAAGAAGTTGTTGCACCAGCAGCAGTACTAGCATCACCAGCTGCGACCA
CGGAGCCAGTTAAGACGACACAGGCCGTCATGCCCCCCACCTCTCCTCCT
GTGGCAGGCACGCTGAAAGTCACCACTCCTTCCAGCGGCAGCATCAGTGG
TGGTTATAGCGACAAGAGTTGCATCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCATCACCACCACGAAGACGCCGGCAGTGGCAGCGCCTGTC
AAGAAGTTAAAAAAAAAAGTGTCAAGCAAATCAGCAGGAGGGCGAGTCGG
AAGTGGAGCAGCAGGAGCAGCAAGGGCAGGTGCAGGAGTATCAAGAGGAT
CAGGCACGATTTCTCCACCACCTGTAGTAAAAAATATCGTTCCAAAAAGG
ACAGTTACCATGAAGAAGAAGGAGGCGGCGGCAAGCAACTCGTCTGCCTC
CTCCCCCTCCCCCCTTTCCTCCTCCTCTAAGGCATCTCGTCCAAGACACC
AGCCAGTGGCGCCTTCGATTAAGAAGGGCGGTCTGGGTACATCCAAATAG
CACACACTAGCGTTGAATCATGGAAAGGAAAGAGAATAATGGAGTGAAGG
AAGAGAGAGTAGGTGAAACGCAAGCGAAGGACATTAGAATTACAGTCTTG
AGAAGGAGAGAGGAGAAAATGAAGAGAAGAAAAAACTAACAGGAAGGAAA
CCACCCATATAAGGTCTTGGCATATCTTAAAACATGGACTACAACACGAC
ACGCAAAACAGACCATTGGCAATGGGGATACAGGCTTTTCGCCGGAGTAT
TACATCTAAGCGGTAGGCGAACGAGAATTCAAAGTCGAAACTTGTAAAGG
TATAGAAAGGAAAGACGGGGCAACCCCTCGAATATAAAGAAAAAAAATCT
CTCTTGGACA
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protein sequence of NO19G01150.1

>NO19G01150.1-protein ID=NO19G01150.1-protein|Name=NO19G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bp
MPASRRPVSSSYENRPRQRQGLLVMAPLLIFGFLVLFTPGAAAVKVWGLP
FANPLHWLRPGSSGTRNLQAAVRALEGELSRLRSLHSAHLEELRKLRLKR
AEDHALFRQQKREQDEKLLKIQKEAAEALALAKEKEAGVEEELENERKRW
RIEAQEAIGKAVRVAVEQEGRKRKEEVGKLESLLAARTRDDEEGKEIEEM
EEMFEKERKVFKKRLAAEREVAEEALEREEKLQQVVSALEDDNQILKNEV
GKLTMKINSSSSVPPTTAAAAAPAPAAVVPVKEEEENKGEEVVAPAAVLA
SPAATTEPVKTTQAVMPPTSPPVAGTLKVTTPSSGSISGGYSDKSCISSS
SSSSSSSSSITTTKTPAVAAPVKKLKKKVSSKSAGGRVGSGAAGAARAGA
GVSRGSGTISPPPVVKNIVPKRTVTMKKKEAAASNSSASSPSPLSSSSKA
SRPRHQPVAPSIKKGGLGTSK*
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Synonyms
Publications