NO19G01070, NO19G01070 (gene) Nannochloropsis oceanica

Overview
NameNO19G01070
Unique NameNO19G01070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length486
Alignment locationchr19:356136..356621 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein phosphatase inhibitor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:356136..356621 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0032515negative regulation of phosphoprotein phosphatase activity
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004865protein serine/threonine phosphatase inhibitor activity
GO:0030234enzyme regulator activity
Vocabulary: INTERPRO
TermDefinition
IPR011107PPI_Ypi1
Homology
BLAST of NO19G01070 vs. NCBI_GenBank
Match: KKY27379.1 (putative type 1 phosphatase regulator ypi1 [Diplodia seriata])

HSP 1 Score: 67.4 bits (163), Expect = 4.700e-8
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   37 SSTGSATVVEDKAAAKEGEGGVLRLRLHP--RPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            +S GS    E   +      G LRLR  P  R H++W E V+DNE M KKSSK CCI+HK+R FGESS
Sbjct:   17 ASNGSIVTTESGDSPLNLPSGTLRLRAEPVQRRHIQWAEDVVDNEGMGKKSSKVCCIYHKQREFGESS 84          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: XP_021337775.1 (protein phosphatase inhibitor 3 (I3) [Babesia microti strain RI] >SIO73708.1 protein phosphatase inhibitor 3 (I3) [Babesia microti strain RI])

HSP 1 Score: 67.4 bits (163), Expect = 4.700e-8
Identity = 35/71 (49.30%), Postives = 41/71 (57.75%), Query Frame = 0
Query:   32 MQAKPSSTGSATVVEDKAAAKEGEGGVLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            M    + T + T +    +A   +     LRL P  +V W E  IDNEHMNKKSSKRCCIFHKKR   ESS
Sbjct:    1 MNGNRTITTTITTISTGVSANTEDSSTQLLRLIPERNVTWAEDTIDNEHMNKKSSKRCCIFHKKRNPDESS 71          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: OMP83648.1 (Type 1 phosphatases regulator YPI1 [Diplodia seriata])

HSP 1 Score: 67.4 bits (163), Expect = 4.700e-8
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   37 SSTGSATVVEDKAAAKEGEGGVLRLRLHP--RPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            +S GS    E   +      G LRLR  P  R H++W E V+DNE M KKSSK CCI+HK+R FGESS
Sbjct:   17 ASNGSIVTTESGDSPLNLPSGTLRLRAEPVQRRHIQWAEDVVDNEGMGKKSSKVCCIYHKQREFGESS 84          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: EJK64663.1 (hypothetical protein THAOC_14580, partial [Thalassiosira oceanica])

HSP 1 Score: 67.0 bits (162), Expect = 6.100e-8
Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 0
Query:   58 VLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGES 102
            VLRL+L P+ +V W+  VIDNE + +KSSKRCCI+HK+RAFGES
Sbjct:   54 VLRLQLRPQSNVSWETDVIDNEGLGRKSSKRCCIWHKQRAFGES 97          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: EKG21413.1 (hypothetical protein MPH_01272 [Macrophomina phaseolina MS6])

HSP 1 Score: 67.0 bits (162), Expect = 6.100e-8
Identity = 36/68 (52.94%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   37 SSTGSATVVEDKAAAKEGEGGVLRLRLH--PRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            +S GS    E  A+      G LRLR     R H++W E VIDNE M KKSSK CCI+HK+R FGESS
Sbjct:   16 ASNGSIVTTEPAASPLSLPSGTLRLRAQASQRRHIQWAEDVIDNEGMGKKSSKVCCIYHKQREFGESS 83          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: EPT05475.1 (hypothetical protein FOMPIDRAFT_1021299 [Fomitopsis pinicola FP-58527 SS1])

HSP 1 Score: 67.0 bits (162), Expect = 6.100e-8
Identity = 40/86 (46.51%), Postives = 47/86 (54.65%), Query Frame = 0
Query:   25 VGGRGGHMQAKPSSTGSATVVEDKAAAKEGEG------GVLRLRLHP--RPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            V  RGG   + PS       + D    +EG G      G LRLR  P  RP V W E V+DNE M +KSSK CCI+HK +AF ESS
Sbjct:    4 VATRGGPSTSAPSDGSRTITIHDSQPGEEGAGEGGEEVGRLRLRAAPRNRPRVVWREDVVDNEGMGRKSSKICCIYHKPKAFDESS 89          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: GAN09296.1 (pheromone-regulated membrane protein [Mucor ambiguus])

HSP 1 Score: 67.0 bits (162), Expect = 6.100e-8
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   46 EDKAAAKEGEG-GVLRLR----LHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            ED  ++ +GE  GVLRLR       R  ++WDE VIDNEHMNKK +K CCI+HK  A GESS
Sbjct:   41 EDVVSSDDGENVGVLRLRGDMNARRRRVIQWDENVIDNEHMNKKKTKICCIYHKPHAIGESS 102          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: OQS04313.1 (mitogen-activated protein kinase, partial [Thraustotheca clavata])

HSP 1 Score: 66.6 bits (161), Expect = 8.000e-8
Identity = 31/71 (43.66%), Postives = 42/71 (59.15%), Query Frame = 0
Query:   32 MQAKPSSTGSATVVEDKAAAKEGEGGVLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            M     + G++  V      +  E  V+ +RL PR HV +DE  +DNE + +K S +CCIFHKKR FGESS
Sbjct:  589 MSTSAPTQGTSRAVTSLTEEETKENEVVYMRLAPRAHVTFDESAVDNEFLGRKKSNKCCIFHKKREFGESS 659          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: OAD02034.1 (hypothetical protein MUCCIDRAFT_111384 [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 66.2 bits (160), Expect = 1.000e-7
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   46 EDKAAAKEGEG-GVLRLR----LHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            ED  ++ +GE  GVLRLR       R  ++WDE VIDNEHMNKK +K CCI+HK  A GESS
Sbjct:   41 EDVVSSDDGEHVGVLRLRGDMNARRRRVIQWDENVIDNEHMNKKKTKICCIYHKPHAIGESS 102          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: XP_012895296.1 (uncharacterized protein [Blastocystis hominis] >CBK21248.2 unnamed protein product [Blastocystis hominis])

HSP 1 Score: 65.9 bits (159), Expect = 1.400e-7
Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 0
Query:   58 VLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            +  LRL  RPHV+W E  +DNEHMN+K SK+CCI+HK   FGESS
Sbjct:   48 IYELRL--RPHVRWTEDTVDNEHMNRKRSKKCCIYHKPHEFGESS 90          
The following BLAST results are available for this feature:
BLAST of NO19G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KKY27379.14.700e-851.47putative type 1 phosphatase regulator ypi1 [Diplod... [more]
XP_021337775.14.700e-849.30protein phosphatase inhibitor 3 (I3) [Babesia micr... [more]
OMP83648.14.700e-851.47Type 1 phosphatases regulator YPI1 [Diplodia seria... [more]
EJK64663.16.100e-865.91hypothetical protein THAOC_14580, partial [Thalass... [more]
EKG21413.16.100e-852.94hypothetical protein MPH_01272 [Macrophomina phase... [more]
EPT05475.16.100e-846.51hypothetical protein FOMPIDRAFT_1021299 [Fomitopsi... [more]
GAN09296.16.100e-856.45pheromone-regulated membrane protein [Mucor ambigu... [more]
OQS04313.18.000e-843.66mitogen-activated protein kinase, partial [Thraust... [more]
OAD02034.11.000e-756.45hypothetical protein MUCCIDRAFT_111384 [Mucor circ... [more]
XP_012895296.11.400e-762.22uncharacterized protein [Blastocystis hominis] >CB... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004441NSK004441Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01070.1NO19G01070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598983gene_7501Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100550g4gene6845Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01070.1NO19G01070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01070 ID=NO19G01070|Name=NO19G01070|organism=Nannochloropsis oceanica|type=gene|length=486bp
ATGGAAGCCAAGAACAGCGGTGGCCCCACCAGCCCCAACGGCGGTGGCAG
GGGCAGTGGTAGCATCGGAGTGGTGGGAGGAAGAGGTGGGCATATGCAAG
CAAAACCAAGCTCGACGGGCTCGGCGACGGTGGTGGAAGACAAGGCAGCC
GCCAAGGAAGGGGAGGGAGGAGTGCTGCGATTGCGGCTGCACCCACGGCC
GCACGTGAAGTGGGACGAGAAAGTGATAGACAATGAGCATATGAACAAGA
AGAGCAGTAAAAGATGCTGTATATTTCATAAGAAGCGGGCGTTTGGGGAA
AGTTCGAGTGAGAGCGAGAGTGAGAGTGATGATGGGGATGAGGAGAAGGG
TGGAGAACGAGGAGAGATGGGCAAAGCTGGAGGGAGAGGAGGAAAGGGTA
GGAAGGGAAAGAAAAAGGATAAGCACATGCATGTGGCCCAACCAAAGCAT
CCGCCGATCAAACCGCATGAGACCTATCATGCCTGA
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protein sequence of NO19G01070.1

>NO19G01070.1-protein ID=NO19G01070.1-protein|Name=NO19G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=162bp
MEAKNSGGPTSPNGGGRGSGSIGVVGGRGGHMQAKPSSTGSATVVEDKAA
AKEGEGGVLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGE
SSSESESESDDGDEEKGGERGEMGKAGGRGGKGRKGKKKDKHMHVAQPKH
PPIKPHETYHA*
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Synonyms
Publications